Pregenerated sensors for CCDC184 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000029875Ensembl transcript IDs: ENSMUST00000031914.6
Found 85 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | GAGCCAGCTCCTCCCAGCCTAGGGGCCCTGGGAACCCGAGTACCCTaGCTCCTAGGGCCGCAGTTCCCTCCTCAAGCTTCCTTTACCCAT | + |
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Preference number: 1 (lower is better) Translates to: EPAPPSLGALGTRVP*LLGPQFPPQASFTH Trigger: ATGGGTAAAGGAAGCTTGAGGAGGGAACTGCGGCCCTAGGAGTCAGGGTACTCGGGTTCCCAGGGCCCCTAGGCTGGGAGGAGCTGGCTC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031914.6 |
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| 3UTR TCA 90 bp | TCAGCGACGGGGCAGGCTCGGCTCTGCATGCTCAGTGCCAGAGCTTaGGCTCTTGTGTCTTCATGCACATCAGAGCCAGCTCCTCCCAGC | + |
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Preference number: 1 (lower is better) Translates to: SATGQARLCMLSARA*ALVSSCTSEPAPPS Trigger: GCTGGGAGGAGCTGGCTCTGATGTGCATGAAGACACAAGAGCTCAAGCTCTGGCACTGAGCATGCAGAGCCGAGCCTGCCCCGTCGCTGA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031914.6 |
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| 3UTR TCA 90 bp | GCACTTTGTTCTCTAGGCCCAGGTGAGTGGCCAAGCAATCCCAGGTaGAGTCAGCGACGGGGCAGGCTCGGCTCTGCATGCTCAGTGCCA | + |
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Preference number: 1 (lower is better) Translates to: ALCSLGPGEWPSNPR*SQRRGRLGSACSVP Trigger: TGGCACTGAGCATGCAGAGCCGAGCCTGCCCCGTCGCTGACTTCACCTGGGATTGCTTGGCCACTCACCTGGGCCTAGAGAACAAAGTGC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031914.6 |
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| 3UTR GCA 90 bp | CCAGGTGAAGTCAGCGACGGGGCAGGCTCGGCTCTGCATGCTCAGTaGCAGAGCTTGAGCTCTTGTGTCTTCATGCACATCAGAGCCAGC | + |
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Preference number: 1 (lower is better) Translates to: PGEVSDGAGSALHAQ*QSLSSCVFMHIRAS Trigger: GCTGGCTCTGATGTGCATGAAGACACAAGAGCTCAAGCTCTGGCACTGAGCATGCAGAGCCGAGCCTGCCCCGTCGCTGACTTCACCTGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031914.6 |
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| 3UTR CCA 90 bp | GAAGAACACTGCACCGCACTGTTCAGTCCCCTCGGGTTAAGCACTTaGAAACCCAAAGCCAGCGCGGGTAGTTGGTTCCCTGGTGGGGTC | + |
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Preference number: 1 (lower is better) Translates to: EEHCTALFSPLGLST*KPKASAGSWFPGGV Trigger: GACCCCACCAGGGAACCAACTACCCGCGCTGGCTTTGGGTTTCCAAGTGCTTAACCCGAGGGGACTGAACAGTGCGGTGCAGTGTTCTTC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000031914.6 |
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| 3UTR CCA 90 bp | AGGACACTCAGGACAGCCACATGCTCCGTGCCCTGGGTTGAGGAGTaGGGCATAAAAGGGAAAAGAGCAGAAAGCGCCATGATAGCCTGG | + |
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Preference number: 1 (lower is better) Translates to: RTLRTATCSVPWVEE*GIKGKRAESAMIAW Trigger: CCAGGCTATCATGGCGCTTTCTGCTCTTTTCCCTTTTATGCCCCACTCCTCAACCCAGGGCACGGAGCATGTGGCTGTCCTGAGTGTCCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000031914.6 |
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| 3UTR TCA 90 bp | AAATCTGGACAGTTGCTGAGCAGTCCTAAGTCTCTGCCTGCGACCTaGGCACTTTGTTCTCTAGGCCCAGGTGAGTGGCCAAGCAATCCC | + |
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Preference number: 1 (lower is better) Translates to: KSGQLLSSPKSLPAT*ALCSLGPGEWPSNP Trigger: GGGATTGCTTGGCCACTCACCTGGGCCTAGAGAACAAAGTGCTCAGGTCGCAGGCAGAGACTTAGGACTGCTCAGCAACTGTCCAGATTT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031914.6 |
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| 3UTR TCA 90 bp | TCCCCCAAGAGTTCCTCAGATGTCCCCTTAAATCTGGACAGTTGCTaGGCAGTCCTAAGTCTCTGCCTGCGACCTGAGCACTTTGTTCTC | + |
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Preference number: 1 (lower is better) Translates to: SPKSSSDVPLNLDSC*AVLSLCLRPEHFVL Trigger: GAGAACAAAGTGCTCAGGTCGCAGGCAGAGACTTAGGACTGCTCAGCAACTGTCCAGATTTAAGGGGACATCTGAGGAACTCTTGGGGGA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000031914.6 |
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| 3UTR CAA 90 bp | GTCAGCGACGGGGCAGGCTCGGCTCTGCATGCTCAGTGCCAGAGCTaGAGCTCTTGTGTCTTCATGCACATCAGAGCCAGCTCCTCCCAG | + |
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Preference number: 2 (lower is better) Translates to: VSDGAGSALHAQCQS*SSCVFMHIRASSSQ Trigger: CTGGGAGGAGCTGGCTCTGATGTGCATGAAGACACAAGAGCTCAAGCTCTGGCACTGAGCATGCAGAGCCGAGCCTGCCCCGTCGCTGAC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031914.6 |
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| 3UTR-3UTR CCA 90 bp | GAGTCCAGAGATGGGCACGTCCTTTCTGGGAACCTCACCTTTCTGCAGTTTGCTGCCAGCGCGGGTAGTTaGTTCCCTGGTGGGGTCTCC | + |
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Preference number: 2 (lower is better) Translates to: ESRDGHVLSGNLTFLQFAASAGS*FPGGVS Trigger: GGAGACCCCACCAGGGAACCAACTACCCGCGCTGGC...AGCAAACTGCAGAAAGGTGAGGTTCCCAGAAAGGACGTGCCCATCTCTGGACTC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031914.6 |
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| 3UTR-3UTR TCA 90 bp | CCCCCTGAACCTAATACTAGAGCCACAAGCCCTGCCCCTGAGGGCTCACACACTGGGAGTCTCTCTCCCTaGCCTATAAGGACCACGTTT | + |
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Preference number: 2 (lower is better) Translates to: PPEPNTRATSPAPEGSHTGSLSP*PIRTTF Trigger: AAACGTGGTCCTTATAGGTCAGGGAGAGAGACTCCC...AGTGTGTGAGCCCTCAGGGGCAGGGCTTGTGGCTCTAGTATTAGGTTCAGGGGG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000031914.6 |
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| 3UTR-3UTR TCA 90 bp | AGTGGCCAAGCAATCCCAGGTGAAGTCAGCGACGGGGCAGGCTCGGCTCTGCATTATAAGGACCACGTTTaGAGTGAAGAACACTGCACC | + |
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Preference number: 2 (lower is better) Translates to: SGQAIPGEVSDGAGSALHYKDHV*SEEHCT Trigger: GGTGCAGTGTTCTTCACTTCAAACGTGGTCCTTATA...ATGCAGAGCCGAGCCTGCCCCGTCGCTGACTTCACCTGGGATTGCTTGGCCACT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031914.6 |
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| 3UTR-3UTR TCA 90 bp | TGTCCCCTTAAATCTGGACAGTTGCTGAGCAGTCCTAAGTCTCTGCCTGCGACCTGCTTCCAAAGTCCTTaGCTCTACAAATCCTTCTGT | + |
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Preference number: 2 (lower is better) Translates to: CPLKSGQLLSSPKSLPATCFQSP*LYKSFC Trigger: ACAGAAGGATTTGTAGAGTCAAGGACTTTGGAAGCA...GGTCGCAGGCAGAGACTTAGGACTGCTCAGCAACTGTCCAGATTTAAGGGGACA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031914.6 |
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| 3UTR-3UTR CCA 90 bp | AGGAGGGAAGGGGCACACACAGTCACCACTTCGGAAGGTAGGAGCACATCAGTTACACTACTACACAAGTaGACACACATAACACAAGAC | + |
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Preference number: 2 (lower is better) Translates to: RREGAHTVTTSEGRSTSVTLLHK*THITQD Trigger: GTCTTGTGTTATGTGTGTCCACTTGTGTAGTAGTGT...AACTGATGTGCTCCTACCTTCCGAAGTGGTGACTGTGTGTGCCCCTTCCCTCCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031914.6 |
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| 3UTR-3UTR GCA 90 bp | AGGTTGACATCAAGCAAAGCACTAAGAAAGGATACACAGAGGAGGGAAGGGGCACACCTTTCTGCAGTTTaGTATGATGCCTGCTTGGGT | + |
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Preference number: 2 (lower is better) Translates to: RLTSSKALRKDTQRREGAHLSAV*YDACLG Trigger: ACCCAAGCAGGCATCATAGCAAACTGCAGAAAGGTG...TGCCCCTTCCCTCCTCTGTGTATCCTTTCTTAGTGCTTTGCTTGATGTCAACCT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031914.6 |
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| 3UTR-3UTR TCA 90 bp | GTTGCAGAGCGATCTGTAAGGGGGAGAGGTTTCCGCAGAGCACTGAATATCTTGTGCCAAAGTCCTAGATaGCTCCTTTTTCAGAATAGA | + |
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Preference number: 2 (lower is better) Translates to: VAERSVRGRGFRRALNILCQSPR*LLFQNR Trigger: TCTATTCTGAAAAAGGAGTCATCTAGGACTTTGGCA...CAAGATATTCAGTGCTCTGCGGAAACCTCTCCCCCTTACAGATCGCTCTGCAAC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000031914.6 |
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| 3UTR-3UTR CCA 90 bp | GTTGCAGAGCGATCTGTAAGGGGGAGAGGTTTCCGCAGAGCACTGAATATCTTGATTTACATAATTCAATaGTCCTCCTGTTTCCTAGGA | + |
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Preference number: 2 (lower is better) Translates to: VAERSVRGRGFRRALNILIYIIQ*SSCFLG Trigger: TCCTAGGAAACAGGAGGACCATTGAATTATGTAAAT...CAAGATATTCAGTGCTCTGCGGAAACCTCTCCCCCTTACAGATCGCTCTGCAAC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000031914.6 |
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| 3UTR-3UTR TCA 90 bp | GATGGTGCCTTTTTATTAAGGTTGACATCAAGCAAAGCACTAAGAAAGGATACATTCTGCAGTTTGCTATaGTGCCTGCTTGGGTGGAAT | + |
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Preference number: 2 (lower is better) Translates to: DGAFLLRLTSSKALRKDTFCSLL*CLLGWN Trigger: ATTCCACCCAAGCAGGCATCATAGCAAACTGCAGAA...TGTATCCTTTCTTAGTGCTTTGCTTGATGTCAACCTTAATAAAAAGGCACCATC 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000031914.6 |
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| 3UTR TCA 72 bp | CCTCCCAGCCTAGGGGCCCTGGGAACCCGAGTACCCTaGCTCCTAGGGCCGCAGTTCCCTCCTCAAGCTTCC | + |
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Preference number: 3 (lower is better) Translates to: PPSLGALGTRVP*LLGPQFPPQAS Trigger: GGAAGCTTGAGGAGGGAACTGCGGCCCTAGGAGTCAGGGTACTCGGGTTCCCAGGGCCCCTAGGCTGGGAGG 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031914.6 |
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| 3UTR TCA 72 bp | TCTCTAGGCCCAGGTGAGTGGCCAAGCAATCCCAGGTaGAGTCAGCGACGGGGCAGGCTCGGCTCTGCATGC | + |
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Preference number: 3 (lower is better) Translates to: SLGPGEWPSNPR*SQRRGRLGSAC Trigger: GCATGCAGAGCCGAGCCTGCCCCGTCGCTGACTTCACCTGGGATTGCTTGGCCACTCACCTGGGCCTAGAGA 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031914.6 |
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| 3UTR TCA 72 bp | GCCTGCGACCTGAGCACTTTGTTCTCTAGGCCCAGGTaGGTGGCCAAGCAATCCCAGGTGAAGTCAGCGACG | + |
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Preference number: 3 (lower is better) Translates to: ACDLSTLFSRPR*VAKQSQVKSAT Trigger: CGTCGCTGACTTCACCTGGGATTGCTTGGCCACTCACCTGGGCCTAGAGAACAAAGTGCTCAGGTCGCAGGC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031914.6 |
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| 3UTR GCA 72 bp | GTCAGCGACGGGGCAGGCTCGGCTCTGCATGCTCAGTaGCAGAGCTTGAGCTCTTGTGTCTTCATGCACATC | + |
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Preference number: 3 (lower is better) Translates to: VSDGAGSALHAQ*QSLSSCVFMHI Trigger: GATGTGCATGAAGACACAAGAGCTCAAGCTCTGGCACTGAGCATGCAGAGCCGAGCCTGCCCCGTCGCTGAC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031914.6 |
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| 3UTR TCA 72 bp | GGGCAGGCTCGGCTCTGCATGCTCAGTGCCAGAGCTTaGGCTCTTGTGTCTTCATGCACATCAGAGCCAGCT | + |
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Preference number: 3 (lower is better) Translates to: GQARLCMLSARA*ALVSSCTSEPA Trigger: AGCTGGCTCTGATGTGCATGAAGACACAAGAGCTCAAGCTCTGGCACTGAGCATGCAGAGCCGAGCCTGCCC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031914.6 |
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| 3UTR CCA 72 bp | TGCACCGCACTGTTCAGTCCCCTCGGGTTAAGCACTTaGAAACCCAAAGCCAGCGCGGGTAGTTGGTTCCCT | + |
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Preference number: 3 (lower is better) Translates to: CTALFSPLGLST*KPKASAGSWFP Trigger: AGGGAACCAACTACCCGCGCTGGCTTTGGGTTTCCAAGTGCTTAACCCGAGGGGACTGAACAGTGCGGTGCA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031914.6 |
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| 3UTR TCA 72 bp | CAGTTGCTGAGCAGTCCTAAGTCTCTGCCTGCGACCTaGGCACTTTGTTCTCTAGGCCCAGGTGAGTGGCCA | + |
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Preference number: 3 (lower is better) Translates to: QLLSSPKSLPAT*ALCSLGPGEWP Trigger: TGGCCACTCACCTGGGCCTAGAGAACAAAGTGCTCAGGTCGCAGGCAGAGACTTAGGACTGCTCAGCAACTG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031914.6 |
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| 3UTR GCA 72 bp | GGAGCACATCAGTTAAGGACACTCAGGACAGCCACATaGTCCGTGCCCTGGGTTGAGGAGTGGGGCATAAAA | + |
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Preference number: 3 (lower is better) Translates to: GAHQLRTLRTAT*SVPWVEEWGIK Trigger: TTTTATGCCCCACTCCTCAACCCAGGGCACGGAGCATGTGGCTGTCCTGAGTGTCCTTAACTGATGTGCTCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031914.6 |
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| 3UTR-3UTR CAA 90 bp | AGTGGCCAAGCAATCCCAGGTGAAGTCAGCGACGGGGCAGGCTCGGCTCTGCATATGCTTCCAAAGTCCTaGACTCTACAAATCCTTCTG | + |
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Preference number: 3 (lower is better) Translates to: SGQAIPGEVSDGAGSALHMLPKS*TLQILL Trigger: CAGAAGGATTTGTAGAGTCAAGGACTTTGGAAGCAT...ATGCAGAGCCGAGCCTGCCCCGTCGCTGACTTCACCTGGGATTGCTTGGCCACT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031914.6 |
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| 3UTR-3UTR CAA 90 bp | GTAGGAGCACATCAGTTAAGGACACTCAGGACAGCCACATGCTCCGTGCCCTGGCCAGAGCTTGAGCTCTaGTGTCTTCATGCACATCAG | + |
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Preference number: 3 (lower is better) Translates to: VGAHQLRTLRTATCSVPWPELEL*CLHAHQ Trigger: CTGATGTGCATGAAGACACAAGAGCTCAAGCTCTGG...CCAGGGCACGGAGCATGTGGCTGTCCTGAGTGTCCTTAACTGATGTGCTCCTAC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031914.6 |
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| 3UTR GCA 72 bp | AGTTCCCTCCTCAAGCTTCCTTTACCCATCAGCAGTTaGAGAGCGATCTGTAAGGGGGAGAGGTTTCCGCAG | + |
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Preference number: 3 (lower is better) Translates to: SSLLKLPLPISS*RAICKGERFPQ Trigger: CTGCGGAAACCTCTCCCCCTTACAGATCGCTCTGCAACTGCTGATGGGTAAAGGAAGCTTGAGGAGGGAACT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000031914.6 |
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| 3UTR-3UTR CAA 90 bp | TGTCCCCTTAAATCTGGACAGTTGCTGAGCAGTCCTAAGTCTCTGCCTGCGACCGCTCAGTGCCAGAGCTaGAGCTCTTGTGTCTTCATG | + |
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Preference number: 3 (lower is better) Translates to: CPLKSGQLLSSPKSLPATAQCQS*SSCVFM Trigger: CATGAAGACACAAGAGCTCAAGCTCTGGCACTGAGC...GGTCGCAGGCAGAGACTTAGGACTGCTCAGCAACTGTCCAGATTTAAGGGGACA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031914.6 |
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| 3UTR-3UTR CAA 90 bp | CCCCCTGAACCTAATACTAGAGCCACAAGCCCTGCCCCTGAGGGCTCACACACTCTTAAATCTGGACAGTaGCTGAGCAGTCCTAAGTCT | + |
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Preference number: 3 (lower is better) Translates to: PPEPNTRATSPAPEGSHTLKSGQ*LSSPKS Trigger: AGACTTAGGACTGCTCAGCAACTGTCCAGATTTAAG...AGTGTGTGAGCCCTCAGGGGCAGGGCTTGTGGCTCTAGTATTAGGTTCAGGGGG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000031914.6 |
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| 3UTR TCA 72 bp | AGGGAGTCTCTCTCCCTGACCTATAAGGACCACGTTTaGAGTGAAGAACACTGCACCGCACTGTTCAGTCCC | + |
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Preference number: 3 (lower is better) Translates to: RESLSLTYKDHV*SEEHCTALFSP Trigger: GGGACTGAACAGTGCGGTGCAGTGTTCTTCACTTCAAACGTGGTCCTTATAGGTCAGGGAGAGAGACTCCCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031914.6 |
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| 3UTR TCA 72 bp | AGTTCCTCAGATGTCCCCTTAAATCTGGACAGTTGCTaGGCAGTCCTAAGTCTCTGCCTGCGACCTGAGCAC | + |
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Preference number: 3 (lower is better) Translates to: SSSDVPLNLDSC*AVLSLCLRPEH Trigger: GTGCTCAGGTCGCAGGCAGAGACTTAGGACTGCTCAGCAACTGTCCAGATTTAAGGGGACATCTGAGGAACT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031914.6 |
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| 3UTR GCA 72 bp | GCACGTCCTTTCTGGGAACCTCACCTTTCTGCAGTTTaGTATGATGCCTGCTTGGGTGGAATTCGCGATGCT | + |
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Preference number: 3 (lower is better) Translates to: ARPFWEPHLSAV*YDACLGGIRDA Trigger: AGCATCGCGAATTCCACCCAAGCAGGCATCATAGCAAACTGCAGAAAGGTGAGGTTCCCAGAAAGGACGTGC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031914.6 |
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| 3UTR CCA 72 bp | GCCCTGCCCCTGAGGGCTCACACACTACTACACAAGTaGACACACATAACACAAGACATTATGGAGGCAACA | + |
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Preference number: 3 (lower is better) Translates to: ALPLRAHTLLHK*THITQDIMEAT Trigger: TGTTGCCTCCATAATGTCTTGTGTTATGTGTGTCCACTTGTGTAGTAGTGTGTGAGCCCTCAGGGGCAGGGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031914.6 |
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| 3UTR TCA 72 bp | TCCTTTCTGGGAACCTCACCTTTCTGCAGTTTGCTATaGTGCCTGCTTGGGTGGAATTCGCGATGCTTCCAA | + |
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Preference number: 3 (lower is better) Translates to: SFLGTSPFCSLL*CLLGWNSRCFQ Trigger: TTGGAAGCATCGCGAATTCCACCCAAGCAGGCATCATAGCAAACTGCAGAAAGGTGAGGTTCCCAGAAAGGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031914.6 |
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| 3UTR-3UTR CAA 90 bp | AGGTTGACATCAAGCAAAGCACTAAGAAAGGATACACAGAGGAGGGAAGGGGCAAGGGTAAATTTCCTGTaGCCAGAACAGAATACCCCA | + |
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Preference number: 3 (lower is better) Translates to: RLTSSKALRKDTQRREGARVNFL*PEQNTP Trigger: TGGGGTATTCTGTTCTGGCAACAGGAAATTTACCCT...TGCCCCTTCCCTCCTCTGTGTATCCTTTCTTAGTGCTTTGCTTGATGTCAACCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000031914.6 |
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| CDS-3UTR CCA 90 bp | GTGGCCAAGCAATCCCAGGTGAAGTCAGCGACGGGGCAGGCTCGGCTCTGCATGCACCTCCAGAGGCGCTaGCATGTCGCCGCCGTCCTT | + |
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Preference number: 4 (lower is better) Translates to: VAKQSQVKSATGQARLCMHLQRR*HVAAVL Trigger: AAGGACGGCGGCGACATGCCAGCGCCTCTGGAGGTG...CATGCAGAGCCGAGCCTGCCCCGTCGCTGACTTCACCTGGGATTGCTTGGCCAC 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031914.6 |
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| CDS-3UTR CCA 90 bp | AGTGGCCAAGCAATCCCAGGTGAAGTCAGCGACGGGGCAGGCTCGGCTCTGCATACGCCCAAGCCTCCCTaGCGGGGCGCAGTGGTCATA | + |
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Preference number: 4 (lower is better) Translates to: SGQAIPGEVSDGAGSALHTPKPP*RGAVVI Trigger: TATGACCACTGCGCCCCGCCAGGGAGGCTTGGGCGT...ATGCAGAGCCGAGCCTGCCCCGTCGCTGACTTCACCTGGGATTGCTTGGCCACT 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000031914.6 |
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| CDS-3UTR CCA 90 bp | GTGGCCAAGCAATCCCAGGTGAAGTCAGCGACGGGGCAGGCTCGGCTCTGCATGTTCATGGGGAACACTTaGGAAGCTCCCCTTGCCGCC | + |
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Preference number: 4 (lower is better) Translates to: VAKQSQVKSATGQARLCMFMGNT*EAPLAA Trigger: GGCGGCAAGGGGAGCTTCCCAAGTGTTCCCCATGAA...CATGCAGAGCCGAGCCTGCCCCGTCGCTGACTTCACCTGGGATTGCTTGGCCAC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000031914.6 |
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| CDS-3UTR TCA 90 bp | GAAGAACACTGCACCGCACTGTTCAGTCCCCTCGGGTTAAGCACTTGGAAACCCTCAGAGAGCTCGCAGTaGCTGGTGGGTGTGGCGGGG | + |
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Preference number: 4 (lower is better) Translates to: EEHCTALFSPLGLSTWKPSESSQ*LVGVAG Trigger: CCCCGCCACACCCACCAGTCACTGCGAGCTCTCTGA...GGGTTTCCAAGTGCTTAACCCGAGGGGACTGAACAGTGCGGTGCAGTGTTCTTC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031914.6 |
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| CDS-3UTR GCA 90 bp | CTTCCTTTACCCATCAGCAGTTGCAGAGCGATCTGTAAGGGGGAGAGGTTTCCGGGCCTGCTCGTCCAGTaGCCCTCGCATGGCCCTCAC | + |
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Preference number: 4 (lower is better) Translates to: LPLPISSCRAICKGERFPGLLVQ*PSHGPH Trigger: GTGAGGGCCATGCGAGGGGCACTGGACGAGCAGGCC...CGGAAACCTCTCCCCCTTACAGATCGCTCTGCAACTGCTGATGGGTAAAGGAAG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000031914.6 |
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| CDS-3UTR GCA 90 bp | GAAGAACACTGCACCGCACTGTTCAGTCCCCTCGGGTTAAGCACTTGGAAACCCTGGATGTGCGAGGCCTaGTCGTCCAGTGCCCCTCGC | + |
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Preference number: 4 (lower is better) Translates to: EEHCTALFSPLGLSTWKPWMCEA*SSSAPR Trigger: GCGAGGGGCACTGGACGAGCAGGCCTCGCACATCCA...GGGTTTCCAAGTGCTTAACCCGAGGGGACTGAACAGTGCGGTGCAGTGTTCTTC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000031914.6 |
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| CDS-3UTR CCA 90 bp | GTTGCAGAGCGATCTGTAAGGGGGAGAGGTTTCCGCAGAGCACTGAATATCTTGCCACGGCGGGCACCGTaGACACCTCCAGAGGCGCTG | + |
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Preference number: 4 (lower is better) Translates to: VAERSVRGRGFRRALNILPRRAP*TPPEAL Trigger: CAGCGCCTCTGGAGGTGTCCACGGTGCCCGCCGTGG...CAAGATATTCAGTGCTCTGCGGAAACCTCTCCCCCTTACAGATCGCTCTGCAAC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000031914.6 |
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| CDS-3UTR CCA 90 bp | CCCCCTGAACCTAATACTAGAGCCACAAGCCCTGCCCCTGAGGGCTCACACACTAACAGGGCCTGCAGCTaGGCCTTCAGGTGCTCCATC | + |
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Preference number: 4 (lower is better) Translates to: PPEPNTRATSPAPEGSHTNRACS*AFRCSI Trigger: GATGGAGCACCTGAAGGCCCAGCTGCAGGCCCTGTT...AGTGTGTGAGCCCTCAGGGGCAGGGCTTGTGGCTCTAGTATTAGGTTCAGGGGG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000031914.6 |
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| 3UTR CAA 72 bp | GGGGCAGGCTCGGCTCTGCATGCTCAGTGCCAGAGCTaGAGCTCTTGTGTCTTCATGCACATCAGAGCCAGC | + |
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Preference number: 4 (lower is better) Translates to: GAGSALHAQCQS*SSCVFMHIRAS Trigger: GCTGGCTCTGATGTGCATGAAGACACAAGAGCTCAAGCTCTGGCACTGAGCATGCAGAGCCGAGCCTGCCCC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031914.6 |
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| CDS-3UTR GCA 90 bp | ATGAGAGTCCAGAGATGGGCACGTCCTTTCTGGGAACCTCACCTTTCTGCAGTTTTGGGAAGCTCCCCTTaGCGCCGGCCACGCCCAAGC | + |
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Preference number: 4 (lower is better) Translates to: MRVQRWARPFWEPHLSAVLGSSP*RRPRPS Trigger: GCTTGGGCGTGGCCGGCGGCAAGGGGAGCTTCCCAA...AACTGCAGAAAGGTGAGGTTCCCAGAAAGGACGTGCCCATCTCTGGACTCTCAT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000031914.6 |
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| CDS-3UTR CCA 90 bp | CACTGCACCGCACTGTTCAGTCCCCTCGGGTTAAGCACTTGGAAACCCAAAGCCCCAGTGCCCCTCGCATaGCCCTCACGTCCTCAAACA | + |
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Preference number: 4 (lower is better) Translates to: HCTALFSPLGLSTWKPKAPVPLA*PSRPQT Trigger: TGTTTGAGGACGTGAGGGCCATGCGAGGGGCACTGG...GGCTTTGGGTTTCCAAGTGCTTAACCCGAGGGGACTGAACAGTGCGGTGCAGTG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000031914.6 |
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| CDS-3UTR CCA 90 bp | CACTGCACCGCACTGTTCAGTCCCCTCGGGTTAAGCACTTGGAAACCCAAAGCCTCGTCCGACAGAACCTaGATGTGCGAGGCCTGCTCG | + |
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Preference number: 4 (lower is better) Translates to: HCTALFSPLGLSTWKPKASSDRT*MCEACS Trigger: CGAGCAGGCCTCGCACATCCAGGTTCTGTCGGACGA...GGCTTTGGGTTTCCAAGTGCTTAACCCGAGGGGACTGAACAGTGCGGTGCAGTG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031914.6 |
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| CDS-3UTR CCA 90 bp | CACTGCACCGCACTGTTCAGTCCCCTCGGGTTAAGCACTTGGAAACCCAAAGCCGAGACTATAGCCCGCTaGTTGGCGCACACGTCGTCC | + |
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Preference number: 4 (lower is better) Translates to: HCTALFSPLGLSTWKPKAETIAR*LAHTSS Trigger: GGACGACGTGTGCGCCAACCAGCGGGCTATAGTCTC...GGCTTTGGGTTTCCAAGTGCTTAACCCGAGGGGACTGAACAGTGCGGTGCAGTG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031914.6 |
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| CDS-3UTR TCA 90 bp | CACTGCACCGCACTGTTCAGTCCCCTCGGGTTAAGCACTTGGAAACCCAAAGCCCGCCGTCCTTGGTCATaGTCTCCAGCAGACTGTCCT | + |
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Preference number: 4 (lower is better) Translates to: HCTALFSPLGLSTWKPKARRPWS*SPADCP Trigger: AGGACAGTCTGCTGGAGATCATGACCAAGGACGGCG...GGCTTTGGGTTTCCAAGTGCTTAACCCGAGGGGACTGAACAGTGCGGTGCAGTG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031914.6 |
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| CDS-3UTR GCA 90 bp | AGCAGTTGCAGAGCGATCTGTAAGGGGGAGAGGTTTCCGCAGAGCACTGAATATGCCTCGCCCTCCAGCTaGAGCAGGGTAATGTCAGGA | + |
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Preference number: 4 (lower is better) Translates to: SSCRAICKGERFPQSTEYASPSS*SRVMSG Trigger: TCCTGACATTACCCTGCTGCAGCTGGAGGGCGAGGC...ATATTCAGTGCTCTGCGGAAACCTCTCCCCCTTACAGATCGCTCTGCAACTGCT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000031914.6 |
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| CDS-3UTR CCA 90 bp | CTTCCTTTACCCATCAGCAGTTGCAGAGCGATCTGTAAGGGGGAGAGGTTTCCGGGTGTCTCTGGTTCATaGGGAACACTTGGGAAGCTC | + |
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Preference number: 4 (lower is better) Translates to: LPLPISSCRAICKGERFPGVSGS*GTLGKL Trigger: GAGCTTCCCAAGTGTTCCCCATGAACCAGAGACACC...CGGAAACCTCTCCCCCTTACAGATCGCTCTGCAACTGCTGATGGGTAAAGGAAG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000031914.6 |
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| CDS CCA 90 bp | CGCCGTTATACTCCCCAGAGATCACGTCCCCCACGGCGGGCACCGTaGACACCTCCAGAGGCGCTGGCATGTCGCCGCCGTCCTTGGTCA | + |
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Preference number: 5 (lower is better) Translates to: RRYTPQRSRPPRRAP*TPPEALACRRRPWS Trigger: TGACCAAGGACGGCGGCGACATGCCAGCGCCTCTGGAGGTGTCCACGGTGCCCGCCGTGGGGGACGTGATCTCTGGGGAGTATAACGGCG 68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000031914.6 |
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| CDS GCA 90 bp | ATAGCCCGCTGGTTGGCGCACACGTCGTCCGACAGAACCTGGATGTaGGAGGCCTGCTCGTCCAGTGCCCCTCGCATGGCCCTCACGTCC | + |
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Preference number: 5 (lower is better) Translates to: IARWLAHTSSDRTWM*EACSSSAPRMALTS Trigger: GGACGTGAGGGCCATGCGAGGGGCACTGGACGAGCAGGCCTCGCACATCCAGGTTCTGTCGGACGACGTGTGCGCCAACCAGCGGGCTAT 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031914.6 |
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| CDS CCA 90 bp | GATCACGTCCCCCACGGCGGGCACCGTGGACACCTCCAGAGGCGCTaGCATGTCGCCGCCGTCCTTGGTCATGATCTCCAGCAGACTGTC | + |
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Preference number: 5 (lower is better) Translates to: DHVPHGGHRGHLQRR*HVAAVLGHDLQQTV Trigger: GACAGTCTGCTGGAGATCATGACCAAGGACGGCGGCGACATGCCAGCGCCTCTGGAGGTGTCCACGGTGCCCGCCGTGGGGGACGTGATC 67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000031914.6 |
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| CDS CCA 90 bp | GTCCTCGATCCCAGGCGAAGGTGTCTCTGGTTCATGGGGAACACTTaGGAAGCTCCCCTTGCCGCCGGCCACGCCCAAGCCTCCCTGGCG | + |
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Preference number: 5 (lower is better) Translates to: VLDPRRRCLWFMGNT*EAPLAAGHAQASLA Trigger: CGCCAGGGAGGCTTGGGCGTGGCCGGCGGCAAGGGGAGCTTCCCAAGTGTTCCCCATGAACCAGAGACACCTTCGCCTGGGATCGAGGAC 67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000031914.6 |
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| CDS GCA 90 bp | CACGTCGTCCGACAGAACCTGGATGTGCGAGGCCTGCTCGTCCAGTaGCCCTCGCATGGCCCTCACGTCCTCAAACAGGGCCTGCAGCTG | + |
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Preference number: 5 (lower is better) Translates to: HVVRQNLDVRGLLVQ*PSHGPHVLKQGLQL Trigger: CAGCTGCAGGCCCTGTTTGAGGACGTGAGGGCCATGCGAGGGGCACTGGACGAGCAGGCCTCGCACATCCAGGTTCTGTCGGACGACGTG 66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031914.6 |
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| CDS CCA 90 bp | GAGACTATAGCCCGCTGGTTGGCGCACACGTCGTCCGACAGAACCTaGATGTGCGAGGCCTGCTCGTCCAGTGCCCCTCGCATGGCCCTC | + |
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Preference number: 5 (lower is better) Translates to: ETIARWLAHTSSDRT*MCEACSSSAPRMAL Trigger: GAGGGCCATGCGAGGGGCACTGGACGAGCAGGCCTCGCACATCCAGGTTCTGTCGGACGACGTGTGCGCCAACCAGCGGGCTATAGTCTC 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031914.6 |
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| CDS GCA 90 bp | TGGTTGGCGCACACGTCGTCCGACAGAACCTGGATGTGCGAGGCCTaGTCGTCCAGTGCCCCTCGCATGGCCCTCACGTCCTCAAACAGG | + |
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Preference number: 5 (lower is better) Translates to: WLAHTSSDRTWMCEA*SSSAPRMALTSSNR Trigger: CCTGTTTGAGGACGTGAGGGCCATGCGAGGGGCACTGGACGAGCAGGCCTCGCACATCCAGGTTCTGTCGGACGACGTGTGCGCCAACCA 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031914.6 |
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| CDS CCA 90 bp | ACAGAACCTGGATGTGCGAGGCCTGCTCGTCCAGTGCCCCTCGCATaGCCCTCACGTCCTCAAACAGGGCCTGCAGCTGGGCCTTCAGGT | + |
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Preference number: 5 (lower is better) Translates to: TEPGCARPARPVPLA*PSRPQTGPAAGPSG Trigger: ACCTGAAGGCCCAGCTGCAGGCCCTGTTTGAGGACGTGAGGGCCATGCGAGGGGCACTGGACGAGCAGGCCTCGCACATCCAGGTTCTGT 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031914.6 |
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| CDS CCA 90 bp | ACACTTGGGAAGCTCCCCTTGCCGCCGGCCACGCCCAAGCCTCCCTaGCGGGGCGCAGTGGTCATAATCTGGCACATGGAGACTATAGCC | + |
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Preference number: 5 (lower is better) Translates to: TLGKLPLPPATPKPP*RGAVVIIWHMETIA Trigger: GGCTATAGTCTCCATGTGCCAGATTATGACCACTGCGCCCCGCCAGGGAGGCTTGGGCGTGGCCGGCGGCAAGGGGAGCTTCCCAAGTGT 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000031914.6 |
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| CDS CCA 90 bp | AGCAAGCCGCTGTCCTCGATCCCAGGCGAAGGTGTCTCTGGTTCATaGGGAACACTTGGGAAGCTCCCCTTGCCGCCGGCCACGCCCAAG | + |
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Preference number: 5 (lower is better) Translates to: SKPLSSIPGEGVSGS*GTLGKLPLPPATPK Trigger: CTTGGGCGTGGCCGGCGGCAAGGGGAGCTTCCCAAGTGTTCCCCATGAACCAGAGACACCTTCGCCTGGGATCGAGGACAGCGGCTTGCT 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031914.6 |
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| CDS CCA 90 bp | ACGACCCAGCAAGCCGCTGTCCTCGATCCCAGGCGAAGGTGTCTCTaGTTCATGGGGAACACTTGGGAAGCTCCCCTTGCCGCCGGCCAC | + |
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Preference number: 5 (lower is better) Translates to: TTQQAAVLDPRRRCL*FMGNTWEAPLAAGH Trigger: GTGGCCGGCGGCAAGGGGAGCTTCCCAAGTGTTCCCCATGAACCAGAGACACCTTCGCCTGGGATCGAGGACAGCGGCTTGCTGGGTCGT 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000031914.6 |
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| CDS-3UTR CAA 90 bp | CACTGCACCGCACTGTTCAGTCCCCTCGGGTTAAGCACTTGGAAACCCAAAGCCCTTGGGAAGCTCCCCTaGCCGCCGGCCACGCCCAAG | + |
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Preference number: 5 (lower is better) Translates to: HCTALFSPLGLSTWKPKALGKLP*PPATPK Trigger: CTTGGGCGTGGCCGGCGGCAAGGGGAGCTTCCCAAG...GGCTTTGGGTTTCCAAGTGCTTAACCCGAGGGGACTGAACAGTGCGGTGCAGTG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000031914.6 |
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| CDS CCA 90 bp | CGGGGCGCAGTGGTCATAATCTGGCACATGGAGACTATAGCCCGCTaGTTGGCGCACACGTCGTCCGACAGAACCTGGATGTGCGAGGCC | + |
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Preference number: 5 (lower is better) Translates to: RGAVVIIWHMETIAR*LAHTSSDRTWMCEA Trigger: GGCCTCGCACATCCAGGTTCTGTCGGACGACGTGTGCGCCAACCAGCGGGCTATAGTCTCCATGTGCCAGATTATGACCACTGCGCCCCG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031914.6 |
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| CDS CCA 90 bp | AGTGCCCCTCGCATGGCCCTCACGTCCTCAAACAGGGCCTGCAGCTaGGCCTTCAGGTGCTCCATCAGTTCCTTCATACCGCCGTTATAC | + |
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Preference number: 5 (lower is better) Translates to: SAPRMALTSSNRACS*AFRCSISSFIPPLY Trigger: GTATAACGGCGGTATGAAGGAACTGATGGAGCACCTGAAGGCCCAGCTGCAGGCCCTGTTTGAGGACGTGAGGGCCATGCGAGGGGCACT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031914.6 |
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| CDS-3UTR CAA 90 bp | CAGAGGAGGGAAGGGGCACACACAGTCACCACTTCGGAAGGTAGGAGCACATCAACTATAGCCCGCTGGTaGGCGCACACGTCGTCCGAC | + |
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Preference number: 5 (lower is better) Translates to: QRREGAHTVTTSEGRSTSTIARW*AHTSSD Trigger: GTCGGACGACGTGTGCGCCAACCAGCGGGCTATAGT...TGATGTGCTCCTACCTTCCGAAGTGGTGACTGTGTGTGCCCCTTCCCTCCTCTG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031914.6 |
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| CDS-3UTR CAA 90 bp | GAAGAACACTGCACCGCACTGTTCAGTCCCCTCGGGTTAAGCACTTGGAAACCCGTTCATGGGGAACACTaGGGAAGCTCCCCTTGCCGC | + |
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Preference number: 5 (lower is better) Translates to: EEHCTALFSPLGLSTWKPVHGEH*GSSPCR Trigger: GCGGCAAGGGGAGCTTCCCAAGTGTTCCCCATGAAC...GGGTTTCCAAGTGCTTAACCCGAGGGGACTGAACAGTGCGGTGCAGTGTTCTTC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000031914.6 |
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| CDS-3UTR CAA 90 bp | GAGTCCAGAGATGGGCACGTCCTTTCTGGGAACCTCACCTTTCTGCAGTTTGCTATGTCGCCGCCGTCCTaGGTCATGATCTCCAGCAGA | + |
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Preference number: 5 (lower is better) Translates to: ESRDGHVLSGNLTFLQFAMSPPS*VMISSR Trigger: TCTGCTGGAGATCATGACCAAGGACGGCGGCGACAT...AGCAAACTGCAGAAAGGTGAGGTTCCCAGAAAGGACGTGCCCATCTCTGGACTC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031914.6 |
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| CDS CCA 72 bp | ACTCCCCAGAGATCACGTCCCCCACGGCGGGCACCGTaGACACCTCCAGAGGCGCTGGCATGTCGCCGCCGT | + |
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Preference number: 6 (lower is better) Translates to: TPQRSRPPRRAP*TPPEALACRRR Trigger: ACGGCGGCGACATGCCAGCGCCTCTGGAGGTGTCCACGGTGCCCGCCGTGGGGGACGTGATCTCTGGGGAGT 71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000031914.6 |
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| CDS CCA 72 bp | CCCCACGGCGGGCACCGTGGACACCTCCAGAGGCGCTaGCATGTCGCCGCCGTCCTTGGTCATGATCTCCAG | + |
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Preference number: 6 (lower is better) Translates to: PHGGHRGHLQRR*HVAAVLGHDLQ Trigger: CTGGAGATCATGACCAAGGACGGCGGCGACATGCCAGCGCCTCTGGAGGTGTCCACGGTGCCCGCCGTGGGG 69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031914.6 |
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| CDS CCA 72 bp | GCCCGCTGGTTGGCGCACACGTCGTCCGACAGAACCTaGATGTGCGAGGCCTGCTCGTCCAGTGCCCCTCGC | + |
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Preference number: 6 (lower is better) Translates to: ARWLAHTSSDRT*MCEACSSSAPR Trigger: GCGAGGGGCACTGGACGAGCAGGCCTCGCACATCCAGGTTCTGTCGGACGACGTGTGCGCCAACCAGCGGGC 69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031914.6 |
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| CDS CCA 72 bp | GGATGTGCGAGGCCTGCTCGTCCAGTGCCCCTCGCATaGCCCTCACGTCCTCAAACAGGGCCTGCAGCTGGG | + |
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Preference number: 6 (lower is better) Translates to: GCARPARPVPLA*PSRPQTGPAAG Trigger: CCCAGCTGCAGGCCCTGTTTGAGGACGTGAGGGCCATGCGAGGGGCACTGGACGAGCAGGCCTCGCACATCC 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031914.6 |
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| CDS CCA 72 bp | AAGCTCCCCTTGCCGCCGGCCACGCCCAAGCCTCCCTaGCGGGGCGCAGTGGTCATAATCTGGCACATGGAG | + |
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Preference number: 6 (lower is better) Translates to: KLPLPPATPKPP*RGAVVIIWHME Trigger: CTCCATGTGCCAGATTATGACCACTGCGCCCCGCCAGGGAGGCTTGGGCGTGGCCGGCGGCAAGGGGAGCTT 68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000031914.6 |
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| CDS GCA 72 bp | CACACGTCGTCCGACAGAACCTGGATGTGCGAGGCCTaGTCGTCCAGTGCCCCTCGCATGGCCCTCACGTCC | + |
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Preference number: 6 (lower is better) Translates to: HTSSDRTWMCEA*SSSAPRMALTS Trigger: GGACGTGAGGGCCATGCGAGGGGCACTGGACGAGCAGGCCTCGCACATCCAGGTTCTGTCGGACGACGTGTG 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031914.6 |
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| CDS CCA 72 bp | CCCAGGCGAAGGTGTCTCTGGTTCATGGGGAACACTTaGGAAGCTCCCCTTGCCGCCGGCCACGCCCAAGCC | + |
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Preference number: 6 (lower is better) Translates to: PRRRCLWFMGNT*EAPLAAGHAQA Trigger: GGCTTGGGCGTGGCCGGCGGCAAGGGGAGCTTCCCAAGTGTTCCCCATGAACCAGAGACACCTTCGCCTGGG 67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000031914.6 |
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| CDS CAA 90 bp | TGTCCTCGATCCCAGGCGAAGGTGTCTCTGGTTCATGGGGAACACTaGGGAAGCTCCCCTTGCCGCCGGCCACGCCCAAGCCTCCCTGGC | + |
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Preference number: 6 (lower is better) Translates to: CPRSQAKVSLVHGEH*GSSPCRRPRPSLPG Trigger: GCCAGGGAGGCTTGGGCGTGGCCGGCGGCAAGGGGAGCTTCCCAAGTGTTCCCCATGAACCAGAGACACCTTCGCCTGGGATCGAGGACA 66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000031914.6 |
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| CDS GCA 72 bp | CGACAGAACCTGGATGTGCGAGGCCTGCTCGTCCAGTaGCCCTCGCATGGCCCTCACGTCCTCAAACAGGGC | + |
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Preference number: 6 (lower is better) Translates to: RQNLDVRGLLVQ*PSHGPHVLKQG Trigger: GCCCTGTTTGAGGACGTGAGGGCCATGCGAGGGGCACTGGACGAGCAGGCCTCGCACATCCAGGTTCTGTCG 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031914.6 |
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| CDS CAA 72 bp | TCCCAGGCGAAGGTGTCTCTGGTTCATGGGGAACACTaGGGAAGCTCCCCTTGCCGCCGGCCACGCCCAAGC | + |
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Preference number: 6 (lower is better) Translates to: SQAKVSLVHGEH*GSSPCRRPRPS Trigger: GCTTGGGCGTGGCCGGCGGCAAGGGGAGCTTCCCAAGTGTTCCCCATGAACCAGAGACACCTTCGCCTGGGA 65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000031914.6 |
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| CDS CCA 72 bp | CTGTCCTCGATCCCAGGCGAAGGTGTCTCTGGTTCATaGGGAACACTTGGGAAGCTCCCCTTGCCGCCGGCC | + |
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Preference number: 6 (lower is better) Translates to: LSSIPGEGVSGS*GTLGKLPLPPA Trigger: GGCCGGCGGCAAGGGGAGCTTCCCAAGTGTTCCCCATGAACCAGAGACACCTTCGCCTGGGATCGAGGACAG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031914.6 |
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| CDS CAA 90 bp | GGCGCAGTGGTCATAATCTGGCACATGGAGACTATAGCCCGCTGGTaGGCGCACACGTCGTCCGACAGAACCTGGATGTGCGAGGCCTGC | + |
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Preference number: 6 (lower is better) Translates to: GAVVIIWHMETIARW*AHTSSDRTWMCEAC Trigger: GCAGGCCTCGCACATCCAGGTTCTGTCGGACGACGTGTGCGCCAACCAGCGGGCTATAGTCTCCATGTGCCAGATTATGACCACTGCGCC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031914.6 |
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| CDS CCA 72 bp | CAAGCCGCTGTCCTCGATCCCAGGCGAAGGTGTCTCTaGTTCATGGGGAACACTTGGGAAGCTCCCCTTGCC | + |
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Preference number: 6 (lower is better) Translates to: QAAVLDPRRRCL*FMGNTWEAPLA Trigger: GGCAAGGGGAGCTTCCCAAGTGTTCCCCATGAACCAGAGACACCTTCGCCTGGGATCGAGGACAGCGGCTTG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000031914.6 |
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| CDS CCA 72 bp | GTGGTCATAATCTGGCACATGGAGACTATAGCCCGCTaGTTGGCGCACACGTCGTCCGACAGAACCTGGATG | + |
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Preference number: 6 (lower is better) Translates to: VVIIWHMETIAR*LAHTSSDRTWM Trigger: CATCCAGGTTCTGTCGGACGACGTGTGCGCCAACCAGCGGGCTATAGTCTCCATGTGCCAGATTATGACCAC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031914.6 |
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| CDS CAA 72 bp | GTCATAATCTGGCACATGGAGACTATAGCCCGCTGGTaGGCGCACACGTCGTCCGACAGAACCTGGATGTGC | + |
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Preference number: 6 (lower is better) Translates to: VIIWHMETIARW*AHTSSDRTWMC Trigger: GCACATCCAGGTTCTGTCGGACGACGTGTGCGCCAACCAGCGGGCTATAGTCTCCATGTGCCAGATTATGAC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031914.6 |
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