Pregenerated sensors for CCDC178 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000024306Ensembl transcript IDs: ENSMUST00000025160.9, ENSMUST00000115837.3, ENSMUST00000234661.2, ENSMUST00000234736.2
Found 193 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | ACTGACTCACAAAGCCTTTATTTGGGCCAACACGGTGGGGAAATCTaGGGAAGCCAGCAGTCACTGTCAACACCGCCAGTAATTATTCTC | + |
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Preference number: 1 (lower is better) Translates to: TDSQSLYLGQHGGEI*GSQQSLSTPPVIIL Trigger: GAGAATAATTACTGGCGGTGTTGACAGTGACTGCTGGCTTCCCCAGATTTCCCCACCGTGTTGGCCCAAATAAAGGCTTTGTGAGTCAGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000025160.9 ENSMUST00000234736.2 |
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| 3UTR TCA 90 bp | TATGGATTTGCTGTAAGTAAGAGAGTGGCAAAGCATGCTGGGAGGTaGGAGTTTTTCGTCCATGGAAGTGTGAAATGGCAAACAGGTGAA | + |
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Preference number: 1 (lower is better) Translates to: YGFAVSKRVAKHAGR*EFFVHGSVKWQTGE Trigger: TTCACCTGTTTGCCATTTCACACTTCCATGGACGAAAAACTCTCACCTCCCAGCATGCTTTGCCACTCTCTTACTTACAGCAAATCCATA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000025160.9 ENSMUST00000115837.3 ENSMUST00000234736.2 |
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| 3UTR TCA 90 bp | AAGCCAATTGCAATCAGTCACCCAGAGCTGAAATTAGATCGTTCCTaGCAGCGGCATGAAAGTCACCTGTTTCATTGTTATGGATTTGCT | + |
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Preference number: 1 (lower is better) Translates to: KPIAISHPELKLDRS*QRHESHLFHCYGFA Trigger: AGCAAATCCATAACAATGAAACAGGTGACTTTCATGCCGCTGTCAGGAACGATCTAATTTCAGCTCTGGGTGACTGATTGCAATTGGCTT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000025160.9 ENSMUST00000234736.2 |
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| 3UTR GCA 90 bp | AAATGGCAAACAGGTGAATGTCCAATTACACTGTTATCTGAACTGTaGGACTTTTCCTGTCTTTTATTTCAGCTTCCGAGATACATTGGT | + |
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Preference number: 1 (lower is better) Translates to: KWQTGECPITLLSEL*DFSCLLFQLPRYIG Trigger: ACCAATGTATCTCGGAAGCTGAAATAAAAGACAGGAAAAGTCGCACAGTTCAGATAACAGTGTAATTGGACATTCACCTGTTTGCCATTT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000025160.9 ENSMUST00000115837.3 ENSMUST00000234736.2 |
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| 3UTR CAA 90 bp | TTACAGTTTACACAAACTTTAAGTACTGACTCACAAAGCCTTTATTaGGGCCAACACGGTGGGGAAATCTGGGGAAGCCAGCAGTCACTG | + |
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Preference number: 2 (lower is better) Translates to: LQFTQTLSTDSQSLY*GQHGGEIWGSQQSL Trigger: CAGTGACTGCTGGCTTCCCCAGATTTCCCCACCGTGTTGGCCCAAATAAAGGCTTTGTGAGTCAGTACTTAAAGTTTGTGTAAACTGTAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000025160.9 ENSMUST00000234736.2 |
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| 3UTR-3UTR TCA 90 bp | GGAAATCTGGGGAAGCCAGCAGTCACTGTCAACACCGCCAGTAATTATTCTCTCGAAATGGCAAACAGGTaGATGTCCAATTACACTGTT | + |
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Preference number: 2 (lower is better) Translates to: GNLGKPAVTVNTASNYSLEMANR*MSNYTV Trigger: AACAGTGTAATTGGACATTCACCTGTTTGCCATTTC...GAGAGAATAATTACTGGCGGTGTTGACAGTGACTGCTGGCTTCCCCAGATTTCC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000025160.9 ENSMUST00000234736.2 |
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| 3UTR-3UTR TCA 90 bp | TCAGATGAGGCAAAGCCAATTGCAATCAGTCACCCAGAGCTGAAATTAGATCGTTCGTCCATGGAAGTGTaGAATGGCAAACAGGTGAAT | + |
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Preference number: 2 (lower is better) Translates to: SDEAKPIAISHPELKLDRSSMEV*NGKQVN Trigger: ATTCACCTGTTTGCCATTTCACACTTCCATGGACGA...ACGATCTAATTTCAGCTCTGGGTGACTGATTGCAATTGGCTTTGCCTCATCTGA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000025160.9 ENSMUST00000234736.2 |
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| 3UTR-3UTR GCA 90 bp | GCCAATTGCAATCAGTCACCCAGAGCTGAAATTAGATCGTTCCTGACAGCGGCACTGTTATCTGAACTGTaGGACTTTTCCTGTCTTTTA | + |
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Preference number: 2 (lower is better) Translates to: ANCNQSPRAEIRSFLTAALLSEL*DFSCLL Trigger: TAAAAGACAGGAAAAGTCGCACAGTTCAGATAACAG...TGCCGCTGTCAGGAACGATCTAATTTCAGCTCTGGGTGACTGATTGCAATTGGC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000025160.9 ENSMUST00000234736.2 |
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| 3UTR-3UTR GCA 90 bp | GGAAATCTGGGGAAGCCAGCAGTCACTGTCAACACCGCCAGTAATTATTCTCTCCTGTTATCTGAACTGTaGGACTTTTCCTGTCTTTTA | + |
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Preference number: 2 (lower is better) Translates to: GNLGKPAVTVNTASNYSLLLSEL*DFSCLL Trigger: TAAAAGACAGGAAAAGTCGCACAGTTCAGATAACAG...GAGAGAATAATTACTGGCGGTGTTGACAGTGACTGCTGGCTTCCCCAGATTTCC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000025160.9 ENSMUST00000234736.2 |
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| 3UTR-3UTR TCA 90 bp | GAGCATCTAAGGGTGTCACATGGGTATAGGCACTGTTACAGTTTACACAAACTTTCGTCCATGGAAGTGTaGAATGGCAAACAGGTGAAT | + |
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Preference number: 2 (lower is better) Translates to: EHLRVSHGYRHCYSLHKLSSMEV*NGKQVN Trigger: ATTCACCTGTTTGCCATTTCACACTTCCATGGACGA...AAGTTTGTGTAAACTGTAACAGTGCCTATACCCATGTGACACCCTTAGATGCTC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000025160.9 ENSMUST00000234736.2 |
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| 3UTR-3UTR TCA 90 bp | GCAGTCACTGTCAACACCGCCAGTAATTATTCTCTCTTCCAATTAATGGTGACAAAATTAGATCGTTCCTaGCAGCGGCATGAAAGTCAC | + |
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Preference number: 2 (lower is better) Translates to: AVTVNTASNYSLFQLMVTKLDRS*QRHESH Trigger: GTGACTTTCATGCCGCTGTCAGGAACGATCTAATTT...TGTCACCATTAATTGGAAGAGAGAATAATTACTGGCGGTGTTGACAGTGACTGC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000025160.9 ENSMUST00000234736.2 |
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| 3UTR-3UTR TCA 90 bp | CCAGCAGTCACTGTCAACACCGCCAGTAATTATTCTCTCTTCCAATTAATGGTGGAAATGGCAAACAGGTaGATGTCCAATTACACTGTT | + |
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Preference number: 2 (lower is better) Translates to: PAVTVNTASNYSLFQLMVEMANR*MSNYTV Trigger: AACAGTGTAATTGGACATTCACCTGTTTGCCATTTC...CACCATTAATTGGAAGAGAGAATAATTACTGGCGGTGTTGACAGTGACTGCTGG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000025160.9 ENSMUST00000234736.2 |
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| 3UTR-3UTR CCA 90 bp | GAGCATCTAAGGGTGTCACATGGGTATAGGCACTGTTACAGTTTACACAAACTTAGAGTTTTTCGTCCATaGAAGTGTGAAATGGCAAAC | + |
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Preference number: 2 (lower is better) Translates to: EHLRVSHGYRHCYSLHKLRVFRP*KCEMAN Trigger: GTTTGCCATTTCACACTTCCATGGACGAAAAACTCT...AAGTTTGTGTAAACTGTAACAGTGCCTATACCCATGTGACACCCTTAGATGCTC 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000025160.9 ENSMUST00000234736.2 |
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| 3UTR CCA 72 bp | CAAAGCCTTTATTTGGGCCAACACGGTGGGGAAATCTaGGGAAGCCAGCAGTCACTGTCAACACCGCCAGTA | + |
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Preference number: 3 (lower is better) Translates to: QSLYLGQHGGEI*GSQQSLSTPPV Trigger: TACTGGCGGTGTTGACAGTGACTGCTGGCTTCCCCAGATTTCCCCACCGTGTTGGCCCAAATAAAGGCTTTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000025160.9 ENSMUST00000234736.2 |
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| 3UTR TCA 72 bp | ATGCTGGGAGGTGAGAGTTTTTCGTCCATGGAAGTGTaGAATGGCAAACAGGTGAATGTCCAATTACACTGT | + |
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Preference number: 3 (lower is better) Translates to: MLGGESFSSMEV*NGKQVNVQLHC Trigger: ACAGTGTAATTGGACATTCACCTGTTTGCCATTTCACACTTCCATGGACGAAAAACTCTCACCTCCCAGCAT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000025160.9 ENSMUST00000115837.3 ENSMUST00000234736.2 |
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| 3UTR TCA 72 bp | GCAATCAGTCACCCAGAGCTGAAATTAGATCGTTCCTaGCAGCGGCATGAAAGTCACCTGTTTCATTGTTAT | + |
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Preference number: 3 (lower is better) Translates to: AISHPELKLDRS*QRHESHLFHCY Trigger: ATAACAATGAAACAGGTGACTTTCATGCCGCTGTCAGGAACGATCTAATTTCAGCTCTGGGTGACTGATTGC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000025160.9 ENSMUST00000234736.2 |
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| CDS-3UTR TCA 90 bp | GCCAATTGCAATCAGTCACCCAGAGCTGAAATTAGATCGTTCCTGACAGCGGCAACTGCTTCTCTCTCATaGGATGGTCGTACACACCGT | + |
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Preference number: 4 (lower is better) Translates to: ANCNQSPRAEIRSFLTAATASLS*DGRTHR Trigger: ACGGTGTGTACGACCATCTCATGAGAGAGAAGCAGT...TGCCGCTGTCAGGAACGATCTAATTTCAGCTCTGGGTGACTGATTGCAATTGGC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000025160.9 ENSMUST00000234736.2 |
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| CDS-3UTR TCA 90 bp | GGAAATCTGGGGAAGCCAGCAGTCACTGTCAACACCGCCAGTAATTATTCTCTCGCCGACTTGGGTAGCTaGAGTAGATGGCTTTATTCA | + |
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Preference number: 4 (lower is better) Translates to: GNLGKPAVTVNTASNYSLADLGS*SRWLYS Trigger: TGAATAAAGCCATCTACTTCAGCTACCCAAGTCGGC...GAGAGAATAATTACTGGCGGTGTTGACAGTGACTGCTGGCTTCCCCAGATTTCC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000025160.9 ENSMUST00000234736.2 |
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| CDS-3UTR TCA 90 bp | GCCAATTGCAATCAGTCACCCAGAGCTGAAATTAGATCGTTCCTGACAGCGGCACGATGTCCCCTCTTGTaGGCTTCTTCAGAAGTTCTT | + |
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Preference number: 4 (lower is better) Translates to: ANCNQSPRAEIRSFLTAARCPLL*ASSEVL Trigger: AAGAACTTCTGAAGAAGCTCACAAGAGGGGACATCG...TGCCGCTGTCAGGAACGATCTAATTTCAGCTCTGGGTGACTGATTGCAATTGGC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000025160.9 ENSMUST00000234736.2 |
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| CDS-3UTR CCA 90 bp | GGAAATCTGGGGAAGCCAGCAGTCACTGTCAACACCGCCAGTAATTATTCTCTCGGTAGTAGGTTGAGCTaGCTCTTTCTCGTTTTCTGG | + |
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Preference number: 4 (lower is better) Translates to: GNLGKPAVTVNTASNYSLGSRLS*LFLVFW Trigger: CCAGAAAACGAGAAAGAGCCAGCTCAACCTACTACC...GAGAGAATAATTACTGGCGGTGTTGACAGTGACTGCTGGCTTCCCCAGATTTCC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000025160.9 ENSMUST00000234736.2 |
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| CDS-3UTR GCA 90 bp | GCCAATTGCAATCAGTCACCCAGAGCTGAAATTAGATCGTTCCTGACAGCGGCAAGTCGGAAGTATTCTTaGCATTTCTGGTCCAGCCTT | + |
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Preference number: 4 (lower is better) Translates to: ANCNQSPRAEIRSFLTAASRKYS*HFWSSL Trigger: AAGGCTGGACCAGAAATGGCAAGAATACTTCCGACT...TGCCGCTGTCAGGAACGATCTAATTTCAGCTCTGGGTGACTGATTGCAATTGGC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000025160.9 ENSMUST00000234736.2 |
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| 3UTR CAA 72 bp | ACACAAACTTTAAGTACTGACTCACAAAGCCTTTATTaGGGCCAACACGGTGGGGAAATCTGGGGAAGCCAG | + |
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Preference number: 4 (lower is better) Translates to: TQTLSTDSQSLY*GQHGGEIWGSQ Trigger: CTGGCTTCCCCAGATTTCCCCACCGTGTTGGCCCAAATAAAGGCTTTGTGAGTCAGTACTTAAAGTTTGTGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000025160.9 ENSMUST00000234736.2 |
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| CDS-3UTR TCA 90 bp | AAGCCAGCAGTCACTGTCAACACCGCCAGTAATTATTCTCTCTTCCAATTAATGGCATACAGCCTTTTCTaGATCTCAATCCCTGTGGCG | + |
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Preference number: 4 (lower is better) Translates to: KPAVTVNTASNYSLFQLMAYSLF*ISIPVA Trigger: CGCCACAGGGATTGAGATTCAGAAAAGGCTGTATGC...CATTAATTGGAAGAGAGAATAATTACTGGCGGTGTTGACAGTGACTGCTGGCTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000025160.9 ENSMUST00000234736.2 |
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| CDS-3UTR TCA 90 bp | TGGCAAACAGGTGAATGTCCAATTACACTGTTATCTGAACTGTGCGACTTTTCCACTGCTTCTCTCTCATaGGATGGTCGTACACACCGT | + |
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Preference number: 4 (lower is better) Translates to: WQTGECPITLLSELCDFSTASLS*DGRTHR Trigger: ACGGTGTGTACGACCATCTCATGAGAGAGAAGCAGT...GGAAAAGTCGCACAGTTCAGATAACAGTGTAATTGGACATTCACCTGTTTGCCA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000025160.9 ENSMUST00000115837.3 ENSMUST00000234736.2 |
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| CDS-3UTR TCA 90 bp | GGAAATCTGGGGAAGCCAGCAGTCACTGTCAACACCGCCAGTAATTATTCTCTCACAGCTAATATTTTCTaGATGCTGTTCTGGGAGTCT | + |
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Preference number: 4 (lower is better) Translates to: GNLGKPAVTVNTASNYSLTANIF*MLFWES Trigger: AGACTCCCAGAACAGCATTCAGAAAATATTAGCTGT...GAGAGAATAATTACTGGCGGTGTTGACAGTGACTGCTGGCTTCCCCAGATTTCC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000025160.9 ENSMUST00000234736.2 |
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| CDS-3UTR CCA 90 bp | GCCAATTGCAATCAGTCACCCAGAGCTGAAATTAGATCGTTCCTGACAGCGGCAACAAGCCTTGCATTCTaGCATTTTCTGCAAGCATTA | + |
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Preference number: 4 (lower is better) Translates to: ANCNQSPRAEIRSFLTAATSLAF*HFLQAL Trigger: TAATGCTTGCAGAAAATGCCAGAATGCAAGGCTTGT...TGCCGCTGTCAGGAACGATCTAATTTCAGCTCTGGGTGACTGATTGCAATTGGC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000025160.9 ENSMUST00000234736.2 |
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| CDS-3UTR CCA 90 bp | GGAAATCTGGGGAAGCCAGCAGTCACTGTCAACACCGCCAGTAATTATTCTCTCCTTGGAGCTTCCAAATaGACCAAGAGTCAATTTTCA | + |
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Preference number: 4 (lower is better) Translates to: GNLGKPAVTVNTASNYSLLGASK*TKSQFS Trigger: TGAAAATTGACTCTTGGTCCATTTGGAAGCTCCAAG...GAGAGAATAATTACTGGCGGTGTTGACAGTGACTGCTGGCTTCCCCAGATTTCC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000025160.9 ENSMUST00000234736.2 |
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| CDS-3UTR TCA 90 bp | GTCCATGGAAGTGTGAAATGGCAAACAGGTGAATGTCCAATTACACTGTTATCTGCATACAGCCTTTTCTaGATCTCAATCCCTGTGGCG | + |
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Preference number: 4 (lower is better) Translates to: VHGSVKWQTGECPITLLSAYSLF*ISIPVA Trigger: CGCCACAGGGATTGAGATTCAGAAAAGGCTGTATGC...AGATAACAGTGTAATTGGACATTCACCTGTTTGCCATTTCACACTTCCATGGAC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000025160.9 ENSMUST00000115837.3 ENSMUST00000234736.2 |
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| CDS-3UTR TCA 90 bp | AGTGTGAAATGGCAAACAGGTGAATGTCCAATTACACTGTTATCTGAACTGTGCGCATACAGCCTTTTCTaGATCTCAATCCCTGTGGCG | + |
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Preference number: 4 (lower is better) Translates to: SVKWQTGECPITLLSELCAYSLF*ISIPVA Trigger: CGCCACAGGGATTGAGATTCAGAAAAGGCTGTATGC...GCACAGTTCAGATAACAGTGTAATTGGACATTCACCTGTTTGCCATTTCACACT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000025160.9 ENSMUST00000115837.3 ENSMUST00000234736.2 |
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| CDS-3UTR TCA 90 bp | GCCAATTGCAATCAGTCACCCAGAGCTGAAATTAGATCGTTCCTGACAGCGGCATGCATCTCAATAAACTaGGTTTCTTCAATGGCATAC | + |
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Preference number: 4 (lower is better) Translates to: ANCNQSPRAEIRSFLTAACISIN*VSSMAY Trigger: GTATGCCATTGAAGAAACTCAGTTTATTGAGATGCA...TGCCGCTGTCAGGAACGATCTAATTTCAGCTCTGGGTGACTGATTGCAATTGGC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000025160.9 ENSMUST00000234736.2 |
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| CDS-3UTR TCA 90 bp | ACAGGTGAATGTCCAATTACACTGTTATCTGAACTGTGCGACTTTTCCTGTCTTACTGCTTCTCTCTCATaGGATGGTCGTACACACCGT | + |
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Preference number: 4 (lower is better) Translates to: TGECPITLLSELCDFSCLTASLS*DGRTHR Trigger: ACGGTGTGTACGACCATCTCATGAGAGAGAAGCAGT...AAGACAGGAAAAGTCGCACAGTTCAGATAACAGTGTAATTGGACATTCACCTGT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000025160.9 ENSMUST00000115837.3 ENSMUST00000234736.2 |
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| CDS-3UTR GCA 90 bp | CCAGCAGTCACTGTCAACACCGCCAGTAATTATTCTCTCTTCCAATTAATGGTGTGCTCCCTGTCAAATTaGAGCTTGAAGAACTCTTCC | + |
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Preference number: 4 (lower is better) Translates to: PAVTVNTASNYSLFQLMVCSLSN*SLKNSS Trigger: GGAAGAGTTCTTCAAGCTGCAATTTGACAGGGAGCA...CACCATTAATTGGAAGAGAGAATAATTACTGGCGGTGTTGACAGTGACTGCTGG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000025160.9 ENSMUST00000234736.2 |
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| CDS-3UTR CCA 90 bp | TCAGATGAGGCAAAGCCAATTGCAATCAGTCACCCAGAGCTGAAATTAGATCGTGCTAATGGGAGTTCTTaGAGCTTCCAAATGGACCAA | + |
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Preference number: 4 (lower is better) Translates to: SDEAKPIAISHPELKLDRANGSS*SFQMDQ Trigger: TTGGTCCATTTGGAAGCTCCAAGAACTCCCATTAGC...ACGATCTAATTTCAGCTCTGGGTGACTGATTGCAATTGGCTTTGCCTCATCTGA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000025160.9 ENSMUST00000234736.2 |
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| CDS-3UTR CCA 90 bp | GGAAATCTGGGGAAGCCAGCAGTCACTGTCAACACCGCCAGTAATTATTCTCTCCGCTTTGATATTCTTTaGCTAAACGCAGGTTTTCTT | + |
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Preference number: 4 (lower is better) Translates to: GNLGKPAVTVNTASNYSLRFDIL*LNAGFL Trigger: AAGAAAACCTGCGTTTAGCCAAAGAATATCAAAGCG...GAGAGAATAATTACTGGCGGTGTTGACAGTGACTGCTGGCTTCCCCAGATTTCC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000025160.9 ENSMUST00000234736.2 |
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| CDS-3UTR TCA 90 bp | ACAGGTGAATGTCCAATTACACTGTTATCTGAACTGTGCGACTTTTCCTGTCTTGCCGACTTGGGTAGCTaGAGTAGATGGCTTTATTCA | + |
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Preference number: 4 (lower is better) Translates to: TGECPITLLSELCDFSCLADLGS*SRWLYS Trigger: TGAATAAAGCCATCTACTTCAGCTACCCAAGTCGGC...AAGACAGGAAAAGTCGCACAGTTCAGATAACAGTGTAATTGGACATTCACCTGT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000025160.9 ENSMUST00000115837.3 ENSMUST00000234736.2 |
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| CDS-3UTR TCA 90 bp | ACAGGTGAATGTCCAATTACACTGTTATCTGAACTGTGCGACTTTTCCTGTCTTCGATGTCCCCTCTTGTaGGCTTCTTCAGAAGTTCTT | + |
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Preference number: 4 (lower is better) Translates to: TGECPITLLSELCDFSCLRCPLL*ASSEVL Trigger: AAGAACTTCTGAAGAAGCTCACAAGAGGGGACATCG...AAGACAGGAAAAGTCGCACAGTTCAGATAACAGTGTAATTGGACATTCACCTGT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000025160.9 ENSMUST00000115837.3 ENSMUST00000234736.2 |
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| CDS-3UTR TCA 90 bp | CAAACAGGTGAATGTCCAATTACACTGTTATCTGAACTGTGCGACTTTTCCTGTCGATGTCCCCTCTTGTaGGCTTCTTCAGAAGTTCTT | + |
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Preference number: 4 (lower is better) Translates to: QTGECPITLLSELCDFSCRCPLL*ASSEVL Trigger: AAGAACTTCTGAAGAAGCTCACAAGAGGGGACATCG...ACAGGAAAAGTCGCACAGTTCAGATAACAGTGTAATTGGACATTCACCTGTTTG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000025160.9 ENSMUST00000115837.3 ENSMUST00000234736.2 |
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| CDS-3UTR TCA 90 bp | TCAGATGAGGCAAAGCCAATTGCAATCAGTCACCCAGAGCTGAAATTAGATCGTTGTCAAATTGCAGCTTaGAGAACTCTTCCTGCAACT | + |
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Preference number: 4 (lower is better) Translates to: SDEAKPIAISHPELKLDRCQIAA*RTLPAT Trigger: AGTTGCAGGAAGAGTTCTTCAAGCTGCAATTTGACA...ACGATCTAATTTCAGCTCTGGGTGACTGATTGCAATTGGCTTTGCCTCATCTGA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000025160.9 ENSMUST00000234736.2 |
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| CDS-3UTR TCA 90 bp | CCAGCAGTCACTGTCAACACCGCCAGTAATTATTCTCTCTTCCAATTAATGGTGTGTCAAATTGCAGCTTaGAGAACTCTTCCTGCAACT | + |
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Preference number: 4 (lower is better) Translates to: PAVTVNTASNYSLFQLMVCQIAA*RTLPAT Trigger: AGTTGCAGGAAGAGTTCTTCAAGCTGCAATTTGACA...CACCATTAATTGGAAGAGAGAATAATTACTGGCGGTGTTGACAGTGACTGCTGG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000025160.9 ENSMUST00000234736.2 |
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| CDS-3UTR GCA 90 bp | CCAGCAGTCACTGTCAACACCGCCAGTAATTATTCTCTCTTCCAATTAATGGTGCCAGTTCATTTGTTGTaGTCTGTGTTTCTCTCAGCA | + |
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Preference number: 4 (lower is better) Translates to: PAVTVNTASNYSLFQLMVPVHLL*SVFLSA Trigger: TGCTGAGAGAAACACAGAGCACAACAAATGAACTGG...CACCATTAATTGGAAGAGAGAATAATTACTGGCGGTGTTGACAGTGACTGCTGG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000025160.9 ENSMUST00000234736.2 |
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| CDS-3UTR GCA 90 bp | TGGCAAACAGGTGAATGTCCAATTACACTGTTATCTGAACTGTGCGACTTTTCCTGCTCCCTGTCAAATTaGAGCTTGAAGAACTCTTCC | + |
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Preference number: 4 (lower is better) Translates to: WQTGECPITLLSELCDFSCSLSN*SLKNSS Trigger: GGAAGAGTTCTTCAAGCTGCAATTTGACAGGGAGCA...GGAAAAGTCGCACAGTTCAGATAACAGTGTAATTGGACATTCACCTGTTTGCCA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000025160.9 ENSMUST00000115837.3 ENSMUST00000234736.2 |
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| CDS-3UTR GCA 90 bp | GGCAAACAGGTGAATGTCCAATTACACTGTTATCTGAACTGTGCGACTTTTCCTCTCTCTTCACAGTACTaGTTCTCTCTCATGAGATGG | + |
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Preference number: 4 (lower is better) Translates to: GKQVNVQLHCYLNCATFPLSSQY*FSLMRW Trigger: CCATCTCATGAGAGAGAAGCAGTACTGTGAAGAGAG...AGGAAAAGTCGCACAGTTCAGATAACAGTGTAATTGGACATTCACCTGTTTGCC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000025160.9 ENSMUST00000115837.3 ENSMUST00000234736.2 |
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| CDS-3UTR CCA 90 bp | GGAAGTGTGAAATGGCAAACAGGTGAATGTCCAATTACACTGTTATCTGAACTGGGTAGTAGGTTGAGCTaGCTCTTTCTCGTTTTCTGG | + |
|
Preference number: 4 (lower is better) Translates to: GSVKWQTGECPITLLSELGSRLS*LFLVFW Trigger: CCAGAAAACGAGAAAGAGCCAGCTCAACCTACTACC...CAGTTCAGATAACAGTGTAATTGGACATTCACCTGTTTGCCATTTCACACTTCC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000025160.9 ENSMUST00000115837.3 ENSMUST00000234736.2 |
||
| CDS-3UTR CCA 90 bp | TGGCAAACAGGTGAATGTCCAATTACACTGTTATCTGAACTGTGCGACTTTTCCGCTAATGGGAGTTCTTaGAGCTTCCAAATGGACCAA | + |
|
Preference number: 4 (lower is better) Translates to: WQTGECPITLLSELCDFSANGSS*SFQMDQ Trigger: TTGGTCCATTTGGAAGCTCCAAGAACTCCCATTAGC...GGAAAAGTCGCACAGTTCAGATAACAGTGTAATTGGACATTCACCTGTTTGCCA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000025160.9 ENSMUST00000115837.3 ENSMUST00000234736.2 |
||
| CDS-3UTR GCA 90 bp | TCAGATGAGGCAAAGCCAATTGCAATCAGTCACCCAGAGCTGAAATTAGATCGTTTTACCTGTATCAAGTaGATCCTCATTGGTAGTAGG | + |
|
Preference number: 4 (lower is better) Translates to: SDEAKPIAISHPELKLDRFTCIK*ILIGSR Trigger: CCTACTACCAATGAGGATGCACTTGATACAGGTAAA...ACGATCTAATTTCAGCTCTGGGTGACTGATTGCAATTGGCTTTGCCTCATCTGA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000025160.9 ENSMUST00000234736.2 |
||
| CDS-3UTR GCA 90 bp | TGGCAAACAGGTGAATGTCCAATTACACTGTTATCTGAACTGTGCGACTTTTCCAGAGACGTCCAAACCTaGCTCTTTATCTTTTGTGAC | + |
|
Preference number: 4 (lower is better) Translates to: WQTGECPITLLSELCDFSRDVQT*LFIFCD Trigger: GTCACAAAAGATAAAGAGGCAGGTTTGGACGTCTCT...GGAAAAGTCGCACAGTTCAGATAACAGTGTAATTGGACATTCACCTGTTTGCCA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000025160.9 ENSMUST00000115837.3 ENSMUST00000234736.2 |
||
| CDS-3UTR GCA 90 bp | TTTTTCGTCCATGGAAGTGTGAAATGGCAAACAGGTGAATGTCCAATTACACTGAGCTTGTTCTGCTTCTaGTCTGTCAGTTTCCAGACT | + |
|
Preference number: 4 (lower is better) Translates to: FFVHGSVKWQTGECPITLSLFCF*SVSFQT Trigger: AGTCTGGAAACTGACAGAGCAGAAGCAGAACAAGCT...CAGTGTAATTGGACATTCACCTGTTTGCCATTTCACACTTCCATGGACGAAAAA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000025160.9 ENSMUST00000115837.3 ENSMUST00000234736.2 |
||
| CDS-3UTR GCA 90 bp | AGTGTGAAATGGCAAACAGGTGAATGTCCAATTACACTGTTATCTGAACTGTGCAGCTTGTTCTGCTTCTaGTCTGTCAGTTTCCAGACT | + |
|
Preference number: 4 (lower is better) Translates to: SVKWQTGECPITLLSELCSLFCF*SVSFQT Trigger: AGTCTGGAAACTGACAGAGCAGAAGCAGAACAAGCT...GCACAGTTCAGATAACAGTGTAATTGGACATTCACCTGTTTGCCATTTCACACT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000025160.9 ENSMUST00000115837.3 ENSMUST00000234736.2 |
||
| CDS-3UTR GCA 90 bp | GGCAAACAGGTGAATGTCCAATTACACTGTTATCTGAACTGTGCGACTTTTCCTCCAGTTCATTTGTTGTaGTCTGTGTTTCTCTCAGCA | + |
|
Preference number: 4 (lower is better) Translates to: GKQVNVQLHCYLNCATFPPVHLL*SVFLSA Trigger: TGCTGAGAGAAACACAGAGCACAACAAATGAACTGG...AGGAAAAGTCGCACAGTTCAGATAACAGTGTAATTGGACATTCACCTGTTTGCC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000025160.9 ENSMUST00000115837.3 ENSMUST00000234736.2 |
||
| CDS-3UTR GCA 90 bp | ACAGGTGAATGTCCAATTACACTGTTATCTGAACTGTGCGACTTTTCCTGTCTTTGCTCCCTGTCAAATTaGAGCTTGAAGAACTCTTCC | + |
|
Preference number: 4 (lower is better) Translates to: TGECPITLLSELCDFSCLCSLSN*SLKNSS Trigger: GGAAGAGTTCTTCAAGCTGCAATTTGACAGGGAGCA...AAGACAGGAAAAGTCGCACAGTTCAGATAACAGTGTAATTGGACATTCACCTGT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000025160.9 ENSMUST00000115837.3 ENSMUST00000234736.2 |
||
| CDS-3UTR GCA 90 bp | GGAAGTGTGAAATGGCAAACAGGTGAATGTCCAATTACACTGTTATCTGAACTGCTCTCTTCACAGTACTaGTTCTCTCTCATGAGATGG | + |
|
Preference number: 4 (lower is better) Translates to: GSVKWQTGECPITLLSELLSSQY*FSLMRW Trigger: CCATCTCATGAGAGAGAAGCAGTACTGTGAAGAGAG...CAGTTCAGATAACAGTGTAATTGGACATTCACCTGTTTGCCATTTCACACTTCC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000025160.9 ENSMUST00000115837.3 ENSMUST00000234736.2 |
||
| CDS-3UTR GCA 90 bp | GTCCATGGAAGTGTGAAATGGCAAACAGGTGAATGTCCAATTACACTGTTATCTAGTCGGAAGTATTCTTaGCATTTCTGGTCCAGCCTT | + |
|
Preference number: 4 (lower is better) Translates to: VHGSVKWQTGECPITLLSSRKYS*HFWSSL Trigger: AAGGCTGGACCAGAAATGGCAAGAATACTTCCGACT...AGATAACAGTGTAATTGGACATTCACCTGTTTGCCATTTCACACTTCCATGGAC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000025160.9 ENSMUST00000115837.3 ENSMUST00000234736.2 |
||
| CDS-3UTR GCA 90 bp | AGTGTGAAATGGCAAACAGGTGAATGTCCAATTACACTGTTATCTGAACTGTGCAGTCGGAAGTATTCTTaGCATTTCTGGTCCAGCCTT | + |
|
Preference number: 4 (lower is better) Translates to: SVKWQTGECPITLLSELCSRKYS*HFWSSL Trigger: AAGGCTGGACCAGAAATGGCAAGAATACTTCCGACT...GCACAGTTCAGATAACAGTGTAATTGGACATTCACCTGTTTGCCATTTCACACT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000025160.9 ENSMUST00000115837.3 ENSMUST00000234736.2 |
||
| CDS-3UTR GCA 90 bp | TCAGATGAGGCAAAGCCAATTGCAATCAGTCACCCAGAGCTGAAATTAGATCGTCTAATATTTTCTGAATaGTGTTCTGGGAGTCTCCCT | + |
|
Preference number: 4 (lower is better) Translates to: SDEAKPIAISHPELKLDRLIFSE*CSGSLP Trigger: AGGGAGACTCCCAGAACAGCATTCAGAAAATATTAG...ACGATCTAATTTCAGCTCTGGGTGACTGATTGCAATTGGCTTTGCCTCATCTGA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000025160.9 ENSMUST00000234736.2 |
||
| CDS-3UTR CCA 90 bp | GGCAAACAGGTGAATGTCCAATTACACTGTTATCTGAACTGTGCGACTTTTCCTATCCTTTCCTTTTTCTaGGTGGACTTGTTTCTCTGG | + |
|
Preference number: 4 (lower is better) Translates to: GKQVNVQLHCYLNCATFPILSFF*VDLFLW Trigger: CCAGAGAAACAAGTCCACCCAGAAAAAGGAAAGGAT...AGGAAAAGTCGCACAGTTCAGATAACAGTGTAATTGGACATTCACCTGTTTGCC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000025160.9 ENSMUST00000115837.3 ENSMUST00000234736.2 |
||
| CDS-3UTR CCA 90 bp | CCAGCAGTCACTGTCAACACCGCCAGTAATTATTCTCTCTTCCAATTAATGGTGAGACTTTTAATGAGGTaGATGGCCTCTGATAGCAAT | + |
|
Preference number: 4 (lower is better) Translates to: PAVTVNTASNYSLFQLMVRLLMR*MASDSN Trigger: ATTGCTATCAGAGGCCATCCACCTCATTAAAAGTCT...CACCATTAATTGGAAGAGAGAATAATTACTGGCGGTGTTGACAGTGACTGCTGG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000025160.9 ENSMUST00000234736.2 |
||
| CDS-3UTR TCA 90 bp | GGCAAACAGGTGAATGTCCAATTACACTGTTATCTGAACTGTGCGACTTTTCCTCCCTTTCTTTGTCTTTaGGCTCCTTTATTTGAAGAC | + |
|
Preference number: 4 (lower is better) Translates to: GKQVNVQLHCYLNCATFPPFLCL*APLFED Trigger: GTCTTCAAATAAAGGAGCTCAAAGACAAAGAAAGGG...AGGAAAAGTCGCACAGTTCAGATAACAGTGTAATTGGACATTCACCTGTTTGCC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000025160.9 ENSMUST00000115837.3 ENSMUST00000234736.2 |
||
| CDS-3UTR TCA 90 bp | AAGCCAGCAGTCACTGTCAACACCGCCAGTAATTATTCTCTCTTCCAATTAATGCCCTTTCTTTGTCTTTaGGCTCCTTTATTTGAAGAC | + |
|
Preference number: 4 (lower is better) Translates to: KPAVTVNTASNYSLFQLMPFLCL*APLFED Trigger: GTCTTCAAATAAAGGAGCTCAAAGACAAAGAAAGGG...CATTAATTGGAAGAGAGAATAATTACTGGCGGTGTTGACAGTGACTGCTGGCTT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000025160.9 ENSMUST00000234736.2 |
||
| CDS-3UTR TCA 90 bp | CCAGCAGTCACTGTCAACACCGCCAGTAATTATTCTCTCTTCCAATTAATGGTGCCTCTTTATCTTTTGTaGCAGAAGTCCATTCTTCAA | + |
|
Preference number: 4 (lower is better) Translates to: PAVTVNTASNYSLFQLMVPLYLL*QKSILQ Trigger: TTGAAGAATGGACTTCTGTCACAAAAGATAAAGAGG...CACCATTAATTGGAAGAGAGAATAATTACTGGCGGTGTTGACAGTGACTGCTGG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000025160.9 ENSMUST00000234736.2 |
||
| CDS-3UTR TCA 90 bp | CAAACAGGTGAATGTCCAATTACACTGTTATCTGAACTGTGCGACTTTTCCTGTGTTAACAGTCTCAATTaGAGTTGTGTAGTGGGCATC | + |
|
Preference number: 4 (lower is better) Translates to: QTGECPITLLSELCDFSCVNSLN*SCVVGI Trigger: GATGCCCACTACACAACTTCAATTGAGACTGTTAAC...ACAGGAAAAGTCGCACAGTTCAGATAACAGTGTAATTGGACATTCACCTGTTTG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000025160.9 ENSMUST00000115837.3 ENSMUST00000234736.2 |
||
| CDS-3UTR TCA 90 bp | GGAAGTGTGAAATGGCAAACAGGTGAATGTCCAATTACACTGTTATCTGAACTGGTTAACAGTCTCAATTaGAGTTGTGTAGTGGGCATC | + |
|
Preference number: 4 (lower is better) Translates to: GSVKWQTGECPITLLSELVNSLN*SCVVGI Trigger: GATGCCCACTACACAACTTCAATTGAGACTGTTAAC...CAGTTCAGATAACAGTGTAATTGGACATTCACCTGTTTGCCATTTCACACTTCC 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000025160.9 ENSMUST00000115837.3 ENSMUST00000234736.2 |
||
| CDS-3UTR TCA 90 bp | GGCAAACAGGTGAATGTCCAATTACACTGTTATCTGAACTGTGCGACTTTTCCTCCTTTTGTTTTCTTCTaGCTGTGCCTCATATACGAT | + |
|
Preference number: 4 (lower is better) Translates to: GKQVNVQLHCYLNCATFPPFVFF*LCLIYD Trigger: ATCGTATATGAGGCACAGTCAGAAGAAAACAAAAGG...AGGAAAAGTCGCACAGTTCAGATAACAGTGTAATTGGACATTCACCTGTTTGCC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000025160.9 ENSMUST00000115837.3 ENSMUST00000234736.2 |
||
| CDS-3UTR TCA 90 bp | GGAAGTGTGAAATGGCAAACAGGTGAATGTCCAATTACACTGTTATCTGAACTGTGTCAAATTGCAGCTTaGAGAACTCTTCCTGCAACT | + |
|
Preference number: 4 (lower is better) Translates to: GSVKWQTGECPITLLSELCQIAA*RTLPAT Trigger: AGTTGCAGGAAGAGTTCTTCAAGCTGCAATTTGACA...CAGTTCAGATAACAGTGTAATTGGACATTCACCTGTTTGCCATTTCACACTTCC 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000025160.9 ENSMUST00000115837.3 ENSMUST00000234736.2 |
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| CDS-3UTR TCA 90 bp | GGCAAACAGGTGAATGTCCAATTACACTGTTATCTGAACTGTGCGACTTTTCCTCATCTTGACATTTCCTaGTATTCTTCAGGGTGTTCT | + |
|
Preference number: 4 (lower is better) Translates to: GKQVNVQLHCYLNCATFPHLDIS*YSSGCS Trigger: AGAACACCCTGAAGAATATCAGGAAATGTCAAGATG...AGGAAAAGTCGCACAGTTCAGATAACAGTGTAATTGGACATTCACCTGTTTGCC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000025160.9 ENSMUST00000115837.3 ENSMUST00000234736.2 |
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| CDS-3UTR TCA 90 bp | TGGCAAACAGGTGAATGTCCAATTACACTGTTATCTGAACTGTGCGACTTTTCCACAGCTAATATTTTCTaGATGCTGTTCTGGGAGTCT | + |
|
Preference number: 4 (lower is better) Translates to: WQTGECPITLLSELCDFSTANIF*MLFWES Trigger: AGACTCCCAGAACAGCATTCAGAAAATATTAGCTGT...GGAAAAGTCGCACAGTTCAGATAACAGTGTAATTGGACATTCACCTGTTTGCCA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000025160.9 ENSMUST00000115837.3 ENSMUST00000234736.2 |
||
| CDS-3UTR GCA 90 bp | GGCAAACAGGTGAATGTCCAATTACACTGTTATCTGAACTGTGCGACTTTTCCTTTTACCTGTATCAAGTaGATCCTCATTGGTAGTAGG | + |
|
Preference number: 4 (lower is better) Translates to: GKQVNVQLHCYLNCATFPFTCIK*ILIGSR Trigger: CCTACTACCAATGAGGATGCACTTGATACAGGTAAA...AGGAAAAGTCGCACAGTTCAGATAACAGTGTAATTGGACATTCACCTGTTTGCC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000025160.9 ENSMUST00000115837.3 ENSMUST00000234736.2 |
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| CDS-3UTR GCA 90 bp | ACAGGTGAATGTCCAATTACACTGTTATCTGAACTGTGCGACTTTTCCTGTCTTAGAGACGTCCAAACCTaGCTCTTTATCTTTTGTGAC | + |
|
Preference number: 4 (lower is better) Translates to: TGECPITLLSELCDFSCLRDVQT*LFIFCD Trigger: GTCACAAAAGATAAAGAGGCAGGTTTGGACGTCTCT...AAGACAGGAAAAGTCGCACAGTTCAGATAACAGTGTAATTGGACATTCACCTGT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000025160.9 ENSMUST00000115837.3 ENSMUST00000234736.2 |
||
| CDS-3UTR GCA 90 bp | AAATGGCAAACAGGTGAATGTCCAATTACACTGTTATCTGAACTGTGCGACTTTAGCTTGTTCTGCTTCTaGTCTGTCAGTTTCCAGACT | + |
|
Preference number: 4 (lower is better) Translates to: KWQTGECPITLLSELCDFSLFCF*SVSFQT Trigger: AGTCTGGAAACTGACAGAGCAGAAGCAGAACAAGCT...AAAGTCGCACAGTTCAGATAACAGTGTAATTGGACATTCACCTGTTTGCCATTT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000025160.9 ENSMUST00000115837.3 ENSMUST00000234736.2 |
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| CDS-3UTR GCA 90 bp | TGGCAAACAGGTGAATGTCCAATTACACTGTTATCTGAACTGTGCGACTTTTCCCTTAAGCCTTGCTTTTaGACCTTCACATTTATCCAC | + |
|
Preference number: 4 (lower is better) Translates to: WQTGECPITLLSELCDFSLKPCF*TFTFIH Trigger: GTGGATAAATGTGAAGGTGCAAAAGCAAGGCTTAAG...GGAAAAGTCGCACAGTTCAGATAACAGTGTAATTGGACATTCACCTGTTTGCCA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000025160.9 ENSMUST00000115837.3 ENSMUST00000234736.2 |
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| CDS-3UTR GCA 90 bp | GGCAAACAGGTGAATGTCCAATTACACTGTTATCTGAACTGTGCGACTTTTCCTCTTAAGCCTTGCTTTTaGACCTTCACATTTATCCAC | + |
|
Preference number: 4 (lower is better) Translates to: GKQVNVQLHCYLNCATFPLKPCF*TFTFIH Trigger: GTGGATAAATGTGAAGGTGCAAAAGCAAGGCTTAAG...AGGAAAAGTCGCACAGTTCAGATAACAGTGTAATTGGACATTCACCTGTTTGCC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000025160.9 ENSMUST00000115837.3 ENSMUST00000234736.2 |
||
| CDS-3UTR GCA 90 bp | AGTGTGAAATGGCAAACAGGTGAATGTCCAATTACACTGTTATCTGAACTGTGCCCAGTTCATTTGTTGTaGTCTGTGTTTCTCTCAGCA | + |
|
Preference number: 4 (lower is better) Translates to: SVKWQTGECPITLLSELCPVHLL*SVFLSA Trigger: TGCTGAGAGAAACACAGAGCACAACAAATGAACTGG...GCACAGTTCAGATAACAGTGTAATTGGACATTCACCTGTTTGCCATTTCACACT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000025160.9 ENSMUST00000115837.3 ENSMUST00000234736.2 |
||
| CDS-3UTR GCA 90 bp | GAGCATCTAAGGGTGTCACATGGGTATAGGCACTGTTACAGTTTACACAAACTTCTCTTCCGTATATTATaGAGCATCTTAGAGTGCTGT | + |
|
Preference number: 4 (lower is better) Translates to: EHLRVSHGYRHCYSLHKLLFRIL*SILECC Trigger: ACAGCACTCTAAGATGCTGCATAATATACGGAAGAG...AAGTTTGTGTAAACTGTAACAGTGCCTATACCCATGTGACACCCTTAGATGCTC 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000025160.9 ENSMUST00000234736.2 |
||
| CDS-3UTR GCA 90 bp | AAATGGCAAACAGGTGAATGTCCAATTACACTGTTATCTGAACTGTGCGACTTTCTCTCTTCACAGTACTaGTTCTCTCTCATGAGATGG | + |
|
Preference number: 4 (lower is better) Translates to: KWQTGECPITLLSELCDFLSSQY*FSLMRW Trigger: CCATCTCATGAGAGAGAAGCAGTACTGTGAAGAGAG...AAAGTCGCACAGTTCAGATAACAGTGTAATTGGACATTCACCTGTTTGCCATTT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000025160.9 ENSMUST00000115837.3 ENSMUST00000234736.2 |
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| CDS-3UTR CCA 90 bp | GGCAAACAGGTGAATGTCCAATTACACTGTTATCTGAACTGTGCGACTTTTCCTACAAGCCTTGCATTCTaGCATTTTCTGCAAGCATTA | + |
|
Preference number: 4 (lower is better) Translates to: GKQVNVQLHCYLNCATFPTSLAF*HFLQAL Trigger: TAATGCTTGCAGAAAATGCCAGAATGCAAGGCTTGT...AGGAAAAGTCGCACAGTTCAGATAACAGTGTAATTGGACATTCACCTGTTTGCC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000025160.9 ENSMUST00000115837.3 ENSMUST00000234736.2 |
||
| CDS-3UTR CCA 90 bp | AAATGGCAAACAGGTGAATGTCCAATTACACTGTTATCTGAACTGTGCGACTTTGCTAATGGGAGTTCTTaGAGCTTCCAAATGGACCAA | + |
|
Preference number: 4 (lower is better) Translates to: KWQTGECPITLLSELCDFANGSS*SFQMDQ Trigger: TTGGTCCATTTGGAAGCTCCAAGAACTCCCATTAGC...AAAGTCGCACAGTTCAGATAACAGTGTAATTGGACATTCACCTGTTTGCCATTT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000025160.9 ENSMUST00000115837.3 ENSMUST00000234736.2 |
||
| CDS-3UTR CCA 90 bp | ATCGTTCCTGACAGCGGCATGAAAGTCACCTGTTTCATTGTTATGGATTTGCTGCGCTTTGATATTCTTTaGCTAAACGCAGGTTTTCTT | + |
|
Preference number: 4 (lower is better) Translates to: IVPDSGMKVTCFIVMDLLRFDIL*LNAGFL Trigger: AAGAAAACCTGCGTTTAGCCAAAGAATATCAAAGCG...CAGCAAATCCATAACAATGAAACAGGTGACTTTCATGCCGCTGTCAGGAACGAT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000025160.9 ENSMUST00000234736.2 |
||
| CDS-3UTR TCA 90 bp | TTTTTCGTCCATGGAAGTGTGAAATGGCAAACAGGTGAATGTCCAATTACACTGCCCTTTCTTTGTCTTTaGGCTCCTTTATTTGAAGAC | + |
|
Preference number: 4 (lower is better) Translates to: FFVHGSVKWQTGECPITLPFLCL*APLFED Trigger: GTCTTCAAATAAAGGAGCTCAAAGACAAAGAAAGGG...CAGTGTAATTGGACATTCACCTGTTTGCCATTTCACACTTCCATGGACGAAAAA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000025160.9 ENSMUST00000115837.3 ENSMUST00000234736.2 |
||
| CDS-3UTR TCA 90 bp | AAGCCAGCAGTCACTGTCAACACCGCCAGTAATTATTCTCTCTTCCAATTAATGTGTCTCCAGCAATATTaGTCAAACAGTCTTTTCAAG | + |
|
Preference number: 4 (lower is better) Translates to: KPAVTVNTASNYSLFQLMCLQQY*SNSLFK Trigger: CTTGAAAAGACTGTTTGATCAATATTGCTGGAGACA...CATTAATTGGAAGAGAGAATAATTACTGGCGGTGTTGACAGTGACTGCTGGCTT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000025160.9 ENSMUST00000234736.2 |
||
| CDS-3UTR TCA 90 bp | TTTTTCGTCCATGGAAGTGTGAAATGGCAAACAGGTGAATGTCCAATTACACTGCCTTTTGTTTTCTTCTaGCTGTGCCTCATATACGAT | + |
|
Preference number: 4 (lower is better) Translates to: FFVHGSVKWQTGECPITLPFVFF*LCLIYD Trigger: ATCGTATATGAGGCACAGTCAGAAGAAAACAAAAGG...CAGTGTAATTGGACATTCACCTGTTTGCCATTTCACACTTCCATGGACGAAAAA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000025160.9 ENSMUST00000115837.3 ENSMUST00000234736.2 |
||
| CDS-3UTR TCA 90 bp | GGAAGTGTGAAATGGCAAACAGGTGAATGTCCAATTACACTGTTATCTGAACTGCCTTTTGTTTTCTTCTaGCTGTGCCTCATATACGAT | + |
|
Preference number: 4 (lower is better) Translates to: GSVKWQTGECPITLLSELPFVFF*LCLIYD Trigger: ATCGTATATGAGGCACAGTCAGAAGAAAACAAAAGG...CAGTTCAGATAACAGTGTAATTGGACATTCACCTGTTTGCCATTTCACACTTCC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000025160.9 ENSMUST00000115837.3 ENSMUST00000234736.2 |
||
| CDS-3UTR TCA 90 bp | AAGCCAGCAGTCACTGTCAACACCGCCAGTAATTATTCTCTCTTCCAATTAATGTGCATCTCAATAAACTaGGTTTCTTCAATGGCATAC | + |
|
Preference number: 4 (lower is better) Translates to: KPAVTVNTASNYSLFQLMCISIN*VSSMAY Trigger: GTATGCCATTGAAGAAACTCAGTTTATTGAGATGCA...CATTAATTGGAAGAGAGAATAATTACTGGCGGTGTTGACAGTGACTGCTGGCTT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000025160.9 ENSMUST00000234736.2 |
||
| CDS-3UTR TCA 90 bp | CAAACAGGTGAATGTCCAATTACACTGTTATCTGAACTGTGCGACTTTTCCTGTCATCTTGACATTTCCTaGTATTCTTCAGGGTGTTCT | + |
|
Preference number: 4 (lower is better) Translates to: QTGECPITLLSELCDFSCHLDIS*YSSGCS Trigger: AGAACACCCTGAAGAATATCAGGAAATGTCAAGATG...ACAGGAAAAGTCGCACAGTTCAGATAACAGTGTAATTGGACATTCACCTGTTTG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000025160.9 ENSMUST00000115837.3 ENSMUST00000234736.2 |
||
| CDS-3UTR TCA 90 bp | AAGCCAGCAGTCACTGTCAACACCGCCAGTAATTATTCTCTCTTCCAATTAATGCAGAAAGAGAAAAATTaGGTGATAGCAGTCTGTCAT | + |
|
Preference number: 4 (lower is better) Translates to: KPAVTVNTASNYSLFQLMQKEKN*VIAVCH Trigger: ATGACAGACTGCTATCACTCAATTTTTCTCTTTCTG...CATTAATTGGAAGAGAGAATAATTACTGGCGGTGTTGACAGTGACTGCTGGCTT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000025160.9 ENSMUST00000234736.2 |
||
| CDS-3UTR TCA 90 bp | GTCCATGGAAGTGTGAAATGGCAAACAGGTGAATGTCCAATTACACTGTTATCTACAGCTAATATTTTCTaGATGCTGTTCTGGGAGTCT | + |
|
Preference number: 4 (lower is better) Translates to: VHGSVKWQTGECPITLLSTANIF*MLFWES Trigger: AGACTCCCAGAACAGCATTCAGAAAATATTAGCTGT...AGATAACAGTGTAATTGGACATTCACCTGTTTGCCATTTCACACTTCCATGGAC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000025160.9 ENSMUST00000115837.3 ENSMUST00000234736.2 |
||
| CDS-3UTR TCA 90 bp | AGTGTGAAATGGCAAACAGGTGAATGTCCAATTACACTGTTATCTGAACTGTGCGTCATCTTCTCCACATaGACTATTTGGGAAACTCTT | + |
|
Preference number: 4 (lower is better) Translates to: SVKWQTGECPITLLSELCVIFST*TIWETL Trigger: AAGAGTTTCCCAAATAGTTCATGTGGAGAAGATGAC...GCACAGTTCAGATAACAGTGTAATTGGACATTCACCTGTTTGCCATTTCACACT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000025160.9 ENSMUST00000115837.3 ENSMUST00000234736.2 |
||
| CDS-3UTR TCA 90 bp | ACAGGTGAATGTCCAATTACACTGTTATCTGAACTGTGCGACTTTTCCTGTCTTGTCATCTTCTCCACATaGACTATTTGGGAAACTCTT | + |
|
Preference number: 4 (lower is better) Translates to: TGECPITLLSELCDFSCLVIFST*TIWETL Trigger: AAGAGTTTCCCAAATAGTTCATGTGGAGAAGATGAC...AAGACAGGAAAAGTCGCACAGTTCAGATAACAGTGTAATTGGACATTCACCTGT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000025160.9 ENSMUST00000115837.3 ENSMUST00000234736.2 |
||
| CDS-3UTR TCA 90 bp | TTTTTCGTCCATGGAAGTGTGAAATGGCAAACAGGTGAATGTCCAATTACACTGGTCATCTTCTCCACATaGACTATTTGGGAAACTCTT | + |
|
Preference number: 4 (lower is better) Translates to: FFVHGSVKWQTGECPITLVIFST*TIWETL Trigger: AAGAGTTTCCCAAATAGTTCATGTGGAGAAGATGAC...CAGTGTAATTGGACATTCACCTGTTTGCCATTTCACACTTCCATGGACGAAAAA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000025160.9 ENSMUST00000115837.3 ENSMUST00000234736.2 |
||
| CDS-3UTR GCA 90 bp | AAATGGCAAACAGGTGAATGTCCAATTACACTGTTATCTGAACTGTGCGACTTTAGAGACGTCCAAACCTaGCTCTTTATCTTTTGTGAC | + |
|
Preference number: 4 (lower is better) Translates to: KWQTGECPITLLSELCDFRDVQT*LFIFCD Trigger: GTCACAAAAGATAAAGAGGCAGGTTTGGACGTCTCT...AAAGTCGCACAGTTCAGATAACAGTGTAATTGGACATTCACCTGTTTGCCATTT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000025160.9 ENSMUST00000115837.3 ENSMUST00000234736.2 |
||
| CDS-3UTR GCA 90 bp | AGTGTGAAATGGCAAACAGGTGAATGTCCAATTACACTGTTATCTGAACTGTGCCTTAAGCCTTGCTTTTaGACCTTCACATTTATCCAC | + |
|
Preference number: 4 (lower is better) Translates to: SVKWQTGECPITLLSELCLKPCF*TFTFIH Trigger: GTGGATAAATGTGAAGGTGCAAAAGCAAGGCTTAAG...GCACAGTTCAGATAACAGTGTAATTGGACATTCACCTGTTTGCCATTTCACACT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000025160.9 ENSMUST00000115837.3 ENSMUST00000234736.2 |
||
| CDS-3UTR GCA 90 bp | TTTTTCGTCCATGGAAGTGTGAAATGGCAAACAGGTGAATGTCCAATTACACTGCTCTTCCGTATATTATaGAGCATCTTAGAGTGCTGT | + |
|
Preference number: 4 (lower is better) Translates to: FFVHGSVKWQTGECPITLLFRIL*SILECC Trigger: ACAGCACTCTAAGATGCTGCATAATATACGGAAGAG...CAGTGTAATTGGACATTCACCTGTTTGCCATTTCACACTTCCATGGACGAAAAA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000025160.9 ENSMUST00000115837.3 ENSMUST00000234736.2 |
||
| CDS-3UTR GCA 90 bp | TTTTTCGTCCATGGAAGTGTGAAATGGCAAACAGGTGAATGTCCAATTACACTGCTAATATTTTCTGAATaGTGTTCTGGGAGTCTCCCT | + |
|
Preference number: 4 (lower is better) Translates to: FFVHGSVKWQTGECPITLLIFSE*CSGSLP Trigger: AGGGAGACTCCCAGAACAGCATTCAGAAAATATTAG...CAGTGTAATTGGACATTCACCTGTTTGCCATTTCACACTTCCATGGACGAAAAA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000025160.9 ENSMUST00000115837.3 ENSMUST00000234736.2 |
||
| CDS-3UTR GCA 90 bp | GCAGTCACTGTCAACACCGCCAGTAATTATTCTCTCTTCCAATTAATGGTGACAAAATCTAAGATGTGTTaGATTAGGCTTGAGGATTCC | + |
|
Preference number: 4 (lower is better) Translates to: AVTVNTASNYSLFQLMVTKSKMC*IRLEDS Trigger: GGAATCCTCAAGCCTAATGCAACACATCTTAGATTT...TGTCACCATTAATTGGAAGAGAGAATAATTACTGGCGGTGTTGACAGTGACTGC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000025160.9 ENSMUST00000234736.2 |
||
| CDS-3UTR GCA 90 bp | GAGCATCTAAGGGTGTCACATGGGTATAGGCACTGTTACAGTTTACACAAACTTAAATCTAAGATGTGTTaGATTAGGCTTGAGGATTCC | + |
|
Preference number: 4 (lower is better) Translates to: EHLRVSHGYRHCYSLHKLKSKMC*IRLEDS Trigger: GGAATCCTCAAGCCTAATGCAACACATCTTAGATTT...AAGTTTGTGTAAACTGTAACAGTGCCTATACCCATGTGACACCCTTAGATGCTC 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000025160.9 ENSMUST00000234736.2 |
||
| CDS-3UTR CCA 90 bp | GTCCATGGAAGTGTGAAATGGCAAACAGGTGAATGTCCAATTACACTGTTATCTACAAGCCTTGCATTCTaGCATTTTCTGCAAGCATTA | + |
|
Preference number: 4 (lower is better) Translates to: VHGSVKWQTGECPITLLSTSLAF*HFLQAL Trigger: TAATGCTTGCAGAAAATGCCAGAATGCAAGGCTTGT...AGATAACAGTGTAATTGGACATTCACCTGTTTGCCATTTCACACTTCCATGGAC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000025160.9 ENSMUST00000115837.3 ENSMUST00000234736.2 |
||
| CDS-3UTR CCA 90 bp | TCAGATGAGGCAAAGCCAATTGCAATCAGTCACCCAGAGCTGAAATTAGATCGTTTTTATCCTCATGTCTaGAGAAGAAGAATTCTGACA | + |
|
Preference number: 4 (lower is better) Translates to: SDEAKPIAISHPELKLDRFYPHV*RRRILT Trigger: TGTCAGAATTCTTCTTCTCCAGACATGAGGATAAAA...ACGATCTAATTTCAGCTCTGGGTGACTGATTGCAATTGGCTTTGCCTCATCTGA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000025160.9 ENSMUST00000234736.2 |
||
| CDS-3UTR CCA 90 bp | AAATGGCAAACAGGTGAATGTCCAATTACACTGTTATCTGAACTGTGCGACTTTATCCTTTCCTTTTTCTaGGTGGACTTGTTTCTCTGG | + |
|
Preference number: 4 (lower is better) Translates to: KWQTGECPITLLSELCDFILSFF*VDLFLW Trigger: CCAGAGAAACAAGTCCACCCAGAAAAAGGAAAGGAT...AAAGTCGCACAGTTCAGATAACAGTGTAATTGGACATTCACCTGTTTGCCATTT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000025160.9 ENSMUST00000115837.3 ENSMUST00000234736.2 |
||
| CDS-3UTR CCA 90 bp | GTCCATGGAAGTGTGAAATGGCAAACAGGTGAATGTCCAATTACACTGTTATCTAGACTTTTAATGAGGTaGATGGCCTCTGATAGCAAT | + |
|
Preference number: 4 (lower is better) Translates to: VHGSVKWQTGECPITLLSRLLMR*MASDSN Trigger: ATTGCTATCAGAGGCCATCCACCTCATTAAAAGTCT...AGATAACAGTGTAATTGGACATTCACCTGTTTGCCATTTCACACTTCCATGGAC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000025160.9 ENSMUST00000115837.3 ENSMUST00000234736.2 |
||
| CDS-3UTR CCA 90 bp | GGAAGTGTGAAATGGCAAACAGGTGAATGTCCAATTACACTGTTATCTGAACTGAGACTTTTAATGAGGTaGATGGCCTCTGATAGCAAT | + |
|
Preference number: 4 (lower is better) Translates to: GSVKWQTGECPITLLSELRLLMR*MASDSN Trigger: ATTGCTATCAGAGGCCATCCACCTCATTAAAAGTCT...CAGTTCAGATAACAGTGTAATTGGACATTCACCTGTTTGCCATTTCACACTTCC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000025160.9 ENSMUST00000115837.3 ENSMUST00000234736.2 |
||
| CDS-3UTR CCA 90 bp | GTCCATGGAAGTGTGAAATGGCAAACAGGTGAATGTCCAATTACACTGTTATCTCTTGGAGCTTCCAAATaGACCAAGAGTCAATTTTCA | + |
|
Preference number: 4 (lower is better) Translates to: VHGSVKWQTGECPITLLSLGASK*TKSQFS Trigger: TGAAAATTGACTCTTGGTCCATTTGGAAGCTCCAAG...AGATAACAGTGTAATTGGACATTCACCTGTTTGCCATTTCACACTTCCATGGAC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000025160.9 ENSMUST00000115837.3 ENSMUST00000234736.2 |
||
| CDS-3UTR CCA 90 bp | AGTGTGAAATGGCAAACAGGTGAATGTCCAATTACACTGTTATCTGAACTGTGCCTTGGAGCTTCCAAATaGACCAAGAGTCAATTTTCA | + |
|
Preference number: 4 (lower is better) Translates to: SVKWQTGECPITLLSELCLGASK*TKSQFS Trigger: TGAAAATTGACTCTTGGTCCATTTGGAAGCTCCAAG...GCACAGTTCAGATAACAGTGTAATTGGACATTCACCTGTTTGCCATTTCACACT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000025160.9 ENSMUST00000115837.3 ENSMUST00000234736.2 |
||
| CDS-3UTR TCA 90 bp | GTCCATGGAAGTGTGAAATGGCAAACAGGTGAATGTCCAATTACACTGTTATCTCCTCTTTATCTTTTGTaGCAGAAGTCCATTCTTCAA | + |
|
Preference number: 4 (lower is better) Translates to: VHGSVKWQTGECPITLLSPLYLL*QKSILQ Trigger: TTGAAGAATGGACTTCTGTCACAAAAGATAAAGAGG...AGATAACAGTGTAATTGGACATTCACCTGTTTGCCATTTCACACTTCCATGGAC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000025160.9 ENSMUST00000115837.3 ENSMUST00000234736.2 |
||
| CDS-3UTR TCA 90 bp | ACAGGTGAATGTCCAATTACACTGTTATCTGAACTGTGCGACTTTTCCTGTCTTCCTCTTTATCTTTTGTaGCAGAAGTCCATTCTTCAA | + |
|
Preference number: 4 (lower is better) Translates to: TGECPITLLSELCDFSCLPLYLL*QKSILQ Trigger: TTGAAGAATGGACTTCTGTCACAAAAGATAAAGAGG...AAGACAGGAAAAGTCGCACAGTTCAGATAACAGTGTAATTGGACATTCACCTGT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000025160.9 ENSMUST00000115837.3 ENSMUST00000234736.2 |
||
| CDS-3UTR TCA 90 bp | GTCCATGGAAGTGTGAAATGGCAAACAGGTGAATGTCCAATTACACTGTTATCTTGTCTCCAGCAATATTaGTCAAACAGTCTTTTCAAG | + |
|
Preference number: 4 (lower is better) Translates to: VHGSVKWQTGECPITLLSCLQQY*SNSLFK Trigger: CTTGAAAAGACTGTTTGATCAATATTGCTGGAGACA...AGATAACAGTGTAATTGGACATTCACCTGTTTGCCATTTCACACTTCCATGGAC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000025160.9 ENSMUST00000115837.3 ENSMUST00000234736.2 |
||
| CDS-3UTR TCA 90 bp | AGTGTGAAATGGCAAACAGGTGAATGTCCAATTACACTGTTATCTGAACTGTGCTGTCTCCAGCAATATTaGTCAAACAGTCTTTTCAAG | + |
|
Preference number: 4 (lower is better) Translates to: SVKWQTGECPITLLSELCCLQQY*SNSLFK Trigger: CTTGAAAAGACTGTTTGATCAATATTGCTGGAGACA...GCACAGTTCAGATAACAGTGTAATTGGACATTCACCTGTTTGCCATTTCACACT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000025160.9 ENSMUST00000115837.3 ENSMUST00000234736.2 |
||
| CDS-3UTR TCA 90 bp | TTTTTCGTCCATGGAAGTGTGAAATGGCAAACAGGTGAATGTCCAATTACACTGCAGAAAGAGAAAAATTaGGTGATAGCAGTCTGTCAT | + |
|
Preference number: 4 (lower is better) Translates to: FFVHGSVKWQTGECPITLQKEKN*VIAVCH Trigger: ATGACAGACTGCTATCACTCAATTTTTCTCTTTCTG...CAGTGTAATTGGACATTCACCTGTTTGCCATTTCACACTTCCATGGACGAAAAA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 3 transcripts: ENSMUST00000025160.9 ENSMUST00000115837.3 ENSMUST00000234736.2 |
||
| CDS-3UTR TCA 90 bp | ACAGGTGAATGTCCAATTACACTGTTATCTGAACTGTGCGACTTTTCCTGTCTTCAGAAAGAGAAAAATTaGGTGATAGCAGTCTGTCAT | + |
|
Preference number: 4 (lower is better) Translates to: TGECPITLLSELCDFSCLQKEKN*VIAVCH Trigger: ATGACAGACTGCTATCACTCAATTTTTCTCTTTCTG...AAGACAGGAAAAGTCGCACAGTTCAGATAACAGTGTAATTGGACATTCACCTGT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000025160.9 ENSMUST00000115837.3 ENSMUST00000234736.2 |
||
| CDS-3UTR GCA 90 bp | AAATGGCAAACAGGTGAATGTCCAATTACACTGTTATCTGAACTGTGCGACTTTCTCTTCCGTATATTATaGAGCATCTTAGAGTGCTGT | + |
|
Preference number: 4 (lower is better) Translates to: KWQTGECPITLLSELCDFLFRIL*SILECC Trigger: ACAGCACTCTAAGATGCTGCATAATATACGGAAGAG...AAAGTCGCACAGTTCAGATAACAGTGTAATTGGACATTCACCTGTTTGCCATTT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000025160.9 ENSMUST00000115837.3 ENSMUST00000234736.2 |
||
| CDS-3UTR GCA 90 bp | AAGCCAGCAGTCACTGTCAACACCGCCAGTAATTATTCTCTCTTCCAATTAATGTTGAAGAACTCTTCCTaGAACTTTTTCAGTCTTTCT | + |
|
Preference number: 4 (lower is better) Translates to: KPAVTVNTASNYSLFQLMLKNSS*NFFSLS Trigger: AGAAAGACTGAAAAAGTTGCAGGAAGAGTTCTTCAA...CATTAATTGGAAGAGAGAATAATTACTGGCGGTGTTGACAGTGACTGCTGGCTT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000025160.9 ENSMUST00000234736.2 |
||
| CDS-3UTR GCA 90 bp | GGCAAACAGGTGAATGTCCAATTACACTGTTATCTGAACTGTGCGACTTTTCCTTTGAAGAACTCTTCCTaGAACTTTTTCAGTCTTTCT | + |
|
Preference number: 4 (lower is better) Translates to: GKQVNVQLHCYLNCATFPLKNSS*NFFSLS Trigger: AGAAAGACTGAAAAAGTTGCAGGAAGAGTTCTTCAA...AGGAAAAGTCGCACAGTTCAGATAACAGTGTAATTGGACATTCACCTGTTTGCC 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000025160.9 ENSMUST00000115837.3 ENSMUST00000234736.2 |
||
| CDS-3UTR GCA 90 bp | AAATGGCAAACAGGTGAATGTCCAATTACACTGTTATCTGAACTGTGCGACTTTCTAATATTTTCTGAATaGTGTTCTGGGAGTCTCCCT | + |
|
Preference number: 4 (lower is better) Translates to: KWQTGECPITLLSELCDFLIFSE*CSGSLP Trigger: AGGGAGACTCCCAGAACAGCATTCAGAAAATATTAG...AAAGTCGCACAGTTCAGATAACAGTGTAATTGGACATTCACCTGTTTGCCATTT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000025160.9 ENSMUST00000115837.3 ENSMUST00000234736.2 |
||
| CDS-3UTR GCA 90 bp | AGTGTGAAATGGCAAACAGGTGAATGTCCAATTACACTGTTATCTGAACTGTGCAAATCTAAGATGTGTTaGATTAGGCTTGAGGATTCC | + |
|
Preference number: 4 (lower is better) Translates to: SVKWQTGECPITLLSELCKSKMC*IRLEDS Trigger: GGAATCCTCAAGCCTAATGCAACACATCTTAGATTT...GCACAGTTCAGATAACAGTGTAATTGGACATTCACCTGTTTGCCATTTCACACT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000025160.9 ENSMUST00000115837.3 ENSMUST00000234736.2 |
||
| CDS-3UTR CCA 90 bp | AAGCCAGCAGTCACTGTCAACACCGCCAGTAATTATTCTCTCTTCCAATTAATGTTTTATCCTCATGTCTaGAGAAGAAGAATTCTGACA | + |
|
Preference number: 4 (lower is better) Translates to: KPAVTVNTASNYSLFQLMFYPHV*RRRILT Trigger: TGTCAGAATTCTTCTTCTCCAGACATGAGGATAAAA...CATTAATTGGAAGAGAGAATAATTACTGGCGGTGTTGACAGTGACTGCTGGCTT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000025160.9 ENSMUST00000234736.2 |
||
| CDS-3UTR CCA 90 bp | ACAGGTGAATGTCCAATTACACTGTTATCTGAACTGTGCGACTTTTCCTGTCTTCGCTTTGATATTCTTTaGCTAAACGCAGGTTTTCTT | + |
|
Preference number: 4 (lower is better) Translates to: TGECPITLLSELCDFSCLRFDIL*LNAGFL Trigger: AAGAAAACCTGCGTTTAGCCAAAGAATATCAAAGCG...AAGACAGGAAAAGTCGCACAGTTCAGATAACAGTGTAATTGGACATTCACCTGT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000025160.9 ENSMUST00000115837.3 ENSMUST00000234736.2 |
||
| CDS-3UTR TCA 90 bp | AAATGGCAAACAGGTGAATGTCCAATTACACTGTTATCTGAACTGTGCGACTTTTGCATCTCAATAAACTaGGTTTCTTCAATGGCATAC | + |
|
Preference number: 4 (lower is better) Translates to: KWQTGECPITLLSELCDFCISIN*VSSMAY Trigger: GTATGCCATTGAAGAAACTCAGTTTATTGAGATGCA...AAAGTCGCACAGTTCAGATAACAGTGTAATTGGACATTCACCTGTTTGCCATTT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000025160.9 ENSMUST00000115837.3 ENSMUST00000234736.2 |
||
| CDS-3UTR GCA 90 bp | ACAGGTGAATGTCCAATTACACTGTTATCTGAACTGTGCGACTTTTCCTGTCTTTCTAACTCTTTCAGTTaGTCCTCTACTTCTAACAAA | + |
|
Preference number: 4 (lower is better) Translates to: TGECPITLLSELCDFSCLSNSFS*SSTSNK Trigger: TTTGTTAGAAGTAGAGGAGCAACTGAAAGAGTTAGA...AAGACAGGAAAAGTCGCACAGTTCAGATAACAGTGTAATTGGACATTCACCTGT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000025160.9 ENSMUST00000115837.3 ENSMUST00000234736.2 |
||
| CDS-3UTR GCA 90 bp | GGAAGTGTGAAATGGCAAACAGGTGAATGTCCAATTACACTGTTATCTGAACTGTCTAACTCTTTCAGTTaGTCCTCTACTTCTAACAAA | + |
|
Preference number: 4 (lower is better) Translates to: GSVKWQTGECPITLLSELSNSFS*SSTSNK Trigger: TTTGTTAGAAGTAGAGGAGCAACTGAAAGAGTTAGA...CAGTTCAGATAACAGTGTAATTGGACATTCACCTGTTTGCCATTTCACACTTCC 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000025160.9 ENSMUST00000115837.3 ENSMUST00000234736.2 |
||
| CDS-3UTR CCA 90 bp | GTCCATGGAAGTGTGAAATGGCAAACAGGTGAATGTCCAATTACACTGTTATCTTTTTATCCTCATGTCTaGAGAAGAAGAATTCTGACA | + |
|
Preference number: 4 (lower is better) Translates to: VHGSVKWQTGECPITLLSFYPHV*RRRILT Trigger: TGTCAGAATTCTTCTTCTCCAGACATGAGGATAAAA...AGATAACAGTGTAATTGGACATTCACCTGTTTGCCATTTCACACTTCCATGGAC 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000025160.9 ENSMUST00000115837.3 ENSMUST00000234736.2 |
||
| CDS CCA 90 bp | CATCCTCTTCTTCAACTCGGGACACTTCTCATCCTTTCCTTTTTCTaGGTGGACTTGTTTCTCTGGAGCAGAGACGTCCAAACCTGCCTC | + |
|
Preference number: 5 (lower is better) Translates to: HPLLQLGTLLILSFF*VDLFLWSRDVQTCL Trigger: GAGGCAGGTTTGGACGTCTCTGCTCCAGAGAAACAAGTCCACCCAGAAAAAGGAAAGGATGAGAAGTGTCCCGAGTTGAAGAAGAGGATG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000025160.9 ENSMUST00000115837.3 ENSMUST00000234736.2 |
||
| CDS TCA 90 bp | TCTCCTCTTCAAAGATCCTCTCTTCACAGTACTGCTTCTCTCTCATaGGATGGTCGTACACACCGTGCACGTGCTCCCTGTCAAATTGCA | + |
|
Preference number: 5 (lower is better) Translates to: SPLQRSSLHSTASLS*DGRTHRARAPCQIA Trigger: TGCAATTTGACAGGGAGCACGTGCACGGTGTGTACGACCATCTCATGAGAGAGAAGCAGTACTGTGAAGAGAGGATCTTTGAAGAGGAGA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000025160.9 ENSMUST00000115837.3 ENSMUST00000234736.2 |
||
| CDS TCA 90 bp | TGTTGCATTAGGCTTGAGGATTCCTCCTGCACAGCTAATATTTTCTaGATGCTGTTCTGGGAGTCTCCCTGGAACTTGGCCAGCTTGGTC | + |
|
Preference number: 5 (lower is better) Translates to: CCIRLEDSSCTANIF*MLFWESPWNLASLV Trigger: GACCAAGCTGGCCAAGTTCCAGGGAGACTCCCAGAACAGCATTCAGAAAATATTAGCTGTGCAGGAGGAATCCTCAAGCCTAATGCAACA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000025160.9 ENSMUST00000115837.3 ENSMUST00000234736.2 |
||
| CDS GCA 90 bp | GCATTAGGCTTGAGGATTCCTCCTGCACAGCTAATATTTTCTGAATaGTGTTCTGGGAGTCTCCCTGGAACTTGGCCAGCTTGGTCTTGT | + |
|
Preference number: 5 (lower is better) Translates to: ALGLRIPPAQLIFSE*CSGSLPGTWPAWSC Trigger: ACAAGACCAAGCTGGCCAAGTTCCAGGGAGACTCCCAGAACAGCATTCAGAAAATATTAGCTGTGCAGGAGGAATCCTCAAGCCTAATGC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000025160.9 ENSMUST00000115837.3 ENSMUST00000234736.2 |
||
| CDS-3UTR CAA 90 bp | GGAAATCTGGGGAAGCCAGCAGTCACTGTCAACACCGCCAGTAATTATTCTCTCTTTTTCTGGGTGGACTaGTTTCTCTGGAGCAGAGAC | + |
|
Preference number: 5 (lower is better) Translates to: GNLGKPAVTVNTASNYSLFFWVD*FLWSRD Trigger: GTCTCTGCTCCAGAGAAACAAGTCCACCCAGAAAAA...GAGAGAATAATTACTGGCGGTGTTGACAGTGACTGCTGGCTTCCCCAGATTTCC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000025160.9 ENSMUST00000234736.2 |
||
| CDS GCA 90 bp | CTCATGAGATGGTCGTACACACCGTGCACGTGCTCCCTGTCAAATTaGAGCTTGAAGAACTCTTCCTGCAACTTTTTCAGTCTTTCTTCA | + |
|
Preference number: 5 (lower is better) Translates to: LMRWSYTPCTCSLSN*SLKNSSCNFFSLSS Trigger: TGAAGAAAGACTGAAAAAGTTGCAGGAAGAGTTCTTCAAGCTGCAATTTGACAGGGAGCACGTGCACGGTGTGTACGACCATCTCATGAG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000025160.9 ENSMUST00000115837.3 ENSMUST00000234736.2 |
||
| CDS CCA 90 bp | GGGACACTTCTCATCCTTTCCTTTTTCTGGGTGGACTTGTTTCTCTaGAGCAGAGACGTCCAAACCTGCCTCTTTATCTTTTGTGACAGA | + |
|
Preference number: 5 (lower is better) Translates to: GTLLILSFFWVDLFL*SRDVQTCLFIFCDR Trigger: TCTGTCACAAAAGATAAAGAGGCAGGTTTGGACGTCTCTGCTCCAGAGAAACAAGTCCACCCAGAAAAAGGAAAGGATGAGAAGTGTCCC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000025160.9 ENSMUST00000115837.3 ENSMUST00000234736.2 |
||
| CDS-3UTR CAA 90 bp | GCAGTCACTGTCAACACCGCCAGTAATTATTCTCTCTTCCAATTAATGGTGACAACCTGGAGCTTCGCATaGGCTTTTTCCAGCTTCTCC | + |
|
Preference number: 5 (lower is better) Translates to: AVTVNTASNYSLFQLMVTTWSFA*AFSSFS Trigger: GGAGAAGCTGGAAAAAGCCAATGCGAAGCTCCAGGT...TGTCACCATTAATTGGAAGAGAGAATAATTACTGGCGGTGTTGACAGTGACTGC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000025160.9 ENSMUST00000234736.2 |
||
| CDS-3UTR CAA 90 bp | TGGCAAACAGGTGAATGTCCAATTACACTGTTATCTGAACTGTGCGACTTTTCCCATCCTAGCTCCTGCTaGCGCTTTTTCTCCAGCAGA | + |
|
Preference number: 5 (lower is better) Translates to: WQTGECPITLLSELCDFSHPSSC*RFFSSR Trigger: TCTGCTGGAGAAAAAGCGCAAGCAGGAGCTAGGATG...GGAAAAGTCGCACAGTTCAGATAACAGTGTAATTGGACATTCACCTGTTTGCCA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000025160.9 ENSMUST00000115837.3 ENSMUST00000234736.2 |
||
| CDS-3UTR CAA 90 bp | AAGCCAGCAGTCACTGTCAACACCGCCAGTAATTATTCTCTCTTCCAATTAATGCATCCTAGCTCCTGCTaGCGCTTTTTCTCCAGCAGA | + |
|
Preference number: 5 (lower is better) Translates to: KPAVTVNTASNYSLFQLMHPSSC*RFFSSR Trigger: TCTGCTGGAGAAAAAGCGCAAGCAGGAGCTAGGATG...CATTAATTGGAAGAGAGAATAATTACTGGCGGTGTTGACAGTGACTGCTGGCTT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000025160.9 ENSMUST00000234736.2 |
||
| CDS-3UTR CAA 90 bp | GGAAATCTGGGGAAGCCAGCAGTCACTGTCAACACCGCCAGTAATTATTCTCTCTCTCCAGTTCATTTGTaGTGCTCTGTGTTTCTCTCA | + |
|
Preference number: 5 (lower is better) Translates to: GNLGKPAVTVNTASNYSLSPVHL*CSVFLS Trigger: TGAGAGAAACACAGAGCACAACAAATGAACTGGAGA...GAGAGAATAATTACTGGCGGTGTTGACAGTGACTGCTGGCTTCCCCAGATTTCC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000025160.9 ENSMUST00000234736.2 |
||
| CDS-3UTR CAA 90 bp | GGCAAACAGGTGAATGTCCAATTACACTGTTATCTGAACTGTGCGACTTTTCCTGAGTCTCCCTGGAACTaGGCCAGCTTGGTCTTGTTA | + |
|
Preference number: 5 (lower is better) Translates to: GKQVNVQLHCYLNCATFPESPWN*ASLVLL Trigger: TAACAAGACCAAGCTGGCCAAGTTCCAGGGAGACTC...AGGAAAAGTCGCACAGTTCAGATAACAGTGTAATTGGACATTCACCTGTTTGCC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000025160.9 ENSMUST00000115837.3 ENSMUST00000234736.2 |
||
| CDS-3UTR CAA 90 bp | TCAGATGAGGCAAAGCCAATTGCAATCAGTCACCCAGAGCTGAAATTAGATCGTTGTGTTGCATTAGGCTaGAGGATTCCTCCTGCACAG | + |
|
Preference number: 5 (lower is better) Translates to: SDEAKPIAISHPELKLDRCVALG*RIPPAQ Trigger: CTGTGCAGGAGGAATCCTCAAGCCTAATGCAACACA...ACGATCTAATTTCAGCTCTGGGTGACTGATTGCAATTGGCTTTGCCTCATCTGA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000025160.9 ENSMUST00000234736.2 |
||
| CDS-3UTR CAA 90 bp | ACAGGTGAATGTCCAATTACACTGTTATCTGAACTGTGCGACTTTTCCTGTCTTACCTGGAGCTTCGCATaGGCTTTTTCCAGCTTCTCC | + |
|
Preference number: 5 (lower is better) Translates to: TGECPITLLSELCDFSCLTWSFA*AFSSFS Trigger: GGAGAAGCTGGAAAAAGCCAATGCGAAGCTCCAGGT...AAGACAGGAAAAGTCGCACAGTTCAGATAACAGTGTAATTGGACATTCACCTGT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000025160.9 ENSMUST00000115837.3 ENSMUST00000234736.2 |
||
| CDS-3UTR CAA 90 bp | GGAAGTGTGAAATGGCAAACAGGTGAATGTCCAATTACACTGTTATCTGAACTGACCTGGAGCTTCGCATaGGCTTTTTCCAGCTTCTCC | + |
|
Preference number: 5 (lower is better) Translates to: GSVKWQTGECPITLLSELTWSFA*AFSSFS Trigger: GGAGAAGCTGGAAAAAGCCAATGCGAAGCTCCAGGT...CAGTTCAGATAACAGTGTAATTGGACATTCACCTGTTTGCCATTTCACACTTCC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000025160.9 ENSMUST00000115837.3 ENSMUST00000234736.2 |
||
| CDS-3UTR CAA 90 bp | ACAGGTGAATGTCCAATTACACTGTTATCTGAACTGTGCGACTTTTCCTGTCTTCATCCTAGCTCCTGCTaGCGCTTTTTCTCCAGCAGA | + |
|
Preference number: 5 (lower is better) Translates to: TGECPITLLSELCDFSCLHPSSC*RFFSSR Trigger: TCTGCTGGAGAAAAAGCGCAAGCAGGAGCTAGGATG...AAGACAGGAAAAGTCGCACAGTTCAGATAACAGTGTAATTGGACATTCACCTGT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000025160.9 ENSMUST00000115837.3 ENSMUST00000234736.2 |
||
| CDS-3UTR CAA 90 bp | TCAGATGAGGCAAAGCCAATTGCAATCAGTCACCCAGAGCTGAAATTAGATCGTCTGGTCCAGCCTTTTTaGCAGCTGACAGAGCTTTTT | + |
|
Preference number: 5 (lower is better) Translates to: SDEAKPIAISHPELKLDRLVQPF*QLTELF Trigger: AAAAAGCTCTGTCAGCTGCAAAAAAGGCTGGACCAG...ACGATCTAATTTCAGCTCTGGGTGACTGATTGCAATTGGCTTTGCCTCATCTGA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000025160.9 ENSMUST00000234736.2 |
||
| CDS-3UTR CAA 90 bp | GAGCATCTAAGGGTGTCACATGGGTATAGGCACTGTTACAGTTTACACAAACTTCAGTCGGAAGTATTCTaGCCATTTCTGGTCCAGCCT | + |
|
Preference number: 5 (lower is better) Translates to: EHLRVSHGYRHCYSLHKLQSEVF*PFLVQP Trigger: AGGCTGGACCAGAAATGGCAAGAATACTTCCGACTG...AAGTTTGTGTAAACTGTAACAGTGCCTATACCCATGTGACACCCTTAGATGCTC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000025160.9 ENSMUST00000234736.2 |
||
| CDS-3UTR CAA 90 bp | GTCCATGGAAGTGTGAAATGGCAAACAGGTGAATGTCCAATTACACTGTTATCTGAGTCTCCCTGGAACTaGGCCAGCTTGGTCTTGTTA | + |
|
Preference number: 5 (lower is better) Translates to: VHGSVKWQTGECPITLLSESPWN*ASLVLL Trigger: TAACAAGACCAAGCTGGCCAAGTTCCAGGGAGACTC...AGATAACAGTGTAATTGGACATTCACCTGTTTGCCATTTCACACTTCCATGGAC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000025160.9 ENSMUST00000115837.3 ENSMUST00000234736.2 |
||
| CDS-3UTR CAA 90 bp | AAGCCAGCAGTCACTGTCAACACCGCCAGTAATTATTCTCTCTTCCAATTAATGTGTGTTGCATTAGGCTaGAGGATTCCTCCTGCACAG | + |
|
Preference number: 5 (lower is better) Translates to: KPAVTVNTASNYSLFQLMCVALG*RIPPAQ Trigger: CTGTGCAGGAGGAATCCTCAAGCCTAATGCAACACA...CATTAATTGGAAGAGAGAATAATTACTGGCGGTGTTGACAGTGACTGCTGGCTT 46% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000025160.9 ENSMUST00000234736.2 |
||
| CDS GCA 90 bp | TCGTCCTTTCTAGGTTCATTATCCTTATTTCCTTACTCAGCTCAATaGACTTCTCGTGGAGAGCAACTGTTTGGCCTCTCGCTATCTCTA | + |
|
Preference number: 5 (lower is better) Translates to: SSFLGSLSLFPYSAQ*TSRGEQLFGLSLSL Trigger: TAGAGATAGCGAGAGGCCAAACAGTTGCTCTCCACGAGAAGTGCATTGAGCTGAGTAAGGAAATAAGGATAATGAACCTAGAAAGGACGA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000025160.9 ENSMUST00000115837.3 ENSMUST00000234736.2 |
||
| CDS-3UTR CAA 90 bp | TGGCAAACAGGTGAATGTCCAATTACACTGTTATCTGAACTGTGCGACTTTTCCGTGCTCCCTGTCAAATaGCAGCTTGAAGAACTCTTC | + |
|
Preference number: 5 (lower is better) Translates to: WQTGECPITLLSELCDFSVLPVK*QLEELF Trigger: GAAGAGTTCTTCAAGCTGCAATTTGACAGGGAGCAC...GGAAAAGTCGCACAGTTCAGATAACAGTGTAATTGGACATTCACCTGTTTGCCA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000025160.9 ENSMUST00000115837.3 ENSMUST00000234736.2 |
||
| CDS-3UTR CAA 90 bp | GGCAAACAGGTGAATGTCCAATTACACTGTTATCTGAACTGTGCGACTTTTCCTGTGCTCCCTGTCAAATaGCAGCTTGAAGAACTCTTC | + |
|
Preference number: 5 (lower is better) Translates to: GKQVNVQLHCYLNCATFPVLPVK*QLEELF Trigger: GAAGAGTTCTTCAAGCTGCAATTTGACAGGGAGCAC...AGGAAAAGTCGCACAGTTCAGATAACAGTGTAATTGGACATTCACCTGTTTGCC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000025160.9 ENSMUST00000115837.3 ENSMUST00000234736.2 |
||
| CDS-3UTR CAA 90 bp | GGCAAACAGGTGAATGTCCAATTACACTGTTATCTGAACTGTGCGACTTTTCCTCTGGTCCAGCCTTTTTaGCAGCTGACAGAGCTTTTT | + |
|
Preference number: 5 (lower is better) Translates to: GKQVNVQLHCYLNCATFPLVQPF*QLTELF Trigger: AAAAAGCTCTGTCAGCTGCAAAAAAGGCTGGACCAG...AGGAAAAGTCGCACAGTTCAGATAACAGTGTAATTGGACATTCACCTGTTTGCC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000025160.9 ENSMUST00000115837.3 ENSMUST00000234736.2 |
||
| CDS-3UTR CAA 90 bp | GGAAGTGTGAAATGGCAAACAGGTGAATGTCCAATTACACTGTTATCTGAACTGCAGTCGGAAGTATTCTaGCCATTTCTGGTCCAGCCT | + |
|
Preference number: 5 (lower is better) Translates to: GSVKWQTGECPITLLSELQSEVF*PFLVQP Trigger: AGGCTGGACCAGAAATGGCAAGAATACTTCCGACTG...CAGTTCAGATAACAGTGTAATTGGACATTCACCTGTTTGCCATTTCACACTTCC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000025160.9 ENSMUST00000115837.3 ENSMUST00000234736.2 |
||
| CDS-3UTR CAA 90 bp | ACAGGTGAATGTCCAATTACACTGTTATCTGAACTGTGCGACTTTTCCTGTCTTCAGTCGGAAGTATTCTaGCCATTTCTGGTCCAGCCT | + |
|
Preference number: 5 (lower is better) Translates to: TGECPITLLSELCDFSCLQSEVF*PFLVQP Trigger: AGGCTGGACCAGAAATGGCAAGAATACTTCCGACTG...AAGACAGGAAAAGTCGCACAGTTCAGATAACAGTGTAATTGGACATTCACCTGT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000025160.9 ENSMUST00000115837.3 ENSMUST00000234736.2 |
||
| CDS-3UTR CAA 90 bp | AAATGGCAAACAGGTGAATGTCCAATTACACTGTTATCTGAACTGTGCGACTTTGAGTCTCCCTGGAACTaGGCCAGCTTGGTCTTGTTA | + |
|
Preference number: 5 (lower is better) Translates to: KWQTGECPITLLSELCDFESPWN*ASLVLL Trigger: TAACAAGACCAAGCTGGCCAAGTTCCAGGGAGACTC...AAAGTCGCACAGTTCAGATAACAGTGTAATTGGACATTCACCTGTTTGCCATTT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000025160.9 ENSMUST00000115837.3 ENSMUST00000234736.2 |
||
| CDS-3UTR CAA 90 bp | ACAGGTGAATGTCCAATTACACTGTTATCTGAACTGTGCGACTTTTCCTGTCTTTGTGTTGCATTAGGCTaGAGGATTCCTCCTGCACAG | + |
|
Preference number: 5 (lower is better) Translates to: TGECPITLLSELCDFSCLCVALG*RIPPAQ Trigger: CTGTGCAGGAGGAATCCTCAAGCCTAATGCAACACA...AAGACAGGAAAAGTCGCACAGTTCAGATAACAGTGTAATTGGACATTCACCTGT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000025160.9 ENSMUST00000115837.3 ENSMUST00000234736.2 |
||
| CDS GCA 90 bp | CAAACTTTTTATGGTAACGCTCTTTCAGACATCCTAGCTCCTGCTTaGGCTTTTTCTCCAGCAGAACACTATGAGAAGCCATGTAGTCTA | + |
|
Preference number: 5 (lower is better) Translates to: QTFYGNALSDILAPA*AFSPAEHYEKPCSL Trigger: TAGACTACATGGCTTCTCATAGTGTTCTGCTGGAGAAAAAGCGCAAGCAGGAGCTAGGATGTCTGAAAGAGCGTTACCATAAAAAGTTTG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 3 transcripts: ENSMUST00000025160.9 ENSMUST00000115837.3 ENSMUST00000234736.2 |
||
| CDS-3UTR CAA 90 bp | TTTTTCGTCCATGGAAGTGTGAAATGGCAAACAGGTGAATGTCCAATTACACTGTTTTTCTGGGTGGACTaGTTTCTCTGGAGCAGAGAC | + |
|
Preference number: 5 (lower is better) Translates to: FFVHGSVKWQTGECPITLFFWVD*FLWSRD Trigger: GTCTCTGCTCCAGAGAAACAAGTCCACCCAGAAAAA...CAGTGTAATTGGACATTCACCTGTTTGCCATTTCACACTTCCATGGACGAAAAA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 3 transcripts: ENSMUST00000025160.9 ENSMUST00000115837.3 ENSMUST00000234736.2 |
||
| CDS-3UTR CAA 90 bp | AGTGTGAAATGGCAAACAGGTGAATGTCCAATTACACTGTTATCTGAACTGTGCGTGCTCCCTGTCAAATaGCAGCTTGAAGAACTCTTC | + |
|
Preference number: 5 (lower is better) Translates to: SVKWQTGECPITLLSELCVLPVK*QLEELF Trigger: GAAGAGTTCTTCAAGCTGCAATTTGACAGGGAGCAC...GCACAGTTCAGATAACAGTGTAATTGGACATTCACCTGTTTGCCATTTCACACT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000025160.9 ENSMUST00000115837.3 ENSMUST00000234736.2 |
||
| CDS-3UTR CAA 90 bp | ACAGGTGAATGTCCAATTACACTGTTATCTGAACTGTGCGACTTTTCCTGTCTTCTGGTCCAGCCTTTTTaGCAGCTGACAGAGCTTTTT | + |
|
Preference number: 5 (lower is better) Translates to: TGECPITLLSELCDFSCLLVQPF*QLTELF Trigger: AAAAAGCTCTGTCAGCTGCAAAAAAGGCTGGACCAG...AAGACAGGAAAAGTCGCACAGTTCAGATAACAGTGTAATTGGACATTCACCTGT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000025160.9 ENSMUST00000115837.3 ENSMUST00000234736.2 |
||
| CDS-3UTR CAA 90 bp | GGCAAACAGGTGAATGTCCAATTACACTGTTATCTGAACTGTGCGACTTTTCCTTCTCCAGTTCATTTGTaGTGCTCTGTGTTTCTCTCA | + |
|
Preference number: 5 (lower is better) Translates to: GKQVNVQLHCYLNCATFPSPVHL*CSVFLS Trigger: TGAGAGAAACACAGAGCACAACAAATGAACTGGAGA...AGGAAAAGTCGCACAGTTCAGATAACAGTGTAATTGGACATTCACCTGTTTGCC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000025160.9 ENSMUST00000115837.3 ENSMUST00000234736.2 |
||
| CDS GCA 90 bp | GTCTTTGAGCTCCTTTATTTGAAGACATGTTTTACCTGTATCAAGTaGATCCTCATTGGTAGTAGGTTGAGCTGGCTCTTTCTCGTTTTC | + |
|
Preference number: 5 (lower is better) Translates to: VFELLYLKTCFTCIK*ILIGSRLSWLFLVF Trigger: GAAAACGAGAAAGAGCCAGCTCAACCTACTACCAATGAGGATGCACTTGATACAGGTAAAACATGTCTTCAAATAAAGGAGCTCAAAGAC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000025160.9 ENSMUST00000115837.3 ENSMUST00000234661.2 ENSMUST00000234736.2 |
||
| CDS GCA 90 bp | AGCCTTTTATCCTCATGTCTGGAGAAGAAGAATTCTGACAAGCCTTaGATTCTGGCATTTTCTGCAAGCATTAATGCCCTTTCTTTGTCT | + |
|
Preference number: 5 (lower is better) Translates to: SLLSSCLEKKNSDKP*ILAFSASINALSLS Trigger: AGACAAAGAAAGGGCATTAATGCTTGCAGAAAATGCCAGAATGCAAGGCTTGTCAGAATTCTTCTTCTCCAGACATGAGGATAAAAGGCT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000025160.9 ENSMUST00000115837.3 ENSMUST00000234736.2 |
||
| CDS-3UTR CAA 90 bp | ATCGTTCCTGACAGCGGCATGAAAGTCACCTGTTTCATTGTTATGGATTTGCTGATGTGGGAAATCATTTaGTTTACACATGGTTTAGGG | + |
|
Preference number: 5 (lower is better) Translates to: IVPDSGMKVTCFIVMDLLMWEII*FTHGLG Trigger: CCCTAAACCATGTGTAAACAAAATGATTTCCCACAT...CAGCAAATCCATAACAATGAAACAGGTGACTTTCATGCCGCTGTCAGGAACGAT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000025160.9 ENSMUST00000234736.2 |
||
| CDS-3UTR CAA 90 bp | CCAGCAGTCACTGTCAACACCGCCAGTAATTATTCTCTCTTCCAATTAATGGTGGTCATCTGTGATGGATaGAATTTCAGATTGAATCCT | + |
|
Preference number: 5 (lower is better) Translates to: PAVTVNTASNYSLFQLMVVICDG*NFRLNP Trigger: AGGATTCAATCTGAAATTCAATCCATCACAGATGAC...CACCATTAATTGGAAGAGAGAATAATTACTGGCGGTGTTGACAGTGACTGCTGG 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000025160.9 ENSMUST00000234736.2 |
||
| CDS TCA 90 bp | GTTTCTCTGGAGCAGAGACGTCCAAACCTGCCTCTTTATCTTTTGTaGCAGAAGTCCATTCTTCAAAAGAAGCTTCAAATTGTGTCAAAT | + |
|
Preference number: 5 (lower is better) Translates to: VSLEQRRPNLPLYLL*QKSILQKKLQIVSN Trigger: ATTTGACACAATTTGAAGCTTCTTTTGAAGAATGGACTTCTGTCACAAAAGATAAAGAGGCAGGTTTGGACGTCTCTGCTCCAGAGAAAC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000025160.9 ENSMUST00000115837.3 ENSMUST00000234736.2 |
||
| CDS-3UTR CAA 90 bp | TGGCAAACAGGTGAATGTCCAATTACACTGTTATCTGAACTGTGCGACTTTTCCATGTGGGAAATCATTTaGTTTACACATGGTTTAGGG | + |
|
Preference number: 5 (lower is better) Translates to: WQTGECPITLLSELCDFSMWEII*FTHGLG Trigger: CCCTAAACCATGTGTAAACAAAATGATTTCCCACAT...GGAAAAGTCGCACAGTTCAGATAACAGTGTAATTGGACATTCACCTGTTTGCCA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000025160.9 ENSMUST00000115837.3 ENSMUST00000234736.2 |
||
| CDS-3UTR CAA 90 bp | CAAACAGGTGAATGTCCAATTACACTGTTATCTGAACTGTGCGACTTTTCCTGTAATTCTCCAGTTCATTaGTTGTGCTCTGTGTTTCTC | + |
|
Preference number: 5 (lower is better) Translates to: QTGECPITLLSELCDFSCNSPVH*LCSVFL Trigger: GAGAAACACAGAGCACAACAAATGAACTGGAGAATT...ACAGGAAAAGTCGCACAGTTCAGATAACAGTGTAATTGGACATTCACCTGTTTG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000025160.9 ENSMUST00000115837.3 ENSMUST00000234736.2 |
||
| CDS-3UTR CAA 90 bp | AGTGTGAAATGGCAAACAGGTGAATGTCCAATTACACTGTTATCTGAACTGTGCAATTCTCCAGTTCATTaGTTGTGCTCTGTGTTTCTC | + |
|
Preference number: 5 (lower is better) Translates to: SVKWQTGECPITLLSELCNSPVH*LCSVFL Trigger: GAGAAACACAGAGCACAACAAATGAACTGGAGAATT...GCACAGTTCAGATAACAGTGTAATTGGACATTCACCTGTTTGCCATTTCACACT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000025160.9 ENSMUST00000115837.3 ENSMUST00000234736.2 |
||
| CDS-3UTR CAA 90 bp | GTCCATGGAAGTGTGAAATGGCAAACAGGTGAATGTCCAATTACACTGTTATCTATGTGGGAAATCATTTaGTTTACACATGGTTTAGGG | + |
|
Preference number: 5 (lower is better) Translates to: VHGSVKWQTGECPITLLSMWEII*FTHGLG Trigger: CCCTAAACCATGTGTAAACAAAATGATTTCCCACAT...AGATAACAGTGTAATTGGACATTCACCTGTTTGCCATTTCACACTTCCATGGAC 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000025160.9 ENSMUST00000115837.3 ENSMUST00000234736.2 |
||
| CDS-3UTR CAA 90 bp | AAATGGCAAACAGGTGAATGTCCAATTACACTGTTATCTGAACTGTGCGACTTTAATTCTCCAGTTCATTaGTTGTGCTCTGTGTTTCTC | + |
|
Preference number: 5 (lower is better) Translates to: KWQTGECPITLLSELCDFNSPVH*LCSVFL Trigger: GAGAAACACAGAGCACAACAAATGAACTGGAGAATT...AAAGTCGCACAGTTCAGATAACAGTGTAATTGGACATTCACCTGTTTGCCATTT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000025160.9 ENSMUST00000115837.3 ENSMUST00000234736.2 |
||
| CDS-3UTR CAA 90 bp | GTCCATGGAAGTGTGAAATGGCAAACAGGTGAATGTCCAATTACACTGTTATCTGTCATCTGTGATGGATaGAATTTCAGATTGAATCCT | + |
|
Preference number: 5 (lower is better) Translates to: VHGSVKWQTGECPITLLSVICDG*NFRLNP Trigger: AGGATTCAATCTGAAATTCAATCCATCACAGATGAC...AGATAACAGTGTAATTGGACATTCACCTGTTTGCCATTTCACACTTCCATGGAC 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000025160.9 ENSMUST00000115837.3 ENSMUST00000234736.2 |
||
| CDS-3UTR CAA 90 bp | GGAAGTGTGAAATGGCAAACAGGTGAATGTCCAATTACACTGTTATCTGAACTGGTCATCTGTGATGGATaGAATTTCAGATTGAATCCT | + |
|
Preference number: 5 (lower is better) Translates to: GSVKWQTGECPITLLSELVICDG*NFRLNP Trigger: AGGATTCAATCTGAAATTCAATCCATCACAGATGAC...CAGTTCAGATAACAGTGTAATTGGACATTCACCTGTTTGCCATTTCACACTTCC 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000025160.9 ENSMUST00000115837.3 ENSMUST00000234736.2 |
||
| CDS CCA 90 bp | CTGTATTTGTTGATTTACTTTCATAAAGCCTTTTATCCTCATGTCTaGAGAAGAAGAATTCTGACAAGCCTTGCATTCTGGCATTTTCTG | + |
|
Preference number: 5 (lower is better) Translates to: LYLLIYFHKAFYPHV*RRRILTSLAFWHFL Trigger: CAGAAAATGCCAGAATGCAAGGCTTGTCAGAATTCTTCTTCTCCAGACATGAGGATAAAAGGCTTTATGAAAGTAAATCAACAAATACAG 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000025160.9 ENSMUST00000115837.3 ENSMUST00000234736.2 |
||
| CDS GCA 90 bp | TGCACCTTCACATTTATCCACAGACTCTTTAAGCTCTTCATGAATTaGTCTAAATTTTTCCATTACCTCAAACTTTTTATGGTAACGCTC | + |
|
Preference number: 5 (lower is better) Translates to: CTFTFIHRLFKLFMN*SKFFHYLKLFMVTL Trigger: GAGCGTTACCATAAAAAGTTTGAGGTAATGGAAAAATTTAGAGCAATTCATGAAGAGCTTAAAGAGTCTGTGGATAAATGTGAAGGTGCA 36% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 3 transcripts: ENSMUST00000025160.9 ENSMUST00000115837.3 ENSMUST00000234736.2 |
||
| CDS CAA 90 bp | GAGCTTCGCATTGGCTTTTTCCAGCTTCTCCTTCCGCTCCTGCAGTaGCTCCACCTTAAGGGCAATGTCTTCAAGATAGCTACGCAGCTC | + |
|
Preference number: 6 (lower is better) Translates to: ELRIGFFQLLLPLLQ*LHLKGNVFKIATQL Trigger: GAGCTGCGTAGCTATCTTGAAGACATTGCCCTTAAGGTGGAGCAACTGCAGGAGCGGAAGGAGAAGCTGGAAAAAGCCAATGCGAAGCTC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000025160.9 ENSMUST00000115837.3 ENSMUST00000234736.2 |
||
| CDS TCA 72 bp | CAAAGATCCTCTCTTCACAGTACTGCTTCTCTCTCATaGGATGGTCGTACACACCGTGCACGTGCTCCCTGT | + |
|
Preference number: 6 (lower is better) Translates to: QRSSLHSTASLS*DGRTHRARAPC Trigger: ACAGGGAGCACGTGCACGGTGTGTACGACCATCTCATGAGAGAGAAGCAGTACTGTGAAGAGAGGATCTTTG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000025160.9 ENSMUST00000115837.3 ENSMUST00000234736.2 |
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| CDS GCA 72 bp | TTCGCATTGGCTTTTTCCAGCTTCTCCTTCCGCTCCTaGAGTTGCTCCACCTTAAGGGCAATGTCTTCAAGA | + |
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Preference number: 6 (lower is better) Translates to: FALAFSSFSFRS*SCSTLRAMSSR Trigger: TCTTGAAGACATTGCCCTTAAGGTGGAGCAACTGCAGGAGCGGAAGGAGAAGCTGGAAAAAGCCAATGCGAA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000025160.9 ENSMUST00000115837.3 ENSMUST00000234736.2 |
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| CDS GCA 72 bp | CTCCTCTCCTCTTCAAAGATCCTCTCTTCACAGTACTaGTTCTCTCTCATGAGATGGTCGTACACACCGTGC | + |
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Preference number: 6 (lower is better) Translates to: LLSSSKILSSQY*FSLMRWSYTPC Trigger: GCACGGTGTGTACGACCATCTCATGAGAGAGAAGCAGTACTGTGAAGAGAGGATCTTTGAAGAGGAGAGGAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000025160.9 ENSMUST00000115837.3 ENSMUST00000234736.2 |
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| CDS GCA 72 bp | TGGTCGTACACACCGTGCACGTGCTCCCTGTCAAATTaGAGCTTGAAGAACTCTTCCTGCAACTTTTTCAGT | + |
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Preference number: 6 (lower is better) Translates to: WSYTPCTCSLSN*SLKNSSCNFFS Trigger: ACTGAAAAAGTTGCAGGAAGAGTTCTTCAAGCTGCAATTTGACAGGGAGCACGTGCACGGTGTGTACGACCA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000025160.9 ENSMUST00000115837.3 ENSMUST00000234736.2 |
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| CDS GCA 72 bp | TTGAGGATTCCTCCTGCACAGCTAATATTTTCTGAATaGTGTTCTGGGAGTCTCCCTGGAACTTGGCCAGCT | + |
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Preference number: 6 (lower is better) Translates to: LRIPPAQLIFSE*CSGSLPGTWPA Trigger: AGCTGGCCAAGTTCCAGGGAGACTCCCAGAACAGCATTCAGAAAATATTAGCTGTGCAGGAGGAATCCTCAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000025160.9 ENSMUST00000115837.3 ENSMUST00000234736.2 |
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| CDS CCA 72 bp | CTTCAACTCGGGACACTTCTCATCCTTTCCTTTTTCTaGGTGGACTTGTTTCTCTGGAGCAGAGACGTCCAA | + |
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Preference number: 6 (lower is better) Translates to: LQLGTLLILSFF*VDLFLWSRDVQ Trigger: TTGGACGTCTCTGCTCCAGAGAAACAAGTCCACCCAGAAAAAGGAAAGGATGAGAAGTGTCCCGAGTTGAAG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000025160.9 ENSMUST00000115837.3 ENSMUST00000234736.2 |
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| CDS CAA 72 bp | ATGGTCGTACACACCGTGCACGTGCTCCCTGTCAAATaGCAGCTTGAAGAACTCTTCCTGCAACTTTTTCAG | + |
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Preference number: 6 (lower is better) Translates to: MVVHTVHVLPVK*QLEELFLQLFQ Trigger: CTGAAAAAGTTGCAGGAAGAGTTCTTCAAGCTGCAATTTGACAGGGAGCACGTGCACGGTGTGTACGACCAT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000025160.9 ENSMUST00000115837.3 ENSMUST00000234736.2 |
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| CDS CAA 90 bp | CTTCAACTCGGGACACTTCTCATCCTTTCCTTTTTCTGGGTGGACTaGTTTCTCTGGAGCAGAGACGTCCAAACCTGCCTCTTTATCTTT | + |
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Preference number: 6 (lower is better) Translates to: LQLGTLLILSFFWVD*FLWSRDVQTCLFIF Trigger: AAAGATAAAGAGGCAGGTTTGGACGTCTCTGCTCCAGAGAAACAAGTCCACCCAGAAAAAGGAAAGGATGAGAAGTGTCCCGAGTTGAAG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000025160.9 ENSMUST00000115837.3 ENSMUST00000234736.2 |
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| CDS CAA 90 bp | TCTCATGAGATGGTCGTACACACCGTGCACGTGCTCCCTGTCAAATaGCAGCTTGAAGAACTCTTCCTGCAACTTTTTCAGTCTTTCTTC | + |
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Preference number: 6 (lower is better) Translates to: SHEMVVHTVHVLPVK*QLEELFLQLFQSFF Trigger: GAAGAAAGACTGAAAAAGTTGCAGGAAGAGTTCTTCAAGCTGCAATTTGACAGGGAGCACGTGCACGGTGTGTACGACCATCTCATGAGA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000025160.9 ENSMUST00000115837.3 ENSMUST00000234736.2 |
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| CDS GCA 72 bp | TATGGTAACGCTCTTTCAGACATCCTAGCTCCTGCTTaGGCTTTTTCTCCAGCAGAACACTATGAGAAGCCA | + |
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Preference number: 6 (lower is better) Translates to: YGNALSDILAPA*AFSPAEHYEKP Trigger: TGGCTTCTCATAGTGTTCTGCTGGAGAAAAAGCGCAAGCAGGAGCTAGGATGTCTGAAAGAGCGTTACCATA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000025160.9 ENSMUST00000115837.3 ENSMUST00000234736.2 |
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| CDS CCA 72 bp | GCTTCTGCTCTGTCAGTTTCCAGACTTTTAATGAGGTaGATGGCCTCTGATAGCAATGTCTCCATCCTCTTC | + |
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Preference number: 6 (lower is better) Translates to: ASALSVSRLLMR*MASDSNVSILF Trigger: GAAGAGGATGGAGACATTGCTATCAGAGGCCATCCACCTCATTAAAAGTCTGGAAACTGACAGAGCAGAAGC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000025160.9 ENSMUST00000115837.3 ENSMUST00000234736.2 |
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| CDS TCA 72 bp | TTCCGTATATTATGCAGCATCTTAGAGTGCTGTCTGTaGAGGTACCTGATTCTCACAGCCTCGGCTTCTAAC | + |
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Preference number: 6 (lower is better) Translates to: FRILCSILECCL*RYLILTASASN Trigger: GTTAGAAGCCGAGGCTGTGAGAATCAGGTACCTTCACAGACAGCACTCTAAGATGCTGCATAATATACGGAA 46% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000025160.9 ENSMUST00000115837.3 ENSMUST00000234736.2 |
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| CDS TCA 72 bp | ACACACCGTGCACGTGCTCCCTGTCAAATTGCAGCTTaGAGAACTCTTCCTGCAACTTTTTCAGTCTTTCTT | + |
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Preference number: 6 (lower is better) Translates to: THRARAPCQIAA*RTLPATFSVFL Trigger: AAGAAAGACTGAAAAAGTTGCAGGAAGAGTTCTTCAAGCTGCAATTTGACAGGGAGCACGTGCACGGTGTGT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000025160.9 ENSMUST00000115837.3 ENSMUST00000234736.2 |
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| CDS GCA 72 bp | GTGGACTTGTTTCTCTGGAGCAGAGACGTCCAAACCTaGCTCTTTATCTTTTGTGACAGAAGTCCATTCTTC | + |
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Preference number: 6 (lower is better) Translates to: VDLFLWSRDVQT*LFIFCDRSPFF Trigger: GAAGAATGGACTTCTGTCACAAAAGATAAAGAGGCAGGTTTGGACGTCTCTGCTCCAGAGAAACAAGTCCAC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000025160.9 ENSMUST00000115837.3 ENSMUST00000234736.2 |
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| CDS GCA 72 bp | CTAGGTTCATTATCCTTATTTCCTTACTCAGCTCAATaGACTTCTCGTGGAGAGCAACTGTTTGGCCTCTCG | + |
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Preference number: 6 (lower is better) Translates to: LGSLSLFPYSAQ*TSRGEQLFGLS Trigger: CGAGAGGCCAAACAGTTGCTCTCCACGAGAAGTGCATTGAGCTGAGTAAGGAAATAAGGATAATGAACCTAG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000025160.9 ENSMUST00000115837.3 ENSMUST00000234736.2 |
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| CDS CCA 72 bp | CTCATCCTTTCCTTTTTCTGGGTGGACTTGTTTCTCTaGAGCAGAGACGTCCAAACCTGCCTCTTTATCTTT | + |
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Preference number: 6 (lower is better) Translates to: LILSFFWVDLFL*SRDVQTCLFIF Trigger: AAAGATAAAGAGGCAGGTTTGGACGTCTCTGCTCCAGAGAAACAAGTCCACCCAGAAAAAGGAAAGGATGAG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000025160.9 ENSMUST00000115837.3 ENSMUST00000234736.2 |
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| CDS CAA 72 bp | TACACACCGTGCACGTGCTCCCTGTCAAATTGCAGCTaGAAGAACTCTTCCTGCAACTTTTTCAGTCTTTCT | + |
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Preference number: 6 (lower is better) Translates to: YTPCTCSLSNCS*KNSSCNFFSLS Trigger: AGAAAGACTGAAAAAGTTGCAGGAAGAGTTCTTCAAGCTGCAATTTGACAGGGAGCACGTGCACGGTGTGTA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000025160.9 ENSMUST00000115837.3 ENSMUST00000234736.2 |
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| CDS CAA 72 bp | ACTCAGCTCAATGCACTTCTCGTGGAGAGCAACTGTTaGGCCTCTCGCTATCTCTATTTCTTCATGAATTAT | + |
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Preference number: 6 (lower is better) Translates to: TQLNALLVESNC*ASRYLYFFMNY Trigger: ATAATTCATGAAGAAATAGAGATAGCGAGAGGCCAAACAGTTGCTCTCCACGAGAAGTGCATTGAGCTGAGT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000025160.9 ENSMUST00000115837.3 ENSMUST00000234736.2 |
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| CDS TCA 72 bp | TTACCAAAGTACAACTATGTCGCCGACTTGGGTAGCTaGAGTAGATGGCTTTATTCACGTCTTCTGTATTTG | + |
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Preference number: 6 (lower is better) Translates to: LPKYNYVADLGS*SRWLYSRLLYL Trigger: CAAATACAGAAGACGTGAATAAAGCCATCTACTTCAGCTACCCAAGTCGGCGACATAGTTGTACTTTGGTAA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000025160.9 ENSMUST00000115837.3 ENSMUST00000234736.2 |
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| CDS CCA 72 bp | GTCTGGAGAAGAAGAATTCTGACAAGCCTTGCATTCTaGCATTTTCTGCAAGCATTAATGCCCTTTCTTTGT | + |
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Preference number: 6 (lower is better) Translates to: VWRRRILTSLAF*HFLQALMPFLC Trigger: ACAAAGAAAGGGCATTAATGCTTGCAGAAAATGCCAGAATGCAAGGCTTGTCAGAATTCTTCTTCTCCAGAC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000025160.9 ENSMUST00000115837.3 ENSMUST00000234736.2 |
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| CDS CAA 72 bp | TCGGAAGTATTCTTGCCATTTCTGGTCCAGCCTTTTTaGCAGCTGACAGAGCTTTTTCTTATCAGAAAGAGA | + |
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Preference number: 6 (lower is better) Translates to: SEVFLPFLVQPF*QLTELFLIRKR Trigger: TCTCTTTCTGATAAGAAAAAGCTCTGTCAGCTGCAAAAAAGGCTGGACCAGAAATGGCAAGAATACTTCCGA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 3 transcripts: ENSMUST00000025160.9 ENSMUST00000115837.3 ENSMUST00000234736.2 |
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| CDS CAA 90 bp | TATTTCCTTACTCAGCTCAATGCACTTCTCGTGGAGAGCAACTGTTaGGCCTCTCGCTATCTCTATTTCTTCATGAATTATGGATCTTTT | + |
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Preference number: 6 (lower is better) Translates to: YFLTQLNALLVESNC*ASRYLYFFMNYGSF Trigger: AAAAGATCCATAATTCATGAAGAAATAGAGATAGCGAGAGGCCAAACAGTTGCTCTCCACGAGAAGTGCATTGAGCTGAGTAAGGAAATA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000025160.9 ENSMUST00000115837.3 ENSMUST00000234736.2 |
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| CDS TCA 72 bp | GAGCAGAGACGTCCAAACCTGCCTCTTTATCTTTTGTaGCAGAAGTCCATTCTTCAAAAGAAGCTTCAAATT | + |
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Preference number: 6 (lower is better) Translates to: EQRRPNLPLYLL*QKSILQKKLQI Trigger: AATTTGAAGCTTCTTTTGAAGAATGGACTTCTGTCACAAAAGATAAAGAGGCAGGTTTGGACGTCTCTGCTC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000025160.9 ENSMUST00000115837.3 ENSMUST00000234736.2 |
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| CDS GCA 72 bp | CTCCTTTATTTGAAGACATGTTTTACCTGTATCAAGTaGATCCTCATTGGTAGTAGGTTGAGCTGGCTCTTT | + |
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Preference number: 6 (lower is better) Translates to: LLYLKTCFTCIK*ILIGSRLSWLF Trigger: AAAGAGCCAGCTCAACCTACTACCAATGAGGATGCACTTGATACAGGTAAAACATGTCTTCAAATAAAGGAG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000025160.9 ENSMUST00000115837.3 ENSMUST00000234661.2 ENSMUST00000234736.2 |
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| CDS GCA 72 bp | CTTAAGGGCAATGTCTTCAAGATAGCTACGCAGCTCTaGATTAATTTTGGAGAAGTTCTCATGTTCTTTCTG | + |
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Preference number: 6 (lower is better) Translates to: LKGNVFKIATQL*INFGEVLMFFL Trigger: CAGAAAGAACATGAGAACTTCTCCAAAATTAATGCAGAGCTGCGTAGCTATCTTGAAGACATTGCCCTTAAG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000025160.9 ENSMUST00000115837.3 ENSMUST00000234736.2 |
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| CDS TCA 72 bp | GATTCTTTCTCCTTTAAGAAAATAAGCTGTGCGCTTTaGTATTCTTTGGCTAAACGCAGGTTTTCTTCCAGT | + |
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Preference number: 6 (lower is better) Translates to: DSFSFKKISCAL*YSLAKRRFSSS Trigger: ACTGGAAGAAAACCTGCGTTTAGCCAAAGAATATCAAAGCGCACAGCTTATTTTCTTAAAGGAGAAAGAATC 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000025160.9 ENSMUST00000115837.3 ENSMUST00000234736.2 |
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| CDS CCA 72 bp | TTGATTTACTTTCATAAAGCCTTTTATCCTCATGTCTaGAGAAGAAGAATTCTGACAAGCCTTGCATTCTGG | + |
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Preference number: 6 (lower is better) Translates to: LIYFHKAFYPHV*RRRILTSLAFW Trigger: CCAGAATGCAAGGCTTGTCAGAATTCTTCTTCTCCAGACATGAGGATAAAAGGCTTTATGAAAGTAAATCAA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000025160.9 ENSMUST00000115837.3 ENSMUST00000234736.2 |
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| CDS GCA 72 bp | TTCATTCTCTACTTTCATATTCTTAAGCCTTGCTTTTaGACCTTCACATTTATCCACAGACTCTTTAAGCTC | + |
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Preference number: 6 (lower is better) Translates to: FILYFHILKPCF*TFTFIHRLFKL Trigger: GAGCTTAAAGAGTCTGTGGATAAATGTGAAGGTGCAAAAGCAAGGCTTAAGAATATGAAAGTAGAGAATGAA 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000025160.9 ENSMUST00000115837.3 ENSMUST00000234736.2 |
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