Pregenerated sensors for CCDC174 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000034083Ensembl transcript IDs: ENSMUST00000037783.7, ENSMUST00000136090.8
Found 128 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | GCTGTTCTGGGCCACAGGAGCTGGGGCAGGTACAGGCTTTGGCTCTaGGGGCTCAGGAACAACTCCATCTGCTTCTCTGCCTTCTTCTTC | + |
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Preference number: 1 (lower is better) Translates to: AVLGHRSWGRYRLWL*GLRNNSICFSAFFF Trigger: GAAGAAGAAGGCAGAGAAGCAGATGGAGTTGTTCCTGAGCCCTCAGAGCCAAAGCCTGTACCTGCCCCAGCTCCTGTGGCCCAGAACAGC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000136090.8 |
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| 3UTR GCA 90 bp | GTTCAACCGCCTCCTTGGTGCTGTGCTCTCCTGCTCCACTGGATCTaGTGTGAAGGCTTCAGAACTGGCTCCCTATACTGCCCAGTCCCT | + |
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Preference number: 1 (lower is better) Translates to: VQPPPWCCALLLHWI*CEGFRTGSLYCPVP Trigger: AGGGACTGGGCAGTATAGGGAGCCAGTTCTGAAGCCTTCACAGCAGATCCAGTGGAGCAGGAGAGCACAGCACCAAGGAGGCGGTTGAAC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000136090.8 |
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| 3UTR CCA 90 bp | GCTCCAGTTCAACCGCCTCCTTGGTGCTGTGCTCTCCTGCTCCACTaGATCTGCTGTGAAGGCTTCAGAACTGGCTCCCTATACTGCCCA | + |
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Preference number: 1 (lower is better) Translates to: APVQPPPWCCALLLH*ICCEGFRTGSLYCP Trigger: TGGGCAGTATAGGGAGCCAGTTCTGAAGCCTTCACAGCAGATCCAGTGGAGCAGGAGAGCACAGCACCAAGGAGGCGGTTGAACTGGAGC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000136090.8 |
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| 3UTR CCA 90 bp | ATGGCTGTCACTGAACGCAAGGCTGCTCCAGTTCAACCGCCTCCTTaGTGCTGTGCTCTCCTGCTCCACTGGATCTGCTGTGAAGGCTTC | + |
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Preference number: 1 (lower is better) Translates to: MAVTERKAAPVQPPP*CCALLLHWICCEGF Trigger: GAAGCCTTCACAGCAGATCCAGTGGAGCAGGAGAGCACAGCACCAAGGAGGCGGTTGAACTGGAGCAGCCTTGCGTTCAGTGACAGCCAT 58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000136090.8 |
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| 3UTR TCA 90 bp | GGGTTCCTGGCTCTGGCCAGAGGAATGTCCCAAGTCACTTGGTGCTaGTCCTGGTCTGCTCTGTGGCTGGCTACTCATAGGAGCAGTTCT | + |
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Preference number: 1 (lower is better) Translates to: GFLALARGMSQVTWC*SWSALWLATHRSSS Trigger: AGAACTGCTCCTATGAGTAGCCAGCCACAGAGCAGACCAGGATCAGCACCAAGTGACTTGGGACATTCCTCTGGCCAGAGCCAGGAACCC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000136090.8 |
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| 3UTR CCA 90 bp | TTGCAGCACATCTGTAATCCCAGCCCTCCTACGGCAGCAGCAAGATaGGAGGTGGAACAGACCCCTCCAGATTCTGTCTCAAACAAGGCT | + |
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Preference number: 1 (lower is better) Translates to: LQHICNPSPPTAAAR*EVEQTPPDSVSNKA Trigger: AGCCTTGTTTGAGACAGAATCTGGAGGGGTCTGTTCCACCTCCCATCTTGCTGCTGCCGTAGGAGGGCTGGGATTACAGATGTGCTGCAA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000136090.8 |
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| 3UTR CCA 90 bp | GCCGGGATCGGCCCAAAGAGTCCACGTAATCCACCCATTCCTCACTaGGGTCTTGAGGAGGAGGTATGTCTTTGTCAGAAAACTCTTCTT | + |
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Preference number: 1 (lower is better) Translates to: AGIGPKSPRNPPIPH*GLEEEVCLCQKTLL Trigger: AAGAAGAGTTTTCTGACAAAGACATACCTCCTCCTCAAGACCCCAGTGAGGAATGGGTGGATTACGTGGACTCTTTGGGCCGATCCCGGC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000136090.8 |
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| 3UTR GCA 90 bp | CCCTCTAGAAATTTCCTGAATGCATACTTGGCTCTCCCTGCCTCCTaGCAATGGTGTGTGCACTGGCCCAGAAAGTCTCTTATACTGTTG | + |
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Preference number: 1 (lower is better) Translates to: PSRNFLNAYLALPAS*QWCVHWPRKSLILL Trigger: CAACAGTATAAGAGACTTTCTGGGCCAGTGCACACACCATTGGCAGGAGGCAGGGAGAGCCAAGTATGCATTCAGGAAATTTCTAGAGGG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000136090.8 |
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| 3UTR GCA 90 bp | AGAACATCAGTTCTCCTACAGCTGAAGTTACAGGCAGTTGTGAGTTaGTCAAGAGGGGTGCTGGGAGTCAAACTCTGGTCCTCTGTAAGC | + |
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Preference number: 1 (lower is better) Translates to: RTSVLLQLKLQAVVS*SRGVLGVKLWSSVS Trigger: GCTTACAGAGGACCAGAGTTTGACTCCCAGCACCCCTCTTGAGCAACTCACAACTGCCTGTAACTTCAGCTGTAGGAGAACTGATGTTCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000136090.8 |
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| 3UTR GCA 90 bp | ATGAGCTCTCACTCCTCCCTGTCAACTAATGTGGCCTCAAGCCTGTaGTCCCTGGGAAAGTACAGGAAGAAAGAAGTAAAACTCAGTCCT | + |
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Preference number: 1 (lower is better) Translates to: MSSHSSLSTNVASSL*SLGKYRKKEVKLSP Trigger: AGGACTGAGTTTTACTTCTTTCTTCCTGTACTTTCCCAGGGAGCACAGGCTTGAGGCCACATTAGTTGACAGGGAGGAGTGAGAGCTCAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000037783.7 ENSMUST00000136090.8 |
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| 3UTR CCA 90 bp | AGAAATTTCCTGAATGCATACTTGGCTCTCCCTGCCTCCTGCCAATaGTGTGTGCACTGGCCCAGAAAGTCTCTTATACTGTTGTGCAAC | + |
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Preference number: 1 (lower is better) Translates to: RNFLNAYLALPASCQ*CVHWPRKSLILLCN Trigger: GTTGCACAACAGTATAAGAGACTTTCTGGGCCAGTGCACACACCATTGGCAGGAGGCAGGGAGAGCCAAGTATGCATTCAGGAAATTTCT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000136090.8 |
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| 3UTR TCA 90 bp | CTCCAAAAAGCCGTGAGGCTCCTGCTGTGTTATCAACATGCTGAGTaGGCAGTAAGCCCACGTGAGACAACACACCTATTCAATTTTGAG | + |
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Preference number: 1 (lower is better) Translates to: LQKAVRLLLCYQHAE*AVSPRETTHLFNFE Trigger: CTCAAAATTGAATAGGTGTGTTGTCTCACGTGGGCTTACTGCTCACTCAGCATGTTGATAACACAGCAGGAGCCTCACGGCTTTTTGGAG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000136090.8 |
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| 3UTR GCA 90 bp | GAAGATTTTTATCCATCTCCAATAGACTTGGTAAATCCTTTCTCATaGAGCGCCGGGATCGGCCCAAAGAGTCCACGTAATCCACCCATT | + |
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Preference number: 1 (lower is better) Translates to: EDFYPSPIDLVNPFS*SAGIGPKSPRNPPI Trigger: AATGGGTGGATTACGTGGACTCTTTGGGCCGATCCCGGCGCTGCATGAGAAAGGATTTACCAAGTCTATTGGAGATGGATAAAAATCTTC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000136090.8 |
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| 3UTR CCA 90 bp | TCAGAAAACTCTTCTTTATCATCATCATCTCTCTCTTCCTCGATTTaGGACTCTCTCGTGGCACCAAGCACCTCCATTTCTTTTCGCTTG | + |
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Preference number: 1 (lower is better) Translates to: SENSSLSSSSLSSSI*DSLVAPSTSISFRL Trigger: CAAGCGAAAAGAAATGGAGGTGCTTGGTGCCACGAGAGAGTCCCAAATCGAGGAAGAGAGAGATGATGATGATAAAGAAGAGTTTTCTGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000136090.8 |
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| 3UTR TCA 90 bp | GTGTGTGCACTGGCCCAGAAAGTCTCTTATACTGTTGTGCAACTATaGATACTGATTTCTATTTCAGGGGGATATGACAAAAGGGAATTG | + |
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Preference number: 1 (lower is better) Translates to: VCALAQKVSYTVVQL*ILISISGGYDKREL Trigger: CAATTCCCTTTTGTCATATCCCCCTGAAATAGAAATCAGTATTCATAGTTGCACAACAGTATAAGAGACTTTCTGGGCCAGTGCACACAC 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000136090.8 |
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| 3UTR TCA 90 bp | ACACACACATGTCCTCTGTTCTCACAAGTAGACATTGTTTTCAGGTaGGACTTGAAGTCAGGCTCTTCAGGATGGATTCAACATAGTTTT | + |
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Preference number: 1 (lower is better) Translates to: THTCPLFSQVDIVFR*DLKSGSSGWIQHSF Trigger: AAAACTATGTTGAATCCATCCTGAAGAGCCTGACTTCAAGTCTCACCTGAAAACAATGTCTACTTGTGAGAACAGAGGACATGTGTGTGT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000136090.8 |
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| 3UTR CCA 90 bp | CAACTACTAACAGACTATGCCATGAAGTCGAAATTACTTAGGGTATaGGACAATGTTAGCATAATAAAGGAAAAAGACAAGTTAAGGGGA | + |
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Preference number: 1 (lower is better) Translates to: QLLTDYAMKSKLLRV*DNVSIIKEKDKLRG Trigger: TCCCCTTAACTTGTCTTTTTCCTTTATTATGCTAACATTGTCCCATACCCTAAGTAATTTCGACTTCATGGCATAGTCTGTTAGTAGTTG 37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000136090.8 |
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| 3UTR CAA 90 bp | CCACCTTGCTGTTCTGGGCCACAGGAGCTGGGGCAGGTACAGGCTTaGGCTCTGAGGGCTCAGGAACAACTCCATCTGCTTCTCTGCCTT | + |
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Preference number: 2 (lower is better) Translates to: PPCCSGPQELGQVQA*ALRAQEQLHLLLCL Trigger: AAGGCAGAGAAGCAGATGGAGTTGTTCCTGAGCCCTCAGAGCCAAAGCCTGTACCTGCCCCAGCTCCTGTGGCCCAGAACAGCAAGGTGG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000136090.8 |
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| 3UTR-3UTR GCA 90 bp | ATCCAAAGGAAAAGTCTTTCCCTCGGTCCCACTCTCGGATGTGTGGCACCCCAGCAACCGCCTCCTTGGTaGTGTGCTCTCCTGCTCCAC | + |
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Preference number: 2 (lower is better) Translates to: IQRKSLSLGPTLGCVAPQQPPPW*CALLLH Trigger: GTGGAGCAGGAGAGCACAGCACCAAGGAGGCGGTTG...CTGGGGTGCCACACATCCGAGAGTGGGACCGAGGGAAAGACTTTTCCTTTGGAT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000136090.8 |
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| 3UTR-3UTR GCA 90 bp | GTGAGTTGCTCAAGAGGGGTGCTGGGAGTCAAACTCTGGTCCTCTGTAAGCACAGTGGCCTCAAGCCTGTaGTCCCTGGGAAAGTACAGG | + |
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Preference number: 2 (lower is better) Translates to: VSCSRGVLGVKLWSSVSTVASSL*SLGKYR Trigger: CCTGTACTTTCCCAGGGAGCACAGGCTTGAGGCCAC...TGTGCTTACAGAGGACCAGAGTTTGACTCCCAGCACCCCTCTTGAGCAACTCAC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000136090.8 |
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| 3UTR-3UTR GCA 90 bp | ACCCCAAATGAGTCACAGCTGGGTCAGCATGGAGAGAAGATAGTCCCCCTATACGTGGCCTCAAGCCTGTaGTCCCTGGGAAAGTACAGG | + |
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Preference number: 2 (lower is better) Translates to: TPNESQLGQHGEKIVPLYVASSL*SLGKYR Trigger: CCTGTACTTTCCCAGGGAGCACAGGCTTGAGGCCAC...GTATAGGGGGACTATCTTCTCTCCATGCTGACCCAGCTGTGACTCATTTGGGGT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000037783.7 ENSMUST00000136090.8 |
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| 3UTR-3UTR CCA 90 bp | AACTCTTTGTCTCGGGCAAAGGCAAAATACCCAACACCAAGTTGTCGGGCCTCAGGGGAGAGGAGTGCATaGGGGTTCAGGCACTCTCAG | + |
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Preference number: 2 (lower is better) Translates to: NSLSRAKAKYPTPSCRASGERSA*GFRHSQ Trigger: CTGAGAGTGCCTGAACCCCCATGCACTCCTCTCCCC...TGAGGCCCGACAACTTGGTGTTGGGTATTTTGCCTTTGCCCGAGACAAAGAGTT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000136090.8 |
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| 3UTR-3UTR CCA 90 bp | GATCTCGCTCAGCTCGGAGTTCTGACTGCTTCTTCGACCAGAATCCAAAGGAAAGCTCAAGAGGGGTGCTaGGAGTCAAACTCTGGTCCT | + |
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Preference number: 2 (lower is better) Translates to: DLAQLGVLTASSTRIQRKAQEGC*ESNSGP Trigger: AGGACCAGAGTTTGACTCCCAGCACCCCTCTTGAGC...TTTCCTTTGGATTCTGGTCGAAGAAGCAGTCAGAACTCCGAGCTGAGCGAGATC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000136090.8 |
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| 3UTR-3UTR TCA 90 bp | GATCTCGCTCAGCTCGGAGTTCTGACTGCTTCTTCGACCAGAATCCAAAGGAAATCTAAGGACAGAGACTaGGCAAGGACACTGGGTTCC | + |
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Preference number: 2 (lower is better) Translates to: DLAQLGVLTASSTRIQRKSKDRD*ARTLGS Trigger: GGAACCCAGTGTCCTTGCTCAGTCTCTGTCCTTAGA...TTTCCTTTGGATTCTGGTCGAAGAAGCAGTCAGAACTCCGAGCTGAGCGAGATC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000136090.8 |
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| 3UTR-3UTR TCA 90 bp | CCAAATGAGTCACAGCTGGGTCAGCATGGAGAGAAGATAGTCCCCCTATACCAACAACCTAAGAGTCAATaGGCTCTCACTCCTCCCTGT | + |
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Preference number: 2 (lower is better) Translates to: PNESQLGQHGEKIVPLYQQPKSQ*ALTPPC Trigger: ACAGGGAGGAGTGAGAGCTCATTGACTCTTAGGTTG...TTGGTATAGGGGGACTATCTTCTCTCCATGCTGACCCAGCTGTGACTCATTTGG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000037783.7 ENSMUST00000136090.8 |
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| 3UTR-3UTR TCA 90 bp | GCTGGGTCAGCATGGAGAGAAGATAGTCCCCCTATACCAAGCGGTAAGAAAATGCAACCTAAGAGTCAATaGGCTCTCACTCCTCCCTGT | + |
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Preference number: 2 (lower is better) Translates to: AGSAWREDSPPIPSGKKMQPKSQ*ALTPPC Trigger: ACAGGGAGGAGTGAGAGCTCATTGACTCTTAGGTTG...CATTTTCTTACCGCTTGGTATAGGGGGACTATCTTCTCTCCATGCTGACCCAGC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000037783.7 ENSMUST00000136090.8 |
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| 3UTR-3UTR CCA 90 bp | GATCTCGCTCAGCTCGGAGTTCTGACTGCTTCTTCGACCAGAATCCAAAGGAAACTGGGAGTCAAACTCTaGTCCTCTGTAAGCACAGCA | + |
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Preference number: 2 (lower is better) Translates to: DLAQLGVLTASSTRIQRKLGVKL*SSVSTA Trigger: TGCTGTGCTTACAGAGGACCAGAGTTTGACTCCCAG...TTTCCTTTGGATTCTGGTCGAAGAAGCAGTCAGAACTCCGAGCTGAGCGAGATC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000136090.8 |
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| 3UTR-3UTR CCA 90 bp | GATCTCGCTCAGCTCGGAGTTCTGACTGCTTCTTCGACCAGAATCCAAAGGAAAACTGAGCAAGGACACTaGGTTCCCTATCACCAAGTG | + |
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Preference number: 2 (lower is better) Translates to: DLAQLGVLTASSTRIQRKTEQGH*VPYHQV Trigger: CACTTGGTGATAGGGAACCCAGTGTCCTTGCTCAGT...TTTCCTTTGGATTCTGGTCGAAGAAGCAGTCAGAACTCCGAGCTGAGCGAGATC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000136090.8 |
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| 3UTR-3UTR TCA 90 bp | GTGAGTTGCTCAAGAGGGGTGCTGGGAGTCAAACTCTGGTCCTCTGTAAGCACAAGTAAAACTCAGTCCTaGCTGACTTCTATGAGACAA | + |
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Preference number: 2 (lower is better) Translates to: VSCSRGVLGVKLWSSVSTSKTQS*LTSMRQ Trigger: TTGTCTCATAGAAGTCAGTCAGGACTGAGTTTTACT...TGTGCTTACAGAGGACCAGAGTTTGACTCCCAGCACCCCTCTTGAGCAACTCAC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000136090.8 |
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| 3UTR-3UTR TCA 90 bp | ATCCAAAGGAAAAGTCTTTCCCTCGGTCCCACTCTCGGATGTGTGGCACCCCAGTGCAACTATGAATACTaGTTTCTATTTCAGGGGGAT | + |
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Preference number: 2 (lower is better) Translates to: IQRKSLSLGPTLGCVAPQCNYEY*FLFQGD Trigger: ATCCCCCTGAAATAGAAATCAGTATTCATAGTTGCA...CTGGGGTGCCACACATCCGAGAGTGGGACCGAGGGAAAGACTTTTCCTTTGGAT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000136090.8 |
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| 3UTR-3UTR TCA 90 bp | CCAAATGAGTCACAGCTGGGTCAGCATGGAGAGAAGATAGTCCCCCTATACCAAAGTAAAACTCAGTCCTaGCTGACTTCTATGAGACAA | + |
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Preference number: 2 (lower is better) Translates to: PNESQLGQHGEKIVPLYQSKTQS*LTSMRQ Trigger: TTGTCTCATAGAAGTCAGTCAGGACTGAGTTTTACT...TTGGTATAGGGGGACTATCTTCTCTCCATGCTGACCCAGCTGTGACTCATTTGG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000037783.7 ENSMUST00000136090.8 |
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| 3UTR-3UTR GCA 90 bp | GTGAGTTGCTCAAGAGGGGTGCTGGGAGTCAAACTCTGGTCCTCTGTAAGCACAACTACTAACAGACTATaGCATGAAGTCGAAATTACT | + |
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Preference number: 2 (lower is better) Translates to: VSCSRGVLGVKLWSSVSTTTNRL*HEVEIT Trigger: AGTAATTTCGACTTCATGGCATAGTCTGTTAGTAGT...TGTGCTTACAGAGGACCAGAGTTTGACTCCCAGCACCCCTCTTGAGCAACTCAC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000136090.8 |
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| 3UTR CAA 90 bp | GTCAGAAAACTCTTCTTTATCATCATCATCTCTCTCTTCCTCGATTaGGGACTCTCTCGTGGCACCAAGCACCTCCATTTCTTTTCGCTT | + |
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Preference number: 2 (lower is better) Translates to: VRKLFFIIIISLFLD*GLSRGTKHLHFFSL Trigger: AAGCGAAAAGAAATGGAGGTGCTTGGTGCCACGAGAGAGTCCCAAATCGAGGAAGAGAGAGATGATGATGATAAAGAAGAGTTTTCTGAC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000136090.8 |
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| 3UTR-3UTR TCA 90 bp | AACTCTTTGTCTCGGGCAAAGGCAAAATACCCAACACCAAGTTGTCGGGCCTCAGCCTTTCTAAACATATaGGTTGCATCATTTAGCTCT | + |
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Preference number: 2 (lower is better) Translates to: NSLSRAKAKYPTPSCRASAFLNI*VASFSS Trigger: AGAGCTAAATGATGCAACTCATATGTTTAGAAAGGC...TGAGGCCCGACAACTTGGTGTTGGGTATTTTGCCTTTGCCCGAGACAAAGAGTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000136090.8 |
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| 3UTR TCA 72 bp | GGCCACAGGAGCTGGGGCAGGTACAGGCTTTGGCTCTaGGGGCTCAGGAACAACTCCATCTGCTTCTCTGCC | + |
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Preference number: 3 (lower is better) Translates to: GHRSWGRYRLWL*GLRNNSICFSA Trigger: GGCAGAGAAGCAGATGGAGTTGTTCCTGAGCCCTCAGAGCCAAAGCCTGTACCTGCCCCAGCTCCTGTGGCC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000136090.8 |
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| 3UTR CCA 72 bp | CTGTGGGCGCTTGTGGTGAGCTTTCAGAGGCAGGAGTaGATGTGTGTGAAGAGCTGGGTTCCTGGCTCTGGC | + |
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Preference number: 3 (lower is better) Translates to: LWALVVSFQRQE*MCVKSWVPGSG Trigger: GCCAGAGCCAGGAACCCAGCTCTTCACACACATCCACTCCTGCCTCTGAAAGCTCACCACAAGCGCCCACAG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000136090.8 |
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| 3UTR CCA 72 bp | CAACCGCCTCCTTGGTGCTGTGCTCTCCTGCTCCACTaGATCTGCTGTGAAGGCTTCAGAACTGGCTCCCTA | + |
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Preference number: 3 (lower is better) Translates to: QPPPWCCALLLH*ICCEGFRTGSL Trigger: TAGGGAGCCAGTTCTGAAGCCTTCACAGCAGATCCAGTGGAGCAGGAGAGCACAGCACCAAGGAGGCGGTTG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000136090.8 |
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| 3UTR CCA 72 bp | ATCCCAGCCCTCCTACGGCAGCAGCAAGATGGGAGGTaGAACAGACCCCTCCAGATTCTGTCTCAAACAAGG | + |
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Preference number: 3 (lower is better) Translates to: IPALLRQQQDGR*NRPLQILSQTR Trigger: CCTTGTTTGAGACAGAATCTGGAGGGGTCTGTTCCACCTCCCATCTTGCTGCTGCCGTAGGAGGGCTGGGAT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000136090.8 |
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| 3UTR CCA 72 bp | ATCTGTAATCCCAGCCCTCCTACGGCAGCAGCAAGATaGGAGGTGGAACAGACCCCTCCAGATTCTGTCTCA | + |
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Preference number: 3 (lower is better) Translates to: ICNPSPPTAAAR*EVEQTPPDSVS Trigger: TGAGACAGAATCTGGAGGGGTCTGTTCCACCTCCCATCTTGCTGCTGCCGTAGGAGGGCTGGGATTACAGAT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000136090.8 |
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| 3UTR CCA 72 bp | GGAGTGGATGTGTGTGAAGAGCTGGGTTCCTGGCTCTaGCCAGAGGAATGTCCCAAGTCACTTGGTGCTGAT | + |
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Preference number: 3 (lower is better) Translates to: GVDVCEELGSWL*PEECPKSLGAD Trigger: ATCAGCACCAAGTGACTTGGGACATTCCTCTGGCCAGAGCCAGGAACCCAGCTCTTCACACACATCCACTCC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000136090.8 |
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| 3UTR-3UTR CAA 90 bp | ATCCAAAGGAAAAGTCTTTCCCTCGGTCCCACTCTCGGATGTGTGGCACCCCAGACAGCCACTGCAGTCTaGTGTGCTAGACACGGTAGA | + |
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Preference number: 3 (lower is better) Translates to: IQRKSLSLGPTLGCVAPQTATAV*CARHGR Trigger: TCTACCGTGTCTAGCACACAAGACTGCAGTGGCTGT...CTGGGGTGCCACACATCCGAGAGTGGGACCGAGGGAAAGACTTTTCCTTTGGAT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000136090.8 |
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| 3UTR TCA 72 bp | AGGCTTCAGAACTGGCTCCCTATACTGCCCAGTCCCTaGTGGCTCCTAACAAACTGCCTGGTACCCAACAGA | + |
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Preference number: 3 (lower is better) Translates to: RLQNWLPILPSP*WLLTNCLVPNR Trigger: TCTGTTGGGTACCAGGCAGTTTGTTAGGAGCCATCAGGGACTGGGCAGTATAGGGAGCCAGTTCTGAAGCCT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000136090.8 |
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| 3UTR TCA 72 bp | GCCGTGAGGCTCCTGCTGTGTTATCAACATGCTGAGTaGGCAGTAAGCCCACGTGAGACAACACACCTATTC | + |
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Preference number: 3 (lower is better) Translates to: AVRLLLCYQHAE*AVSPRETTHLF Trigger: GAATAGGTGTGTTGTCTCACGTGGGCTTACTGCTCACTCAGCATGTTGATAACACAGCAGGAGCCTCACGGC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000136090.8 |
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| 3UTR GCA 72 bp | CATACTTGGCTCTCCCTGCCTCCTGCCAATGGTGTGTaGACTGGCCCAGAAAGTCTCTTATACTGTTGTGCA | + |
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Preference number: 3 (lower is better) Translates to: HTWLSLPPANGV*TGPESLLYCCA Trigger: TGCACAACAGTATAAGAGACTTTCTGGGCCAGTGCACACACCATTGGCAGGAGGCAGGGAGAGCCAAGTATG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000136090.8 |
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| 3UTR GCA 72 bp | GTTCTCCTACAGCTGAAGTTACAGGCAGTTGTGAGTTaGTCAAGAGGGGTGCTGGGAGTCAAACTCTGGTCC | + |
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Preference number: 3 (lower is better) Translates to: VLLQLKLQAVVS*SRGVLGVKLWS Trigger: GGACCAGAGTTTGACTCCCAGCACCCCTCTTGAGCAACTCACAACTGCCTGTAACTTCAGCTGTAGGAGAAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000136090.8 |
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| 3UTR CCA 72 bp | CTGAATGCATACTTGGCTCTCCCTGCCTCCTGCCAATaGTGTGTGCACTGGCCCAGAAAGTCTCTTATACTG | + |
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Preference number: 3 (lower is better) Translates to: LNAYLALPASCQ*CVHWPRKSLIL Trigger: CAGTATAAGAGACTTTCTGGGCCAGTGCACACACCATTGGCAGGAGGCAGGGAGAGCCAAGTATGCATTCAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000136090.8 |
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| 3UTR-3UTR CAA 90 bp | ATCCAAAGGAAAAGTCTTTCCCTCGGTCCCACTCTCGGATGTGTGGCACCCCAGGGTGGAAAGAAGTGCTaGAAAGGTCCTAACACAGGT | + |
|
Preference number: 3 (lower is better) Translates to: IQRKSLSLGPTLGCVAPQGGKKC*KGPNTG Trigger: ACCTGTGTTAGGACCTTTCAAGCACTTCTTTCCACC...CTGGGGTGCCACACATCCGAGAGTGGGACCGAGGGAAAGACTTTTCCTTTGGAT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000136090.8 |
||
| 3UTR-3UTR CAA 90 bp | GATCTCGCTCAGCTCGGAGTTCTGACTGCTTCTTCGACCAGAATCCAAAGGAAAATGATGACCTCCACCTaGCTGTTCTGGGCCACAGGA | + |
|
Preference number: 3 (lower is better) Translates to: DLAQLGVLTASSTRIQRKMMTST*LFWATG Trigger: TCCTGTGGCCCAGAACAGCAAGGTGGAGGTCATCAT...TTTCCTTTGGATTCTGGTCGAAGAAGCAGTCAGAACTCCGAGCTGAGCGAGATC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000136090.8 |
||
| 3UTR-3UTR CAA 90 bp | GTGAGTTGCTCAAGAGGGGTGCTGGGAGTCAAACTCTGGTCCTCTGTAAGCACATCAAAGGGAAAGCACTaGCTGCCCAATCATGAAGAC | + |
|
Preference number: 3 (lower is better) Translates to: VSCSRGVLGVKLWSSVSTSKGKH*LPNHED Trigger: GTCTTCATGATTGGGCAGCAAGTGCTTTCCCTTTGA...TGTGCTTACAGAGGACCAGAGTTTGACTCCCAGCACCCCTCTTGAGCAACTCAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000136090.8 |
||
| 3UTR TCA 72 bp | AAAACCATAGCTGGAACTGAGAAGGGCCCCATTGTCTaGCTGTTTGCCAGTCAATGCCTGCACCTGGGACAA | + |
|
Preference number: 3 (lower is better) Translates to: KTIAGTEKGPIV*LFASQCLHLGQ Trigger: TTGTCCCAGGTGCAGGCATTGACTGGCAAACAGTCAGACAATGGGGCCCTTCTCAGTTCCAGCTATGGTTTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000136090.8 |
||
| 3UTR GCA 72 bp | GGGACCACAATTCTGCACAACCTTACTTTTCCCACATaGATGGCTGTCACTGAACGCAAGGCTGCTCCAGTT | + |
|
Preference number: 3 (lower is better) Translates to: GTTILHNLTFPT*MAVTERKAAPV Trigger: AACTGGAGCAGCCTTGCGTTCAGTGACAGCCATGCATGTGGGAAAAGTAAGGTTGTGCAGAATTGTGGTCCC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000136090.8 |
||
| 3UTR GCA 72 bp | AATTTCCTGAATGCATACTTGGCTCTCCCTGCCTCCTaGCAATGGTGTGTGCACTGGCCCAGAAAGTCTCTT | + |
|
Preference number: 3 (lower is better) Translates to: NFLNAYLALPAS*QWCVHWPRKSL Trigger: AAGAGACTTTCTGGGCCAGTGCACACACCATTGGCAGGAGGCAGGGAGAGCCAAGTATGCATTCAGGAAATT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000136090.8 |
||
| 3UTR CCA 72 bp | TTGGCTCTCCCTGCCTCCTGCCAATGGTGTGTGCACTaGCCCAGAAAGTCTCTTATACTGTTGTGCAACTAT | + |
|
Preference number: 3 (lower is better) Translates to: LALPASCQWCVH*PRKSLILLCNY Trigger: ATAGTTGCACAACAGTATAAGAGACTTTCTGGGCCAGTGCACACACCATTGGCAGGAGGCAGGGAGAGCCAA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000136090.8 |
||
| 3UTR CCA 72 bp | GGCCCAAAGAGTCCACGTAATCCACCCATTCCTCACTaGGGTCTTGAGGAGGAGGTATGTCTTTGTCAGAAA | + |
|
Preference number: 3 (lower is better) Translates to: GPKSPRNPPIPH*GLEEEVCLCQK Trigger: TTTCTGACAAAGACATACCTCCTCCTCAAGACCCCAGTGAGGAATGGGTGGATTACGTGGACTCTTTGGGCC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000136090.8 |
||
| 3UTR TCA 72 bp | AGACTGAGCAAGGACACTGGGTTCCCTATCACCAAGTaGTGTCACCCCCTTTACAGTGTAACAGTGGAGACA | + |
|
Preference number: 3 (lower is better) Translates to: RLSKDTGFPITK*CHPLYSVTVET Trigger: TGTCTCCACTGTTACACTGTAAAGGGGGTGACATCACTTGGTGATAGGGAACCCAGTGTCCTTGCTCAGTCT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000136090.8 |
||
| 3UTR CCA 72 bp | CCACAATTCTGCACAACCTTACTTTTCCCACATGCATaGCTGTCACTGAACGCAAGGCTGCTCCAGTTCAAC | + |
|
Preference number: 3 (lower is better) Translates to: PQFCTTLLFPHA*LSLNARLLQFN Trigger: GTTGAACTGGAGCAGCCTTGCGTTCAGTGACAGCCATGCATGTGGGAAAAGTAAGGTTGTGCAGAATTGTGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000136090.8 |
||
| 3UTR-3UTR CAA 90 bp | ACGGTAGTGAGACATCCTAGAGATGAGCACCTTGCTCCTCTTCTGGAGGGCAGCTACCATATTACAGCATaGCCCTCTAGAAATTTCCTG | + |
|
Preference number: 3 (lower is better) Translates to: TVVRHPRDEHLAPLLEGSYHITA*PSRNFL Trigger: CAGGAAATTTCTAGAGGGCAATGCTGTAATATGGTA...GCTGCCCTCCAGAAGAGGAGCAAGGTGCTCATCTCTAGGATGTCTCACTACCGT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000136090.8 |
||
| 3UTR GCA 72 bp | TATCCATCTCCAATAGACTTGGTAAATCCTTTCTCATaGAGCGCCGGGATCGGCCCAAAGAGTCCACGTAAT | + |
|
Preference number: 3 (lower is better) Translates to: YPSPIDLVNPFS*SAGIGPKSPRN Trigger: ATTACGTGGACTCTTTGGGCCGATCCCGGCGCTGCATGAGAAAGGATTTACCAAGTCTATTGGAGATGGATA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000136090.8 |
||
| 3UTR CCA 72 bp | CATCATCTCTCTCTTCCTCGATTTGGGACTCTCTCGTaGCACCAAGCACCTCCATTTCTTTTCGCTTGTCTA | + |
|
Preference number: 3 (lower is better) Translates to: HHLSLPRFGTLS*HQAPPFLFACL Trigger: TAGACAAGCGAAAAGAAATGGAGGTGCTTGGTGCCACGAGAGAGTCCCAAATCGAGGAAGAGAGAGATGATG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000136090.8 |
||
| 3UTR-3UTR CAA 90 bp | GATCTCGCTCAGCTCGGAGTTCTGACTGCTTCTTCGACCAGAATCCAAAGGAAAGAAGTGGTATGTTCTTaGAGAGCTGAAGTGCAGATG | + |
|
Preference number: 3 (lower is better) Translates to: DLAQLGVLTASSTRIQRKEVVCS*RAEVQM Trigger: CATCTGCACTTCAGCTCTCAAAGAACATACCACTTC...TTTCCTTTGGATTCTGGTCGAAGAAGCAGTCAGAACTCCGAGCTGAGCGAGATC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000136090.8 |
||
| 3UTR-3UTR CAA 90 bp | TCTCCAATAGACTTGGTAAATCCTTTCTCATGCAGCGCCGGGATCGGCCCAAAGTTGAGCAAATCACAGTaGACAACATACAAGAGACAC | + |
|
Preference number: 3 (lower is better) Translates to: SPIDLVNPFSCSAGIGPKLSKSQ*TTYKRH Trigger: GTGTCTCTTGTATGTTGTCAACTGTGATTTGCTCAA...CTTTGGGCCGATCCCGGCGCTGCATGAGAAAGGATTTACCAAGTCTATTGGAGA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000136090.8 |
||
| 3UTR-3UTR CAA 90 bp | AACTCTTTGTCTCGGGCAAAGGCAAAATACCCAACACCAAGTTGTCGGGCCTCACCATCTCCAATAGACTaGGTAAATCCTTTCTCATGC | + |
|
Preference number: 3 (lower is better) Translates to: NSLSRAKAKYPTPSCRASPSPID*VNPFSC Trigger: GCATGAGAAAGGATTTACCAAGTCTATTGGAGATGG...TGAGGCCCGACAACTTGGTGTTGGGTATTTTGCCTTTGCCCGAGACAAAGAGTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000136090.8 |
||
| 3UTR TCA 72 bp | AGTGTAGAAAATCCATGCTATCTGAGAAGAGGCAAATaGTGGCCCACAGCCACTGCAGTCTTGTGTGCTAGA | + |
|
Preference number: 3 (lower is better) Translates to: SVENPCYLRRGK*WPTATAVLCAR Trigger: TCTAGCACACAAGACTGCAGTGGCTGTGGGCCATCATTTGCCTCTTCTCAGATAGCATGGATTTTCTACACT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000136090.8 |
||
| 3UTR TCA 72 bp | ACCTGGGACAATTTGCAGACACAGCCACCAAGCACTTaGCAGGAAGCTCTAAATAAGCCATCCATAACACCA | + |
|
Preference number: 3 (lower is better) Translates to: TWDNLQTQPPST*QEALNKPSITP Trigger: TGGTGTTATGGATGGCTTATTTAGAGCTTCCTGTCAAGTGCTTGGTGGCTGTGTCTGCAAATTGTCCCAGGT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000136090.8 |
||
| 3UTR CCA 72 bp | AAGGTCCTAACACAGGTAAACAACGTGCTCTTAAGCTaGGGCATAGTGTGCACACCTTTAATCACAGCACTT | + |
|
Preference number: 3 (lower is better) Translates to: KVLTQVNNVLLS*GIVCTPLITAL Trigger: AAGTGCTGTGATTAAAGGTGTGCACACTATGCCCCAGCTTAAGAGCACGTTGTTTACCTGTGTTAGGACCTT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000136090.8 |
||
| 3UTR CCA 72 bp | TCTTCTTTATCATCATCATCTCTCTCTTCCTCGATTTaGGACTCTCTCGTGGCACCAAGCACCTCCATTTCT | + |
|
Preference number: 3 (lower is better) Translates to: SSLSSSSLSSSI*DSLVAPSTSIS Trigger: AGAAATGGAGGTGCTTGGTGCCACGAGAGAGTCCCAAATCGAGGAAGAGAGAGATGATGATGATAAAGAAGA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000136090.8 |
||
| 3UTR GCA 72 bp | GTTGCATCATTTAGCTCTTGCACTGGTGGAAAGAAGTaGTTGAAAGGTCCTAACACAGGTAAACAACGTGCT | + |
|
Preference number: 3 (lower is better) Translates to: VASFSSCTGGKK*LKGPNTGKQRA Trigger: AGCACGTTGTTTACCTGTGTTAGGACCTTTCAAGCACTTCTTTCCACCAGTGCAAGAGCTAAATGATGCAAC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000136090.8 |
||
| 3UTR TCA 72 bp | TGTCCTCTGTTCTCACAAGTAGACATTGTTTTCAGGTaGGACTTGAAGTCAGGCTCTTCAGGATGGATTCAA | + |
|
Preference number: 3 (lower is better) Translates to: CPLFSQVDIVFR*DLKSGSSGWIQ Trigger: TTGAATCCATCCTGAAGAGCCTGACTTCAAGTCTCACCTGAAAACAATGTCTACTTGTGAGAACAGAGGACA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000136090.8 |
||
| 3UTR TCA 72 bp | ATTAGCATTTATAATTTACACACCTGGAACCCCAAATaGGTCACAGCTGGGTCAGCATGGAGAGAAGATAGT | + |
|
Preference number: 3 (lower is better) Translates to: ISIYNLHTWNPK*VTAGSAWREDS Trigger: ACTATCTTCTCTCCATGCTGACCCAGCTGTGACTCATTTGGGGTTCCAGGTGTGTAAATTATAAATGCTAAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000037783.7 ENSMUST00000136090.8 |
||
| 3UTR TCA 72 bp | TATAATAAGATATCATATCATCTAGTGTTTGGAAAGTaGCTGTGGGCGCTTGTGGTGAGCTTTCAGAGGCAG | + |
|
Preference number: 3 (lower is better) Translates to: YNKISYHLVFGK*LWALVVSFQRQ Trigger: CTGCCTCTGAAAGCTCACCACAAGCGCCCACAGTCACTTTCCAAACACTAGATGATATGATATCTTATTATA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000136090.8 |
||
| 3UTR TCA 72 bp | CTGGCCCAGAAAGTCTCTTATACTGTTGTGCAACTATaGATACTGATTTCTATTTCAGGGGGATATGACAAA | + |
|
Preference number: 3 (lower is better) Translates to: LAQKVSYTVVQL*ILISISGGYDK Trigger: TTTGTCATATCCCCCTGAAATAGAAATCAGTATTCATAGTTGCACAACAGTATAAGAGACTTTCTGGGCCAG 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000136090.8 |
||
| 3UTR CAA 72 bp | TGTTCTGGGCCACAGGAGCTGGGGCAGGTACAGGCTTaGGCTCTGAGGGCTCAGGAACAACTCCATCTGCTT | + |
|
Preference number: 4 (lower is better) Translates to: CSGPQELGQVQA*ALRAQEQLHLL Trigger: AAGCAGATGGAGTTGTTCCTGAGCCCTCAGAGCCAAAGCCTGTACCTGCCCCAGCTCCTGTGGCCCAGAACA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000136090.8 |
||
| CDS-3UTR CCA 90 bp | CAGCTGGGTCAGCATGGAGAGAAGATAGTCCCCCTATACCAAGCGGTAAGAAAACTGGGCCACAGGAGCTaGGGCAGGTACAGGCTTTGG | + |
|
Preference number: 4 (lower is better) Translates to: QLGQHGEKIVPLYQAVRKLGHRS*GRYRLW Trigger: CCAAAGCCTGTACCTGCCCCAGCTCCTGTGGCCCAG...TTTTCTTACCGCTTGGTATAGGGGGACTATCTTCTCTCCATGCTGACCCAGCTG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000037783.7 |
||
| CDS-3UTR CCA 90 bp | CAGCTGGGTCAGCATGGAGAGAAGATAGTCCCCCTATACCAAGCGGTAAGAAAATCCACCTTGCTGTTCTaGGCCACAGGAGCTGGGGCA | + |
|
Preference number: 4 (lower is better) Translates to: QLGQHGEKIVPLYQAVRKSTLLF*ATGAGA Trigger: TGCCCCAGCTCCTGTGGCCCAGAACAGCAAGGTGGA...TTTTCTTACCGCTTGGTATAGGGGGACTATCTTCTCTCCATGCTGACCCAGCTG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000037783.7 |
||
| CDS-3UTR CCA 90 bp | ACCCCAAATGAGTCACAGCTGGGTCAGCATGGAGAGAAGATAGTCCCCCTATACCCACCCATTCCTCACTaGGGTCTTGAGGAGGAGGTA | + |
|
Preference number: 4 (lower is better) Translates to: TPNESQLGQHGEKIVPLYPPIPH*GLEEEV Trigger: TACCTCCTCCTCAAGACCCCAGTGAGGAATGGGTGG...GTATAGGGGGACTATCTTCTCTCCATGCTGACCCAGCTGTGACTCATTTGGGGT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000037783.7 |
||
| 3UTR CAA 72 bp | TTCTGGAGGGCAGCATTCTCACCACAGCTTCCAGCTTaGGGAATGACTGACTTTTCCATGCTGGACTCCCTG | + |
|
Preference number: 4 (lower is better) Translates to: FWRAAFSPQLPA*GMTDFSMLDSL Trigger: CAGGGAGTCCAGCATGGAAAAGTCAGTCATTCCCAAAGCTGGAAGCTGTGGTGAGAATGCTGCCCTCCAGAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000136090.8 |
||
| CDS-3UTR TCA 90 bp | CAGCTGGGTCAGCATGGAGAGAAGATAGTCCCCCTATACCAAGCGGTAAGAAAATACAGGCTTTGGCTCTaGGGGCTCAGGAACAACTCC | + |
|
Preference number: 4 (lower is better) Translates to: QLGQHGEKIVPLYQAVRKYRLWL*GLRNNS Trigger: GGAGTTGTTCCTGAGCCCTCAGAGCCAAAGCCTGTA...TTTTCTTACCGCTTGGTATAGGGGGACTATCTTCTCTCCATGCTGACCCAGCTG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000037783.7 |
||
| CDS-3UTR TCA 90 bp | TCAACTAATGTGGCCTCAAGCCTGTGCTCCCTGGGAAAGTACAGGAAGAAAGAAGTGTCCCTCCTCTCCTaGATGATGACCTCCACCTTG | + |
|
Preference number: 4 (lower is better) Translates to: STNVASSLCSLGKYRKKEVSLLS*MMTSTL Trigger: CAAGGTGGAGGTCATCATTCAGGAGAGGAGGGACAC...TTCTTTCTTCCTGTACTTTCCCAGGGAGCACAGGCTTGAGGCCACATTAGTTGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000037783.7 |
||
| CDS-3UTR GCA 90 bp | TCAACTAATGTGGCCTCAAGCCTGTGCTCCCTGGGAAAGTACAGGAAGAAAGAAGTAAATCCTTTCTCATaGAGCGCCGGGATCGGCCCA | + |
|
Preference number: 4 (lower is better) Translates to: STNVASSLCSLGKYRKKEVNPFS*SAGIGP Trigger: TGGGCCGATCCCGGCGCTGCATGAGAAAGGATTTAC...TTCTTTCTTCCTGTACTTTCCCAGGGAGCACAGGCTTGAGGCCACATTAGTTGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000037783.7 |
||
| CDS-3UTR CCA 90 bp | TCAACTAATGTGGCCTCAAGCCTGTGCTCCCTGGGAAAGTACAGGAAGAAAGAATCCTGGTCTGCTCTGTaGCTGGCTACTCATAGGAGC | + |
|
Preference number: 4 (lower is better) Translates to: STNVASSLCSLGKYRKKESWSAL*LATHRS Trigger: GCTCCTATGAGTAGCCAGCCACAGAGCAGACCAGGA...TTCTTTCTTCCTGTACTTTCCCAGGGAGCACAGGCTTGAGGCCACATTAGTTGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000037783.7 |
||
| 3UTR CAA 72 bp | ACAGCATTGCCCTCTAGAAATTTCCTGAATGCATACTaGGCTCTCCCTGCCTCCTGCCAATGGTGTGTGCAC | + |
|
Preference number: 4 (lower is better) Translates to: TALPSRNFLNAY*ALPASCQWCVH Trigger: GTGCACACACCATTGGCAGGAGGCAGGGAGAGCCAAGTATGCATTCAGGAAATTTCTAGAGGGCAATGCTGT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000136090.8 |
||
| 3UTR CAA 72 bp | TTCCAGGGCTACACAGTGAGAACCTGCCTCTCTCACTaGCACACACACACACACACACATGTCCTCTGTTCT | + |
|
Preference number: 4 (lower is better) Translates to: FQGYTVRTCLSH*HTHTHTHVLCS Trigger: AGAACAGAGGACATGTGTGTGTGTGTGTGTGTGCAAGTGAGAGAGGCAGGTTCTCACTGTGTAGCCCTGGAA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000136090.8 |
||
| CDS-3UTR TCA 90 bp | GGTAAGAAAATGAACAACCTAAGAGTCAATGAGCTCTCACTCCTCCCTGTCAACTGTGGGCGCTTGTGGTaGGCTTTCAGAGGCAGGAGT | + |
|
Preference number: 4 (lower is better) Translates to: GKKMNNLRVNELSLLPVNCGRLW*AFRGRS Trigger: ACTCCTGCCTCTGAAAGCTCACCACAAGCGCCCACA...GTTGACAGGGAGGAGTGAGAGCTCATTGACTCTTAGGTTGTTCATTTTCTTACC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000037783.7 |
||
| CDS-3UTR GCA 90 bp | CAGCTGGGTCAGCATGGAGAGAAGATAGTCCCCCTATACCAAGCGGTAAGAAAAGCTCGGAGTTCTGACTaGTTCTTCGACCAGAATCCA | + |
|
Preference number: 4 (lower is better) Translates to: QLGQHGEKIVPLYQAVRKARSSD*FFDQNP Trigger: TGGATTCTGGTCGAAGAAGCAGTCAGAACTCCGAGC...TTTTCTTACCGCTTGGTATAGGGGGACTATCTTCTCTCCATGCTGACCCAGCTG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000037783.7 |
||
| 3UTR CAA 72 bp | AGAGTCCACGTAATCCACCCATTCCTCACTGGGGTCTaGAGGAGGAGGTATGTCTTTGTCAGAAAACTCTTC | + |
|
Preference number: 4 (lower is better) Translates to: RVHVIHPFLTGV*RRRYVFVRKLF Trigger: GAAGAGTTTTCTGACAAAGACATACCTCCTCCTCAAGACCCCAGTGAGGAATGGGTGGATTACGTGGACTCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000136090.8 |
||
| CDS-3UTR TCA 90 bp | GGAACCCCAAATGAGTCACAGCTGGGTCAGCATGGAGAGAAGATAGTCCCCCTATCTCGTTTTATTCTCTaGTCTGTTGTCTGTTCACGA | + |
|
Preference number: 4 (lower is better) Translates to: GTPNESQLGQHGEKIVPLSRFIL*SVVCSR Trigger: TCGTGAACAGACAACAGATCAGAGAATAAAACGAGA...TAGGGGGACTATCTTCTCTCCATGCTGACCCAGCTGTGACTCATTTGGGGTTCC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000037783.7 |
||
| CDS-3UTR GCA 90 bp | AATGAGTCACAGCTGGGTCAGCATGGAGAGAAGATAGTCCCCCTATACCAAGCGTTGTCTAGAGTCTTCTaGTCCTCAAGCTTTTGTTCC | + |
|
Preference number: 4 (lower is better) Translates to: NESQLGQHGEKIVPLYQALSRVF*SSSFCS Trigger: GGAACAAAAGCTTGAGGAGCAGAAGACTCTAGACAA...CGCTTGGTATAGGGGGACTATCTTCTCTCCATGCTGACCCAGCTGTGACTCATT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000037783.7 ENSMUST00000136090.8 |
||
| CDS-3UTR GCA 90 bp | GCTGGGTCAGCATGGAGAGAAGATAGTCCCCCTATACCAAGCGGTAAGAAAATGAGGAACAACTCCATCTaGTTCTCTGCCTTCTTCTTC | + |
|
Preference number: 4 (lower is better) Translates to: AGSAWREDSPPIPSGKKMRNNSI*FSAFFF Trigger: GAAGAAGAAGGCAGAGAAGCAGATGGAGTTGTTCCT...CATTTTCTTACCGCTTGGTATAGGGGGACTATCTTCTCTCCATGCTGACCCAGC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000037783.7 |
||
| CDS-3UTR CCA 90 bp | ATACCAAGCGGTAAGAAAATGAACAACCTAAGAGTCAATGAGCTCTCACTCCTCATGTGTGTGAAGAGCTaGGTTCCTGGCTCTGGCCAG | + |
|
Preference number: 4 (lower is better) Translates to: IPSGKKMNNLRVNELSLLMCVKS*VPGSGQ Trigger: CTGGCCAGAGCCAGGAACCCAGCTCTTCACACACAT...GAGGAGTGAGAGCTCATTGACTCTTAGGTTGTTCATTTTCTTACCGCTTGGTAT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000037783.7 |
||
| CDS-3UTR GCA 90 bp | ACCCCAAATGAGTCACAGCTGGGTCAGCATGGAGAGAAGATAGTCCCCCTATACTCGACTTGTAACACCTaGATTTTGTTTGCTCCAGAT | + |
|
Preference number: 4 (lower is better) Translates to: TPNESQLGQHGEKIVPLYSTCNT*ILFAPD Trigger: ATCTGGAGCAAACAAAATGCAGGTGTTACAAGTCGA...GTATAGGGGGACTATCTTCTCTCCATGCTGACCCAGCTGTGACTCATTTGGGGT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000037783.7 ENSMUST00000136090.8 |
||
| CDS-3UTR CCA 90 bp | ATACCAAGCGGTAAGAAAATGAACAACCTAAGAGTCAATGAGCTCTCACTCCTCGGTCTGCTCTGTGGCTaGCTACTCATAGGAGCAGTT | + |
|
Preference number: 4 (lower is better) Translates to: IPSGKKMNNLRVNELSLLGLLCG*LLIGAV Trigger: AACTGCTCCTATGAGTAGCCAGCCACAGAGCAGACC...GAGGAGTGAGAGCTCATTGACTCTTAGGTTGTTCATTTTCTTACCGCTTGGTAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000037783.7 |
||
| 3UTR CAA 72 bp | CTCTTCTTTATCATCATCATCTCTCTCTTCCTCGATTaGGGACTCTCTCGTGGCACCAAGCACCTCCATTTC | + |
|
Preference number: 4 (lower is better) Translates to: LFFIIIISLFLD*GLSRGTKHLHF Trigger: GAAATGGAGGTGCTTGGTGCCACGAGAGAGTCCCAAATCGAGGAAGAGAGAGATGATGATGATAAAGAAGAG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000136090.8 |
||
| 3UTR CAA 72 bp | TTTGTCTCGGGCAAAGGCAAAATACCCAACACCAAGTaGTCGGGCCTCATTTTCCCGGATGTCTTCATAATG | + |
|
Preference number: 4 (lower is better) Translates to: FVSGKGKIPNTK*SGLIFPDVFIM Trigger: CATTATGAAGACATCCGGGAAAATGAGGCCCGACAACTTGGTGTTGGGTATTTTGCCTTTGCCCGAGACAAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000136090.8 |
||
| CDS-3UTR GCA 90 bp | GATCTCGCTCAGCTCGGAGTTCTGACTGCTTCTTCGACCAGAATCCAAAGGAAATCGACTTGTAACACCTaGATTTTGTTTGCTCCAGAT | + |
|
Preference number: 4 (lower is better) Translates to: DLAQLGVLTASSTRIQRKSTCNT*ILFAPD Trigger: ATCTGGAGCAAACAAAATGCAGGTGTTACAAGTCGA...TTTCCTTTGGATTCTGGTCGAAGAAGCAGTCAGAACTCCGAGCTGAGCGAGATC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000136090.8 |
||
| CDS-3UTR CCA 90 bp | TCAACTAATGTGGCCTCAAGCCTGTGCTCCCTGGGAAAGTACAGGAAGAAAGAATGTCTTCATAATGGATaGGCCCCATTGGCTTTTTCA | + |
|
Preference number: 4 (lower is better) Translates to: STNVASSLCSLGKYRKKECLHNG*APLAFS Trigger: TGAAAAAGCCAATGGGGCCCATCCATTATGAAGACA...TTCTTTCTTCCTGTACTTTCCCAGGGAGCACAGGCTTGAGGCCACATTAGTTGA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000037783.7 |
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| 3UTR CAA 72 bp | TCTCTCGTGGCACCAAGCACCTCCATTTCTTTTCGCTaGTCTATGATCTTCTGTGTGAAATCCACAAGGTAC | + |
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Preference number: 4 (lower is better) Translates to: SLVAPSTSISFR*SMIFCVKSTRY Trigger: GTACCTTGTGGATTTCACACAGAAGATCATAGACAAGCGAAAAGAAATGGAGGTGCTTGGTGCCACGAGAGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000136090.8 |
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| 3UTR CAA 72 bp | GCATCATTTAGCTCTTGCACTGGTGGAAAGAAGTGCTaGAAAGGTCCTAACACAGGTAAACAACGTGCTCTT | + |
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Preference number: 4 (lower is better) Translates to: ASFSSCTGGKKC*KGPNTGKQRAL Trigger: AAGAGCACGTTGTTTACCTGTGTTAGGACCTTTCAAGCACTTCTTTCCACCAGTGCAAGAGCTAAATGATGC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000136090.8 |
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| CDS-3UTR TCA 90 bp | TTTCTCAGATTAGCATTTATAATTTACACACCTGGAACCCCAAATGAGTCACAGCTCAGCTCGGAGTTCTaGCTGCTTCTTCGACCAGAA | + |
|
Preference number: 4 (lower is better) Translates to: FLRLAFIIYTPGTPNESQLSSEF*LLLRPE Trigger: TTCTGGTCGAAGAAGCAGTCAGAACTCCGAGCTGAG...CTGTGACTCATTTGGGGTTCCAGGTGTGTAAATTATAAATGCTAATCTGAGAAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000037783.7 |
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| CDS-3UTR GCA 90 bp | GGTAAGAAAATGAACAACCTAAGAGTCAATGAGCTCTCACTCCTCCCTGTCAACTTGTCTAGAGTCTTCTaGTCCTCAAGCTTTTGTTCC | + |
|
Preference number: 4 (lower is better) Translates to: GKKMNNLRVNELSLLPVNLSRVF*SSSFCS Trigger: GGAACAAAAGCTTGAGGAGCAGAAGACTCTAGACAA...GTTGACAGGGAGGAGTGAGAGCTCATTGACTCTTAGGTTGTTCATTTTCTTACC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000037783.7 ENSMUST00000136090.8 |
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| CDS-3UTR GCA 90 bp | ATACCAAGCGGTAAGAAAATGAACAACCTAAGAGTCAATGAGCTCTCACTCCTCCACCTGCATTTTGTTTaGTCCAGATACTTGGCTTCT | + |
|
Preference number: 4 (lower is better) Translates to: IPSGKKMNNLRVNELSLLHLHFV*SRYLAS Trigger: AGAAGCCAAGTATCTGGAGCAAACAAAATGCAGGTG...GAGGAGTGAGAGCTCATTGACTCTTAGGTTGTTCATTTTCTTACCGCTTGGTAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000037783.7 ENSMUST00000136090.8 |
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| CDS-3UTR CCA 90 bp | ATACCAAGCGGTAAGAAAATGAACAACCTAAGAGTCAATGAGCTCTCACTCCTCATATCATCTAGTGTTTaGAAAGTGACTGTGGGCGCT | + |
|
Preference number: 4 (lower is better) Translates to: IPSGKKMNNLRVNELSLLISSSV*KVTVGA Trigger: AGCGCCCACAGTCACTTTCCAAACACTAGATGATAT...GAGGAGTGAGAGCTCATTGACTCTTAGGTTGTTCATTTTCTTACCGCTTGGTAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000037783.7 |
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| 3UTR CAA 72 bp | TTAAAAAGTGTAAGAGATGAATCAAAGGGAAAGCACTaGCTGCCCAATCATGAAGACCTGAGTTCAGATCCC | + |
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Preference number: 4 (lower is better) Translates to: LKSVRDESKGKH*LPNHEDLSSDP Trigger: GGGATCTGAACTCAGGTCTTCATGATTGGGCAGCAAGTGCTTTCCCTTTGATTCATCTCTTACACTTTTTAA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000136090.8 |
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| 3UTR CAA 72 bp | AGACAACACACCTATTCAATTTTGAGCAAATCACAGTaGACAACATACAAGAGACACACAACAGCACGTCTC | + |
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Preference number: 4 (lower is better) Translates to: RQHTYSILSKSQ*TTYKRHTTARL Trigger: GAGACGTGCTGTTGTGTGTCTCTTGTATGTTGTCAACTGTGATTTGCTCAAAATTGAATAGGTGTGTTGTCT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000136090.8 |
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| CDS-3UTR CAA 90 bp | CCCTGTCAACTAATGTGGCCTCAAGCCTGTGCTCCCTGGGAAAGTACAGGAAGAATGATGACCTCCACCTaGCTGTTCTGGGCCACAGGA | + |
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Preference number: 5 (lower is better) Translates to: PCQLMWPQACAPWESTGRMMTST*LFWATG Trigger: TCCTGTGGCCCAGAACAGCAAGGTGGAGGTCATCAT...TCTTCCTGTACTTTCCCAGGGAGCACAGGCTTGAGGCCACATTAGTTGACAGGG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000037783.7 |
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| CDS-3UTR CAA 90 bp | GGAACCCCAAATGAGTCACAGCTGGGTCAGCATGGAGAGAAGATAGTCCCCCTAATACCCAACACCAAGTaGTCGGGCCTCATTTTCCCG | + |
|
Preference number: 5 (lower is better) Translates to: GTPNESQLGQHGEKIVPLIPNTK*SGLIFP Trigger: CGGGAAAATGAGGCCCGACAACTTGGTGTTGGGTAT...TAGGGGGACTATCTTCTCTCCATGCTGACCCAGCTGTGACTCATTTGGGGTTCC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000037783.7 |
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| CDS-3UTR CAA 90 bp | TCAACTAATGTGGCCTCAAGCCTGTGCTCCCTGGGAAAGTACAGGAAGAAAGAAGGGCAGGTACAGGCTTaGGCTCTGAGGGCTCAGGAA | + |
|
Preference number: 5 (lower is better) Translates to: STNVASSLCSLGKYRKKEGQVQA*ALRAQE Trigger: TTCCTGAGCCCTCAGAGCCAAAGCCTGTACCTGCCC...TTCTTTCTTCCTGTACTTTCCCAGGGAGCACAGGCTTGAGGCCACATTAGTTGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000037783.7 |
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| CDS-3UTR CAA 90 bp | ACCCCAAATGAGTCACAGCTGGGTCAGCATGGAGAGAAGATAGTCCCCCTATACAATGTCCCAAGTCACTaGGTGCTGATCCTGGTCTGC | + |
|
Preference number: 5 (lower is better) Translates to: TPNESQLGQHGEKIVPLYNVPSH*VLILVC Trigger: GCAGACCAGGATCAGCACCAAGTGACTTGGGACATT...GTATAGGGGGACTATCTTCTCTCCATGCTGACCCAGCTGTGACTCATTTGGGGT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000037783.7 |
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| CDS-3UTR CAA 90 bp | GGAACCCCAAATGAGTCACAGCTGGGTCAGCATGGAGAGAAGATAGTCCCCCTAACACCTGCATTTTGTTaGCTCCAGATACTTGGCTTC | + |
|
Preference number: 5 (lower is better) Translates to: GTPNESQLGQHGEKIVPLTPAFC*LQILGF Trigger: GAAGCCAAGTATCTGGAGCAAACAAAATGCAGGTGT...TAGGGGGACTATCTTCTCTCCATGCTGACCCAGCTGTGACTCATTTGGGGTTCC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000037783.7 ENSMUST00000136090.8 |
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| CDS-3UTR CAA 90 bp | GAGTCACAGCTGGGTCAGCATGGAGAGAAGATAGTCCCCCTATACCAAGCGGTATGTAACACCTGCATTTaGTTTGCTCCAGATACTTGG | + |
|
Preference number: 5 (lower is better) Translates to: ESQLGQHGEKIVPLYQAVCNTCI*FAPDTW Trigger: CCAAGTATCTGGAGCAAACAAAATGCAGGTGTTACA...TACCGCTTGGTATAGGGGGACTATCTTCTCTCCATGCTGACCCAGCTGTGACTC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000037783.7 ENSMUST00000136090.8 |
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| CDS-3UTR CAA 90 bp | GGAACCCCAAATGAGTCACAGCTGGGTCAGCATGGAGAGAAGATAGTCCCCCTACCATCTCCAATAGACTaGGTAAATCCTTTCTCATGC | + |
|
Preference number: 5 (lower is better) Translates to: GTPNESQLGQHGEKIVPLPSPID*VNPFSC Trigger: GCATGAGAAAGGATTTACCAAGTCTATTGGAGATGG...TAGGGGGACTATCTTCTCTCCATGCTGACCCAGCTGTGACTCATTTGGGGTTCC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000037783.7 |
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| CDS-3UTR CAA 90 bp | CCAAATGAGTCACAGCTGGGTCAGCATGGAGAGAAGATAGTCCCCCTATACCAAACACCTGCATTTTGTTaGCTCCAGATACTTGGCTTC | + |
|
Preference number: 5 (lower is better) Translates to: PNESQLGQHGEKIVPLYQTPAFC*LQILGF Trigger: GAAGCCAAGTATCTGGAGCAAACAAAATGCAGGTGT...TTGGTATAGGGGGACTATCTTCTCTCCATGCTGACCCAGCTGTGACTCATTTGG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000037783.7 ENSMUST00000136090.8 |
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| CDS-3UTR CAA 90 bp | GGAACCCCAAATGAGTCACAGCTGGGTCAGCATGGAGAGAAGATAGTCCCCCTATCCATTTCTTTTCGCTaGTCTATGATCTTCTGTGTG | + |
|
Preference number: 5 (lower is better) Translates to: GTPNESQLGQHGEKIVPLSISFR*SMIFCV Trigger: CACACAGAAGATCATAGACAAGCGAAAAGAAATGGA...TAGGGGGACTATCTTCTCTCCATGCTGACCCAGCTGTGACTCATTTGGGGTTCC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000037783.7 |
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| CDS-3UTR CAA 90 bp | ATACCAAGCGGTAAGAAAATGAACAACCTAAGAGTCAATGAGCTCTCACTCCTCTCTCTCTTCCTCGATTaGGGACTCTCTCGTGGCACC | + |
|
Preference number: 5 (lower is better) Translates to: IPSGKKMNNLRVNELSLLSLFLD*GLSRGT Trigger: GGTGCCACGAGAGAGTCCCAAATCGAGGAAGAGAGA...GAGGAGTGAGAGCTCATTGACTCTTAGGTTGTTCATTTTCTTACCGCTTGGTAT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000037783.7 |
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| CDS-3UTR CAA 90 bp | CCAAATGAGTCACAGCTGGGTCAGCATGGAGAGAAGATAGTCCCCCTATACCAATTGTTTGAATTCTTCTaGTTTTCGAAAGAGCTCCGC | + |
|
Preference number: 5 (lower is better) Translates to: PNESQLGQHGEKIVPLYQLFEFF*FSKELR Trigger: GCGGAGCTCTTTCGAAAACAAGAAGAATTCAAACAA...TTGGTATAGGGGGACTATCTTCTCTCCATGCTGACCCAGCTGTGACTCATTTGG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000037783.7 ENSMUST00000136090.8 |
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| CDS-3UTR CAA 90 bp | CAACTAATGTGGCCTCAAGCCTGTGCTCCCTGGGAAAGTACAGGAAGAAAGAAGTTGTTTCTTAACTCTTaGTCTCGGGCAAAGGCAAAA | + |
|
Preference number: 5 (lower is better) Translates to: QLMWPQACAPWESTGRKKLFLNS*SRAKAK Trigger: TTTTGCCTTTGCCCGAGACAAAGAGTTAAGAAACAA...CTTCTTTCTTCCTGTACTTTCCCAGGGAGCACAGGCTTGAGGCCACATTAGTTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000037783.7 |
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| CDS-3UTR CAA 90 bp | CAACTAATGTGGCCTCAAGCCTGTGCTCCCTGGGAAAGTACAGGAAGAAAGAAGTTATTCTCTGATCTGTaGTCTGTTCACGAAGCATCT | + |
|
Preference number: 5 (lower is better) Translates to: QLMWPQACAPWESTGRKKLFSDL*SVHEAS Trigger: AGATGCTTCGTGAACAGACAACAGATCAGAGAATAA...CTTCTTTCTTCCTGTACTTTCCCAGGGAGCACAGGCTTGAGGCCACATTAGTTG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000037783.7 |
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| CDS-3UTR CAA 90 bp | TCAACTAATGTGGCCTCAAGCCTGTGCTCCCTGGGAAAGTACAGGAAGAAAGAATTGTTTGAATTCTTCTaGTTTTCGAAAGAGCTCCGC | + |
|
Preference number: 5 (lower is better) Translates to: STNVASSLCSLGKYRKKELFEFF*FSKELR Trigger: GCGGAGCTCTTTCGAAAACAAGAAGAATTCAAACAA...TTCTTTCTTCCTGTACTTTCCCAGGGAGCACAGGCTTGAGGCCACATTAGTTGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000037783.7 ENSMUST00000136090.8 |
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| CDS-3UTR CAA 90 bp | ATACCAAGCGGTAAGAAAATGAACAACCTAAGAGTCAATGAGCTCTCACTCCTCTTCTTCTTCCTCCCATaGCTGACGCTGAAGTTCTTT | + |
|
Preference number: 5 (lower is better) Translates to: IPSGKKMNNLRVNELSLLFFFLP*LTLKFF Trigger: AAAGAACTTCAGCGTCAGCAATGGGAGGAAGAAGAA...GAGGAGTGAGAGCTCATTGACTCTTAGGTTGTTCATTTTCTTACCGCTTGGTAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000037783.7 |
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| CDS-3UTR CAA 90 bp | GGTAAGAAAATGAACAACCTAAGAGTCAATGAGCTCTCACTCCTCCCTGTCAACCTTCCAATTTTTCCCTaGCTTTGTCTAGAGTCTTCT | + |
|
Preference number: 5 (lower is better) Translates to: GKKMNNLRVNELSLLPVNLPIFP*LCLESS Trigger: AGAAGACTCTAGACAAAGCAAGGGAAAAATTGGAAG...GTTGACAGGGAGGAGTGAGAGCTCATTGACTCTTAGGTTGTTCATTTTCTTACC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000037783.7 ENSMUST00000136090.8 |
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| CDS-3UTR CAA 90 bp | TTTCTCAGATTAGCATTTATAATTTACACACCTGGAACCCCAAATGAGTCACAGTTCCTCACTGGGGTCTaGAGGAGGAGGTATGTCTTT | + |
|
Preference number: 5 (lower is better) Translates to: FLRLAFIIYTPGTPNESQFLTGV*RRRYVF Trigger: AAAGACATACCTCCTCCTCAAGACCCCAGTGAGGAA...CTGTGACTCATTTGGGGTTCCAGGTGTGTAAATTATAAATGCTAATCTGAGAAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000037783.7 |
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| CDS-3UTR CAA 90 bp | ATACCAAGCGGTAAGAAAATGAACAACCTAAGAGTCAATGAGCTCTCACTCCTCTCTTTTGTCGAAGCTTaGCCAGTCTTGCTTCTAACA | + |
|
Preference number: 5 (lower is better) Translates to: IPSGKKMNNLRVNELSLLSFVEA*PVLLLT Trigger: TGTTAGAAGCAAGACTGGCAAAGCTTCGACAAAAGA...GAGGAGTGAGAGCTCATTGACTCTTAGGTTGTTCATTTTCTTACCGCTTGGTAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000037783.7 |
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| CDS-3UTR CAA 90 bp | ATACCAAGCGGTAAGAAAATGAACAACCTAAGAGTCAATGAGCTCTCACTCCTCCTTCCAATTTTTCCCTaGCTTTGTCTAGAGTCTTCT | + |
|
Preference number: 5 (lower is better) Translates to: IPSGKKMNNLRVNELSLLLPIFP*LCLESS Trigger: AGAAGACTCTAGACAAAGCAAGGGAAAAATTGGAAG...GAGGAGTGAGAGCTCATTGACTCTTAGGTTGTTCATTTTCTTACCGCTTGGTAT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000037783.7 ENSMUST00000136090.8 |
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| CDS GCA 72 bp | CTTCTGCTCCTCAAGCTTTTGTTCCGCATCTTTCTCTaGTCGACTTGTAACACCTGCATTTTGTTTGCTCCA | + |
|
Preference number: 6 (lower is better) Translates to: LLLLKLLFRIFL*STCNTCILFAP Trigger: TGGAGCAAACAAAATGCAGGTGTTACAAGTCGAGCAGAGAAAGATGCGGAACAAAAGCTTGAGGAGCAGAAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000037783.7 ENSMUST00000136090.8 |
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| CDS GCA 72 bp | TCTTCCAATTTTTCCCTTGCTTTGTCTAGAGTCTTCTaGTCCTCAAGCTTTTGTTCCGCATCTTTCTCTGCT | + |
|
Preference number: 6 (lower is better) Translates to: SSNFSLALSRVF*SSSFCSASFSA Trigger: AGCAGAGAAAGATGCGGAACAAAAGCTTGAGGAGCAGAAGACTCTAGACAAAGCAAGGGAAAAATTGGAAGA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000037783.7 ENSMUST00000136090.8 |
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| CDS CAA 90 bp | TGTTCCGCATCTTTCTCTGCTCGACTTGTAACACCTGCATTTTGTTaGCTCCAGATACTTGGCTTCTTATTAATTGTCTTTGGTTTTCCA | + |
|
Preference number: 6 (lower is better) Translates to: CSASFSARLVTPAFC*LQILGFLLIVFGFP Trigger: TGGAAAACCAAAGACAATTAATAAGAAGCCAAGTATCTGGAGCAAACAAAATGCAGGTGTTACAAGTCGAGCAGAGAAAGATGCGGAACA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000037783.7 ENSMUST00000136090.8 |
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| CDS CAA 72 bp | CGCATCTTTCTCTGCTCGACTTGTAACACCTGCATTTaGTTTGCTCCAGATACTTGGCTTCTTATTAATTGT | + |
|
Preference number: 6 (lower is better) Translates to: RIFLCSTCNTCI*FAPDTWLLINC Trigger: ACAATTAATAAGAAGCCAAGTATCTGGAGCAAACAAAATGCAGGTGTTACAAGTCGAGCAGAGAAAGATGCG 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000037783.7 ENSMUST00000136090.8 |
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| CDS CAA 90 bp | CTTTTGTTCCGCATCTTTCTCTGCTCGACTTGTAACACCTGCATTTaGTTTGCTCCAGATACTTGGCTTCTTATTAATTGTCTTTGGTTT | + |
|
Preference number: 6 (lower is better) Translates to: LLFRIFLCSTCNTCI*FAPDTWLLINCLWF Trigger: AAACCAAAGACAATTAATAAGAAGCCAAGTATCTGGAGCAAACAAAATGCAGGTGTTACAAGTCGAGCAGAGAAAGATGCGGAACAAAAG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000037783.7 ENSMUST00000136090.8 |
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| CDS CAA 72 bp | TCTTTCTCTGCTCGACTTGTAACACCTGCATTTTGTTaGCTCCAGATACTTGGCTTCTTATTAATTGTCTTT | + |
|
Preference number: 6 (lower is better) Translates to: SFSARLVTPAFC*LQILGFLLIVF Trigger: AAAGACAATTAATAAGAAGCCAAGTATCTGGAGCAAACAAAATGCAGGTGTTACAAGTCGAGCAGAGAAAGA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000037783.7 ENSMUST00000136090.8 |
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