Pregenerated sensors for CCDC171 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000052407Ensembl transcript IDs: ENSMUST00000053414.13, ENSMUST00000125077.9, ENSMUST00000126429.8, ENSMUST00000231339.2
Found 279 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | TGGGCGGCACAGGCCTTCTCCTTCTCCCAGCAGTGCAGCACGTTCTaGAACTCCACCTTCAACGAGGTGATCAGAGCCTCGCGGTCTGCG | + |
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Preference number: 1 (lower is better) Translates to: WAAQAFSFSQQCSTF*NSTFNEVIRASRSA Trigger: CGCAGACCGCGAGGCTCTGATCACCTCGTTGAAGGTGGAGTTGCAGAACGTGCTGCACTGCTGGGAGAAGGAGAAGGCCTGTGCCGCCCA 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000125077.9 |
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| 3UTR GCA 90 bp | GTTAGCTTCTCCTCGGAGTCCTTCTGGAAGGCCTGCGACAGCTTCTaGAGCTCGCTCTCACACTGGGCGGCACAGGCCTTCTCCTTCTCC | + |
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Preference number: 1 (lower is better) Translates to: VSFSSESFWKACDSF*SSLSHWAAQAFSFS Trigger: GGAGAAGGAGAAGGCCTGTGCCGCCCAGTGTGAGAGCGAGCTGCAGAAGCTGTCGCAGGCCTTCCAGAAGGACTCCGAGGAGAAGCTAAC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000125077.9 |
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| 3UTR GCA 90 bp | CTTGTTCCTGGAGAAAGTCCCTCTGTGTGGATAAGGCACATGACCTaGTGTAGAGGGGACACAGCGCACCGGCCATCAGCGCACAGGCCG | + |
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Preference number: 1 (lower is better) Translates to: LVPGESPSVWIRHMT*CRGDTAHRPSAHRP Trigger: CGGCCTGTGCGCTGATGGCCGGTGCGCTGTGTCCCCTCTACAGCAGGTCATGTGCCTTATCCACACAGAGGGACTTTCTCCAGGAACAAG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000125077.9 |
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| 3UTR GCA 90 bp | CCGGCCATCAGCGCACAGGCCGCCAGCAAGCACGTCTGTTCCCTCTaGGTCCTGGACAATGTGGTTTTGAAGTGCGAATTCTCACGAACC | + |
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Preference number: 1 (lower is better) Translates to: PAISAQAASKHVCSL*VLDNVVLKCEFSRT Trigger: GGTTCGTGAGAATTCGCACTTCAAAACCACATTGTCCAGGACGCAGAGGGAACAGACGTGCTTGCTGGCGGCCTGTGCGCTGATGGCCGG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000125077.9 |
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| 3UTR GCA 90 bp | ACCTCTGGCCCACCCTGGAGCCCCTCCATTGCAAAGGTCTCCAGGTaGAGTTTGGGTAGCTGCAGGGTGAAGTCATTCCTAGTTGCTGCA | + |
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Preference number: 1 (lower is better) Translates to: TSGPPWSPSIAKVSR*SLGSCRVKSFLVAA Trigger: TGCAGCAACTAGGAATGACTTCACCCTGCAGCTACCCAAACTGCACCTGGAGACCTTTGCAATGGAGGGGCTCCAGGGTGGGCCAGAGGT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000125077.9 |
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| 3UTR TCA 90 bp | CAATGGAAGCAAGTCCCCAACTGTGTCCATAGGGGCGGCAGCTCTTaGAGGCACAGAGAGGTTGGAATGGTCTCGGGATCCCATCGACTG | + |
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Preference number: 1 (lower is better) Translates to: QWKQVPNCVHRGGSS*RHREVGMVSGSHRL Trigger: CAGTCGATGGGATCCCGAGACCATTCCAACCTCTCTGTGCCTTCAAGAGCTGCCGCCCCTATGGACACAGTTGGGGACTTGCTTCCATTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000125077.9 |
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| 3UTR GCA 90 bp | CGCAACACATTCTTTGTCTTTGGCTGCCATGCGGAGGGCACTCTCTaGATCACGGATGTTCTCCTCCAGTCGACGCTTGTCCTGCTCCAG | + |
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Preference number: 1 (lower is better) Translates to: RNTFFVFGCHAEGTL*ITDVLLQSTLVLLQ Trigger: CTGGAGCAGGACAAGCGTCGACTGGAGGAGAACATCCGTGATGCAGAGAGTGCCCTCCGCATGGCAGCCAAAGACAAAGAATGTGTTGCG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000125077.9 |
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| 3UTR CCA 90 bp | AAACTTTTAATCATGGCCTGGCATGCCACCACCTCTGGCCCACCCTaGAGCCCCTCCATTGCAAAGGTCTCCAGGTGCAGTTTGGGTAGC | + |
|
Preference number: 1 (lower is better) Translates to: KLLIMAWHATTSGPP*SPSIAKVSRCSLGS Trigger: GCTACCCAAACTGCACCTGGAGACCTTTGCAATGGAGGGGCTCCAGGGTGGGCCAGAGGTGGTGGCATGCCAGGCCATGATTAAAAGTTT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000125077.9 |
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| 3UTR GCA 90 bp | TCTGTCACCTCGAGGCGCAGGGAGCGGCGCTCAACCTCAGCTGCGTaGAGCCTTTGCGTAAACCCAAATATTTGCTTTTGTAACGCTGCA | + |
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Preference number: 1 (lower is better) Translates to: SVTSRRRERRSTSAA*SLCVNPNICFCNAA Trigger: TGCAGCGTTACAAAAGCAAATATTTGGGTTTACGCAAAGGCTGCACGCAGCTGAGGTTGAGCGCCGCTCCCTGCGCCTCGAGGTGACAGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000125077.9 |
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| 3UTR GCA 90 bp | TCGAGGCGCAGGGAGCGGCGCTCAACCTCAGCTGCGTGCAGCCTTTaGGTAAACCCAAATATTTGCTTTTGTAACGCTGCAGTGCTTTTC | + |
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Preference number: 1 (lower is better) Translates to: SRRRERRSTSAACSL*VNPNICFCNAAVLF Trigger: GAAAAGCACTGCAGCGTTACAAAAGCAAATATTTGGGTTTACGCAAAGGCTGCACGCAGCTGAGGTTGAGCGCCGCTCCCTGCGCCTCGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000125077.9 |
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| 3UTR GCA 90 bp | TGTGTTTGCAGACTCTGTGACTTGTCCAGCTCCTTTTTCATCTCGTaGACGGTCCGTTTGTATTCTGTCACCTCGAGGCGCAGGGAGCGG | + |
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Preference number: 1 (lower is better) Translates to: CVCRLCDLSSSFFIS*TVRLYSVTSRRRER Trigger: CCGCTCCCTGCGCCTCGAGGTGACAGAATACAAACGGACCGTGCACGAGATGAAAAAGGAGCTGGACAAGTCACAGAGTCTGCAAACACA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000125077.9 |
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| 3UTR CCA 90 bp | AATCTGTCAAGGTCCGCCTCAAAGTCTCAAGGACGACGGAGAAGCTaGGAGGCTTATCTTTGTCCTTGTGGACGCCTGATGTCCACTGCG | + |
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Preference number: 1 (lower is better) Translates to: NLSRSASKSQGRRRS*EAYLCPCGRLMSTA Trigger: CGCAGTGGACATCAGGCGTCCACAAGGACAAAGATAAGCCTCCCAGCTTCTCCGTCGTCCTTGAGACTTTGAGGCGGACCTTGACAGATT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000125077.9 |
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| 3UTR CCA 90 bp | GTGTCCATAGGGGCGGCAGCTCTTGAAGGCACAGAGAGGTTGGAATaGTCTCGGGATCCCATCGACTGCAAACTTTCATTCTCTCTTAGA | + |
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Preference number: 1 (lower is better) Translates to: VSIGAAALEGTERLE*SRDPIDCKLSFSLR Trigger: TCTAAGAGAGAATGAAAGTTTGCAGTCGATGGGATCCCGAGACCATTCCAACCTCTCTGTGCCTTCAAGAGCTGCCGCCCCTATGGACAC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000125077.9 |
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| 3UTR GCA 90 bp | AAGCACGTCTGTTCCCTCTGCGTCCTGGACAATGTGGTTTTGAAGTaGGAATTCTCACGAACCAGTTGTTCATGGGAGGTCTCAATGCGG | + |
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Preference number: 1 (lower is better) Translates to: KHVCSLCVLDNVVLK*EFSRTSCSWEVSMR Trigger: CCGCATTGAGACCTCCCATGAACAACTGGTTCGTGAGAATTCGCACTTCAAAACCACATTGTCCAGGACGCAGAGGGAACAGACGTGCTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000125077.9 |
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| 3UTR GCA 90 bp | GAAAAGAAAGGCACAGGATTGGCCCAAAAGCTTGAGTCTGTTTGCTaGCAAGATTGCAATCACGCCTTTCCGGAAGACACGGACCAATCC | + |
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Preference number: 1 (lower is better) Translates to: EKKGTGLAQKLESVC*QDCNHAFPEDTDQS Trigger: GGATTGGTCCGTGTCTTCCGGAAAGGCGTGATTGCAATCTTGGCAGCAAACAGACTCAAGCTTTTGGGCCAATCCTGTGCCTTTCTTTTC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000125077.9 |
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| 3UTR GCA 90 bp | GGTGAAAAGAAAGGCACAGGATTGGCCCAAAAGCTTGAGTCTGTTTaGTGCCAAGATTGCAATCACGCCTTTCCGGAAGACACGGACCAA | + |
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Preference number: 1 (lower is better) Translates to: GEKKGTGLAQKLESV*CQDCNHAFPEDTDQ Trigger: TTGGTCCGTGTCTTCCGGAAAGGCGTGATTGCAATCTTGGCAGCAAACAGACTCAAGCTTTTGGGCCAATCCTGTGCCTTTCTTTTCACC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000125077.9 |
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| 3UTR GCA 90 bp | CTTGAAGGCACAGAGAGGTTGGAATGGTCTCGGGATCCCATCGACTaGAAACTTTCATTCTCTCTTAGACAAGCTGTATGGAGCTCAGAC | + |
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Preference number: 1 (lower is better) Translates to: LEGTERLEWSRDPID*KLSFSLRQAVWSSD Trigger: GTCTGAGCTCCATACAGCTTGTCTAAGAGAGAATGAAAGTTTGCAGTCGATGGGATCCCGAGACCATTCCAACCTCTCTGTGCCTTCAAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000125077.9 |
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| 3UTR TCA 90 bp | TTGATCTGTTCCGCCACCTTGTTGAAGGTGTCTTCCTGCGTCTGCTaGAGCTCTCTCATCGTATCGGACTTGTTTTTACAGATATACTCC | + |
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Preference number: 1 (lower is better) Translates to: LICSATLLKVSSCVC*SSLIVSDLFLQIYS Trigger: GGAGTATATCTGTAAAAACAAGTCCGATACGATGAGAGAGCTTCAGCAGACGCAGGAAGACACCTTCAACAAGGTGGCGGAACAGATCAA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000125077.9 |
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| 3UTR GCA 90 bp | CCTGTTAAGGTCTGCAATGAGGGCATCAACATTCTCCTGCAAGACTaGACAAAGCTCAGACCAAGAGAATTTATCCAACATGCCTTCTGG | + |
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Preference number: 1 (lower is better) Translates to: PVKVCNEGINILLQD*TKLRPREFIQHAFW Trigger: CCAGAAGGCATGTTGGATAAATTCTCTTGGTCTGAGCTTTGTGCAGTCTTGCAGGAGAATGTTGATGCCCTCATTGCAGACCTTAACAGG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000125077.9 |
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| 3UTR CCA 90 bp | CCTTCTTTACAACTCTCCATCCAGGTGAAAAGAAAGGCACAGGATTaGCCCAAAAGCTTGAGTCTGTTTGCTGCCAAGATTGCAATCACG | + |
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Preference number: 1 (lower is better) Translates to: PSLQLSIQVKRKAQD*PKSLSLFAAKIAIT Trigger: CGTGATTGCAATCTTGGCAGCAAACAGACTCAAGCTTTTGGGCCAATCCTGTGCCTTTCTTTTCACCTGGATGGAGAGTTGTAAAGAAGG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000125077.9 |
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| 3UTR TCA 90 bp | GCTCAGACCAAGAGAATTTATCCAACATGCCTTCTGGTTGTTTTATaGGCACACAGCCTGCTACCAAGTGCTGATACAAGGTGTGAAGGA | + |
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Preference number: 1 (lower is better) Translates to: AQTKRIYPTCLLVVL*AHSLLPSADTRCEG Trigger: TCCTTCACACCTTGTATCAGCACTTGGTAGCAGGCTGTGTGCTCATAAAACAACCAGAAGGCATGTTGGATAAATTCTCTTGGTCTGAGC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000125077.9 |
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| 3UTR GCA 90 bp | GATATACTCCAGATGGCTTATCTTCTCATTAGCCCTGTTAAGGTCTaGAATGAGGGCATCAACATTCTCCTGCAAGACTGCACAAAGCTC | + |
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Preference number: 1 (lower is better) Translates to: DILQMAYLLISPVKV*NEGINILLQDCTKL Trigger: GAGCTTTGTGCAGTCTTGCAGGAGAATGTTGATGCCCTCATTGCAGACCTTAACAGGGCTAATGAGAAGATAAGCCATCTGGAGTATATC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000125077.9 |
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| 3UTR GCA 90 bp | TCATTAGCCCTGTTAAGGTCTGCAATGAGGGCATCAACATTCTCCTaGAAGACTGCACAAAGCTCAGACCAAGAGAATTTATCCAACATG | + |
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Preference number: 1 (lower is better) Translates to: SLALLRSAMRASTFS*KTAQSSDQENLSNM Trigger: CATGTTGGATAAATTCTCTTGGTCTGAGCTTTGTGCAGTCTTGCAGGAGAATGTTGATGCCCTCATTGCAGACCTTAACAGGGCTAATGA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000125077.9 |
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| 3UTR CCA 90 bp | GACTGCACAAAGCTCAGACCAAGAGAATTTATCCAACATGCCTTCTaGTTGTTTTATGAGCACACAGCCTGCTACCAAGTGCTGATACAA | + |
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Preference number: 1 (lower is better) Translates to: DCTKLRPREFIQHAF*LFYEHTACYQVLIQ Trigger: TTGTATCAGCACTTGGTAGCAGGCTGTGTGCTCATAAAACAACCAGAAGGCATGTTGGATAAATTCTCTTGGTCTGAGCTTTGTGCAGTC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000125077.9 |
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| 3UTR GCA 90 bp | TCGTGGGTGATCAATTTAGAGTGCTTGAATTCATTTAATTGTGTTTaGAGACTCTGTGACTTGTCCAGCTCCTTTTTCATCTCGTGCACG | + |
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Preference number: 1 (lower is better) Translates to: SWVINLECLNSFNCV*RLCDLSSSFFISCT Trigger: CGTGCACGAGATGAAAAAGGAGCTGGACAAGTCACAGAGTCTGCAAACACAATTAAATGAATTCAAGCACTCTAAATTGATCACCCACGA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000125077.9 |
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| 3UTR CAA 90 bp | CTCTGTGACTTGTCCAGCTCCTTTTTCATCTCGTGCACGGTCCGTTaGTATTCTGTCACCTCGAGGCGCAGGGAGCGGCGCTCAACCTCA | + |
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Preference number: 2 (lower is better) Translates to: LCDLSSSFFISCTVR*YSVTSRRRERRSTS Trigger: TGAGGTTGAGCGCCGCTCCCTGCGCCTCGAGGTGACAGAATACAAACGGACCGTGCACGAGATGAAAAAGGAGCTGGACAAGTCACAGAG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000125077.9 |
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| 3UTR-3UTR CCA 90 bp | GCCCTCCTCTGCACCTCCAGGAGAAGTTCAGAGTACTGGAACTCCAGCTCCTTCGGACGACGGAGAAGCTaGGAGGCTTATCTTTGTCCT | + |
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Preference number: 2 (lower is better) Translates to: ALLCTSRRSSEYWNSSSFGRRRS*EAYLCP Trigger: AGGACAAAGATAAGCCTCCCAGCTTCTCCGTCGTCC...GAAGGAGCTGGAGTTCCAGTACTCTGAACTTCTCCTGGAGGTGCAGAGGAGGGC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000125077.9 |
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| 3UTR-3UTR CCA 90 bp | CTGATAACCGTACCTAGAAGGTCAGAACTGGTGAGCCACGCGAGTGCCTGTAAATGCCAGCAGCTCTCCTaGGCCTTGATCTGTTCCGCC | + |
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Preference number: 2 (lower is better) Translates to: LITVPRRSELVSHASACKCQQLS*ALICSA Trigger: GGCGGAACAGATCAAGGCCCAGGAGAGCTGCTGGCA...TTTACAGGCACTCGCGTGGCTCACCAGTTCTGACCTTCTAGGTACGGTTATCAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000125077.9 |
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| 3UTR-3UTR CCA 90 bp | CTGATAACCGTACCTAGAAGGTCAGAACTGGTGAGCCACGCGAGTGCCTGTAAAACCGCTGACAACGCCTaGGCCAGGGTTCTAATTTCC | + |
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Preference number: 2 (lower is better) Translates to: LITVPRRSELVSHASACKTADNA*ARVLIS Trigger: GGAAATTAGAACCCTGGCCCAGGCGTTGTCAGCGGT...TTTACAGGCACTCGCGTGGCTCACCAGTTCTGACCTTCTAGGTACGGTTATCAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000125077.9 |
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| 3UTR CAA 90 bp | GCCAGCAAGCACGTCTGTTCCCTCTGCGTCCTGGACAATGTGGTTTaGAAGTGCGAATTCTCACGAACCAGTTGTTCATGGGAGGTCTCA | + |
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Preference number: 2 (lower is better) Translates to: ASKHVCSLCVLDNVV*KCEFSRTSCSWEVS Trigger: TGAGACCTCCCATGAACAACTGGTTCGTGAGAATTCGCACTTCAAAACCACATTGTCCAGGACGCAGAGGGAACAGACGTGCTTGCTGGC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000125077.9 |
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| 3UTR-3UTR GCA 90 bp | GCCCAAAAGCTTGAGTCTGTTTGCTGCCAAGATTGCAATCACGCCTTTCCGGAAACGCCTGATGTCCACTaGGCTGACACGCTAAAGCTG | + |
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Preference number: 2 (lower is better) Translates to: AQKLESVCCQDCNHAFPETPDVH*ADTLKL Trigger: CAGCTTTAGCGTGTCAGCGCAGTGGACATCAGGCGT...TTCCGGAAAGGCGTGATTGCAATCTTGGCAGCAAACAGACTCAAGCTTTTGGGC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000125077.9 |
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| 3UTR-3UTR GCA 90 bp | CTGGTAGACATCCATGAAACTTTTAATCATGGCCTGGCATGCCACCACCTCTGGTTCAGCTCCTGCAGCTaGTGGGCCTGTTCATTCAGC | + |
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Preference number: 2 (lower is better) Translates to: LVDIHETFNHGLACHHLWFSSCS*WACSFS Trigger: GCTGAATGAACAGGCCCAGCAGCTGCAGGAGCTGAA...CCAGAGGTGGTGGCATGCCAGGCCATGATTAAAAGTTTCATGGATGTCTACCAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000125077.9 |
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| 3UTR-3UTR GCA 90 bp | CTGGTAGACATCCATGAAACTTTTAATCATGGCCTGGCATGCCACCACCTCTGGTTCTGTGCCCTCCTCTaGACCTCCAGGAGAAGTTCA | + |
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Preference number: 2 (lower is better) Translates to: LVDIHETFNHGLACHHLWFCALL*TSRRSS Trigger: TGAACTTCTCCTGGAGGTGCAGAGGAGGGCACAGAA...CCAGAGGTGGTGGCATGCCAGGCCATGATTAAAAGTTTCATGGATGTCTACCAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000125077.9 |
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| 3UTR-3UTR GCA 90 bp | CTGGTAGACATCCATGAAACTTTTAATCATGGCCTGGCATGCCACCACCTCTGGCACGTCTGTTCCCTCTaGGTCCTGGACAATGTGGTT | + |
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Preference number: 2 (lower is better) Translates to: LVDIHETFNHGLACHHLWHVCSL*VLDNVV Trigger: AACCACATTGTCCAGGACGCAGAGGGAACAGACGTG...CCAGAGGTGGTGGCATGCCAGGCCATGATTAAAAGTTTCATGGATGTCTACCAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000125077.9 |
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| 3UTR-3UTR GCA 90 bp | TCTCAGCTCCATCTTTGCCTCGGAGAGACTCTTAACAGCTTCTCCAAGAGTCTGTCAACCTCAGCTGCGTaGAGCCTTTGCGTAAACCCA | + |
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Preference number: 2 (lower is better) Translates to: SQLHLCLGETLNSFSKSLSTSAA*SLCVNP Trigger: TGGGTTTACGCAAAGGCTGCACGCAGCTGAGGTTGA...CAGACTCTTGGAGAAGCTGTTAAGAGTCTCTCCGAGGCAAAGATGGAGCTGAGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000125077.9 |
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| 3UTR-3UTR GCA 90 bp | CTGGTAGACATCCATGAAACTTTTAATCATGGCCTGGCATGCCACCACCTCTGGTTCTTTGTCTTTGGCTaGCATGCGGAGGGCACTCTC | + |
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Preference number: 2 (lower is better) Translates to: LVDIHETFNHGLACHHLWFFVFG*HAEGTL Trigger: GAGAGTGCCCTCCGCATGGCAGCCAAAGACAAAGAA...CCAGAGGTGGTGGCATGCCAGGCCATGATTAAAAGTTTCATGGATGTCTACCAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000125077.9 |
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| 3UTR CAA 90 bp | TCATCTACCGCTGACAACGCCTGGGCCAGGGTTCTAATTTCCAGTTaGAACAGTTCCAAGCTGTTGACTTGTTCCTGGAGAAAGTCCCTC | + |
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Preference number: 2 (lower is better) Translates to: SSTADNAWARVLISS*NSSKLLTCSWRKSL Trigger: GAGGGACTTTCTCCAGGAACAAGTCAACAGCTTGGAACTGTTCAAACTGGAAATTAGAACCCTGGCCCAGGCGTTGTCAGCGGTAGATGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000125077.9 |
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| 3UTR-3UTR TCA 90 bp | TCAGCAACATTTGTGCCTGCTGTTCCCGAAGCAATGCGTTATTTAGTTCTTCACAGCTCTCCTGGGCCTTaGTCTGTTCCGCCACCTTGT | + |
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Preference number: 2 (lower is better) Translates to: SATFVPAVPEAMRYLVLHSSPGP*SVPPPC Trigger: ACAAGGTGGCGGAACAGATCAAGGCCCAGGAGAGCT...GTGAAGAACTAAATAACGCATTGCTTCGGGAACAGCAGGCACAAATGTTGCTGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000125077.9 |
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| 3UTR-3UTR GCA 90 bp | CTCTGCACCTCCAGGAGAAGTTCAGAGTACTGGAACTCCAGCTCCTTCTTCTGCGCATCAACATTCTCCTaGAAGACTGCACAAAGCTCA | + |
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Preference number: 2 (lower is better) Translates to: LCTSRRSSEYWNSSSFFCASTFS*KTAQSS Trigger: TGAGCTTTGTGCAGTCTTGCAGGAGAATGTTGATGC...GCAGAAGAAGGAGCTGGAGTTCCAGTACTCTGAACTTCTCCTGGAGGTGCAGAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000125077.9 |
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| 3UTR-3UTR TCA 90 bp | GCTGGAGTGCAATTCAAGTCTATAGTTCAGCTCCTGCAGCTGCTGGGCCTGTTCTGGACAATGTGGTTTTaGAGTGCGAATTCTCACGAA | + |
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Preference number: 2 (lower is better) Translates to: AGVQFKSIVQLLQLLGLFWTMWF*SANSHE Trigger: TTCGTGAGAATTCGCACTTCAAAACCACATTGTCCA...GAACAGGCCCAGCAGCTGCAGGAGCTGAACTATAGACTTGAATTGCACTCCAGC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000125077.9 |
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| 3UTR-3UTR GCA 90 bp | CTGATAACCGTACCTAGAAGGTCAGAACTGGTGAGCCACGCGAGTGCCTGTAAAAGCCCTGTTAAGGTCTaGAATGAGGGCATCAACATT | + |
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Preference number: 2 (lower is better) Translates to: LITVPRRSELVSHASACKSPVKV*NEGINI Trigger: AATGTTGATGCCCTCATTGCAGACCTTAACAGGGCT...TTTACAGGCACTCGCGTGGCTCACCAGTTCTGACCTTCTAGGTACGGTTATCAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000125077.9 |
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| 3UTR-3UTR GCA 90 bp | ATGACTTCTTGCAGCTCTGTCATAGAACTGATAACCGTACCTAGAAGGTCAGAATCCTTCTTCTGCTTCTaGCAGCAGCTCTCCTGGGCC | + |
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Preference number: 2 (lower is better) Translates to: MTSCSSVIELITVPRRSESFFCF*QQLSWA Trigger: GGCCCAGGAGAGCTGCTGGCAGAAGCAGAAGAAGGA...TTCTGACCTTCTAGGTACGGTTATCAGTTCTATGACAGAGCTGCAAGAAGTCAT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000125077.9 |
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| 3UTR-3UTR GCA 90 bp | CTGGTAGACATCCATGAAACTTTTAATCATGGCCTGGCATGCCACCACCTCTGGTTCTTGAAATTTCTGTaGCCTCCTCTGCACCTCCAG | + |
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Preference number: 2 (lower is better) Translates to: LVDIHETFNHGLACHHLWFLKFL*PPLHLQ Trigger: CTGGAGGTGCAGAGGAGGGCACAGAAATTTCAAGAA...CCAGAGGTGGTGGCATGCCAGGCCATGATTAAAAGTTTCATGGATGTCTACCAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000125077.9 |
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| 3UTR-3UTR GCA 90 bp | TCTCAGCTCCATCTTTGCCTCGGAGAGACTCTTAACAGCTTCTCCAAGAGTCTGCTTGAGTCTGTTTGCTaGCAAGATTGCAATCACGCC | + |
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Preference number: 2 (lower is better) Translates to: SQLHLCLGETLNSFSKSLLESVC*QDCNHA Trigger: GGCGTGATTGCAATCTTGGCAGCAAACAGACTCAAG...CAGACTCTTGGAGAAGCTGTTAAGAGTCTCTCCGAGGCAAAGATGGAGCTGAGA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000125077.9 |
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| 3UTR-3UTR TCA 90 bp | TCAGCAACATTTGTGCCTGCTGTTCCCGAAGCAATGCGTTATTTAGTTCTTCACTCTTCCTGCGTCTGCTaGAGCTCTCTCATCGTATCG | + |
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Preference number: 2 (lower is better) Translates to: SATFVPAVPEAMRYLVLHSSCVC*SSLIVS Trigger: CGATACGATGAGAGAGCTTCAGCAGACGCAGGAAGA...GTGAAGAACTAAATAACGCATTGCTTCGGGAACAGCAGGCACAAATGTTGCTGA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000125077.9 |
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| 3UTR-3UTR GCA 90 bp | CTGGTAGACATCCATGAAACTTTTAATCATGGCCTGGCATGCCACCACCTCTGGTATGAGCACACAGCCTaGTACCAAGTGCTGATACAA | + |
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Preference number: 2 (lower is better) Translates to: LVDIHETFNHGLACHHLWYEHTA*YQVLIQ Trigger: TTGTATCAGCACTTGGTAGCAGGCTGTGTGCTCATA...CCAGAGGTGGTGGCATGCCAGGCCATGATTAAAAGTTTCATGGATGTCTACCAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000125077.9 |
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| 3UTR-3UTR GCA 90 bp | GCTGGAGTGCAATTCAAGTCTATAGTTCAGCTCCTGCAGCTGCTGGGCCTGTTCAATGTGGTTTTGAAGTaGGAATTCTCACGAACCAGT | + |
|
Preference number: 2 (lower is better) Translates to: AGVQFKSIVQLLQLLGLFNVVLK*EFSRTS Trigger: ACTGGTTCGTGAGAATTCGCACTTCAAAACCACATT...GAACAGGCCCAGCAGCTGCAGGAGCTGAACTATAGACTTGAATTGCACTCCAGC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000125077.9 |
||
| 3UTR-3UTR CCA 90 bp | CTCTGCACCTCCAGGAGAAGTTCAGAGTACTGGAACTCCAGCTCCTTCTTCTGCCAGATATACTCCAGATaGCTTATCTTCTCATTAGCC | + |
|
Preference number: 2 (lower is better) Translates to: LCTSRRSSEYWNSSSFFCQIYSR*LIFSLA Trigger: GGCTAATGAGAAGATAAGCCATCTGGAGTATATCTG...GCAGAAGAAGGAGCTGGAGTTCCAGTACTCTGAACTTCTCCTGGAGGTGCAGAG 48% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000125077.9 |
||
| 3UTR CAA 90 bp | GCCTTCTTTACAACTCTCCATCCAGGTGAAAAGAAAGGCACAGGATaGGCCCAAAAGCTTGAGTCTGTTTGCTGCCAAGATTGCAATCAC | + |
|
Preference number: 2 (lower is better) Translates to: AFFTTLHPGEKKGTG*AQKLESVCCQDCNH Trigger: GTGATTGCAATCTTGGCAGCAAACAGACTCAAGCTTTTGGGCCAATCCTGTGCCTTTCTTTTCACCTGGATGGAGAGTTGTAAAGAAGGC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000125077.9 |
||
| 3UTR-3UTR TCA 90 bp | CTGATAACCGTACCTAGAAGGTCAGAACTGGTGAGCCACGCGAGTGCCTGTAAATTTTCTGCAATTTCTTaGAATTTCTGTGCCCTCCTC | + |
|
Preference number: 2 (lower is better) Translates to: LITVPRRSELVSHASACKFSAIS*NFCALL Trigger: GAGGAGGGCACAGAAATTTCAAGAAATTGCAGAAAA...TTTACAGGCACTCGCGTGGCTCACCAGTTCTGACCTTCTAGGTACGGTTATCAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000125077.9 |
||
| 3UTR-3UTR CCA 90 bp | AGTTCCAAGCTGTTGACTTGTTCCTGGAGAAAGTCCCTCTGTGTGGATAAGGCAAGAAGTTCAGAGTACTaGAACTCCAGCTCCTTCTTC | + |
|
Preference number: 2 (lower is better) Translates to: SSKLLTCSWRKSLCVDKARSSEY*NSSSFF Trigger: GAAGAAGGAGCTGGAGTTCCAGTACTCTGAACTTCT...TGCCTTATCCACACAGAGGGACTTTCTCCAGGAACAAGTCAACAGCTTGGAACT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000125077.9 |
||
| 3UTR-3UTR TCA 90 bp | TTTGTGGTACTAGGGATCAAACCCAAGGCCTCAGCCAGTCAAGGTAAGGACTCTAATAAAGAGCCTTGCTaGAGTACAACACAGCAGATA | + |
|
Preference number: 2 (lower is better) Translates to: FVVLGIKPKASASQGKDSNKEPC*STTQQI Trigger: TATCTGCTGTGTTGTACTTCAGCAAGGCTCTTTATT...AGAGTCCTTACCTTGACTGGCTGAGGCCTTGGGTTTGATCCCTAGTACCACAAA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000126429.8 |
||
| 3UTR CAA 90 bp | TGCACAAAGCTCAGACCAAGAGAATTTATCCAACATGCCTTCTGGTaGTTTTATGAGCACACAGCCTGCTACCAAGTGCTGATACAAGGT | + |
|
Preference number: 2 (lower is better) Translates to: CTKLRPREFIQHAFW*FYEHTACYQVLIQG Trigger: ACCTTGTATCAGCACTTGGTAGCAGGCTGTGTGCTCATAAAACAACCAGAAGGCATGTTGGATAAATTCTCTTGGTCTGAGCTTTGTGCA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000125077.9 |
||
| 3UTR-3UTR TCA 90 bp | TTTGTGGTACTAGGGATCAAACCCAAGGCCTCAGCCAGTCAAGGTAAGGACTCTTTTTTCCTGCATAAGTaGCTCGTATTCTTGATTGCA | + |
|
Preference number: 2 (lower is better) Translates to: FVVLGIKPKASASQGKDSFFLHK*LVFLIA Trigger: TGCAATCAAGAATACGAGTCACTTATGCAGGAAAAA...AGAGTCCTTACCTTGACTGGCTGAGGCCTTGGGTTTGATCCCTAGTACCACAAA 44% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt. Matches the following 1 transcripts: ENSMUST00000126429.8 |
||
| 3UTR-3UTR GCA 90 bp | AAAAGCTTGAGTCTGTTTGCTGCCAAGATTGCAATCACGCCTTTCCGGAAGACACATGGGAGGTCTCAATaGGGTTCAATTTTTCTGAGT | + |
|
Preference number: 2 (lower is better) Translates to: KSLSLFAAKIAITPFRKTHGRSQ*GSIFLS Trigger: ACTCAGAAAAATTGAACCGCATTGAGACCTCCCATG...TGTCTTCCGGAAAGGCGTGATTGCAATCTTGGCAGCAAACAGACTCAAGCTTTT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000125077.9 |
||
| 3UTR-3UTR GCA 90 bp | ATGAGGGCATCAACATTCTCCTGCAAGACTGCACAAAGCTCAGACCAAGAGAATTCCGTCAGCTTATCCTaGAGCTCCTTTGTATTTTTA | + |
|
Preference number: 2 (lower is better) Translates to: MRASTFSCKTAQSSDQENSVSLS*SSFVFL Trigger: TAAAAATACAAAGGAGCTGCAGGATAAGCTGACGGA...ATTCTCTTGGTCTGAGCTTTGTGCAGTCTTGCAGGAGAATGTTGATGCCCTCAT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000125077.9 |
||
| 3UTR-3UTR GCA 90 bp | ATGACTTCTTGCAGCTCTGTCATAGAACTGATAACCGTACCTAGAAGGTCAGAACGGTACACACTAGCATaGCTATGCCTTCTTTACAAC | + |
|
Preference number: 2 (lower is better) Translates to: MTSCSSVIELITVPRRSERYTLA*LCLLYN Trigger: GTTGTAAAGAAGGCATAGGCATGCTAGTGTGTACCG...TTCTGACCTTCTAGGTACGGTTATCAGTTCTATGACAGAGCTGCAAGAAGTCAT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000125077.9 |
||
| 3UTR-3UTR CCA 90 bp | AAAAGCTTGAGTCTGTTTGCTGCCAAGATTGCAATCACGCCTTTCCGGAAGACAATCCAACATGCCTTCTaGTTGTTTTATGAGCACACA | + |
|
Preference number: 2 (lower is better) Translates to: KSLSLFAAKIAITPFRKTIQHAF*LFYEHT Trigger: TGTGTGCTCATAAAACAACCAGAAGGCATGTTGGAT...TGTCTTCCGGAAAGGCGTGATTGCAATCTTGGCAGCAAACAGACTCAAGCTTTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000125077.9 |
||
| 3UTR-3UTR CCA 90 bp | TGTGGTTTTGAAGTGCGAATTCTCACGAACCAGTTGTTCATGGGAGGTCTCAATTCTCAATCTTTTGTTTaGTGGAATCGAGTTCGTTGG | + |
|
Preference number: 2 (lower is better) Translates to: CGFEVRILTNQLFMGGLNSQSFV*WNRVRW Trigger: CCAACGAACTCGATTCCACCAAACAAAAGATTGAGA...ATTGAGACCTCCCATGAACAACTGGTTCGTGAGAATTCGCACTTCAAAACCACA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000125077.9 |
||
| 3UTR CAA 90 bp | TTAGAGTGCTTGAATTCATTTAATTGTGTTTGCAGACTCTGTGACTaGTCCAGCTCCTTTTTCATCTCGTGCACGGTCCGTTTGTATTCT | + |
|
Preference number: 2 (lower is better) Translates to: LECLNSFNCVCRLCD*SSSFFISCTVRLYS Trigger: AGAATACAAACGGACCGTGCACGAGATGAAAAAGGAGCTGGACAAGTCACAGAGTCTGCAAACACAATTAAATGAATTCAAGCACTCTAA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000125077.9 |
||
| 3UTR CAA 90 bp | CTTATCCTGCAGCTCCTTTGTATTTTTAATGTGAGTCTCAATCTTTaGTTTGGTGGAATCGAGTTCGTTGGATGTCTTTTCCTTGGCATC | + |
|
Preference number: 2 (lower is better) Translates to: LILQLLCIFNVSLNL*FGGIEFVGCLFLGI Trigger: GATGCCAAGGAAAAGACATCCAACGAACTCGATTCCACCAAACAAAAGATTGAGACTCACATTAAAAATACAAAGGAGCTGCAGGATAAG 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000125077.9 |
||
| 3UTR CAA 90 bp | GCCATTGCCGAGCTAAGTTTATCCATTAGTTTTGCAAAAGAATTCTaGGCTGCACCTATGAGTAAATGTCCACAAATCCTGGAATTTGGA | + |
|
Preference number: 2 (lower is better) Translates to: AIAELSLSISFAKEF*AAPMSKCPQILEFG Trigger: TCCAAATTCCAGGATTTGTGGACATTTACTCATAGGTGCAGCCAAGAATTCTTTTGCAAAACTAATGGATAAACTTAGCTCGGCAATGGC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000125077.9 |
||
| 3UTR-3UTR CCA 90 bp | GATTGCAATTTTGAATTATATTGTCTCGTTCCTCCAAGTCATGTTCAAATCTCCTTAATTCCGGCACTCTaGGGGCAGATGAAGACAGAT | + |
|
Preference number: 2 (lower is better) Translates to: DCNFELYCLVPPSHVQISLIPAL*GQMKTD Trigger: ATCTGTCTTCATCTGCCCCCAGAGTGCCGGAATTAA...GGAGATTTGAACATGACTTGGAGGAACGAGACAATATAATTCAAAATTGCAATC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000126429.8 |
||
| 3UTR-3UTR TCA 90 bp | ATGGAGATCTCAAATGCTTTTCACAAAATAAAGAGCCTTGCTGAAGTACAACACCTTTCCCTGAAGTTCTaGATTCTGAGCTTTAATTCC | + |
|
Preference number: 2 (lower is better) Translates to: MEISNAFHKIKSLAEVQHLSLKF*ILSFNS Trigger: GGAATTAAAGCTCAGAATTCAGAACTTCAGGGAAAG...GTGTTGTACTTCAGCAAGGCTCTTTATTTTGTGAAAAGCATTTGAGATCTCCAT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000126429.8 |
||
| 3UTR-3UTR CCA 90 bp | GATTGCAATTTTGAATTATATTGTCTCGTTCCTCCAAGTCATGTTCAAATCTCCTTCTCTTGGGAAATCTaGAATGTTTTCTCAATCTCA | + |
|
Preference number: 2 (lower is better) Translates to: DCNFELYCLVPPSHVQISFSWEI*NVFSIS Trigger: TGAGATTGAGAAAACATTCCAGATTTCCCAAGAGAA...GGAGATTTGAACATGACTTGGAGGAACGAGACAATATAATTCAAAATTGCAATC 34% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000126429.8 |
||
| 3UTR GCA 72 bp | TCCTCGGAGTCCTTCTGGAAGGCCTGCGACAGCTTCTaGAGCTCGCTCTCACACTGGGCGGCACAGGCCTTC | + |
|
Preference number: 3 (lower is better) Translates to: SSESFWKACDSF*SSLSHWAAQAF Trigger: GAAGGCCTGTGCCGCCCAGTGTGAGAGCGAGCTGCAGAAGCTGTCGCAGGCCTTCCAGAAGGACTCCGAGGA 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000125077.9 |
||
| 3UTR CCA 72 bp | AAGGCCTGCGACAGCTTCTGCAGCTCGCTCTCACACTaGGCGGCACAGGCCTTCTCCTTCTCCCAGCAGTGC | + |
|
Preference number: 3 (lower is better) Translates to: KACDSFCSSLSH*AAQAFSFSQQC Trigger: GCACTGCTGGGAGAAGGAGAAGGCCTGTGCCGCCCAGTGTGAGAGCGAGCTGCAGAAGCTGTCGCAGGCCTT 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000125077.9 |
||
| 3UTR GCA 72 bp | CACCTCGAGGCGCAGGGAGCGGCGCTCAACCTCAGCTaGGTGCAGCCTTTGCGTAAACCCAAATATTTGCTT | + |
|
Preference number: 3 (lower is better) Translates to: HLEAQGAALNLS*VQPLRKPKYLL Trigger: AAGCAAATATTTGGGTTTACGCAAAGGCTGCACGCAGCTGAGGTTGAGCGCCGCTCCCTGCGCCTCGAGGTG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000125077.9 |
||
| 3UTR GCA 72 bp | TCGAGGCGCAGGGAGCGGCGCTCAACCTCAGCTGCGTaGAGCCTTTGCGTAAACCCAAATATTTGCTTTTGT | + |
|
Preference number: 3 (lower is better) Translates to: SRRRERRSTSAA*SLCVNPNICFC Trigger: ACAAAAGCAAATATTTGGGTTTACGCAAAGGCTGCACGCAGCTGAGGTTGAGCGCCGCTCCCTGCGCCTCGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000125077.9 |
||
| 3UTR CCA 72 bp | ACGACGGAGAAGCTGGGAGGCTTATCTTTGTCCTTGTaGACGCCTGATGTCCACTGCGCTGACACGCTAAAG | + |
|
Preference number: 3 (lower is better) Translates to: TTEKLGGLSLSL*TPDVHCADTLK Trigger: CTTTAGCGTGTCAGCGCAGTGGACATCAGGCGTCCACAAGGACAAAGATAAGCCTCCCAGCTTCTCCGTCGT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000125077.9 |
||
| 3UTR CCA 72 bp | AGGTCCGCCTCAAAGTCTCAAGGACGACGGAGAAGCTaGGAGGCTTATCTTTGTCCTTGTGGACGCCTGATG | + |
|
Preference number: 3 (lower is better) Translates to: RSASKSQGRRRS*EAYLCPCGRLM Trigger: CATCAGGCGTCCACAAGGACAAAGATAAGCCTCCCAGCTTCTCCGTCGTCCTTGAGACTTTGAGGCGGACCT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000125077.9 |
||
| 3UTR CCA 72 bp | GGGGCGGCAGCTCTTGAAGGCACAGAGAGGTTGGAATaGTCTCGGGATCCCATCGACTGCAAACTTTCATTC | + |
|
Preference number: 3 (lower is better) Translates to: GAAALEGTERLE*SRDPIDCKLSF Trigger: GAATGAAAGTTTGCAGTCGATGGGATCCCGAGACCATTCCAACCTCTCTGTGCCTTCAAGAGCTGCCGCCCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000125077.9 |
||
| 3UTR-3UTR CAA 90 bp | CTGGTAGACATCCATGAAACTTTTAATCATGGCCTGGCATGCCACCACCTCTGGGTCTCCAGGTGCAGTTaGGGTAGCTGCAGGGTGAAG | + |
|
Preference number: 3 (lower is better) Translates to: LVDIHETFNHGLACHHLWVSRCS*GSCRVK Trigger: CTTCACCCTGCAGCTACCCAAACTGCACCTGGAGAC...CCAGAGGTGGTGGCATGCCAGGCCATGATTAAAAGTTTCATGGATGTCTACCAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000125077.9 |
||
| 3UTR TCA 72 bp | CACGCGAGTGCCTGTAAACAGCGTAACTGTTCCCTCTaGTGTTTTGGGAATTGGCGCTTGTCTTTGGGCTCC | + |
|
Preference number: 3 (lower is better) Translates to: HASACKQRNCSL*CFGNWRLSLGS Trigger: GGAGCCCAAAGACAAGCGCCAATTCCCAAAACATCAGAGGGAACAGTTACGCTGTTTACAGGCACTCGCGTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000125077.9 |
||
| 3UTR GCA 72 bp | AGACTCTGTGACTTGTCCAGCTCCTTTTTCATCTCGTaGACGGTCCGTTTGTATTCTGTCACCTCGAGGCGC | + |
|
Preference number: 3 (lower is better) Translates to: RLCDLSSSFFIS*TVRLYSVTSRR Trigger: GCGCCTCGAGGTGACAGAATACAAACGGACCGTGCACGAGATGAAAAAGGAGCTGGACAAGTCACAGAGTCT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000125077.9 |
||
| 3UTR-3UTR CAA 90 bp | CTGATAACCGTACCTAGAAGGTCAGAACTGGTGAGCCACGCGAGTGCCTGTAAACTGGGAGGCTTATCTTaGTCCTTGTGGACGCCTGAT | + |
|
Preference number: 3 (lower is better) Translates to: LITVPRRSELVSHASACKLGGLS*SLWTPD Trigger: ATCAGGCGTCCACAAGGACAAAGATAAGCCTCCCAG...TTTACAGGCACTCGCGTGGCTCACCAGTTCTGACCTTCTAGGTACGGTTATCAG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000125077.9 |
||
| 3UTR-3UTR CAA 90 bp | TCTCAGCTCCATCTTTGCCTCGGAGAGACTCTTAACAGCTTCTCCAAGAGTCTGTTTGGGAATTGGCGCTaGTCTTTGGGCTCCCCGGTA | + |
|
Preference number: 3 (lower is better) Translates to: SQLHLCLGETLNSFSKSLFGNWR*SLGSPV Trigger: TACCGGGGAGCCCAAAGACAAGCGCCAATTCCCAAA...CAGACTCTTGGAGAAGCTGTTAAGAGTCTCTCCGAGGCAAAGATGGAGCTGAGA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000125077.9 |
||
| 3UTR-3UTR CAA 90 bp | AGTTCCAAGCTGTTGACTTGTTCCTGGAGAAAGTCCCTCTGTGTGGATAAGGCATGTTCCGCCACCTTGTaGAAGGTGTCTTCCTGCGTC | + |
|
Preference number: 3 (lower is better) Translates to: SSKLLTCSWRKSLCVDKACSATL*KVSSCV Trigger: GACGCAGGAAGACACCTTCAACAAGGTGGCGGAACA...TGCCTTATCCACACAGAGGGACTTTCTCCAGGAACAAGTCAACAGCTTGGAACT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000125077.9 |
||
| 3UTR-3UTR CAA 90 bp | AGTTCCAAGCTGTTGACTTGTTCCTGGAGAAAGTCCCTCTGTGTGGATAAGGCAGGCTTATCTTTGTCCTaGTGGACGCCTGATGTCCAC | + |
|
Preference number: 3 (lower is better) Translates to: SSKLLTCSWRKSLCVDKAGLSLS*WTPDVH Trigger: GTGGACATCAGGCGTCCACAAGGACAAAGATAAGCC...TGCCTTATCCACACAGAGGGACTTTCTCCAGGAACAAGTCAACAGCTTGGAACT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000125077.9 |
||
| 3UTR TCA 72 bp | TCCGCCACCTTGTTGAAGGTGTCTTCCTGCGTCTGCTaGAGCTCTCTCATCGTATCGGACTTGTTTTTACAG | + |
|
Preference number: 3 (lower is better) Translates to: SATLLKVSSCVC*SSLIVSDLFLQ Trigger: CTGTAAAAACAAGTCCGATACGATGAGAGAGCTTCAGCAGACGCAGGAAGACACCTTCAACAAGGTGGCGGA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000125077.9 |
||
| 3UTR GCA 72 bp | TGTTCCCTCTGCGTCCTGGACAATGTGGTTTTGAAGTaGGAATTCTCACGAACCAGTTGTTCATGGGAGGTC | + |
|
Preference number: 3 (lower is better) Translates to: CSLCVLDNVVLK*EFSRTSCSWEV Trigger: GACCTCCCATGAACAACTGGTTCGTGAGAATTCGCACTTCAAAACCACATTGTCCAGGACGCAGAGGGAACA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000125077.9 |
||
| 3UTR GCA 72 bp | AAAGGCACAGGATTGGCCCAAAAGCTTGAGTCTGTTTaGTGCCAAGATTGCAATCACGCCTTTCCGGAAGAC | + |
|
Preference number: 3 (lower is better) Translates to: KGTGLAQKLESV*CQDCNHAFPED Trigger: GTCTTCCGGAAAGGCGTGATTGCAATCTTGGCAGCAAACAGACTCAAGCTTTTGGGCCAATCCTGTGCCTTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000125077.9 |
||
| 3UTR GCA 72 bp | GCCTCTGAACCAGAGAATCCTTTTCTACATACGTTATaGTCCGGCTGCTATGCAGAGGGATGCTTGCCATTG | + |
|
Preference number: 3 (lower is better) Translates to: ASEPENPFLHTL*SGCYAEGCLPL Trigger: CAATGGCAAGCATCCCTCTGCATAGCAGCCGGAGCATAACGTATGTAGAAAAGGATTCTCTGGTTCAGAGGC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000125077.9 |
||
| 3UTR-3UTR CAA 90 bp | CTGGTAGACATCCATGAAACTTTTAATCATGGCCTGGCATGCCACCACCTCTGGCAACATGCCTTCTGGTaGTTTTATGAGCACACAGCC | + |
|
Preference number: 3 (lower is better) Translates to: LVDIHETFNHGLACHHLWQHAFW*FYEHTA Trigger: GGCTGTGTGCTCATAAAACAACCAGAAGGCATGTTG...CCAGAGGTGGTGGCATGCCAGGCCATGATTAAAAGTTTCATGGATGTCTACCAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000125077.9 |
||
| 3UTR-3UTR CAA 90 bp | TGTGGTTTTGAAGTGCGAATTCTCACGAACCAGTTGTTCATGGGAGGTCTCAATATCTGTTCCGCCACCTaGTTGAAGGTGTCTTCCTGC | + |
|
Preference number: 3 (lower is better) Translates to: CGFEVRILTNQLFMGGLNICSAT*LKVSSC Trigger: GCAGGAAGACACCTTCAACAAGGTGGCGGAACAGAT...ATTGAGACCTCCCATGAACAACTGGTTCGTGAGAATTCGCACTTCAAAACCACA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000125077.9 |
||
| 3UTR-3UTR CAA 90 bp | GCCTATGCCTTCTTTACAACTCTCCATCCAGGTGAAAAGAAAGGCACAGGATTGTGTTTGCTGCCAAGATaGCAATCACGCCTTTCCGGA | + |
|
Preference number: 3 (lower is better) Translates to: AYAFFTTLHPGEKKGTGLCLLPR*QSRLSG Trigger: TCCGGAAAGGCGTGATTGCAATCTTGGCAGCAAACA...CAATCCTGTGCCTTTCTTTTCACCTGGATGGAGAGTTGTAAAGAAGGCATAGGC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000125077.9 |
||
| 3UTR GCA 72 bp | CAACATGCCTTCTGGTTGTTTTATGAGCACACAGCCTaGTACCAAGTGCTGATACAAGGTGTGAAGGAAGGT | + |
|
Preference number: 3 (lower is better) Translates to: QHAFWLFYEHTA*YQVLIQGVKEG Trigger: ACCTTCCTTCACACCTTGTATCAGCACTTGGTAGCAGGCTGTGTGCTCATAAAACAACCAGAAGGCATGTTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000125077.9 |
||
| 3UTR GCA 72 bp | CAGATGGCTTATCTTCTCATTAGCCCTGTTAAGGTCTaGAATGAGGGCATCAACATTCTCCTGCAAGACTGC | + |
|
Preference number: 3 (lower is better) Translates to: QMAYLLISPVKV*NEGINILLQDC Trigger: GCAGTCTTGCAGGAGAATGTTGATGCCCTCATTGCAGACCTTAACAGGGCTAATGAGAAGATAAGCCATCTG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000125077.9 |
||
| 3UTR GCA 72 bp | AGCTGCTGGGCCTGTTCATTCAGCAACATTTGTGCCTaGTGTTCCCGAAGCAATGCGTTATTTAGTTCTTCA | + |
|
Preference number: 3 (lower is better) Translates to: SCWACSFSNICA*CSRSNALFSSS Trigger: TGAAGAACTAAATAACGCATTGCTTCGGGAACAGCAGGCACAAATGTTGCTGAATGAACAGGCCCAGCAGCT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000125077.9 |
||
| 3UTR GCA 72 bp | ACAGAGAGGTTGGAATGGTCTCGGGATCCCATCGACTaGAAACTTTCATTCTCTCTTAGACAAGCTGTATGG | + |
|
Preference number: 3 (lower is better) Translates to: TERLEWSRDPID*KLSFSLRQAVW Trigger: CCATACAGCTTGTCTAAGAGAGAATGAAAGTTTGCAGTCGATGGGATCCCGAGACCATTCCAACCTCTCTGT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000125077.9 |
||
| 3UTR CCA 72 bp | TCTTCTTGTTTCTTCTCATCTACCGCTGACAACGCCTaGGCCAGGGTTCTAATTTCCAGTTTGAACAGTTCC | + |
|
Preference number: 3 (lower is better) Translates to: SSCFFSSTADNA*ARVLISSLNSS Trigger: GGAACTGTTCAAACTGGAAATTAGAACCCTGGCCCAGGCGTTGTCAGCGGTAGATGAGAAGAAACAAGAAGA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000125077.9 |
||
| 3UTR CCA 72 bp | CTTCTCCAAGAGTCTGGTTTTTGTCAGCTTCCTCGCTaGAGTGCAATTCAAGTCTATAGTTCAGCTCCTGCA | + |
|
Preference number: 3 (lower is better) Translates to: LLQESGFCQLPR*SAIQVYSSAPA Trigger: TGCAGGAGCTGAACTATAGACTTGAATTGCACTCCAGCGAGGAAGCTGACAAAAACCAGACTCTTGGAGAAG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000125077.9 |
||
| 3UTR-3UTR CAA 90 bp | ATGACTTCTTGCAGCTCTGTCATAGAACTGATAACCGTACCTAGAAGGTCAGAACTGATGTTTTGGGAATaGGCGCTTGTCTTTGGGCTC | + |
|
Preference number: 3 (lower is better) Translates to: MTSCSSVIELITVPRRSELMFWE*ALVFGL Trigger: GAGCCCAAAGACAAGCGCCAATTCCCAAAACATCAG...TTCTGACCTTCTAGGTACGGTTATCAGTTCTATGACAGAGCTGCAAGAAGTCAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000125077.9 |
||
| 3UTR TCA 72 bp | CAAGCTGTATGGAGCTCAGACTTGAGAGTTGCTATATaGCTTCGGTGCGATGTCATTTCCTTCTCTAAGGTA | + |
|
Preference number: 3 (lower is better) Translates to: QAVWSSDLRVAI*LRCDVISFSKV Trigger: TACCTTAGAGAAGGAAATGACATCGCACCGAAGTCATATAGCAACTCTCAAGTCTGAGCTCCATACAGCTTG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000125077.9 |
||
| 3UTR TCA 72 bp | TGTTTTCTCAATCTCATTTGCCTTTCCCTGAAGTTCTaGATTCTGAGCTTTAATTCCGGCACTCTGGGGGCA | + |
|
Preference number: 3 (lower is better) Translates to: CFLNLICLSLKF*ILSFNSGTLGA Trigger: TGCCCCCAGAGTGCCGGAATTAAAGCTCAGAATTCAGAACTTCAGGGAAAGGCAAATGAGATTGAGAAAACA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000126429.8 |
||
| 3UTR GCA 72 bp | CTGTTAAGGTCTGCAATGAGGGCATCAACATTCTCCTaGAAGACTGCACAAAGCTCAGACCAAGAGAATTTA | + |
|
Preference number: 3 (lower is better) Translates to: LLRSAMRASTFS*KTAQSSDQENL Trigger: TAAATTCTCTTGGTCTGAGCTTTGTGCAGTCTTGCAGGAGAATGTTGATGCCCTCATTGCAGACCTTAACAG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000125077.9 |
||
| 3UTR-3UTR CAA 90 bp | AAAAGCTTGAGTCTGTTTGCTGCCAAGATTGCAATCACGCCTTTCCGGAAGACACTCATCGTATCGGACTaGTTTTTACAGATATACTCC | + |
|
Preference number: 3 (lower is better) Translates to: KSLSLFAAKIAITPFRKTLIVSD*FLQIYS Trigger: GGAGTATATCTGTAAAAACAAGTCCGATACGATGAG...TGTCTTCCGGAAAGGCGTGATTGCAATCTTGGCAGCAAACAGACTCAAGCTTTT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000125077.9 |
||
| 3UTR TCA 72 bp | CATTCTCTCTTAGACAAGCTGTATGGAGCTCAGACTTaGGAGTTGCTATATGACTTCGGTGCGATGTCATTT | + |
|
Preference number: 3 (lower is better) Translates to: HSLLDKLYGAQT*ELLYDFGAMSF Trigger: AAATGACATCGCACCGAAGTCATATAGCAACTCTCAAGTCTGAGCTCCATACAGCTTGTCTAAGAGAGAATG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000125077.9 |
||
| 3UTR CCA 72 bp | GTTTTGAAGTGCGAATTCTCACGAACCAGTTGTTCATaGGAGGTCTCAATGCGGTTCAATTTTTCTGAGTTT | + |
|
Preference number: 3 (lower is better) Translates to: VLKCEFSRTSCS*EVSMRFNFSEF Trigger: AAACTCAGAAAAATTGAACCGCATTGAGACCTCCCATGAACAACTGGTTCGTGAGAATTCGCACTTCAAAAC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000125077.9 |
||
| 3UTR TCA 72 bp | CAAATATTTGCTTTTGTAACGCTGCAGTGCTTTTCATaGTGGGAATATGGCTGCATAAACCATACTTCAGGG | + |
|
Preference number: 3 (lower is better) Translates to: QIFAFVTLQCFS*WEYGCINHTSG Trigger: CCCTGAAGTATGGTTTATGCAGCCATATTCCCATCATGAAAAGCACTGCAGCGTTACAAAAGCAAATATTTG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000125077.9 |
||
| 3UTR TCA 72 bp | CCATTAGTTTTGCAAAAGAATTCTTGGCTGCACCTATaGGTAAATGTCCACAAATCCTGGAATTTGGATCTG | + |
|
Preference number: 3 (lower is better) Translates to: PLVLQKNSWLHL*VNVHKSWNLDL Trigger: CAGATCCAAATTCCAGGATTTGTGGACATTTACTCATAGGTGCAGCCAAGAATTCTTTTGCAAAACTAATGG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000125077.9 |
||
| 3UTR GCA 72 bp | ATCCTGGAATTTGGATCTGTTTTACTAATGACTTCTTaGAGCTCTGTCATAGAACTGATAACCGTACCTAGA | + |
|
Preference number: 3 (lower is better) Translates to: ILEFGSVLLMTS*SSVIELITVPR Trigger: TCTAGGTACGGTTATCAGTTCTATGACAGAGCTGCAAGAAGTCATTAGTAAAACAGATCCAAATTCCAGGAT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000125077.9 |
||
| 3UTR-3UTR CAA 90 bp | ATGGAGATCTCAAATGCTTTTCACAAAATAAAGAGCCTTGCTGAAGTACAACACTTTTCTCAATCTCATTaGCCTTTCCCTGAAGTTCTG | + |
|
Preference number: 3 (lower is better) Translates to: MEISNAFHKIKSLAEVQHFSQSH*PFPEVL Trigger: CAGAACTTCAGGGAAAGGCAAATGAGATTGAGAAAA...GTGTTGTACTTCAGCAAGGCTCTTTATTTTGTGAAAAGCATTTGAGATCTCCAT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000126429.8 |
||
| 3UTR CAA 72 bp | TTGTCCAGCTCCTTTTTCATCTCGTGCACGGTCCGTTaGTATTCTGTCACCTCGAGGCGCAGGGAGCGGCGC | + |
|
Preference number: 4 (lower is better) Translates to: LSSSFFISCTVR*YSVTSRRRERR Trigger: GCGCCGCTCCCTGCGCCTCGAGGTGACAGAATACAAACGGACCGTGCACGAGATGAAAAAGGAGCTGGACAA 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000125077.9 |
||
| 3UTR CAA 72 bp | AGGACGACGGAGAAGCTGGGAGGCTTATCTTTGTCCTaGTGGACGCCTGATGTCCACTGCGCTGACACGCTA | + |
|
Preference number: 4 (lower is better) Translates to: RTTEKLGGLSLS*WTPDVHCADTL Trigger: TAGCGTGTCAGCGCAGTGGACATCAGGCGTCCACAAGGACAAAGATAAGCCTCCCAGCTTCTCCGTCGTCCT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000125077.9 |
||
| CDS-3UTR CCA 90 bp | GCTGGAGTGCAATTCAAGTCTATAGTTCAGCTCCTGCAGCTGCTGGGCCTGTTCCCTCAGACCGCAGCCTaGCAATCTGGCTCTCATAGC | + |
|
Preference number: 4 (lower is better) Translates to: AGVQFKSIVQLLQLLGLFPQTAA*QSGSHS Trigger: GCTATGAGAGCCAGATTGCCAGGCTGCGGTCTGAGG...GAACAGGCCCAGCAGCTGCAGGAGCTGAACTATAGACTTGAATTGCACTCCAGC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000125077.9 |
||
| 3UTR CAA 72 bp | TGGAGCCCCTCCATTGCAAAGGTCTCCAGGTGCAGTTaGGGTAGCTGCAGGGTGAAGTCATTCCTAGTTGCT | + |
|
Preference number: 4 (lower is better) Translates to: WSPSIAKVSRCS*GSCRVKSFLVA Trigger: AGCAACTAGGAATGACTTCACCCTGCAGCTACCCAAACTGCACCTGGAGACCTTTGCAATGGAGGGGCTCCA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000125077.9 |
||
| CDS-3UTR TCA 90 bp | CTGGTAGACATCCATGAAACTTTTAATCATGGCCTGGCATGCCACCACCTCTGGAGGCGTTCCTCCCTTTaGGTGCTAAACTCAAGCTCG | + |
|
Preference number: 4 (lower is better) Translates to: LVDIHETFNHGLACHHLWRRSSL*VLNSSS Trigger: CGAGCTTGAGTTTAGCACTCAAAGGGAGGAACGCCT...CCAGAGGTGGTGGCATGCCAGGCCATGATTAAAAGTTTCATGGATGTCTACCAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000125077.9 |
||
| CDS-3UTR CCA 90 bp | CACAGCCTGCTACCAAGTGCTGATACAAGGTGTGAAGGAAGGTTAGCTTCTCCTGCCACAGCCTCTGCCTaGCTGGCTTTTTCTACTTGT | + |
|
Preference number: 4 (lower is better) Translates to: HSLLPSADTRCEGRLASPATASA*LAFSTC Trigger: ACAAGTAGAAAAAGCCAGCCAGGCAGAGGCTGTGGC...AGGAGAAGCTAACCTTCCTTCACACCTTGTATCAGCACTTGGTAGCAGGCTGTG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000125077.9 |
||
| 3UTR CAA 72 bp | GCTGACAACGCCTGGGCCAGGGTTCTAATTTCCAGTTaGAACAGTTCCAAGCTGTTGACTTGTTCCTGGAGA | + |
|
Preference number: 4 (lower is better) Translates to: ADNAWARVLISS*NSSKLLTCSWR Trigger: TCTCCAGGAACAAGTCAACAGCTTGGAACTGTTCAAACTGGAAATTAGAACCCTGGCCCAGGCGTTGTCAGC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000125077.9 |
||
| CDS-3UTR TCA 90 bp | AAAAGCTTGAGTCTGTTTGCTGCCAAGATTGCAATCACGCCTTTCCGGAAGACACTTTCCCTGAAGTTCTaGATTCTGAGCGCAGAGCCT | + |
|
Preference number: 4 (lower is better) Translates to: KSLSLFAAKIAITPFRKTLSLKF*ILSAEP Trigger: AGGCTCTGCGCTCAGAATTCAGAACTTCAGGGAAAG...TGTCTTCCGGAAAGGCGTGATTGCAATCTTGGCAGCAAACAGACTCAAGCTTTT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000125077.9 |
||
| CDS-3UTR TCA 90 bp | TCAGCAACATTTGTGCCTGCTGTTCCCGAAGCAATGCGTTATTTAGTTCTTCACCTGGCTCTCATAGCTTaGCAGCTCTGCATTGTGCTT | + |
|
Preference number: 4 (lower is better) Translates to: SATFVPAVPEAMRYLVLHLALIA*QLCIVL Trigger: AAGCACAATGCAGAGCTGTCAAGCTATGAGAGCCAG...GTGAAGAACTAAATAACGCATTGCTTCGGGAACAGCAGGCACAAATGTTGCTGA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000125077.9 |
||
| CDS-3UTR TCA 90 bp | CTGCACACATTGGGATATCACACCATTACCTTACTTGTAATTAAACAAAACTCAAGCGTGTTCACTTTGTaGAGCCCCCGGGCCAGCCTC | + |
|
Preference number: 4 (lower is better) Translates to: LHTLGYHTITLLVIKQNSSVFTL*SPRASL Trigger: GAGGCTGGCCCGGGGGCTTCACAAAGTGAACACGCT...TGAGTTTTGTTTAATTACAAGTAAGGTAATGGTGTGATATCCCAATGTGTGCAG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000053414.13 ENSMUST00000231339.2 |
||
| CDS-3UTR GCA 90 bp | TGTGGTTTTGAAGTGCGAATTCTCACGAACCAGTTGTTCATGGGAGGTCTCAATGTCTTCTCTTGTTCGTaGTTCTCCAGGATCTCCTGT | + |
|
Preference number: 4 (lower is better) Translates to: CGFEVRILTNQLFMGGLNVFSCS*FSRISC Trigger: ACAGGAGATCCTGGAGAAGCACGAACAAGAGAAGAC...ATTGAGACCTCCCATGAACAACTGGTTCGTGAGAATTCGCACTTCAAAACCACA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000125077.9 |
||
| CDS-3UTR GCA 90 bp | ATGACTTCTTGCAGCTCTGTCATAGAACTGATAACCGTACCTAGAAGGTCAGAACACCCTCAGAGTGGTTaGCTCAAACTCTTTCCTCAG | + |
|
Preference number: 4 (lower is better) Translates to: MTSCSSVIELITVPRRSEHPQSG*LKLFPQ Trigger: CTGAGGAAAGAGTTTGAGGCAACCACTCTGAGGGTG...TTCTGACCTTCTAGGTACGGTTATCAGTTCTATGACAGAGCTGCAAGAAGTCAT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000125077.9 |
||
| CDS-3UTR CCA 90 bp | ATGACTTCTTGCAGCTCTGTCATAGAACTGATAACCGTACCTAGAAGGTCAGAATCCTCACCCTCAGAGTaGTTGCCTCAAACTCTTTCC | + |
|
Preference number: 4 (lower is better) Translates to: MTSCSSVIELITVPRRSESSPSE*LPQTLS Trigger: GGAAAGAGTTTGAGGCAACCACTCTGAGGGTGAGGA...TTCTGACCTTCTAGGTACGGTTATCAGTTCTATGACAGAGCTGCAAGAAGTCAT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000125077.9 |
||
| CDS-3UTR CCA 90 bp | CTGCACACATTGGGATATCACACCATTACCTTACTTGTAATTAAACAAAACTCATGCCAGCAGCTCTCCTaGGCCTTGATCTGTTCCGCC | + |
|
Preference number: 4 (lower is better) Translates to: LHTLGYHTITLLVIKQNSCQQLS*ALICSA Trigger: GGCGGAACAGATCAAGGCCCAGGAGAGCTGCTGGCA...TGAGTTTTGTTTAATTACAAGTAAGGTAATGGTGTGATATCCCAATGTGTGCAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000053414.13 ENSMUST00000231339.2 |
||
| CDS-3UTR CCA 90 bp | CTGCACACATTGGGATATCACACCATTACCTTACTTGTAATTAAACAAAACTCAACCTCTGGCCCACCCTaGAGCCCCTCCATTGCAAAG | + |
|
Preference number: 4 (lower is better) Translates to: LHTLGYHTITLLVIKQNSTSGPP*SPSIAK Trigger: CTTTGCAATGGAGGGGCTCCAGGGTGGGCCAGAGGT...TGAGTTTTGTTTAATTACAAGTAAGGTAATGGTGTGATATCCCAATGTGTGCAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000053414.13 ENSMUST00000231339.2 |
||
| 3UTR CAA 72 bp | CTCAGACCAAGAGAATTTATCCAACATGCCTTCTGGTaGTTTTATGAGCACACAGCCTGCTACCAAGTGCTG | + |
|
Preference number: 4 (lower is better) Translates to: LRPREFIQHAFW*FYEHTACYQVL Trigger: CAGCACTTGGTAGCAGGCTGTGTGCTCATAAAACAACCAGAAGGCATGTTGGATAAATTCTCTTGGTCTGAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000125077.9 |
||
| CDS-3UTR TCA 90 bp | CTGCACACATTGGGATATCACACCATTACCTTACTTGTAATTAAACAAAACTCAAGCTCTCCTGGGCCTTaGTCTGTTCCGCCACCTTGT | + |
|
Preference number: 4 (lower is better) Translates to: LHTLGYHTITLLVIKQNSSSPGP*SVPPPC Trigger: ACAAGGTGGCGGAACAGATCAAGGCCCAGGAGAGCT...TGAGTTTTGTTTAATTACAAGTAAGGTAATGGTGTGATATCCCAATGTGTGCAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000053414.13 ENSMUST00000231339.2 |
||
| CDS-3UTR TCA 90 bp | CTGCACACATTGGGATATCACACCATTACCTTACTTGTAATTAAACAAAACTCACCCCGGGCCAGCCTCTaGACCAGAGAATCCTTTTCT | + |
|
Preference number: 4 (lower is better) Translates to: LHTLGYHTITLLVIKQNSPRASL*TRESFS Trigger: AGAAAAGGATTCTCTGGTTCAGAGGCTGGCCCGGGG...TGAGTTTTGTTTAATTACAAGTAAGGTAATGGTGTGATATCCCAATGTGTGCAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000053414.13 ENSMUST00000231339.2 |
||
| CDS-3UTR TCA 90 bp | CTGCACACATTGGGATATCACACCATTACCTTACTTGTAATTAAACAAAACTCAACCCCTGGAGAGGACTaGGATGACAGAGAATGGGGG | + |
|
Preference number: 4 (lower is better) Translates to: LHTLGYHTITLLVIKQNSTPGED*DDREWG Trigger: CCCCCATTCTCTGTCATCTCAGTCCTCTCCAGGGGT...TGAGTTTTGTTTAATTACAAGTAAGGTAATGGTGTGATATCCCAATGTGTGCAG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000053414.13 ENSMUST00000231339.2 |
||
| CDS-3UTR GCA 90 bp | CTGCACACATTGGGATATCACACCATTACCTTACTTGTAATTAAACAAAACTCATCCTTCTTCTGCTTCTaGCAGCAGCTCTCCTGGGCC | + |
|
Preference number: 4 (lower is better) Translates to: LHTLGYHTITLLVIKQNSSFFCF*QQLSWA Trigger: GGCCCAGGAGAGCTGCTGGCAGAAGCAGAAGAAGGA...TGAGTTTTGTTTAATTACAAGTAAGGTAATGGTGTGATATCCCAATGTGTGCAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000053414.13 ENSMUST00000231339.2 |
||
| CDS-3UTR GCA 90 bp | CTGCACACATTGGGATATCACACCATTACCTTACTTGTAATTAAACAAAACTCAGCGGAGGGCACTCTCTaGATCACGGATGTTCTCCTC | + |
|
Preference number: 4 (lower is better) Translates to: LHTLGYHTITLLVIKQNSAEGTL*ITDVLL Trigger: GAGGAGAACATCCGTGATGCAGAGAGTGCCCTCCGC...TGAGTTTTGTTTAATTACAAGTAAGGTAATGGTGTGATATCCCAATGTGTGCAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000053414.13 ENSMUST00000231339.2 |
||
| CDS-3UTR GCA 90 bp | CTGCACACATTGGGATATCACACCATTACCTTACTTGTAATTAAACAAAACTCACTGGAGCCCCTCCATTaGAAAGGTCTCCAGGTGCAG | + |
|
Preference number: 4 (lower is better) Translates to: LHTLGYHTITLLVIKQNSLEPLH*KGLQVQ Trigger: CTGCACCTGGAGACCTTTGCAATGGAGGGGCTCCAG...TGAGTTTTGTTTAATTACAAGTAAGGTAATGGTGTGATATCCCAATGTGTGCAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000053414.13 ENSMUST00000231339.2 |
||
| CDS-3UTR CCA 90 bp | CTGCACACATTGGGATATCACACCATTACCTTACTTGTAATTAAACAAAACTCACCTCAGACCGCAGCCTaGCAATCTGGCTCTCATAGC | + |
|
Preference number: 4 (lower is better) Translates to: LHTLGYHTITLLVIKQNSPQTAA*QSGSHS Trigger: GCTATGAGAGCCAGATTGCCAGGCTGCGGTCTGAGG...TGAGTTTTGTTTAATTACAAGTAAGGTAATGGTGTGATATCCCAATGTGTGCAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000053414.13 ENSMUST00000125077.9 ENSMUST00000231339.2 |
||
| CDS-3UTR CCA 90 bp | GATTGCAATTTTGAATTATATTGTCTCGTTCCTCCAAGTCATGTTCAAATCTCCCCTCAGACCGCAGCCTaGCAATCTGGCTCTCATAGC | + |
|
Preference number: 4 (lower is better) Translates to: DCNFELYCLVPPSHVQISPQTAA*QSGSHS Trigger: GCTATGAGAGCCAGATTGCCAGGCTGCGGTCTGAGG...GGAGATTTGAACATGACTTGGAGGAACGAGACAATATAATTCAAAATTGCAATC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000126429.8 |
||
| 3UTR CAA 72 bp | CTGTGTTCACGAACGTCTCCTTTAAGAAAGTGTAAGTaGTATCGAGTTCTGCTTGCAATGGAAGCAAGTCCC | + |
|
Preference number: 4 (lower is better) Translates to: LCSRTSPLRKCK*YRVLLAMEASP Trigger: GGGACTTGCTTCCATTGCAAGCAGAACTCGATACAACTTACACTTTCTTAAAGGAGACGTTCGTGAACACAG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000125077.9 |
||
| CDS-3UTR TCA 90 bp | CTGCACACATTGGGATATCACACCATTACCTTACTTGTAATTAAACAAAACTCAGTTCCGCCACCTTGTTaGAGGTGTCTTCCTGCGTCT | + |
|
Preference number: 4 (lower is better) Translates to: LHTLGYHTITLLVIKQNSVPPPC*RCLPAS Trigger: AGACGCAGGAAGACACCTTCAACAAGGTGGCGGAAC...TGAGTTTTGTTTAATTACAAGTAAGGTAATGGTGTGATATCCCAATGTGTGCAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000053414.13 ENSMUST00000231339.2 |
||
| CDS-3UTR GCA 90 bp | CTGCACACATTGGGATATCACACCATTACCTTACTTGTAATTAAACAAAACTCAACGCCTGATGTCCACTaGGCTGACACGCTAAAGCTG | + |
|
Preference number: 4 (lower is better) Translates to: LHTLGYHTITLLVIKQNSTPDVH*ADTLKL Trigger: CAGCTTTAGCGTGTCAGCGCAGTGGACATCAGGCGT...TGAGTTTTGTTTAATTACAAGTAAGGTAATGGTGTGATATCCCAATGTGTGCAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000053414.13 ENSMUST00000231339.2 |
||
| CDS-3UTR GCA 90 bp | CTGCACACATTGGGATATCACACCATTACCTTACTTGTAATTAAACAAAACTCATCCAGCTCCTTCTTCTaGTTCTGCCAGCAGCTCTCC | + |
|
Preference number: 4 (lower is better) Translates to: LHTLGYHTITLLVIKQNSSSSFF*FCQQLS Trigger: GGAGAGCTGCTGGCAGAAGCAGAAGAAGGAGCTGGA...TGAGTTTTGTTTAATTACAAGTAAGGTAATGGTGTGATATCCCAATGTGTGCAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000053414.13 ENSMUST00000231339.2 |
||
| CDS-3UTR GCA 90 bp | CTGCACACATTGGGATATCACACCATTACCTTACTTGTAATTAAACAAAACTCATTCAGCTCCTGCAGCTaGTGGGCCTGTTCATTCAGC | + |
|
Preference number: 4 (lower is better) Translates to: LHTLGYHTITLLVIKQNSFSSCS*WACSFS Trigger: GCTGAATGAACAGGCCCAGCAGCTGCAGGAGCTGAA...TGAGTTTTGTTTAATTACAAGTAAGGTAATGGTGTGATATCCCAATGTGTGCAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000053414.13 ENSMUST00000231339.2 |
||
| CDS-3UTR GCA 90 bp | CTGCACACATTGGGATATCACACCATTACCTTACTTGTAATTAAACAAAACTCATGTCTTTGGCTGCCATaGGGAGGGCACTCTCTGCAT | + |
|
Preference number: 4 (lower is better) Translates to: LHTLGYHTITLLVIKQNSCLWLP*GGHSLH Trigger: ATGCAGAGAGTGCCCTCCGCATGGCAGCCAAAGACA...TGAGTTTTGTTTAATTACAAGTAAGGTAATGGTGTGATATCCCAATGTGTGCAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000053414.13 ENSMUST00000231339.2 |
||
| CDS-3UTR CCA 90 bp | TCTCAATCTTTTGTTTGGTGGAATCGAGTTCGTTGGATGTCTTTTCCTTGGCATCAGCCTCTGCCTGGCTaGCTTTTTCTACTTGTAAAG | + |
|
Preference number: 4 (lower is better) Translates to: SQSFVWWNRVRWMSFPWHQPLPG*LFLLVK Trigger: CTTTACAAGTAGAAAAAGCCAGCCAGGCAGAGGCTG...ATGCCAAGGAAAAGACATCCAACGAACTCGATTCCACCAAACAAAAGATTGAGA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000125077.9 |
||
| CDS-3UTR CCA 90 bp | CTGCACACATTGGGATATCACACCATTACCTTACTTGTAATTAAACAAAACTCAACCGCTGACAACGCCTaGGCCAGGGTTCTAATTTCC | + |
|
Preference number: 4 (lower is better) Translates to: LHTLGYHTITLLVIKQNSTADNA*ARVLIS Trigger: GGAAATTAGAACCCTGGCCCAGGCGTTGTCAGCGGT...TGAGTTTTGTTTAATTACAAGTAAGGTAATGGTGTGATATCCCAATGTGTGCAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000053414.13 ENSMUST00000231339.2 |
||
| CDS-3UTR CCA 90 bp | CTGCACACATTGGGATATCACACCATTACCTTACTTGTAATTAAACAAAACTCAAGCTCCTGCAGCTGCTaGGCCTGTTCATTCAGCAAC | + |
|
Preference number: 4 (lower is better) Translates to: LHTLGYHTITLLVIKQNSSSCSC*ACSFSN Trigger: GTTGCTGAATGAACAGGCCCAGCAGCTGCAGGAGCT...TGAGTTTTGTTTAATTACAAGTAAGGTAATGGTGTGATATCCCAATGTGTGCAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000053414.13 ENSMUST00000231339.2 |
||
| 3UTR CAA 72 bp | CAATGTGGTTTTGAAGTGCGAATTCTCACGAACCAGTaGTTCATGGGAGGTCTCAATGCGGTTCAATTTTTC | + |
|
Preference number: 4 (lower is better) Translates to: QCGFEVRILTNQ*FMGGLNAVQFF Trigger: GAAAAATTGAACCGCATTGAGACCTCCCATGAACAACTGGTTCGTGAGAATTCGCACTTCAAAACCACATTG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000125077.9 |
||
| 3UTR CAA 72 bp | TTGAATTCATTTAATTGTGTTTGCAGACTCTGTGACTaGTCCAGCTCCTTTTTCATCTCGTGCACGGTCCGT | + |
|
Preference number: 4 (lower is better) Translates to: LNSFNCVCRLCD*SSSFFISCTVR Trigger: ACGGACCGTGCACGAGATGAAAAAGGAGCTGGACAAGTCACAGAGTCTGCAAACACAATTAAATGAATTCAA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000125077.9 |
||
| CDS-3UTR TCA 90 bp | ATGGAGATCTCAAATGCTTTTCACAAAATAAAGAGCCTTGCTGAAGTACAACACCTGGCTCTCATAGCTTaGCAGCTCTGCATTGTGCTT | + |
|
Preference number: 4 (lower is better) Translates to: MEISNAFHKIKSLAEVQHLALIA*QLCIVL Trigger: AAGCACAATGCAGAGCTGTCAAGCTATGAGAGCCAG...GTGTTGTACTTCAGCAAGGCTCTTTATTTTGTGAAAAGCATTTGAGATCTCCAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000126429.8 |
||
| CDS-3UTR TCA 90 bp | CTGCACACATTGGGATATCACACCATTACCTTACTTGTAATTAAACAAAACTCAAGGCGTTCCTCCCTTTaGGTGCTAAACTCAAGCTCG | + |
|
Preference number: 4 (lower is better) Translates to: LHTLGYHTITLLVIKQNSRRSSL*VLNSSS Trigger: CGAGCTTGAGTTTAGCACTCAAAGGGAGGAACGCCT...TGAGTTTTGTTTAATTACAAGTAAGGTAATGGTGTGATATCCCAATGTGTGCAG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000053414.13 ENSMUST00000125077.9 ENSMUST00000231339.2 |
||
| CDS-3UTR TCA 90 bp | CTGCACACATTGGGATATCACACCATTACCTTACTTGTAATTAAACAAAACTCATCTTCCTGCGTCTGCTaGAGCTCTCTCATCGTATCG | + |
|
Preference number: 4 (lower is better) Translates to: LHTLGYHTITLLVIKQNSSSCVC*SSLIVS Trigger: CGATACGATGAGAGAGCTTCAGCAGACGCAGGAAGA...TGAGTTTTGTTTAATTACAAGTAAGGTAATGGTGTGATATCCCAATGTGTGCAG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000053414.13 ENSMUST00000231339.2 |
||
| CDS-3UTR GCA 90 bp | ATGACTTCTTGCAGCTCTGTCATAGAACTGATAACCGTACCTAGAAGGTCAGAACTTCTCTCGCTCATATaGACTCTCAACCTCTTTGAA | + |
|
Preference number: 4 (lower is better) Translates to: MTSCSSVIELITVPRRSELLSLI*TLNLFE Trigger: TTCAAAGAGGTTGAGAGTGCATATGAGCGAGAGAAG...TTCTGACCTTCTAGGTACGGTTATCAGTTCTATGACAGAGCTGCAAGAAGTCAT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000125077.9 |
||
| CDS-3UTR GCA 90 bp | CTGCACACATTGGGATATCACACCATTACCTTACTTGTAATTAAACAAAACTCATTCTGTGCCCTCCTCTaGACCTCCAGGAGAAGTTCA | + |
|
Preference number: 4 (lower is better) Translates to: LHTLGYHTITLLVIKQNSFCALL*TSRRSS Trigger: TGAACTTCTCCTGGAGGTGCAGAGGAGGGCACAGAA...TGAGTTTTGTTTAATTACAAGTAAGGTAATGGTGTGATATCCCAATGTGTGCAG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000053414.13 ENSMUST00000231339.2 |
||
| CDS-3UTR GCA 90 bp | CTGCACACATTGGGATATCACACCATTACCTTACTTGTAATTAAACAAAACTCACACGTCTGTTCCCTCTaGGTCCTGGACAATGTGGTT | + |
|
Preference number: 4 (lower is better) Translates to: LHTLGYHTITLLVIKQNSHVCSL*VLDNVV Trigger: AACCACATTGTCCAGGACGCAGAGGGAACAGACGTG...TGAGTTTTGTTTAATTACAAGTAAGGTAATGGTGTGATATCCCAATGTGTGCAG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000053414.13 ENSMUST00000231339.2 |
||
| CDS-3UTR GCA 90 bp | CTGCACACATTGGGATATCACACCATTACCTTACTTGTAATTAAACAAAACTCAATGCTCCGGCTGCTATaGAGAGGGATGCTTGCCATT | + |
|
Preference number: 4 (lower is better) Translates to: LHTLGYHTITLLVIKQNSMLRLL*RGMLAI Trigger: AATGGCAAGCATCCCTCTGCATAGCAGCCGGAGCAT...TGAGTTTTGTTTAATTACAAGTAAGGTAATGGTGTGATATCCCAATGTGTGCAG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000053414.13 ENSMUST00000231339.2 |
||
| CDS-3UTR GCA 90 bp | CTGCACACATTGGGATATCACACCATTACCTTACTTGTAATTAAACAAAACTCATCAACCTCAGCTGCGTaGAGCCTTTGCGTAAACCCA | + |
|
Preference number: 4 (lower is better) Translates to: LHTLGYHTITLLVIKQNSSTSAA*SLCVNP Trigger: TGGGTTTACGCAAAGGCTGCACGCAGCTGAGGTTGA...TGAGTTTTGTTTAATTACAAGTAAGGTAATGGTGTGATATCCCAATGTGTGCAG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000053414.13 ENSMUST00000231339.2 |
||
| CDS-3UTR GCA 90 bp | CTGCACACATTGGGATATCACACCATTACCTTACTTGTAATTAAACAAAACTCAAGTCGACGCTTGTCCTaGTCCAGCTGGGTAAGATGT | + |
|
Preference number: 4 (lower is better) Translates to: LHTLGYHTITLLVIKQNSSRRLS*SSWVRC Trigger: ACATCTTACCCAGCTGGAGCAGGACAAGCGTCGACT...TGAGTTTTGTTTAATTACAAGTAAGGTAATGGTGTGATATCCCAATGTGTGCAG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000053414.13 ENSMUST00000231339.2 |
||
| CDS-3UTR GCA 90 bp | CTGCACACATTGGGATATCACACCATTACCTTACTTGTAATTAAACAAAACTCATTCTTTGTCTTTGGCTaGCATGCGGAGGGCACTCTC | + |
|
Preference number: 4 (lower is better) Translates to: LHTLGYHTITLLVIKQNSFFVFG*HAEGTL Trigger: GAGAGTGCCCTCCGCATGGCAGCCAAAGACAAAGAA...TGAGTTTTGTTTAATTACAAGTAAGGTAATGGTGTGATATCCCAATGTGTGCAG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000053414.13 ENSMUST00000231339.2 |
||
| CDS-3UTR CCA 90 bp | CTGCACACATTGGGATATCACACCATTACCTTACTTGTAATTAAACAAAACTCAGCCACAGCCTCTGCCTaGCTGGCTTTTTCTACTTGT | + |
|
Preference number: 4 (lower is better) Translates to: LHTLGYHTITLLVIKQNSATASA*LAFSTC Trigger: ACAAGTAGAAAAAGCCAGCCAGGCAGAGGCTGTGGC...TGAGTTTTGTTTAATTACAAGTAAGGTAATGGTGTGATATCCCAATGTGTGCAG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000053414.13 ENSMUST00000125077.9 ENSMUST00000231339.2 |
||
| CDS-3UTR CCA 90 bp | CTGCACACATTGGGATATCACACCATTACCTTACTTGTAATTAAACAAAACTCAGGACGACGGAGAAGCTaGGAGGCTTATCTTTGTCCT | + |
|
Preference number: 4 (lower is better) Translates to: LHTLGYHTITLLVIKQNSGRRRS*EAYLCP Trigger: AGGACAAAGATAAGCCTCCCAGCTTCTCCGTCGTCC...TGAGTTTTGTTTAATTACAAGTAAGGTAATGGTGTGATATCCCAATGTGTGCAG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000053414.13 ENSMUST00000231339.2 |
||
| CDS-3UTR CCA 90 bp | CTGCACACATTGGGATATCACACCATTACCTTACTTGTAATTAAACAAAACTCACACATTCTTTGTCTTTaGCTGCCATGCGGAGGGCAC | + |
|
Preference number: 4 (lower is better) Translates to: LHTLGYHTITLLVIKQNSHILCL*LPCGGH Trigger: GTGCCCTCCGCATGGCAGCCAAAGACAAAGAATGTG...TGAGTTTTGTTTAATTACAAGTAAGGTAATGGTGTGATATCCCAATGTGTGCAG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000053414.13 ENSMUST00000231339.2 |
||
| CDS-3UTR CCA 90 bp | CTGCACACATTGGGATATCACACCATTACCTTACTTGTAATTAAACAAAACTCAAAGGCACAGAGAGGTTaGAATGGTCTCGGGATCCCA | + |
|
Preference number: 4 (lower is better) Translates to: LHTLGYHTITLLVIKQNSKAQRG*NGLGIP Trigger: TGGGATCCCGAGACCATTCCAACCTCTCTGTGCCTT...TGAGTTTTGTTTAATTACAAGTAAGGTAATGGTGTGATATCCCAATGTGTGCAG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000053414.13 ENSMUST00000231339.2 |
||
| CDS-3UTR TCA 90 bp | CTGCACACATTGGGATATCACACCATTACCTTACTTGTAATTAAACAAAACTCACTGGCTCTCATAGCTTaGCAGCTCTGCATTGTGCTT | + |
|
Preference number: 4 (lower is better) Translates to: LHTLGYHTITLLVIKQNSLALIA*QLCIVL Trigger: AAGCACAATGCAGAGCTGTCAAGCTATGAGAGCCAG...TGAGTTTTGTTTAATTACAAGTAAGGTAATGGTGTGATATCCCAATGTGTGCAG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000053414.13 ENSMUST00000125077.9 ENSMUST00000231339.2 |
||
| CDS-3UTR TCA 90 bp | CTGCACACATTGGGATATCACACCATTACCTTACTTGTAATTAAACAAAACTCACTTTCCCTGAAGTTCTaGATTCTGAGCGCAGAGCCT | + |
|
Preference number: 4 (lower is better) Translates to: LHTLGYHTITLLVIKQNSLSLKF*ILSAEP Trigger: AGGCTCTGCGCTCAGAATTCAGAACTTCAGGGAAAG...TGAGTTTTGTTTAATTACAAGTAAGGTAATGGTGTGATATCCCAATGTGTGCAG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000053414.13 ENSMUST00000125077.9 ENSMUST00000231339.2 |
||
| CDS-3UTR TCA 90 bp | TGTGGTTTTGAAGTGCGAATTCTCACGAACCAGTTGTTCATGGGAGGTCTCAATTTTTTCCTGCATAAGTaGCTCGTATTCTTGATTGCA | + |
|
Preference number: 4 (lower is better) Translates to: CGFEVRILTNQLFMGGLNFFLHK*LVFLIA Trigger: TGCAATCAAGAATACGAGTCACTTATGCAGGAAAAA...ATTGAGACCTCCCATGAACAACTGGTTCGTGAGAATTCGCACTTCAAAACCACA 41% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000125077.9 |
||
| CDS-3UTR TCA 90 bp | CTGCACACATTGGGATATCACACCATTACCTTACTTGTAATTAAACAAAACTCACGTAACTGTTCCCTCTaGTGTTTTGGGAATTGGCGC | + |
|
Preference number: 4 (lower is better) Translates to: LHTLGYHTITLLVIKQNSRNCSL*CFGNWR Trigger: GCGCCAATTCCCAAAACATCAGAGGGAACAGTTACG...TGAGTTTTGTTTAATTACAAGTAAGGTAATGGTGTGATATCCCAATGTGTGCAG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000053414.13 ENSMUST00000231339.2 |
||
| CDS-3UTR GCA 90 bp | CTGCACACATTGGGATATCACACCATTACCTTACTTGTAATTAAACAAAACTCACACCCTCAGAGTGGTTaGCTCAAACTCTTTCCTCAG | + |
|
Preference number: 4 (lower is better) Translates to: LHTLGYHTITLLVIKQNSHPQSG*LKLFPQ Trigger: CTGAGGAAAGAGTTTGAGGCAACCACTCTGAGGGTG...TGAGTTTTGTTTAATTACAAGTAAGGTAATGGTGTGATATCCCAATGTGTGCAG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000053414.13 ENSMUST00000125077.9 ENSMUST00000231339.2 |
||
| CDS-3UTR GCA 90 bp | CTGCACACATTGGGATATCACACCATTACCTTACTTGTAATTAAACAAAACTCAAGCAACATTTGTGCCTaGTGTTCCCGAAGCAATGCG | + |
|
Preference number: 4 (lower is better) Translates to: LHTLGYHTITLLVIKQNSSNICA*CSRSNA Trigger: CGCATTGCTTCGGGAACAGCAGGCACAAATGTTGCT...TGAGTTTTGTTTAATTACAAGTAAGGTAATGGTGTGATATCCCAATGTGTGCAG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000053414.13 ENSMUST00000231339.2 |
||
| CDS-3UTR CCA 90 bp | CTGCACACATTGGGATATCACACCATTACCTTACTTGTAATTAAACAAAACTCATCCTCACCCTCAGAGTaGTTGCCTCAAACTCTTTCC | + |
|
Preference number: 4 (lower is better) Translates to: LHTLGYHTITLLVIKQNSSSPSE*LPQTLS Trigger: GGAAAGAGTTTGAGGCAACCACTCTGAGGGTGAGGA...TGAGTTTTGTTTAATTACAAGTAAGGTAATGGTGTGATATCCCAATGTGTGCAG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000053414.13 ENSMUST00000125077.9 ENSMUST00000231339.2 |
||
| CDS-3UTR TCA 90 bp | CTGCACACATTGGGATATCACACCATTACCTTACTTGTAATTAAACAAAACTCACTTCTGGTTGTTTTATaGGCACACAGCCTGCTACCA | + |
|
Preference number: 4 (lower is better) Translates to: LHTLGYHTITLLVIKQNSLLVVL*AHSLLP Trigger: TGGTAGCAGGCTGTGTGCTCATAAAACAACCAGAAG...TGAGTTTTGTTTAATTACAAGTAAGGTAATGGTGTGATATCCCAATGTGTGCAG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000053414.13 ENSMUST00000231339.2 |
||
| CDS-3UTR GCA 90 bp | CTGCACACATTGGGATATCACACCATTACCTTACTTGTAATTAAACAAAACTCAGTCTTCTCTTGTTCGTaGTTCTCCAGGATCTCCTGT | + |
|
Preference number: 4 (lower is better) Translates to: LHTLGYHTITLLVIKQNSVFSCS*FSRISC Trigger: ACAGGAGATCCTGGAGAAGCACGAACAAGAGAAGAC...TGAGTTTTGTTTAATTACAAGTAAGGTAATGGTGTGATATCCCAATGTGTGCAG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000053414.13 ENSMUST00000125077.9 ENSMUST00000231339.2 |
||
| CDS-3UTR GCA 90 bp | CTGCACACATTGGGATATCACACCATTACCTTACTTGTAATTAAACAAAACTCATTCTTGAAATTTCTGTaGCCTCCTCTGCACCTCCAG | + |
|
Preference number: 4 (lower is better) Translates to: LHTLGYHTITLLVIKQNSFLKFL*PPLHLQ Trigger: CTGGAGGTGCAGAGGAGGGCACAGAAATTTCAAGAA...TGAGTTTTGTTTAATTACAAGTAAGGTAATGGTGTGATATCCCAATGTGTGCAG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000053414.13 ENSMUST00000231339.2 |
||
| CDS-3UTR GCA 90 bp | CTGCACACATTGGGATATCACACCATTACCTTACTTGTAATTAAACAAAACTCACTTGAGTCTGTTTGCTaGCAAGATTGCAATCACGCC | + |
|
Preference number: 4 (lower is better) Translates to: LHTLGYHTITLLVIKQNSLESVC*QDCNHA Trigger: GGCGTGATTGCAATCTTGGCAGCAAACAGACTCAAG...TGAGTTTTGTTTAATTACAAGTAAGGTAATGGTGTGATATCCCAATGTGTGCAG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000053414.13 ENSMUST00000231339.2 |
||
| CDS-3UTR GCA 90 bp | CTGCACACATTGGGATATCACACCATTACCTTACTTGTAATTAAACAAAACTCATCTCAGCTCCATCTTTaGCTCGGAGAGACTCTTAAC | + |
|
Preference number: 4 (lower is better) Translates to: LHTLGYHTITLLVIKQNSSQLHL*LGETLN Trigger: GTTAAGAGTCTCTCCGAGGCAAAGATGGAGCTGAGA...TGAGTTTTGTTTAATTACAAGTAAGGTAATGGTGTGATATCCCAATGTGTGCAG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000053414.13 ENSMUST00000231339.2 |
||
| CDS-3UTR GCA 90 bp | CTGCACACATTGGGATATCACACCATTACCTTACTTGTAATTAAACAAAACTCATGCAGTTTGGGTAGCTaGAGGGTGAAGTCATTCCTA | + |
|
Preference number: 4 (lower is better) Translates to: LHTLGYHTITLLVIKQNSCSLGS*RVKSFL Trigger: TAGGAATGACTTCACCCTGCAGCTACCCAAACTGCA...TGAGTTTTGTTTAATTACAAGTAAGGTAATGGTGTGATATCCCAATGTGTGCAG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000053414.13 ENSMUST00000231339.2 |
||
| CDS-3UTR GCA 90 bp | CTGCACACATTGGGATATCACACCATTACCTTACTTGTAATTAAACAAAACTCAGTATCGAGTTCTGCTTaGAATGGAAGCAAGTCCCCA | + |
|
Preference number: 4 (lower is better) Translates to: LHTLGYHTITLLVIKQNSVSSSA*NGSKSP Trigger: TGGGGACTTGCTTCCATTGCAAGCAGAACTCGATAC...TGAGTTTTGTTTAATTACAAGTAAGGTAATGGTGTGATATCCCAATGTGTGCAG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000053414.13 ENSMUST00000231339.2 |
||
| CDS-3UTR CCA 90 bp | CTGCACACATTGGGATATCACACCATTACCTTACTTGTAATTAAACAAAACTCACAGCCTCTGCCTGGCTaGCTTTTTCTACTTGTAAAG | + |
|
Preference number: 4 (lower is better) Translates to: LHTLGYHTITLLVIKQNSQPLPG*LFLLVK Trigger: CTTTACAAGTAGAAAAAGCCAGCCAGGCAGAGGCTG...TGAGTTTTGTTTAATTACAAGTAAGGTAATGGTGTGATATCCCAATGTGTGCAG 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000053414.13 ENSMUST00000125077.9 ENSMUST00000231339.2 |
||
| CDS-3UTR CCA 90 bp | CTGCACACATTGGGATATCACACCATTACCTTACTTGTAATTAAACAAAACTCATCCACTAGGAAGGCCTaGTGCTTCTTAGCCATTACA | + |
|
Preference number: 4 (lower is better) Translates to: LHTLGYHTITLLVIKQNSSTRKA*CFLAIT Trigger: TGTAATGGCTAAGAAGCACCAGGCCTTCCTAGTGGA...TGAGTTTTGTTTAATTACAAGTAAGGTAATGGTGTGATATCCCAATGTGTGCAG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000053414.13 ENSMUST00000231339.2 |
||
| CDS-3UTR CCA 90 bp | CTGCACACATTGGGATATCACACCATTACCTTACTTGTAATTAAACAAAACTCATTATCTTTGTCCTTGTaGACGCCTGATGTCCACTGC | + |
|
Preference number: 4 (lower is better) Translates to: LHTLGYHTITLLVIKQNSLSLSL*TPDVHC Trigger: GCAGTGGACATCAGGCGTCCACAAGGACAAAGATAA...TGAGTTTTGTTTAATTACAAGTAAGGTAATGGTGTGATATCCCAATGTGTGCAG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000053414.13 ENSMUST00000231339.2 |
||
| CDS-3UTR CCA 90 bp | CTGCACACATTGGGATATCACACCATTACCTTACTTGTAATTAAACAAAACTCAAGAAAGGCACAGGATTaGCCCAAAAGCTTGAGTCTG | + |
|
Preference number: 4 (lower is better) Translates to: LHTLGYHTITLLVIKQNSRKAQD*PKSLSL Trigger: CAGACTCAAGCTTTTGGGCCAATCCTGTGCCTTTCT...TGAGTTTTGTTTAATTACAAGTAAGGTAATGGTGTGATATCCCAATGTGTGCAG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000053414.13 ENSMUST00000231339.2 |
||
| CDS-3UTR CCA 90 bp | CTGCACACATTGGGATATCACACCATTACCTTACTTGTAATTAAACAAAACTCAGCTTCTCCAAGAGTCTaGTTTTTGTCAGCTTCCTCG | + |
|
Preference number: 4 (lower is better) Translates to: LHTLGYHTITLLVIKQNSASPRV*FLSASS Trigger: CGAGGAAGCTGACAAAAACCAGACTCTTGGAGAAGC...TGAGTTTTGTTTAATTACAAGTAAGGTAATGGTGTGATATCCCAATGTGTGCAG 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000053414.13 ENSMUST00000231339.2 |
||
| CDS-3UTR CCA 90 bp | CTGCACACATTGGGATATCACACCATTACCTTACTTGTAATTAAACAAAACTCATTGTCCTGCTCCAGCTaGGTAAGATGTCTATTGAGC | + |
|
Preference number: 4 (lower is better) Translates to: LHTLGYHTITLLVIKQNSLSCSS*VRCLLS Trigger: GCTCAATAGACATCTTACCCAGCTGGAGCAGGACAA...TGAGTTTTGTTTAATTACAAGTAAGGTAATGGTGTGATATCCCAATGTGTGCAG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000053414.13 ENSMUST00000231339.2 |
||
| CDS-3UTR CCA 90 bp | CTGCACACATTGGGATATCACACCATTACCTTACTTGTAATTAAACAAAACTCAGAGTTCTGCTTGCAATaGAAGCAAGTCCCCAACTGT | + |
|
Preference number: 4 (lower is better) Translates to: LHTLGYHTITLLVIKQNSEFCLQ*KQVPNC Trigger: ACAGTTGGGGACTTGCTTCCATTGCAAGCAGAACTC...TGAGTTTTGTTTAATTACAAGTAAGGTAATGGTGTGATATCCCAATGTGTGCAG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000053414.13 ENSMUST00000231339.2 |
||
| CDS-3UTR TCA 90 bp | CTGCACACATTGGGATATCACACCATTACCTTACTTGTAATTAAACAAAACTCAAACTCTCCATCCAGGTaGAAAGAAAGGCACAGGATT | + |
|
Preference number: 4 (lower is better) Translates to: LHTLGYHTITLLVIKQNSNSPSR*KERHRI Trigger: AATCCTGTGCCTTTCTTTTCACCTGGATGGAGAGTT...TGAGTTTTGTTTAATTACAAGTAAGGTAATGGTGTGATATCCCAATGTGTGCAG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000053414.13 ENSMUST00000231339.2 |
||
| CDS-3UTR TCA 90 bp | CTGCACACATTGGGATATCACACCATTACCTTACTTGTAATTAAACAAAACTCATCTTGGCTGCACCTATaGGTAAATGTCCACAAATCC | + |
|
Preference number: 4 (lower is better) Translates to: LHTLGYHTITLLVIKQNSSWLHL*VNVHKS Trigger: GGATTTGTGGACATTTACTCATAGGTGCAGCCAAGA...TGAGTTTTGTTTAATTACAAGTAAGGTAATGGTGTGATATCCCAATGTGTGCAG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000053414.13 ENSMUST00000231339.2 |
||
| CDS-3UTR TCA 90 bp | CTGCACACATTGGGATATCACACCATTACCTTACTTGTAATTAAACAAAACTCACTGCAGTGCTTTTCATaGTGGGAATATGGCTGCATA | + |
|
Preference number: 4 (lower is better) Translates to: LHTLGYHTITLLVIKQNSLQCFS*WEYGCI Trigger: TATGCAGCCATATTCCCATCATGAAAAGCACTGCAG...TGAGTTTTGTTTAATTACAAGTAAGGTAATGGTGTGATATCCCAATGTGTGCAG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000053414.13 ENSMUST00000231339.2 |
||
| CDS-3UTR GCA 90 bp | CTGCACACATTGGGATATCACACCATTACCTTACTTGTAATTAAACAAAACTCAACTAGGAAGGCCTGGTaGTTCTTAGCCATTACAAGT | + |
|
Preference number: 4 (lower is better) Translates to: LHTLGYHTITLLVIKQNSTRKAW*FLAITS Trigger: ACTTGTAATGGCTAAGAAGCACCAGGCCTTCCTAGT...TGAGTTTTGTTTAATTACAAGTAAGGTAATGGTGTGATATCCCAATGTGTGCAG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000053414.13 ENSMUST00000231339.2 |
||
| CDS-3UTR GCA 90 bp | CTGCACACATTGGGATATCACACCATTACCTTACTTGTAATTAAACAAAACTCATATGAGCACACAGCCTaGTACCAAGTGCTGATACAA | + |
|
Preference number: 4 (lower is better) Translates to: LHTLGYHTITLLVIKQNSYEHTA*YQVLIQ Trigger: TTGTATCAGCACTTGGTAGCAGGCTGTGTGCTCATA...TGAGTTTTGTTTAATTACAAGTAAGGTAATGGTGTGATATCCCAATGTGTGCAG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000053414.13 ENSMUST00000231339.2 |
||
| CDS-3UTR GCA 90 bp | CTGCACACATTGGGATATCACACCATTACCTTACTTGTAATTAAACAAAACTCAGCATCAACATTCTCCTaGAAGACTGCACAAAGCTCA | + |
|
Preference number: 4 (lower is better) Translates to: LHTLGYHTITLLVIKQNSASTFS*KTAQSS Trigger: TGAGCTTTGTGCAGTCTTGCAGGAGAATGTTGATGC...TGAGTTTTGTTTAATTACAAGTAAGGTAATGGTGTGATATCCCAATGTGTGCAG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000053414.13 ENSMUST00000231339.2 |
||
| CDS-3UTR GCA 90 bp | CTGCACACATTGGGATATCACACCATTACCTTACTTGTAATTAAACAAAACTCAAGCCCTGTTAAGGTCTaGAATGAGGGCATCAACATT | + |
|
Preference number: 4 (lower is better) Translates to: LHTLGYHTITLLVIKQNSSPVKV*NEGINI Trigger: AATGTTGATGCCCTCATTGCAGACCTTAACAGGGCT...TGAGTTTTGTTTAATTACAAGTAAGGTAATGGTGTGATATCCCAATGTGTGCAG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000053414.13 ENSMUST00000231339.2 |
||
| CDS-3UTR GCA 90 bp | CTGCACACATTGGGATATCACACCATTACCTTACTTGTAATTAAACAAAACTCACGGTACACACTAGCATaGCTATGCCTTCTTTACAAC | + |
|
Preference number: 4 (lower is better) Translates to: LHTLGYHTITLLVIKQNSRYTLA*LCLLYN Trigger: GTTGTAAAGAAGGCATAGGCATGCTAGTGTGTACCG...TGAGTTTTGTTTAATTACAAGTAAGGTAATGGTGTGATATCCCAATGTGTGCAG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000053414.13 ENSMUST00000231339.2 |
||
| CDS-3UTR GCA 90 bp | CTGCACACATTGGGATATCACACCATTACCTTACTTGTAATTAAACAAAACTCACGGGATCCCATCGACTaGAAACTTTCATTCTCTCTT | + |
|
Preference number: 4 (lower is better) Translates to: LHTLGYHTITLLVIKQNSRDPID*KLSFSL Trigger: AAGAGAGAATGAAAGTTTGCAGTCGATGGGATCCCG...TGAGTTTTGTTTAATTACAAGTAAGGTAATGGTGTGATATCCCAATGTGTGCAG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000053414.13 ENSMUST00000231339.2 |
||
| CDS-3UTR CCA 90 bp | ATGACTTCTTGCAGCTCTGTCATAGAACTGATAACCGTACCTAGAAGGTCAGAATTCTCTTGGGAAATCTaGAATGTTTTCTCAATCTCA | + |
|
Preference number: 4 (lower is better) Translates to: MTSCSSVIELITVPRRSEFSWEI*NVFSIS Trigger: TGAGATTGAGAAAACATTCCAGATTTCCCAAGAGAA...TTCTGACCTTCTAGGTACGGTTATCAGTTCTATGACAGAGCTGCAAGAAGTCAT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000125077.9 |
||
| CDS-3UTR CCA 90 bp | CTGCACACATTGGGATATCACACCATTACCTTACTTGTAATTAAACAAAACTCAAGAAGTTCAGAGTACTaGAACTCCAGCTCCTTCTTC | + |
|
Preference number: 4 (lower is better) Translates to: LHTLGYHTITLLVIKQNSRSSEY*NSSSFF Trigger: GAAGAAGGAGCTGGAGTTCCAGTACTCTGAACTTCT...TGAGTTTTGTTTAATTACAAGTAAGGTAATGGTGTGATATCCCAATGTGTGCAG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000053414.13 ENSMUST00000231339.2 |
||
| 3UTR CAA 72 bp | TGTTTGGTGGAATCGAGTTCGTTGGATGTCTTTTCCTaGGCATCATTTATGTTGTTTAGCTCATTAGATGCA | + |
|
Preference number: 4 (lower is better) Translates to: CLVESSSLDVFS*ASFMLFSSLDA Trigger: TGCATCTAATGAGCTAAACAACATAAATGATGCCAAGGAAAAGACATCCAACGAACTCGATTCCACCAAACA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000125077.9 |
||
| CDS-3UTR TCA 90 bp | CTGCACACATTGGGATATCACACCATTACCTTACTTGTAATTAAACAAAACTCATGGACAATGTGGTTTTaGAGTGCGAATTCTCACGAA | + |
|
Preference number: 4 (lower is better) Translates to: LHTLGYHTITLLVIKQNSWTMWF*SANSHE Trigger: TTCGTGAGAATTCGCACTTCAAAACCACATTGTCCA...TGAGTTTTGTTTAATTACAAGTAAGGTAATGGTGTGATATCCCAATGTGTGCAG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000053414.13 ENSMUST00000231339.2 |
||
| CDS-3UTR GCA 90 bp | CTGCACACATTGGGATATCACACCATTACCTTACTTGTAATTAAACAAAACTCACTTCTCTCGCTCATATaGACTCTCAACCTCTTTGAA | + |
|
Preference number: 4 (lower is better) Translates to: LHTLGYHTITLLVIKQNSLLSLI*TLNLFE Trigger: TTCAAAGAGGTTGAGAGTGCATATGAGCGAGAGAAG...TGAGTTTTGTTTAATTACAAGTAAGGTAATGGTGTGATATCCCAATGTGTGCAG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000053414.13 ENSMUST00000125077.9 ENSMUST00000231339.2 |
||
| CDS-3UTR GCA 90 bp | CTGCACACATTGGGATATCACACCATTACCTTACTTGTAATTAAACAAAACTCACATGGGAGGTCTCAATaGGGTTCAATTTTTCTGAGT | + |
|
Preference number: 4 (lower is better) Translates to: LHTLGYHTITLLVIKQNSHGRSQ*GSIFLS Trigger: ACTCAGAAAAATTGAACCGCATTGAGACCTCCCATG...TGAGTTTTGTTTAATTACAAGTAAGGTAATGGTGTGATATCCCAATGTGTGCAG 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000053414.13 ENSMUST00000231339.2 |
||
| CDS-3UTR GCA 90 bp | CTGCACACATTGGGATATCACACCATTACCTTACTTGTAATTAAACAAAACTCAAAGCTTGAGTCTGTTTaGTGCCAAGATTGCAATCAC | + |
|
Preference number: 4 (lower is better) Translates to: LHTLGYHTITLLVIKQNSKLESV*CQDCNH Trigger: GTGATTGCAATCTTGGCAGCAAACAGACTCAAGCTT...TGAGTTTTGTTTAATTACAAGTAAGGTAATGGTGTGATATCCCAATGTGTGCAG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000053414.13 ENSMUST00000231339.2 |
||
| CDS-3UTR CCA 90 bp | CTGCACACATTGGGATATCACACCATTACCTTACTTGTAATTAAACAAAACTCATTCCCTCTGATGTTTTaGGAATTGGCGCTTGTCTTT | + |
|
Preference number: 4 (lower is better) Translates to: LHTLGYHTITLLVIKQNSFPLMF*ELALVF Trigger: AAAGACAAGCGCCAATTCCCAAAACATCAGAGGGAA...TGAGTTTTGTTTAATTACAAGTAAGGTAATGGTGTGATATCCCAATGTGTGCAG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000053414.13 ENSMUST00000231339.2 |
||
| CDS-3UTR CCA 90 bp | CTGCACACATTGGGATATCACACCATTACCTTACTTGTAATTAAACAAAACTCATGGAATCGAGTTCGTTaGATGTCTTTTCCTTGGCAT | + |
|
Preference number: 4 (lower is better) Translates to: LHTLGYHTITLLVIKQNSWNRVR*MSFPWH Trigger: ATGCCAAGGAAAAGACATCCAACGAACTCGATTCCA...TGAGTTTTGTTTAATTACAAGTAAGGTAATGGTGTGATATCCCAATGTGTGCAG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000231339.2 |
||
| 3UTR CAA 72 bp | GAGCTAAGTTTATCCATTAGTTTTGCAAAAGAATTCTaGGCTGCACCTATGAGTAAATGTCCACAAATCCTG | + |
|
Preference number: 4 (lower is better) Translates to: ELSLSISFAKEF*AAPMSKCPQIL Trigger: CAGGATTTGTGGACATTTACTCATAGGTGCAGCCAAGAATTCTTTTGCAAAACTAATGGATAAACTTAGCTC 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000125077.9 |
||
| CDS-3UTR TCA 90 bp | CTGCACACATTGGGATATCACACCATTACCTTACTTGTAATTAAACAAAACTCATTTTCTGCAATTTCTTaGAATTTCTGTGCCCTCCTC | + |
|
Preference number: 4 (lower is better) Translates to: LHTLGYHTITLLVIKQNSFSAIS*NFCALL Trigger: GAGGAGGGCACAGAAATTTCAAGAAATTGCAGAAAA...TGAGTTTTGTTTAATTACAAGTAAGGTAATGGTGTGATATCCCAATGTGTGCAG 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000053414.13 ENSMUST00000231339.2 |
||
| CDS-3UTR TCA 90 bp | CTGCACACATTGGGATATCACACCATTACCTTACTTGTAATTAAACAAAACTCAGTGAGATCTGATCTCTaGCCTTATGAAGCATGTTTT | + |
|
Preference number: 4 (lower is better) Translates to: LHTLGYHTITLLVIKQNSVRSDL*PYEACF Trigger: AAAACATGCTTCATAAGGTCAGAGATCAGATCTCAC...TGAGTTTTGTTTAATTACAAGTAAGGTAATGGTGTGATATCCCAATGTGTGCAG 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000053414.13 ENSMUST00000231339.2 |
||
| CDS-3UTR GCA 90 bp | CTGCACACATTGGGATATCACACCATTACCTTACTTGTAATTAAACAAAACTCACTTTTCCTCATTAGATaGATCTTCCAGCTTGTTCTG | + |
|
Preference number: 4 (lower is better) Translates to: LHTLGYHTITLLVIKQNSLFLIR*IFQLVL Trigger: CAGAACAAGCTGGAAGATGCATCTAATGAGGAAAAG...TGAGTTTTGTTTAATTACAAGTAAGGTAATGGTGTGATATCCCAATGTGTGCAG 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000053414.13 |
||
| CDS-3UTR GCA 90 bp | CTGCACACATTGGGATATCACACCATTACCTTACTTGTAATTAAACAAAACTCATCCGTCAGCTTATCCTaGAGCTCCTTTGTATTTTTA | + |
|
Preference number: 4 (lower is better) Translates to: LHTLGYHTITLLVIKQNSSVSLS*SSFVFL Trigger: TAAAAATACAAAGGAGCTGCAGGATAAGCTGACGGA...TGAGTTTTGTTTAATTACAAGTAAGGTAATGGTGTGATATCCCAATGTGTGCAG 37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000053414.13 ENSMUST00000231339.2 |
||
| CDS-3UTR GCA 90 bp | CTGCACACATTGGGATATCACACCATTACCTTACTTGTAATTAAACAAAACTCAAATGTGGTTTTGAAGTaGGAATTCTCACGAACCAGT | + |
|
Preference number: 4 (lower is better) Translates to: LHTLGYHTITLLVIKQNSNVVLK*EFSRTS Trigger: ACTGGTTCGTGAGAATTCGCACTTCAAAACCACATT...TGAGTTTTGTTTAATTACAAGTAAGGTAATGGTGTGATATCCCAATGTGTGCAG 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000053414.13 ENSMUST00000231339.2 |
||
| CDS-3UTR CCA 90 bp | CTGCACACATTGGGATATCACACCATTACCTTACTTGTAATTAAACAAAACTCATCTCAATCTTTTGTTTaGTGGAATCGAGTTCGTTGG | + |
|
Preference number: 4 (lower is better) Translates to: LHTLGYHTITLLVIKQNSSQSFV*WNRVRW Trigger: CCAACGAACTCGATTCCACCAAACAAAAGATTGAGA...TGAGTTTTGTTTAATTACAAGTAAGGTAATGGTGTGATATCCCAATGTGTGCAG 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000053414.13 ENSMUST00000231339.2 |
||
| CDS-3UTR CCA 90 bp | CTGCACACATTGGGATATCACACCATTACCTTACTTGTAATTAAACAAAACTCAATCCAACATGCCTTCTaGTTGTTTTATGAGCACACA | + |
|
Preference number: 4 (lower is better) Translates to: LHTLGYHTITLLVIKQNSIQHAF*LFYEHT Trigger: TGTGTGCTCATAAAACAACCAGAAGGCATGTTGGAT...TGAGTTTTGTTTAATTACAAGTAAGGTAATGGTGTGATATCCCAATGTGTGCAG 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000053414.13 ENSMUST00000231339.2 |
||
| CDS-3UTR CCA 90 bp | CTGCACACATTGGGATATCACACCATTACCTTACTTGTAATTAAACAAAACTCACAGATATACTCCAGATaGCTTATCTTCTCATTAGCC | + |
|
Preference number: 4 (lower is better) Translates to: LHTLGYHTITLLVIKQNSQIYSR*LIFSLA Trigger: GGCTAATGAGAAGATAAGCCATCTGGAGTATATCTG...TGAGTTTTGTTTAATTACAAGTAAGGTAATGGTGTGATATCCCAATGTGTGCAG 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000053414.13 ENSMUST00000231339.2 |
||
| CDS-3UTR CCA 90 bp | CTGCACACATTGGGATATCACACCATTACCTTACTTGTAATTAAACAAAACTCACTTTCAAACTTCTCGTaGGTGATCAATTTAGAGTGC | + |
|
Preference number: 4 (lower is better) Translates to: LHTLGYHTITLLVIKQNSLSNFS*VINLEC Trigger: GCACTCTAAATTGATCACCCACGAGAAGTTTGAAAG...TGAGTTTTGTTTAATTACAAGTAAGGTAATGGTGTGATATCCCAATGTGTGCAG 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000053414.13 ENSMUST00000231339.2 |
||
| CDS-3UTR TCA 90 bp | CTGCACACATTGGGATATCACACCATTACCTTACTTGTAATTAAACAAAACTCATTTTTCCTGCATAAGTaGCTCGTATTCTTGATTGCA | + |
|
Preference number: 4 (lower is better) Translates to: LHTLGYHTITLLVIKQNSFFLHK*LVFLIA Trigger: TGCAATCAAGAATACGAGTCACTTATGCAGGAAAAA...TGAGTTTTGTTTAATTACAAGTAAGGTAATGGTGTGATATCCCAATGTGTGCAG 36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000053414.13 ENSMUST00000125077.9 ENSMUST00000231339.2 |
||
| CDS-3UTR TCA 90 bp | CTGCACACATTGGGATATCACACCATTACCTTACTTGTAATTAAACAAAACTCATCTATAGTTCTCATGTaGTTCGCAACACATTCTTTG | + |
|
Preference number: 4 (lower is better) Translates to: LHTLGYHTITLLVIKQNSSIVLM*FATHSL Trigger: CAAAGAATGTGTTGCGAATCACATGAGAACTATAGA...TGAGTTTTGTTTAATTACAAGTAAGGTAATGGTGTGATATCCCAATGTGTGCAG 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000053414.13 ENSMUST00000231339.2 |
||
| CDS-3UTR GCA 90 bp | CTGCACACATTGGGATATCACACCATTACCTTACTTGTAATTAAACAAAACTCAATGTGCTGCTCTTTCTaGTTCAATATTCTCTTCCAA | + |
|
Preference number: 4 (lower is better) Translates to: LHTLGYHTITLLVIKQNSMCCSF*FNILFQ Trigger: TTGGAAGAGAATATTGAAGCAGAAAGAGCAGCACAT...TGAGTTTTGTTTAATTACAAGTAAGGTAATGGTGTGATATCCCAATGTGTGCAG 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000053414.13 ENSMUST00000125077.9 ENSMUST00000231339.2 |
||
| CDS-3UTR GCA 90 bp | CTGCACACATTGGGATATCACACCATTACCTTACTTGTAATTAAACAAAACTCATTACTAATGACTTCTTaGAGCTCTGTCATAGAACTG | + |
|
Preference number: 4 (lower is better) Translates to: LHTLGYHTITLLVIKQNSLLMTS*SSVIEL Trigger: CAGTTCTATGACAGAGCTGCAAGAAGTCATTAGTAA...TGAGTTTTGTTTAATTACAAGTAAGGTAATGGTGTGATATCCCAATGTGTGCAG 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000053414.13 ENSMUST00000231339.2 |
||
| CDS-3UTR GCA 90 bp | CTGCACACATTGGGATATCACACCATTACCTTACTTGTAATTAAACAAAACTCAGTAAACCCAAATATTTaGTTTTGTAACGCTGCAGTG | + |
|
Preference number: 4 (lower is better) Translates to: LHTLGYHTITLLVIKQNSVNPNI*FCNAAV Trigger: CACTGCAGCGTTACAAAAGCAAATATTTGGGTTTAC...TGAGTTTTGTTTAATTACAAGTAAGGTAATGGTGTGATATCCCAATGTGTGCAG 36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000053414.13 ENSMUST00000231339.2 |
||
| CDS-3UTR CCA 90 bp | CTGCACACATTGGGATATCACACCATTACCTTACTTGTAATTAAACAAAACTCATTCTCTTGGGAAATCTaGAATGTTTTCTCAATCTCA | + |
|
Preference number: 4 (lower is better) Translates to: LHTLGYHTITLLVIKQNSFSWEI*NVFSIS Trigger: TGAGATTGAGAAAACATTCCAGATTTCCCAAGAGAA...TGAGTTTTGTTTAATTACAAGTAAGGTAATGGTGTGATATCCCAATGTGTGCAG 34% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000053414.13 ENSMUST00000125077.9 ENSMUST00000231339.2 |
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| CDS-3UTR CCA 90 bp | CTGCACACATTGGGATATCACACCATTACCTTACTTGTAATTAAACAAAACTCAAATGTCCACAAATCCTaGAATTTGGATCTGTTTTAC | + |
|
Preference number: 4 (lower is better) Translates to: LHTLGYHTITLLVIKQNSNVHKS*NLDLFY Trigger: GTAAAACAGATCCAAATTCCAGGATTTGTGGACATT...TGAGTTTTGTTTAATTACAAGTAAGGTAATGGTGTGATATCCCAATGTGTGCAG 34% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000053414.13 ENSMUST00000231339.2 |
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| CDS-3UTR CAA 90 bp | GCTGGAGTGCAATTCAAGTCTATAGTTCAGCTCCTGCAGCTGCTGGGCCTGTTCCAGGCGTTCCTCCCTTaGAGTGCTAAACTCAAGCTC | + |
|
Preference number: 5 (lower is better) Translates to: AGVQFKSIVQLLQLLGLFQAFLP*SAKLKL Trigger: GAGCTTGAGTTTAGCACTCAAAGGGAGGAACGCCTG...GAACAGGCCCAGCAGCTGCAGGAGCTGAACTATAGACTTGAATTGCACTCCAGC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000125077.9 |
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| CDS-3UTR CAA 90 bp | TTGTGGACGCCTGATGTCCACTGCGCTGACACGCTAAAGCTGCCCAAGATGGATTCACCCTCAGAGTGGTaGCCTCAAACTCTTTCCTCA | + |
|
Preference number: 5 (lower is better) Translates to: LWTPDVHCADTLKLPKMDSPSEW*PQTLSS Trigger: TGAGGAAAGAGTTTGAGGCAACCACTCTGAGGGTGA...ATCCATCTTGGGCAGCTTTAGCGTGTCAGCGCAGTGGACATCAGGCGTCCACAA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000125077.9 |
||
| CDS-3UTR CAA 90 bp | GCTGGAGTGCAATTCAAGTCTATAGTTCAGCTCCTGCAGCTGCTGGGCCTGTTCGCTCTCCTGTGTGTTTaGCTTCTCTCGCTCATATGC | + |
|
Preference number: 5 (lower is better) Translates to: AGVQFKSIVQLLQLLGLFALLCV*LLSLIC Trigger: GCATATGAGCGAGAGAAGCAAAACACACAGGAGAGC...GAACAGGCCCAGCAGCTGCAGGAGCTGAACTATAGACTTGAATTGCACTCCAGC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000125077.9 |
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| CDS CCA 90 bp | TCCAGTTCTCTCACGTTATTCTCGCATGTCTCCACTAGGAAGGCCTaGTGCTTCTTAGCCATTACAAGTTCCTCCTGTAGCTCACCGCAA | + |
|
Preference number: 5 (lower is better) Translates to: SSSLTLFSHVSTRKA*CFLAITSSSCSSPQ Trigger: TTGCGGTGAGCTACAGGAGGAACTTGTAATGGCTAAGAAGCACCAGGCCTTCCTAGTGGAGACATGCGAGAATAACGTGAGAGAACTGGA 50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000053414.13 ENSMUST00000231339.2 |
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| CDS-3UTR CAA 90 bp | TCTCAGCTCCATCTTTGCCTCGGAGAGACTCTTAACAGCTTCTCCAAGAGTCTGTCTGGCTCTCATAGCTaGACAGCTCTGCATTGTGCT | + |
|
Preference number: 5 (lower is better) Translates to: SQLHLCLGETLNSFSKSLSGSHS*TALHCA Trigger: AGCACAATGCAGAGCTGTCAAGCTATGAGAGCCAGA...CAGACTCTTGGAGAAGCTGTTAAGAGTCTCTCCGAGGCAAAGATGGAGCTGAGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000125077.9 |
||
| CDS-3UTR CAA 90 bp | TTTGTGGTACTAGGGATCAAACCCAAGGCCTCAGCCAGTCAAGGTAAGGACTCTTCTGGCTCTCATAGCTaGACAGCTCTGCATTGTGCT | + |
|
Preference number: 5 (lower is better) Translates to: FVVLGIKPKASASQGKDSSGSHS*TALHCA Trigger: AGCACAATGCAGAGCTGTCAAGCTATGAGAGCCAGA...AGAGTCCTTACCTTGACTGGCTGAGGCCTTGGGTTTGATCCCTAGTACCACAAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000126429.8 |
||
| CDS GCA 90 bp | AGTTCTCTCACGTTATTCTCGCATGTCTCCACTAGGAAGGCCTGGTaGTTCTTAGCCATTACAAGTTCCTCCTGTAGCTCACCGCAACTT | + |
|
Preference number: 5 (lower is better) Translates to: SSLTLFSHVSTRKAW*FLAITSSSCSSPQL Trigger: AAGTTGCGGTGAGCTACAGGAGGAACTTGTAATGGCTAAGAAGCACCAGGCCTTCCTAGTGGAGACATGCGAGAATAACGTGAGAGAACT 49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000053414.13 ENSMUST00000231339.2 |
||
| CDS-3UTR CAA 90 bp | AGTTCCAAGCTGTTGACTTGTTCCTGGAGAAAGTCCCTCTGTGTGGATAAGGCACTGCACGGCACTATCTaGCTCCTGTACTATAAGCTG | + |
|
Preference number: 5 (lower is better) Translates to: SSKLLTCSWRKSLCVDKALHGTI*LLYYKL Trigger: CAGCTTATAGTACAGGAGCAAGATAGTGCCGTGCAG...TGCCTTATCCACACAGAGGGACTTTCTCCAGGAACAAGTCAACAGCTTGGAACT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000125077.9 |
||
| CDS CCA 90 bp | TTGAATTCGTTCTTGATCATTTCCAGGTCAGCCACAGCCTCTGCCTaGCTGGCTTTTTCTACTTGTAAAGCTCCTTCAAGGTCTCGAATC | + |
|
Preference number: 5 (lower is better) Translates to: LNSFLIISRSATASA*LAFSTCKAPSRSRI Trigger: GATTCGAGACCTTGAAGGAGCTTTACAAGTAGAAAAAGCCAGCCAGGCAGAGGCTGTGGCTGACCTGGAAATGATCAAGAACGAATTCAA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000053414.13 ENSMUST00000125077.9 ENSMUST00000231339.2 |
||
| CDS-3UTR CAA 90 bp | TTTGTGGTACTAGGGATCAAACCCAAGGCCTCAGCCAGTCAAGGTAAGGACTCTCTTGACAGCTCTGCATaGTGCTTAGTTGTCATTTCT | + |
|
Preference number: 5 (lower is better) Translates to: FVVLGIKPKASASQGKDSLDSSA*CLVVIS Trigger: AGAAATGACAACTAAGCACAATGCAGAGCTGTCAAG...AGAGTCCTTACCTTGACTGGCTGAGGCCTTGGGTTTGATCCCTAGTACCACAAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000126429.8 |
||
| CDS-3UTR CAA 90 bp | TGTGGTTTTGAAGTGCGAATTCTCACGAACCAGTTGTTCATGGGAGGTCTCAATCAGCTCTGTCTTCTCTaGTTCGTGCTTCTCCAGGAT | + |
|
Preference number: 5 (lower is better) Translates to: CGFEVRILTNQLFMGGLNQLCLL*FVLLQD Trigger: ATCCTGGAGAAGCACGAACAAGAGAAGACAGAGCTG...ATTGAGACCTCCCATGAACAACTGGTTCGTGAGAATTCGCACTTCAAAACCACA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000125077.9 |
||
| CDS GCA 90 bp | CAGCTTTGCACAGCTCTCCTGTGTGTTTTGCTTCTCTCGCTCATATaGACTCTCAACCTCTTTGAATTCGTTCTTGATCATTTCCAGGTC | + |
|
Preference number: 5 (lower is better) Translates to: QLCTALLCVLLLSLI*TLNLFEFVLDHFQV Trigger: GACCTGGAAATGATCAAGAACGAATTCAAAGAGGTTGAGAGTGCATATGAGCGAGAGAAGCAAAACACACAGGAGAGCTGTGCAAAGCTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000053414.13 ENSMUST00000125077.9 ENSMUST00000231339.2 |
||
| CDS GCA 90 bp | GTGCTTCTTAGCAAGTTCAGCTTTGCACAGCTCTCCTGTGTGTTTTaGTTCTCTCGCTCATATGCACTCTCAACCTCTTTGAATTCGTTC | + |
|
Preference number: 5 (lower is better) Translates to: VLLSKFSFAQLSCVF*FSRSYALSTSLNSF Trigger: GAACGAATTCAAAGAGGTTGAGAGTGCATATGAGCGAGAGAAGCAAAACACACAGGAGAGCTGTGCAAAGCTGAACTTGCTAAGAAGCAC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000125077.9 |
||
| CDS-3UTR CAA 90 bp | CTGCACACATTGGGATATCACACCATTACCTTACTTGTAATTAAACAAAACTCATCCTCCAGTCGACGCTaGTCCTGCTCCAGCTGGGTA | + |
|
Preference number: 5 (lower is better) Translates to: LHTLGYHTITLLVIKQNSSSSRR*SCSSWV Trigger: TACCCAGCTGGAGCAGGACAAGCGTCGACTGGAGGA...TGAGTTTTGTTTAATTACAAGTAAGGTAATGGTGTGATATCCCAATGTGTGCAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000053414.13 ENSMUST00000231339.2 |
||
| CDS-3UTR CAA 90 bp | CTGCACACATTGGGATATCACACCATTACCTTACTTGTAATTAAACAAAACTCACCTGGAGCCCCTCCATaGCAAAGGTCTCCAGGTGCA | + |
|
Preference number: 5 (lower is better) Translates to: LHTLGYHTITLLVIKQNSPGAPP*QRSPGA Trigger: TGCACCTGGAGACCTTTGCAATGGAGGGGCTCCAGG...TGAGTTTTGTTTAATTACAAGTAAGGTAATGGTGTGATATCCCAATGTGTGCAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000053414.13 ENSMUST00000231339.2 |
||
| CDS-3UTR CAA 90 bp | TCAGCAACATTTGTGCCTGCTGTTCCCGAAGCAATGCGTTATTTAGTTCTTCACTTAGCAAGTTCAGCTTaGCACAGCTCTCCTGTGTGT | + |
|
Preference number: 5 (lower is better) Translates to: SATFVPAVPEAMRYLVLHLASSA*HSSPVC Trigger: ACACACAGGAGAGCTGTGCAAAGCTGAACTTGCTAA...GTGAAGAACTAAATAACGCATTGCTTCGGGAACAGCAGGCACAAATGTTGCTGA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000125077.9 |
||
| CDS GCA 90 bp | TTGTTTGGTGGAATCGAGTTCGTTGGATGTCTTTTCCTCATTAGATaGATCTTCCAGCTTGTTCTGGTAATCTGTCAAGGTCCGCCTCAA | + |
|
Preference number: 5 (lower is better) Translates to: LFGGIEFVGCLFLIR*IFQLVLVICQGPPQ Trigger: TTGAGGCGGACCTTGACAGATTACCAGAACAAGCTGGAAGATGCATCTAATGAGGAAAAGACATCCAACGAACTCGATTCCACCAAACAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000053414.13 |
||
| CDS-3UTR CAA 90 bp | ATGGAGATCTCAAATGCTTTTCACAAAATAAAGAGCCTTGCTGAAGTACAACACGGCATTTTTCAACCTTaGGGTGTCCCCAGGAGTGGC | + |
|
Preference number: 5 (lower is better) Translates to: MEISNAFHKIKSLAEVQHGIFQP*GVPRSG Trigger: GCCACTCCTGGGGACACCCAAAGGTTGAAAAATGCC...GTGTTGTACTTCAGCAAGGCTCTTTATTTTGTGAAAAGCATTTGAGATCTCCAT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENSMUST00000126429.8 |
||
| CDS-3UTR CAA 90 bp | ATGAGGGCATCAACATTCTCCTGCAAGACTGCACAAAGCTCAGACCAAGAGAATCTTGACAGCTCTGCATaGTGCTTAGTTGTCATTTCT | + |
|
Preference number: 5 (lower is better) Translates to: MRASTFSCKTAQSSDQENLDSSA*CLVVIS Trigger: AGAAATGACAACTAAGCACAATGCAGAGCTGTCAAG...ATTCTCTTGGTCTGAGCTTTGTGCAGTCTTGCAGGAGAATGTTGATGCCCTCAT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000125077.9 |
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| CDS-3UTR CAA 90 bp | AGTTCCAAGCTGTTGACTTGTTCCTGGAGAAAGTCCCTCTGTGTGGATAAGGCATTTTCTCAATCTCATTaGCCTTTCCCTGAAGTTCTG | + |
|
Preference number: 5 (lower is better) Translates to: SSKLLTCSWRKSLCVDKAFSQSH*PFPEVL Trigger: CAGAACTTCAGGGAAAGGCAAATGAGATTGAGAAAA...TGCCTTATCCACACAGAGGGACTTTCTCCAGGAACAAGTCAACAGCTTGGAACT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000125077.9 |
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| CDS-3UTR CAA 90 bp | AAAAGCTTGAGTCTGTTTGCTGCCAAGATTGCAATCACGCCTTTCCGGAAGACATCTTTGAATTCGTTCTaGATCATTTCCAGGTCAGCC | + |
|
Preference number: 5 (lower is better) Translates to: KSLSLFAAKIAITPFRKTSLNSF*IISRSA Trigger: GGCTGACCTGGAAATGATCAAGAACGAATTCAAAGA...TGTCTTCCGGAAAGGCGTGATTGCAATCTTGGCAGCAAACAGACTCAAGCTTTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000125077.9 |
||
| CDS-3UTR CAA 90 bp | CTGCACACATTGGGATATCACACCATTACCTTACTTGTAATTAAACAAAACTCAGTCTCCAGGTGCAGTTaGGGTAGCTGCAGGGTGAAG | + |
|
Preference number: 5 (lower is better) Translates to: LHTLGYHTITLLVIKQNSVSRCS*GSCRVK Trigger: CTTCACCCTGCAGCTACCCAAACTGCACCTGGAGAC...TGAGTTTTGTTTAATTACAAGTAAGGTAATGGTGTGATATCCCAATGTGTGCAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000053414.13 ENSMUST00000231339.2 |
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| CDS-3UTR CAA 90 bp | CTGCACACATTGGGATATCACACCATTACCTTACTTGTAATTAAACAAAACTCAGAAGGCACAGAGAGGTaGGAATGGTCTCGGGATCCC | + |
|
Preference number: 5 (lower is better) Translates to: LHTLGYHTITLLVIKQNSEGTER*EWSRDP Trigger: GGGATCCCGAGACCATTCCAACCTCTCTGTGCCTTC...TGAGTTTTGTTTAATTACAAGTAAGGTAATGGTGTGATATCCCAATGTGTGCAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000053414.13 ENSMUST00000231339.2 |
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| CDS-3UTR CAA 90 bp | CTGCACACATTGGGATATCACACCATTACCTTACTTGTAATTAAACAAAACTCAGGCATTTTTCAACCTTaGGGTGTCCCCAGGAGTGGC | + |
|
Preference number: 5 (lower is better) Translates to: LHTLGYHTITLLVIKQNSGIFQP*GVPRSG Trigger: GCCACTCCTGGGGACACCCAAAGGTTGAAAAATGCC...TGAGTTTTGTTTAATTACAAGTAAGGTAATGGTGTGATATCCCAATGTGTGCAG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000053414.13 ENSMUST00000125077.9 ENSMUST00000231339.2 |
||
| CDS-3UTR CAA 90 bp | AAAAGCTTGAGTCTGTTTGCTGCCAAGATTGCAATCACGCCTTTCCGGAAGACAGCACTCTCAACCTCTTaGAATTCGTTCTTGATCATT | + |
|
Preference number: 5 (lower is better) Translates to: KSLSLFAAKIAITPFRKTALSTS*NSFLII Trigger: AATGATCAAGAACGAATTCAAAGAGGTTGAGAGTGC...TGTCTTCCGGAAAGGCGTGATTGCAATCTTGGCAGCAAACAGACTCAAGCTTTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000125077.9 |
||
| CDS-3UTR CAA 90 bp | CTGCACACATTGGGATATCACACCATTACCTTACTTGTAATTAAACAAAACTCATGTTCCGCCACCTTGTaGAAGGTGTCTTCCTGCGTC | + |
|
Preference number: 5 (lower is better) Translates to: LHTLGYHTITLLVIKQNSCSATL*KVSSCV Trigger: GACGCAGGAAGACACCTTCAACAAGGTGGCGGAACA...TGAGTTTTGTTTAATTACAAGTAAGGTAATGGTGTGATATCCCAATGTGTGCAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000053414.13 ENSMUST00000231339.2 |
||
| CDS-3UTR CAA 90 bp | CTGCACACATTGGGATATCACACCATTACCTTACTTGTAATTAAACAAAACTCATTTGGGAATTGGCGCTaGTCTTTGGGCTCCCCGGTA | + |
|
Preference number: 5 (lower is better) Translates to: LHTLGYHTITLLVIKQNSFGNWR*SLGSPV Trigger: TACCGGGGAGCCCAAAGACAAGCGCCAATTCCCAAA...TGAGTTTTGTTTAATTACAAGTAAGGTAATGGTGTGATATCCCAATGTGTGCAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000053414.13 ENSMUST00000231339.2 |
||
| CDS GCA 90 bp | TCTCTTTCTAATAAGTTCAGCTTTGCACAGCTCTCCTGTGTGTTTTaGTTCTCTCGCTCATATGCACTCTCAACCTCTTTGAATTCGTTC | + |
|
Preference number: 5 (lower is better) Translates to: SLSNKFSFAQLSCVF*FSRSYALSTSLNSF Trigger: GAACGAATTCAAAGAGGTTGAGAGTGCATATGAGCGAGAGAAGCAAAACACACAGGAGAGCTGTGCAAAGCTGAACTTATTAGAAAGAGA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000053414.13 ENSMUST00000231339.2 |
||
| CDS-3UTR CAA 90 bp | CTGCACACATTGGGATATCACACCATTACCTTACTTGTAATTAAACAAAACTCACAGGCGTTCCTCCCTTaGAGTGCTAAACTCAAGCTC | + |
|
Preference number: 5 (lower is better) Translates to: LHTLGYHTITLLVIKQNSQAFLP*SAKLKL Trigger: GAGCTTGAGTTTAGCACTCAAAGGGAGGAACGCCTG...TGAGTTTTGTTTAATTACAAGTAAGGTAATGGTGTGATATCCCAATGTGTGCAG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000053414.13 ENSMUST00000125077.9 ENSMUST00000231339.2 |
||
| CDS-3UTR CAA 90 bp | CTGCACACATTGGGATATCACACCATTACCTTACTTGTAATTAAACAAAACTCAGGCTTATCTTTGTCCTaGTGGACGCCTGATGTCCAC | + |
|
Preference number: 5 (lower is better) Translates to: LHTLGYHTITLLVIKQNSGLSLS*WTPDVH Trigger: GTGGACATCAGGCGTCCACAAGGACAAAGATAAGCC...TGAGTTTTGTTTAATTACAAGTAAGGTAATGGTGTGATATCCCAATGTGTGCAG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000053414.13 ENSMUST00000231339.2 |
||
| CDS-3UTR CAA 90 bp | CTGCACACATTGGGATATCACACCATTACCTTACTTGTAATTAAACAAAACTCACTGGGAGGCTTATCTTaGTCCTTGTGGACGCCTGAT | + |
|
Preference number: 5 (lower is better) Translates to: LHTLGYHTITLLVIKQNSLGGLS*SLWTPD Trigger: ATCAGGCGTCCACAAGGACAAAGATAAGCCTCCCAG...TGAGTTTTGTTTAATTACAAGTAAGGTAATGGTGTGATATCCCAATGTGTGCAG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000053414.13 ENSMUST00000231339.2 |
||
| CDS-3UTR CAA 90 bp | CTGCACACATTGGGATATCACACCATTACCTTACTTGTAATTAAACAAAACTCAATCTGTTCCGCCACCTaGTTGAAGGTGTCTTCCTGC | + |
|
Preference number: 5 (lower is better) Translates to: LHTLGYHTITLLVIKQNSICSAT*LKVSSC Trigger: GCAGGAAGACACCTTCAACAAGGTGGCGGAACAGAT...TGAGTTTTGTTTAATTACAAGTAAGGTAATGGTGTGATATCCCAATGTGTGCAG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000053414.13 ENSMUST00000231339.2 |
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| CDS-3UTR CAA 90 bp | CTGCACACATTGGGATATCACACCATTACCTTACTTGTAATTAAACAAAACTCACCAAGAGTCTGGTTTTaGTCAGCTTCCTCGCTGGAG | + |
|
Preference number: 5 (lower is better) Translates to: LHTLGYHTITLLVIKQNSPRVWF*SASSLE Trigger: CTCCAGCGAGGAAGCTGACAAAAACCAGACTCTTGG...TGAGTTTTGTTTAATTACAAGTAAGGTAATGGTGTGATATCCCAATGTGTGCAG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000053414.13 ENSMUST00000231339.2 |
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| CDS-3UTR CAA 90 bp | CTGCACACATTGGGATATCACACCATTACCTTACTTGTAATTAAACAAAACTCAACACATTCTTTGTCTTaGGCTGCCATGCGGAGGGCA | + |
|
Preference number: 5 (lower is better) Translates to: LHTLGYHTITLLVIKQNSTHSLS*AAMRRA Trigger: TGCCCTCCGCATGGCAGCCAAAGACAAAGAATGTGT...TGAGTTTTGTTTAATTACAAGTAAGGTAATGGTGTGATATCCCAATGTGTGCAG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000053414.13 ENSMUST00000231339.2 |
||
| CDS-3UTR CAA 90 bp | CTGCACACATTGGGATATCACACCATTACCTTACTTGTAATTAAACAAAACTCATCTGGCTCTCATAGCTaGACAGCTCTGCATTGTGCT | + |
|
Preference number: 5 (lower is better) Translates to: LHTLGYHTITLLVIKQNSSGSHS*TALHCA Trigger: AGCACAATGCAGAGCTGTCAAGCTATGAGAGCCAGA...TGAGTTTTGTTTAATTACAAGTAAGGTAATGGTGTGATATCCCAATGTGTGCAG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000053414.13 ENSMUST00000125077.9 ENSMUST00000231339.2 |
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| CDS-3UTR CAA 90 bp | CTGCACACATTGGGATATCACACCATTACCTTACTTGTAATTAAACAAAACTCACAGCTCTGTCTTCTCTaGTTCGTGCTTCTCCAGGAT | + |
|
Preference number: 5 (lower is better) Translates to: LHTLGYHTITLLVIKQNSQLCLL*FVLLQD Trigger: ATCCTGGAGAAGCACGAACAAGAGAAGACAGAGCTG...TGAGTTTTGTTTAATTACAAGTAAGGTAATGGTGTGATATCCCAATGTGTGCAG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000053414.13 ENSMUST00000125077.9 ENSMUST00000231339.2 |
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| CDS-3UTR CAA 90 bp | CTGCACACATTGGGATATCACACCATTACCTTACTTGTAATTAAACAAAACTCACTGCACGGCACTATCTaGCTCCTGTACTATAAGCTG | + |
|
Preference number: 5 (lower is better) Translates to: LHTLGYHTITLLVIKQNSLHGTI*LLYYKL Trigger: CAGCTTATAGTACAGGAGCAAGATAGTGCCGTGCAG...TGAGTTTTGTTTAATTACAAGTAAGGTAATGGTGTGATATCCCAATGTGTGCAG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000053414.13 ENSMUST00000125077.9 ENSMUST00000231339.2 |
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| CDS-3UTR CAA 90 bp | CTGCACACATTGGGATATCACACCATTACCTTACTTGTAATTAAACAAAACTCATCACCCTCAGAGTGGTaGCCTCAAACTCTTTCCTCA | + |
|
Preference number: 5 (lower is better) Translates to: LHTLGYHTITLLVIKQNSSPSEW*PQTLSS Trigger: TGAGGAAAGAGTTTGAGGCAACCACTCTGAGGGTGA...TGAGTTTTGTTTAATTACAAGTAAGGTAATGGTGTGATATCCCAATGTGTGCAG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000053414.13 ENSMUST00000125077.9 ENSMUST00000231339.2 |
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| CDS-3UTR CAA 90 bp | CTGCACACATTGGGATATCACACCATTACCTTACTTGTAATTAAACAAAACTCAGCTCTCCTGTGTGTTTaGCTTCTCTCGCTCATATGC | + |
|
Preference number: 5 (lower is better) Translates to: LHTLGYHTITLLVIKQNSALLCV*LLSLIC Trigger: GCATATGAGCGAGAGAAGCAAAACACACAGGAGAGC...TGAGTTTTGTTTAATTACAAGTAAGGTAATGGTGTGATATCCCAATGTGTGCAG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000053414.13 ENSMUST00000125077.9 ENSMUST00000231339.2 |
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| CDS-3UTR CAA 90 bp | CTGCACACATTGGGATATCACACCATTACCTTACTTGTAATTAAACAAAACTCATGTTTGCTGCCAAGATaGCAATCACGCCTTTCCGGA | + |
|
Preference number: 5 (lower is better) Translates to: LHTLGYHTITLLVIKQNSCLLPR*QSRLSG Trigger: TCCGGAAAGGCGTGATTGCAATCTTGGCAGCAAACA...TGAGTTTTGTTTAATTACAAGTAAGGTAATGGTGTGATATCCCAATGTGTGCAG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000053414.13 ENSMUST00000231339.2 |
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| CDS-3UTR CAA 90 bp | CTGCACACATTGGGATATCACACCATTACCTTACTTGTAATTAAACAAAACTCAGATTGGCCCAAAAGCTaGAGTCTGTTTGCTGCCAAG | + |
|
Preference number: 5 (lower is better) Translates to: LHTLGYHTITLLVIKQNSDWPKS*SLFAAK Trigger: CTTGGCAGCAAACAGACTCAAGCTTTTGGGCCAATC...TGAGTTTTGTTTAATTACAAGTAAGGTAATGGTGTGATATCCCAATGTGTGCAG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000053414.13 ENSMUST00000231339.2 |
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| CDS-3UTR CAA 90 bp | CTGCACACATTGGGATATCACACCATTACCTTACTTGTAATTAAACAAAACTCACTGATGTTTTGGGAATaGGCGCTTGTCTTTGGGCTC | + |
|
Preference number: 5 (lower is better) Translates to: LHTLGYHTITLLVIKQNSLMFWE*ALVFGL Trigger: GAGCCCAAAGACAAGCGCCAATTCCCAAAACATCAG...TGAGTTTTGTTTAATTACAAGTAAGGTAATGGTGTGATATCCCAATGTGTGCAG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000053414.13 ENSMUST00000231339.2 |
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| CDS-3UTR CAA 90 bp | CTGCACACATTGGGATATCACACCATTACCTTACTTGTAATTAAACAAAACTCATGTATCGAGTTCTGCTaGCAATGGAAGCAAGTCCCC | + |
|
Preference number: 5 (lower is better) Translates to: LHTLGYHTITLLVIKQNSCIEFC*QWKQVP Trigger: GGGGACTTGCTTCCATTGCAAGCAGAACTCGATACA...TGAGTTTTGTTTAATTACAAGTAAGGTAATGGTGTGATATCCCAATGTGTGCAG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000053414.13 ENSMUST00000231339.2 |
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| CDS-3UTR CAA 90 bp | CTGCACACATTGGGATATCACACCATTACCTTACTTGTAATTAAACAAAACTCACAACATGCCTTCTGGTaGTTTTATGAGCACACAGCC | + |
|
Preference number: 5 (lower is better) Translates to: LHTLGYHTITLLVIKQNSQHAFW*FYEHTA Trigger: GGCTGTGTGCTCATAAAACAACCAGAAGGCATGTTG...TGAGTTTTGTTTAATTACAAGTAAGGTAATGGTGTGATATCCCAATGTGTGCAG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000053414.13 ENSMUST00000231339.2 |
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| CDS-3UTR CAA 90 bp | CTGCACACATTGGGATATCACACCATTACCTTACTTGTAATTAAACAAAACTCATGCAGACTCTGTGACTaGTCCAGCTCCTTTTTCATC | + |
|
Preference number: 5 (lower is better) Translates to: LHTLGYHTITLLVIKQNSCRLCD*SSSFFI Trigger: GATGAAAAAGGAGCTGGACAAGTCACAGAGTCTGCA...TGAGTTTTGTTTAATTACAAGTAAGGTAATGGTGTGATATCCCAATGTGTGCAG 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000053414.13 ENSMUST00000231339.2 |
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| CDS-3UTR CAA 90 bp | CTGCACACATTGGGATATCACACCATTACCTTACTTGTAATTAAACAAAACTCACTAATAAGTTCAGCTTaGCACAGCTCTCCTGTGTGT | + |
|
Preference number: 5 (lower is better) Translates to: LHTLGYHTITLLVIKQNSLISSA*HSSPVC Trigger: ACACACAGGAGAGCTGTGCAAAGCTGAACTTATTAG...TGAGTTTTGTTTAATTACAAGTAAGGTAATGGTGTGATATCCCAATGTGTGCAG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000053414.13 ENSMUST00000231339.2 |
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| CDS-3UTR CAA 90 bp | CTGCACACATTGGGATATCACACCATTACCTTACTTGTAATTAAACAAAACTCACTTGACAGCTCTGCATaGTGCTTAGTTGTCATTTCT | + |
|
Preference number: 5 (lower is better) Translates to: LHTLGYHTITLLVIKQNSLDSSA*CLVVIS Trigger: AGAAATGACAACTAAGCACAATGCAGAGCTGTCAAG...TGAGTTTTGTTTAATTACAAGTAAGGTAATGGTGTGATATCCCAATGTGTGCAG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000053414.13 ENSMUST00000125077.9 ENSMUST00000231339.2 |
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| CDS-3UTR CAA 90 bp | CTGCACACATTGGGATATCACACCATTACCTTACTTGTAATTAAACAAAACTCATCTTTGAATTCGTTCTaGATCATTTCCAGGTCAGCC | + |
|
Preference number: 5 (lower is better) Translates to: LHTLGYHTITLLVIKQNSSLNSF*IISRSA Trigger: GGCTGACCTGGAAATGATCAAGAACGAATTCAAAGA...TGAGTTTTGTTTAATTACAAGTAAGGTAATGGTGTGATATCCCAATGTGTGCAG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000053414.13 ENSMUST00000125077.9 ENSMUST00000231339.2 |
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| CDS-3UTR CAA 90 bp | CTGCACACATTGGGATATCACACCATTACCTTACTTGTAATTAAACAAAACTCAGTGAGTCTCAATCTTTaGTTTGGTGGAATCGAGTTC | + |
|
Preference number: 5 (lower is better) Translates to: LHTLGYHTITLLVIKQNSVSLNL*FGGIEF Trigger: GAACTCGATTCCACCAAACAAAAGATTGAGACTCAC...TGAGTTTTGTTTAATTACAAGTAAGGTAATGGTGTGATATCCCAATGTGTGCAG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000053414.13 ENSMUST00000231339.2 |
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| CDS-3UTR CAA 90 bp | CTGCACACATTGGGATATCACACCATTACCTTACTTGTAATTAAACAAAACTCATTTTCTCAATCTCATTaGCCTTTCCCTGAAGTTCTG | + |
|
Preference number: 5 (lower is better) Translates to: LHTLGYHTITLLVIKQNSFSQSH*PFPEVL Trigger: CAGAACTTCAGGGAAAGGCAAATGAGATTGAGAAAA...TGAGTTTTGTTTAATTACAAGTAAGGTAATGGTGTGATATCCCAATGTGTGCAG 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000053414.13 ENSMUST00000125077.9 ENSMUST00000231339.2 |
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| CDS-3UTR CAA 90 bp | CTGCACACATTGGGATATCACACCATTACCTTACTTGTAATTAAACAAAACTCAGCACTCTCAACCTCTTaGAATTCGTTCTTGATCATT | + |
|
Preference number: 5 (lower is better) Translates to: LHTLGYHTITLLVIKQNSALSTS*NSFLII Trigger: AATGATCAAGAACGAATTCAAAGAGGTTGAGAGTGC...TGAGTTTTGTTTAATTACAAGTAAGGTAATGGTGTGATATCCCAATGTGTGCAG 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000053414.13 ENSMUST00000125077.9 ENSMUST00000231339.2 |
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| CDS-3UTR CAA 90 bp | CTGCACACATTGGGATATCACACCATTACCTTACTTGTAATTAAACAAAACTCACTCATCGTATCGGACTaGTTTTTACAGATATACTCC | + |
|
Preference number: 5 (lower is better) Translates to: LHTLGYHTITLLVIKQNSLIVSD*FLQIYS Trigger: GGAGTATATCTGTAAAAACAAGTCCGATACGATGAG...TGAGTTTTGTTTAATTACAAGTAAGGTAATGGTGTGATATCCCAATGTGTGCAG 37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000053414.13 ENSMUST00000231339.2 |
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| CDS-3UTR CAA 90 bp | CTGCACACATTGGGATATCACACCATTACCTTACTTGTAATTAAACAAAACTCATTTTTCTGCAATTTCTaGAAATTTCTGTGCCCTCCT | + |
|
Preference number: 5 (lower is better) Translates to: LHTLGYHTITLLVIKQNSFFCNF*KFLCPP Trigger: AGGAGGGCACAGAAATTTCAAGAAATTGCAGAAAAA...TGAGTTTTGTTTAATTACAAGTAAGGTAATGGTGTGATATCCCAATGTGTGCAG 36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000053414.13 ENSMUST00000231339.2 |
||
| CDS-3UTR CAA 90 bp | CTGCACACATTGGGATATCACACCATTACCTTACTTGTAATTAAACAAAACTCATTTACTAATGACTTCTaGCAGCTCTGTCATAGAACT | + |
|
Preference number: 5 (lower is better) Translates to: LHTLGYHTITLLVIKQNSFTNDF*QLCHRT Trigger: AGTTCTATGACAGAGCTGCAAGAAGTCATTAGTAAA...TGAGTTTTGTTTAATTACAAGTAAGGTAATGGTGTGATATCCCAATGTGTGCAG 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000053414.13 ENSMUST00000231339.2 |
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| CDS-3UTR CAA 90 bp | CTGCACACATTGGGATATCACACCATTACCTTACTTGTAATTAAACAAAACTCATTTGCAAAAGAATTCTaGGCTGCACCTATGAGTAAA | + |
|
Preference number: 5 (lower is better) Translates to: LHTLGYHTITLLVIKQNSFAKEF*AAPMSK Trigger: TTTACTCATAGGTGCAGCCAAGAATTCTTTTGCAAA...TGAGTTTTGTTTAATTACAAGTAAGGTAATGGTGTGATATCCCAATGTGTGCAG 36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000053414.13 ENSMUST00000231339.2 |
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| CDS-3UTR CAA 90 bp | CTGCACACATTGGGATATCACACCATTACCTTACTTGTAATTAAACAAAACTCATTAAGAAAGTGTAAGTaGTATCGAGTTCTGCTTGCA | + |
|
Preference number: 5 (lower is better) Translates to: LHTLGYHTITLLVIKQNSLRKCK*YRVLLA Trigger: TGCAAGCAGAACTCGATACAACTTACACTTTCTTAA...TGAGTTTTGTTTAATTACAAGTAAGGTAATGGTGTGATATCCCAATGTGTGCAG 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000053414.13 ENSMUST00000231339.2 |
||
| CDS CCA 72 bp | GCAGCGCTTCTCCTTTTTCCACCTCAGACCGCAGCCTaGCAATCTGGCTCTCATAGCTTGACAGCTCTGCAT | + |
|
Preference number: 6 (lower is better) Translates to: AALLLFPPQTAA*QSGSHSLTALH Trigger: ATGCAGAGCTGTCAAGCTATGAGAGCCAGATTGCCAGGCTGCGGTCTGAGGTGGAAAAAGGAGAAGCGCTGC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000053414.13 ENSMUST00000125077.9 ENSMUST00000126429.8 ENSMUST00000231339.2 |
||
| CDS CAA 72 bp | GGTTGCCTCAAACTCTTTCCTCAGGCGTTCCTCCCTTaGAGTGCTAAACTCAAGCTCGCTCGTCTGTCGCCG | + |
|
Preference number: 6 (lower is better) Translates to: GCLKLFPQAFLP*SAKLKLARLSP Trigger: CGGCGACAGACGAGCGAGCTTGAGTTTAGCACTCAAAGGGAGGAACGCCTGAGGAAAGAGTTTGAGGCAACC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000053414.13 ENSMUST00000125077.9 ENSMUST00000231339.2 |
||
| CDS CCA 72 bp | CTCACGTTATTCTCGCATGTCTCCACTAGGAAGGCCTaGTGCTTCTTAGCCATTACAAGTTCCTCCTGTAGC | + |
|
Preference number: 6 (lower is better) Translates to: LTLFSHVSTRKA*CFLAITSSSCS Trigger: GCTACAGGAGGAACTTGTAATGGCTAAGAAGCACCAGGCCTTCCTAGTGGAGACATGCGAGAATAACGTGAG 50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000053414.13 ENSMUST00000231339.2 |
||
| CDS CAA 90 bp | TGCTTCTCTCGCTCATATGCACTCTCAACCTCTTTGAATTCGTTCTaGATCATTTCCAGGTCAGCCACAGCCTCTGCCTGGCTGGCTTTT | + |
|
Preference number: 6 (lower is better) Translates to: CFSRSYALSTSLNSF*IISRSATASAWLAF Trigger: AAAAGCCAGCCAGGCAGAGGCTGTGGCTGACCTGGAAATGATCAAGAACGAATTCAAAGAGGTTGAGAGTGCATATGAGCGAGAGAAGCA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000053414.13 ENSMUST00000125077.9 ENSMUST00000231339.2 |
||
| CDS GCA 72 bp | ACGTTATTCTCGCATGTCTCCACTAGGAAGGCCTGGTaGTTCTTAGCCATTACAAGTTCCTCCTGTAGCTCA | + |
|
Preference number: 6 (lower is better) Translates to: TLFSHVSTRKAW*FLAITSSSCSS Trigger: TGAGCTACAGGAGGAACTTGTAATGGCTAAGAAGCACCAGGCCTTCCTAGTGGAGACATGCGAGAATAACGT 49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000053414.13 ENSMUST00000231339.2 |
||
| CDS CAA 90 bp | TCCTGTGTGTTTTGCTTCTCTCGCTCATATGCACTCTCAACCTCTTaGAATTCGTTCTTGATCATTTCCAGGTCAGCCACAGCCTCTGCC | + |
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Preference number: 6 (lower is better) Translates to: SCVFCFSRSYALSTS*NSFLIISRSATASA Trigger: GGCAGAGGCTGTGGCTGACCTGGAAATGATCAAGAACGAATTCAAAGAGGTTGAGAGTGCATATGAGCGAGAGAAGCAAAACACACAGGA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000053414.13 ENSMUST00000125077.9 ENSMUST00000231339.2 |
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| CDS GCA 72 bp | AGCAAGTTCAGCTTTGCACAGCTCTCCTGTGTGTTTTaGTTCTCTCGCTCATATGCACTCTCAACCTCTTTG | + |
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Preference number: 6 (lower is better) Translates to: SKFSFAQLSCVF*FSRSYALSTSL Trigger: CAAAGAGGTTGAGAGTGCATATGAGCGAGAGAAGCAAAACACACAGGAGAGCTGTGCAAAGCTGAACTTGCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000125077.9 |
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| CDS GCA 72 bp | AATAAGTTCAGCTTTGCACAGCTCTCCTGTGTGTTTTaGTTCTCTCGCTCATATGCACTCTCAACCTCTTTG | + |
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Preference number: 6 (lower is better) Translates to: NKFSFAQLSCVF*FSRSYALSTSL Trigger: CAAAGAGGTTGAGAGTGCATATGAGCGAGAGAAGCAAAACACACAGGAGAGCTGTGCAAAGCTGAACTTATT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000053414.13 ENSMUST00000231339.2 |
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| CDS GCA 72 bp | ACAGCTCTCCTGTGTGTTTTGCTTCTCTCGCTCATATaGACTCTCAACCTCTTTGAATTCGTTCTTGATCAT | + |
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Preference number: 6 (lower is better) Translates to: TALLCVLLLSLI*TLNLFEFVLDH Trigger: ATGATCAAGAACGAATTCAAAGAGGTTGAGAGTGCATATGAGCGAGAGAAGCAAAACACACAGGAGAGCTGT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000053414.13 ENSMUST00000125077.9 ENSMUST00000231339.2 |
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| CDS GCA 72 bp | GGAATCGAGTTCGTTGGATGTCTTTTCCTCATTAGATaGATCTTCCAGCTTGTTCTGGTAATCTGTCAAGGT | + |
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Preference number: 6 (lower is better) Translates to: GIEFVGCLFLIR*IFQLVLVICQG Trigger: ACCTTGACAGATTACCAGAACAAGCTGGAAGATGCATCTAATGAGGAAAAGACATCCAACGAACTCGATTCC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000053414.13 |
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| CDS CAA 72 bp | TTTTGCTTCTCTCGCTCATATGCACTCTCAACCTCTTaGAATTCGTTCTTGATCATTTCCAGGTCAGCCACA | + |
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Preference number: 6 (lower is better) Translates to: FCFSRSYALSTS*NSFLIISRSAT Trigger: TGTGGCTGACCTGGAAATGATCAAGAACGAATTCAAAGAGGTTGAGAGTGCATATGAGCGAGAGAAGCAAAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000053414.13 ENSMUST00000125077.9 ENSMUST00000231339.2 |
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| CDS CAA 90 bp | GTTTCTTGTTTTGGGAGAAATATTCTCTTTCTAATAAGTTCAGCTTaGCACAGCTCTCCTGTGTGTTTTGCTTCTCTCGCTCATATGCAC | + |
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Preference number: 6 (lower is better) Translates to: VSCFGRNILFLISSA*HSSPVCFASLAHMH Trigger: GTGCATATGAGCGAGAGAAGCAAAACACACAGGAGAGCTGTGCAAAGCTGAACTTATTAGAAAGAGAATATTTCTCCCAAAACAAGAAAC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000053414.13 ENSMUST00000231339.2 |
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| CDS CCA 72 bp | TTAGTTGTCATTTCTAATTTCTCCTTCTTAGCCCGATaGAGCTTCTTTCTGAGATCAGCGATGATATCTGAC | + |
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Preference number: 6 (lower is better) Translates to: LVVISNFSFLAR*SFFLRSAMISD Trigger: GTCAGATATCATCGCTGATCTCAGAAAGAAGCTCCATCGGGCTAAGAAGGAGAAATTAGAAATGACAACTAA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000053414.13 ENSMUST00000125077.9 ENSMUST00000126429.8 ENSMUST00000231339.2 |
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| CDS CAA 72 bp | TTTGGGAGAAATATTCTCTTTCTAATAAGTTCAGCTTaGCACAGCTCTCCTGTGTGTTTTGCTTCTCTCGCT | + |
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Preference number: 6 (lower is better) Translates to: FGRNILFLISSA*HSSPVCFASLA Trigger: AGCGAGAGAAGCAAAACACACAGGAGAGCTGTGCAAAGCTGAACTTATTAGAAAGAGAATATTTCTCCCAAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000053414.13 ENSMUST00000231339.2 |
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| CDS CAA 90 bp | CTTATCCTGCAGCTCCTTTGTATTTTTAATGTGAGTCTCAATCTTTaGTTTGGTGGAATCGAGTTCGTTGGATGTCTTTTCCTCATTAGA | + |
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Preference number: 6 (lower is better) Translates to: LILQLLCIFNVSLNL*FGGIEFVGCLFLIR Trigger: TCTAATGAGGAAAAGACATCCAACGAACTCGATTCCACCAAACAAAAGATTGAGACTCACATTAAAAATACAAAGGAGCTGCAGGATAAG 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000053414.13 |
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