Pregenerated sensors for CCDC170 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000019767Ensembl transcript IDs: ENSMUST00000019901.7, ENSMUST00000138112.8, ENSMUST00000145465.3
Found 127 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | CTTCTACCATGTGTGTCCCAAGGACAGAACTCGGGTTGCCAGGCTTaGCAGCAAGTGCCTTTACTTTCTCTGGCCCTAGGGATGGCACTT | + |
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Preference number: 1 (lower is better) Translates to: LLPCVSQGQNSGCQA*QQVPLLSLALGMAL Trigger: AAGTGCCATCCCTAGGGCCAGAGAAAGTAAAGGCACTTGCTGCCAAGCCTGGCAACCCGAGTTCTGTCCTTGGGACACACATGGTAGAAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000138112.8 |
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| 3UTR GCA 90 bp | GCCTGTAACTCTAATGCCAAAGAATCTCACTCTCTCTATGGTGTCTaGTGGCCCCTGCGCGTACGCGCACACACACACCTAAATATAAAA | + |
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Preference number: 1 (lower is better) Translates to: ACNSNAKESHSLYGV*WPLRVRAHTHLNIK Trigger: TTTTATATTTAGGTGTGTGTGTGCGCGTACGCGCAGGGGCCAGCAGACACCATAGAGAGAGTGAGATTCTTTGGCATTAGAGTTACAGGC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000138112.8 |
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| 3UTR CCA 90 bp | CCAGCAAGTCCTATCAGCCTCAAAACCAAGTTGAATCTGAAACTGTaGGTTACAAGTGGTACAGCCTCTATCTTGTACATCCTGGCTCCA | + |
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Preference number: 1 (lower is better) Translates to: PASPISLKTKLNLKL*VTSGTASILYILAP Trigger: TGGAGCCAGGATGTACAAGATAGAGGCTGTACCACTTGTAACCCACAGTTTCAGATTCAACTTGGTTTTGAGGCTGATAGGACTTGCTGG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000138112.8 |
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| 3UTR TCA 90 bp | ATTAGTCACACACTATGGCTGAATTTCAAAAATATGAGGAATGTATaGACTGCACAACTGGAGAATCGTACCCCCTCCCTTAGTTCCTCC | + |
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Preference number: 1 (lower is better) Translates to: ISHTLWLNFKNMRNV*TAQLENRTPSLSSS Trigger: GGAGGAACTAAGGGAGGGGGTACGATTCTCCAGTTGTGCAGTTCATACATTCCTCATATTTTTGAAATTCAGCCATAGTGTGTGACTAAT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000138112.8 |
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| 3UTR GCA 90 bp | ATCTTAAGATTTAAACTCATCAGTAATACTCTAGCTAAGATGCTCTaGTTTTCTGAACTCTGTGCACATATGTCCCAATGTAGGCATGAA | + |
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Preference number: 1 (lower is better) Translates to: ILRFKLISNTLAKML*FSELCAHMSQCRHE Trigger: TTCATGCCTACATTGGGACATATGTGCACAGAGTTCAGAAAAGCAGAGCATCTTAGCTAGAGTATTACTGATGAGTTTAAATCTTAAGAT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000138112.8 |
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| 3UTR CAA 90 bp | CCTTCTACCATGTGTGTCCCAAGGACAGAACTCGGGTTGCCAGGCTaGGCAGCAAGTGCCTTTACTTTCTCTGGCCCTAGGGATGGCACT | + |
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Preference number: 2 (lower is better) Translates to: PSTMCVPRTELGLPG*AASAFTFSGPRDGT Trigger: AGTGCCATCCCTAGGGCCAGAGAAAGTAAAGGCACTTGCTGCCAAGCCTGGCAACCCGAGTTCTGTCCTTGGGACACACATGGTAGAAGG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000138112.8 |
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| 3UTR-3UTR GCA 90 bp | TCTCTTCCTTCTACCATGTGTGTCCCAAGGACAGAACTCGGGTTGCCAGGCTTGGAGGAATGTATGAACTaGACAACTGGAGAATCGTAC | + |
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Preference number: 2 (lower is better) Translates to: SLPSTMCVPRTELGLPGLEECMN*TTGESY Trigger: GTACGATTCTCCAGTTGTGCAGTTCATACATTCCTC...CAAGCCTGGCAACCCGAGTTCTGTCCTTGGGACACACATGGTAGAAGGAAGAGA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000138112.8 |
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| 3UTR-3UTR GCA 90 bp | CTTGCAAAAGTCACTTCTCTTCCTTCTACCATGTGTGTCCCAAGGACAGAACTCAGGCTTGGCAGCAAGTaGCTTTACTTTCTCTGGCCC | + |
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Preference number: 2 (lower is better) Translates to: LAKVTSLPSTMCVPRTELRLGSK*LYFLWP Trigger: GGGCCAGAGAAAGTAAAGGCACTTGCTGCCAAGCCT...GAGTTCTGTCCTTGGGACACACATGGTAGAAGGAAGAGAAGTGACTTTTGCAAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000138112.8 |
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| 3UTR-3UTR CCA 90 bp | CCTTCCTTCCTTCATTCCAGCAAGTCCTATCAGCCTCAAAACCAAGTTGAATCTTCGGGTTGCCAGGCTTaGCAGCAAGTGCCTTTACTT | + |
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Preference number: 2 (lower is better) Translates to: PSFLHSSKSYQPQNQVESSGCQA*QQVPLL Trigger: AAGTAAAGGCACTTGCTGCCAAGCCTGGCAACCCGA...AGATTCAACTTGGTTTTGAGGCTGATAGGACTTGCTGGAATGAAGGAAGGAAGG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000138112.8 |
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| 3UTR CAA 90 bp | CTTCCTTCCTTCATTCCAGCAAGTCCTATCAGCCTCAAAACCAAGTaGAATCTGAAACTGTGGGTTACAAGTGGTACAGCCTCTATCTTG | + |
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Preference number: 2 (lower is better) Translates to: LPSFIPASPISLKTK*NLKLWVTSGTASIL Trigger: CAAGATAGAGGCTGTACCACTTGTAACCCACAGTTTCAGATTCAACTTGGTTTTGAGGCTGATAGGACTTGCTGGAATGAAGGAAGGAAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000138112.8 |
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| 3UTR-3UTR TCA 90 bp | GCAAGTCCTATCAGCCTCAAAACCAAGTTGAATCTGAAACTGTGGGTTACAAGTGATGCTCTGCTTTTCTaGACTCTGTGCACATATGTC | + |
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Preference number: 2 (lower is better) Translates to: ASPISLKTKLNLKLWVTSDALLF*TLCTYV Trigger: GACATATGTGCACAGAGTTCAGAAAAGCAGAGCATC...ACTTGTAACCCACAGTTTCAGATTCAACTTGGTTTTGAGGCTGATAGGACTTGC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000138112.8 |
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| 3UTR-3UTR GCA 90 bp | CCTTCCTTCCTTCATTCCAGCAAGTCCTATCAGCCTCAAAACCAAGTTGAATCTCTAGCTAAGATGCTCTaGTTTTCTGAACTCTGTGCA | + |
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Preference number: 2 (lower is better) Translates to: PSFLHSSKSYQPQNQVESLAKML*FSELCA Trigger: TGCACAGAGTTCAGAAAAGCAGAGCATCTTAGCTAG...AGATTCAACTTGGTTTTGAGGCTGATAGGACTTGCTGGAATGAAGGAAGGAAGG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000138112.8 |
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| 3UTR CAA 90 bp | CTACCATGTTACCGTGATCTCATAGTTACACCTTGTATGTGTGGATaGGAAGGCCACTCAGAAATCTATAAACAGGTCCAGATACTATGT | + |
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Preference number: 2 (lower is better) Translates to: LPCYRDLIVTPCMCG*EGHSEIYKQVQILC Trigger: ACATAGTATCTGGACCTGTTTATAGATTTCTGAGTGGCCTTCCAATCCACACATACAAGGTGTAACTATGAGATCACGGTAACATGGTAG 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000138112.8 |
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| 3UTR CAA 90 bp | GCTCCACTACTAACCATGCACAACTCATGCATTGAGTTAGTTCAATaGTTTCTGGGCTCTGGAAAGCATGTAAATAAATGTTTTAAGACT | + |
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Preference number: 2 (lower is better) Translates to: APLLTMHNSCIELVQ*FLGSGKHVNKCFKT Trigger: AGTCTTAAAACATTTATTTACATGCTTTCCAGAGCCCAGAAACAATTGAACTAACTCAATGCATGAGTTGTGCATGGTTAGTAGTGGAGC 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000138112.8 |
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| 3UTR GCA 72 bp | TCTAATGCCAAAGAATCTCACTCTCTCTATGGTGTCTaGTGGCCCCTGCGCGTACGCGCACACACACACCTA | + |
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Preference number: 3 (lower is better) Translates to: SNAKESHSLYGV*WPLRVRAHTHL Trigger: TAGGTGTGTGTGTGCGCGTACGCGCAGGGGCCAGCAGACACCATAGAGAGAGTGAGATTCTTTGGCATTAGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000138112.8 |
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| 3UTR GCA 72 bp | CTTCTACCATGTGTGTCCCAAGGACAGAACTCGGGTTaGCAGGCTTGGCAGCAAGTGCCTTTACTTTCTCTG | + |
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Preference number: 3 (lower is better) Translates to: LLPCVSQGQNSG*QAWQQVPLLSL Trigger: CAGAGAAAGTAAAGGCACTTGCTGCCAAGCCTGGCAACCCGAGTTCTGTCCTTGGGACACACATGGTAGAAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000138112.8 |
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| 3UTR CCA 72 bp | AATGCCAAAGAATCTCACTCTCTCTATGGTGTCTGCTaGCCCCTGCGCGTACGCGCACACACACACCTAAAT | + |
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Preference number: 3 (lower is better) Translates to: NAKESHSLYGVC*PLRVRAHTHLN Trigger: ATTTAGGTGTGTGTGTGCGCGTACGCGCAGGGGCCAGCAGACACCATAGAGAGAGTGAGATTCTTTGGCATT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000138112.8 |
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| 3UTR-3UTR CAA 90 bp | ATGCACAACTCATGCATTGAGTTAGTTCAATTGTTTCTGGGCTCTGGAAAGCATCTCGGGTTGCCAGGCTaGGCAGCAAGTGCCTTTACT | + |
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Preference number: 3 (lower is better) Translates to: MHNSCIELVQLFLGSGKHLGLPG*AASAFT Trigger: AGTAAAGGCACTTGCTGCCAAGCCTGGCAACCCGAG...ATGCTTTCCAGAGCCCAGAAACAATTGAACTAACTCAATGCATGAGTTGTGCAT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000138112.8 |
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| 3UTR TCA 72 bp | CCTGGCTCCACTACTAACCATGCACAACTCATGCATTaGGTTAGTTCAATTGTTTCTGGGCTCTGGAAAGCA | + |
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Preference number: 3 (lower is better) Translates to: PGSTTNHAQLMH*VSSIVSGLWKA Trigger: TGCTTTCCAGAGCCCAGAAACAATTGAACTAACTCAATGCATGAGTTGTGCATGGTTAGTAGTGGAGCCAGG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000138112.8 |
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| 3UTR CCA 72 bp | CAAAACCAAGTTGAATCTGAAACTGTGGGTTACAAGTaGTACAGCCTCTATCTTGTACATCCTGGCTCCACT | + |
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Preference number: 3 (lower is better) Translates to: QNQVESETVGYK*YSLYLVHPGST Trigger: AGTGGAGCCAGGATGTACAAGATAGAGGCTGTACCACTTGTAACCCACAGTTTCAGATTCAACTTGGTTTTG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000138112.8 |
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| 3UTR CCA 72 bp | CCTATCAGCCTCAAAACCAAGTTGAATCTGAAACTGTaGGTTACAAGTGGTACAGCCTCTATCTTGTACATC | + |
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Preference number: 3 (lower is better) Translates to: PISLKTKLNLKL*VTSGTASILYI Trigger: GATGTACAAGATAGAGGCTGTACCACTTGTAACCCACAGTTTCAGATTCAACTTGGTTTTGAGGCTGATAGG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000138112.8 |
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| 3UTR TCA 72 bp | ACACTATGGCTGAATTTCAAAAATATGAGGAATGTATaGACTGCACAACTGGAGAATCGTACCCCCTCCCTT | + |
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Preference number: 3 (lower is better) Translates to: TLWLNFKNMRNV*TAQLENRTPSL Trigger: AAGGGAGGGGGTACGATTCTCCAGTTGTGCAGTTCATACATTCCTCATATTTTTGAAATTCAGCCATAGTGT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000138112.8 |
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| 3UTR GCA 72 bp | TTTAAACTCATCAGTAATACTCTAGCTAAGATGCTCTaGTTTTCTGAACTCTGTGCACATATGTCCCAATGT | + |
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Preference number: 3 (lower is better) Translates to: FKLISNTLAKML*FSELCAHMSQC Trigger: ACATTGGGACATATGTGCACAGAGTTCAGAAAAGCAGAGCATCTTAGCTAGAGTATTACTGATGAGTTTAAA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000138112.8 |
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| CDS-3UTR CCA 90 bp | CATGTGTGTCCCAAGGACAGAACTCGGGTTGCCAGGCTTGGCAGCAAGTGCCTTGGCTCTGCGAGGCTGTaGTGGCCTCCCTGCTGGCCT | + |
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Preference number: 4 (lower is better) Translates to: HVCPKDRTRVARLGSKCLGSARL*WPPCWP Trigger: AGGCCAGCAGGGAGGCCACCACAGCCTCGCAGAGCC...AAGGCACTTGCTGCCAAGCCTGGCAACCCGAGTTCTGTCCTTGGGACACACATG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000138112.8 |
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| CDS-3UTR CCA 90 bp | GGTTGCCAGGCTTGGCAGCAAGTGCCTTTACTTTCTCTGGCCCTAGGGATGGCATCTGCGAGGCTGTGGTaGCCTCCCTGCTGGCCTTCA | + |
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Preference number: 4 (lower is better) Translates to: GCQAWQQVPLLSLALGMASARLW*PPCWPS Trigger: TGAAGGCCAGCAGGGAGGCCACCACAGCCTCGCAGA...TGCCATCCCTAGGGCCAGAGAAAGTAAAGGCACTTGCTGCCAAGCCTGGCAACC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000138112.8 |
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| CDS-3UTR CCA 90 bp | ACCATGTGTGTCCCAAGGACAGAACTCGGGTTGCCAGGCTTGGCAGCAAGTGCCCAGGGAACAAAGTGGTaGTGGTGGTGGTGGCGGTGT | + |
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Preference number: 4 (lower is better) Translates to: TMCVPRTELGLPGLAASAQGTKW*WWWWRC Trigger: ACACCGCCACCACCACCACCACCACTTTGTTCCCTG...GGCACTTGCTGCCAAGCCTGGCAACCCGAGTTCTGTCCTTGGGACACACATGGT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000138112.8 |
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| CDS-3UTR TCA 90 bp | TCTCTTCCTTCTACCATGTGTGTCCCAAGGACAGAACTCGGGTTGCCAGGCTTGCTCCACAGCCAAGGCTaGGCGCGCCTCTTTCTCCTG | + |
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Preference number: 4 (lower is better) Translates to: SLPSTMCVPRTELGLPGLLHSQG*ARLFLL Trigger: CAGGAGAAAGAGGCGCGCTCAGCCTTGGCTGTGGAG...CAAGCCTGGCAACCCGAGTTCTGTCCTTGGGACACACATGGTAGAAGGAAGAGA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000138112.8 |
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| CDS-3UTR CCA 90 bp | GGTTGCCAGGCTTGGCAGCAAGTGCCTTTACTTTCTCTGGCCCTAGGGATGGCATGGTGGCCTCCCTGCTaGCCTTCAAGCTCACATCCA | + |
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Preference number: 4 (lower is better) Translates to: GCQAWQQVPLLSLALGMAWWPPC*PSSSHP Trigger: TGGATGTGAGCTTGAAGGCCAGCAGGGAGGCCACCA...TGCCATCCCTAGGGCCAGAGAAAGTAAAGGCACTTGCTGCCAAGCCTGGCAACC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000138112.8 |
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| CDS-3UTR CCA 90 bp | ACCATGTGTGTCCCAAGGACAGAACTCGGGTTGCCAGGCTTGGCAGCAAGTGCCTCTCCAGCTTCCTCATaGCAAGATGGGCTTCGTCCC | + |
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Preference number: 4 (lower is better) Translates to: TMCVPRTELGLPGLAASASPASS*QDGLRP Trigger: GGGACGAAGCCCATCTTGCCATGAGGAAGCTGGAGA...GGCACTTGCTGCCAAGCCTGGCAACCCGAGTTCTGTCCTTGGGACACACATGGT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000138112.8 |
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| CDS-3UTR GCA 90 bp | CTCTTCCTTCTACCATGTGTGTCCCAAGGACAGAACTCGGGTTGCCAGGCTTGGCTGGAGGTGAGGAGTTaGAGGGACATTCCGGACTCC | + |
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Preference number: 4 (lower is better) Translates to: LFLLPCVSQGQNSGCQAWLEVRS*RDIPDS Trigger: GGAGTCCGGAATGTCCCTGCAACTCCTCACCTCCAG...CCAAGCCTGGCAACCCGAGTTCTGTCCTTGGGACACACATGGTAGAAGGAAGAG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000138112.8 |
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| CDS-3UTR CCA 90 bp | CATGTGTGTCCCAAGGACAGAACTCGGGTTGCCAGGCTTGGCAGCAAGTGCCTTGAGGCCATCCTTCTCTaGCTCTCCTCCTCAATGCCT | + |
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Preference number: 4 (lower is better) Translates to: HVCPKDRTRVARLGSKCLEAILL*LSSSMP Trigger: AGGCATTGAGGAGGAGAGCCAGAGAAGGATGGCCTC...AAGGCACTTGCTGCCAAGCCTGGCAACCCGAGTTCTGTCCTTGGGACACACATG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000138112.8 |
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| CDS-3UTR TCA 90 bp | CTCTTCCTTCTACCATGTGTGTCCCAAGGACAGAACTCGGGTTGCCAGGCTTGGATCTGGGCTTCAAGCTaGGAGGCCATCCTTCTCTGG | + |
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Preference number: 4 (lower is better) Translates to: LFLLPCVSQGQNSGCQAWIWASS*EAILLW Trigger: CCAGAGAAGGATGGCCTCTCAGCTTGAAGCCCAGAT...CCAAGCCTGGCAACCCGAGTTCTGTCCTTGGGACACACATGGTAGAAGGAAGAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000138112.8 |
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| CDS-3UTR CCA 90 bp | CACTTCTCTTCCTTCTACCATGTGTGTCCCAAGGACAGAACTCGGGTTGCCAGGCAGCGTTTCCTCAGCTaGGTCAGCTCCTGCTTCGAG | + |
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Preference number: 4 (lower is better) Translates to: HFSSFYHVCPKDRTRVARQRFLS*VSSCFE Trigger: CTCGAAGCAGGAGCTGACCCAGCTGAGGAAACGCTG...CCTGGCAACCCGAGTTCTGTCCTTGGGACACACATGGTAGAAGGAAGAGAAGTG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000138112.8 |
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| 3UTR CAA 72 bp | ATGTGTGTCCCAAGGACAGAACTCGGGTTGCCAGGCTaGGCAGCAAGTGCCTTTACTTTCTCTGGCCCTAGG | + |
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Preference number: 4 (lower is better) Translates to: MCVPRTELGLPG*AASAFTFSGPR Trigger: CCTAGGGCCAGAGAAAGTAAAGGCACTTGCTGCCAAGCCTGGCAACCCGAGTTCTGTCCTTGGGACACACAT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000138112.8 |
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| CDS-3UTR GCA 90 bp | CTCTTCCTTCTACCATGTGTGTCCCAAGGACAGAACTCGGGTTGCCAGGCTTGGTGTGCTCGAGCCTCCTaGTCTGTGTTTTCCAGCTCA | + |
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Preference number: 4 (lower is better) Translates to: LFLLPCVSQGQNSGCQAWCARAS*SVFSSS Trigger: TGAGCTGGAAAACACAGAGCAGGAGGCTCGAGCACA...CCAAGCCTGGCAACCCGAGTTCTGTCCTTGGGACACACATGGTAGAAGGAAGAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000138112.8 |
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| CDS-3UTR GCA 90 bp | TCTCTTCCTTCTACCATGTGTGTCCCAAGGACAGAACTCGGGTTGCCAGGCTTGGCTTCTTTCCTGGTGTaGTCGAGCCTCCTGCTCTGT | + |
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Preference number: 4 (lower is better) Translates to: SLPSTMCVPRTELGLPGLASFLV*SSLLLC Trigger: ACAGAGCAGGAGGCTCGAGCACACCAGGAAAGAAGC...CAAGCCTGGCAACCCGAGTTCTGTCCTTGGGACACACATGGTAGAAGGAAGAGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000138112.8 |
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| CDS-3UTR TCA 90 bp | CACTTCTCTTCCTTCTACCATGTGTGTCCCAAGGACAGAACTCGGGTTGCCAGGCTGCCAGTTTGGCTTTaGGCTCAGTGTTGTGCTCCT | + |
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Preference number: 4 (lower is better) Translates to: HFSSFYHVCPKDRTRVARLPVWL*AQCCAP Trigger: AGGAGCACAACACTGAGCTCAAAGCCAAACTGGCAG...CCTGGCAACCCGAGTTCTGTCCTTGGGACACACATGGTAGAAGGAAGAGAAGTG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000138112.8 |
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| CDS-3UTR TCA 90 bp | AGGTCAGAGGACAGCTTGCAAAAGTCACTTCTCTTCCTTCTACCATGTGTGTCCGGGACTTCTGGGCGATaGCTGGCAGTTCCCTCTGGA | + |
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Preference number: 4 (lower is better) Translates to: RSEDSLQKSLLFLLPCVSGTSGR*LAVPSG Trigger: TCCAGAGGGAACTGCCAGTCATCGCCCAGAAGTCCC...GGACACACATGGTAGAAGGAAGAGAAGTGACTTTTGCAAGCTGTCCTCTGACCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000138112.8 |
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| CDS-3UTR GCA 90 bp | ATCAGCCTCAAAACCAAGTTGAATCTGAAACTGTGGGTTACAAGTGGTACAGCCCAGGAGTTCCGGCTCTaGGAGGCTGTGGTGGCCTCC | + |
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Preference number: 4 (lower is better) Translates to: ISLKTKLNLKLWVTSGTAQEFRL*EAVVAS Trigger: GGAGGCCACCACAGCCTCGCAGAGCCGGAACTCCTG...GGCTGTACCACTTGTAACCCACAGTTTCAGATTCAACTTGGTTTTGAGGCTGAT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000138112.8 |
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| CDS-3UTR GCA 90 bp | GGTTGCCAGGCTTGGCAGCAAGTGCCTTTACTTTCTCTGGCCCTAGGGATGGCAGAGTTCATTGGTGTCTaGCAGTTTGGCTTTGAGCTC | + |
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Preference number: 4 (lower is better) Translates to: GCQAWQQVPLLSLALGMAEFIGV*QFGFEL Trigger: GAGCTCAAAGCCAAACTGGCAGACACCAATGAACTC...TGCCATCCCTAGGGCCAGAGAAAGTAAAGGCACTTGCTGCCAAGCCTGGCAACC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000138112.8 |
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| CDS-3UTR GCA 90 bp | GGTTGCCAGGCTTGGCAGCAAGTGCCTTTACTTTCTCTGGCCCTAGGGATGGCAACTCTATCATGGCTCTaGTTCTTTCCTGGTGTGCTC | + |
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Preference number: 4 (lower is better) Translates to: GCQAWQQVPLLSLALGMATLSWL*FFPGVL Trigger: GAGCACACCAGGAAAGAAGCAGAGCCATGATAGAGT...TGCCATCCCTAGGGCCAGAGAAAGTAAAGGCACTTGCTGCCAAGCCTGGCAACC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000138112.8 |
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| CDS-3UTR CCA 90 bp | TCTCTTCCTTCTACCATGTGTGTCCCAAGGACAGAACTCGGGTTGCCAGGCTTGTTCTCCTGCTGCAGCTaGGCAATTTTCTGCCGAAGG | + |
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Preference number: 4 (lower is better) Translates to: SLPSTMCVPRTELGLPGLFSCCS*AIFCRR Trigger: CCTTCGGCAGAAAATTGCCCAGCTGCAGCAGGAGAA...CAAGCCTGGCAACCCGAGTTCTGTCCTTGGGACACACATGGTAGAAGGAAGAGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000138112.8 |
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| 3UTR CAA 72 bp | CCTTCTACCATGTGTGTCCCAAGGACAGAACTCGGGTaGCCAGGCTTGGCAGCAAGTGCCTTTACTTTCTCT | + |
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Preference number: 4 (lower is better) Translates to: PSTMCVPRTELG*PGLAASAFTFS Trigger: AGAGAAAGTAAAGGCACTTGCTGCCAAGCCTGGCAACCCGAGTTCTGTCCTTGGGACACACATGGTAGAAGG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000138112.8 |
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| CDS-3UTR TCA 90 bp | CTCTTCCTTCTACCATGTGTGTCCCAAGGACAGAACTCGGGTTGCCAGGCTTGGTCTCGAAGCTCGGACTaGGCACATTCAAATTTGACC | + |
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Preference number: 4 (lower is better) Translates to: LFLLPCVSQGQNSGCQAWSRSSD*AHSNLT Trigger: GGTCAAATTTGAATGTGCTCAGTCCGAGCTTCGAGA...CCAAGCCTGGCAACCCGAGTTCTGTCCTTGGGACACACATGGTAGAAGGAAGAG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000138112.8 |
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| CDS-3UTR TCA 90 bp | ACCATGTGTGTCCCAAGGACAGAACTCGGGTTGCCAGGCTTGGCAGCAAGTGCCTCCAGTCTTTCTTTCTaGGTCTTTAGCTTCCTCTGT | + |
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Preference number: 4 (lower is better) Translates to: TMCVPRTELGLPGLAASASSLSF*VFSFLC Trigger: ACAGAGGAAGCTAAAGACTCAGAAAGAAAGACTGGA...GGCACTTGCTGCCAAGCCTGGCAACCCGAGTTCTGTCCTTGGGACACACATGGT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000138112.8 |
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| CDS-3UTR TCA 90 bp | CATGTGTGTCCCAAGGACAGAACTCGGGTTGCCAGGCTTGGCAGCAAGTGCCTTCGAAGGAGGTTCATATaGACTTCTTTGCTCTCCAGT | + |
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Preference number: 4 (lower is better) Translates to: HVCPKDRTRVARLGSKCLRRRFI*TSLLSS Trigger: ACTGGAGAGCAAAGAAGTTCATATGAACCTCCTTCG...AAGGCACTTGCTGCCAAGCCTGGCAACCCGAGTTCTGTCCTTGGGACACACATG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000138112.8 |
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| CDS-3UTR GCA 90 bp | AGGTCAGAGGACAGCTTGCAAAAGTCACTTCTCTTCCTTCTACCATGTGTGTCCGGCAGTGTGAGCAGCTaGCTTGCTCAGCAGCCATGT | + |
|
Preference number: 4 (lower is better) Translates to: RSEDSLQKSLLFLLPCVSGSVSS*LAQQPC Trigger: ACATGGCTGCTGAGCAAGGCAGCTGCTCACACTGCC...GGACACACATGGTAGAAGGAAGAGAAGTGACTTTTGCAAGCTGTCCTCTGACCT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000138112.8 |
||
| CDS-3UTR CCA 90 bp | CATGTGTGTCCCAAGGACAGAACTCGGGTTGCCAGGCTTGGCAGCAAGTGCCTTATATGGCATCCTCTGTaGATTCAGCTGTGTCGAATC | + |
|
Preference number: 4 (lower is better) Translates to: HVCPKDRTRVARLGSKCLIWHPL*IQLCRI Trigger: GATTCGACACAGCTGAATCCACAGAGGATGCCATAT...AAGGCACTTGCTGCCAAGCCTGGCAACCCGAGTTCTGTCCTTGGGACACACATG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000138112.8 |
||
| CDS-3UTR TCA 90 bp | CTTGCAAAAGTCACTTCTCTTCCTTCTACCATGTGTGTCCCAAGGACAGAACTCGTGGTGGTGGCGGTGTaGATGGAGCAGTCTTTCCAG | + |
|
Preference number: 4 (lower is better) Translates to: LAKVTSLPSTMCVPRTELVVVAV*MEQSFQ Trigger: CTGGAAAGACTGCTCCATTCACACCGCCACCACCAC...GAGTTCTGTCCTTGGGACACACATGGTAGAAGGAAGAGAAGTGACTTTTGCAAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000138112.8 |
||
| CDS-3UTR GCA 90 bp | TTGCCTTCCTTCCTTCCTTCATTCCAGCAAGTCCTATCAGCCTCAAAACCAAGTCTGTGGTGGCCTCCCTaGTGGCCTTCAAGCTCACAT | + |
|
Preference number: 4 (lower is better) Translates to: LPSFLPSFQQVLSASKPSLWWPP*WPSSSH Trigger: ATGTGAGCTTGAAGGCCAGCAGGGAGGCCACCACAG...ACTTGGTTTTGAGGCTGATAGGACTTGCTGGAATGAAGGAAGGAAGGAAGGCAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000138112.8 |
||
| CDS-3UTR CCA 90 bp | ATCAGCCTCAAAACCAAGTTGAATCTGAAACTGTGGGTTACAAGTGGTACAGCCGCTGCTGATTCCTCCTaGAGCTCCTCCATCCTGCCC | + |
|
Preference number: 4 (lower is better) Translates to: ISLKTKLNLKLWVTSGTAAADSS*SSSILP Trigger: GGGCAGGATGGAGGAGCTCCAGGAGGAATCAGCAGC...GGCTGTACCACTTGTAACCCACAGTTTCAGATTCAACTTGGTTTTGAGGCTGAT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000138112.8 |
||
| CDS-3UTR CCA 90 bp | TTGCCTTCCTTCCTTCCTTCATTCCAGCAAGTCCTATCAGCCTCAAAACCAAGTGCTCTGCTTCTTTCCTaGTGTGCTCGAGCCTCCTGC | + |
|
Preference number: 4 (lower is better) Translates to: LPSFLPSFQQVLSASKPSALLLS*CARASC Trigger: GCAGGAGGCTCGAGCACACCAGGAAAGAAGCAGAGC...ACTTGGTTTTGAGGCTGATAGGACTTGCTGGAATGAAGGAAGGAAGGAAGGCAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000138112.8 |
||
| CDS-3UTR CCA 90 bp | ATGTATGAACTGCACAACTGGAGAATCGTACCCCCTCCCTTAGTTCCTCCCTCATGGTGGCGGTGTGAATaGAGCAGTCTTTCCAGACAC | + |
|
Preference number: 4 (lower is better) Translates to: MYELHNWRIVPPPLVPPSWWRCE*SSLSRH Trigger: GTGTCTGGAAAGACTGCTCCATTCACACCGCCACCA...TGAGGGAGGAACTAAGGGAGGGGGTACGATTCTCCAGTTGTGCAGTTCATACAT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000138112.8 |
||
| CDS-3UTR CCA 90 bp | AGGTCAGAGGACAGCTTGCAAAAGTCACTTCTCTTCCTTCTACCATGTGTGTCCTCAGCAGCCATGTCTTaGAGGCAGGCACAGGGAACA | + |
|
Preference number: 4 (lower is better) Translates to: RSEDSLQKSLLFLLPCVSSAAMS*RQAQGT Trigger: TGTTCCCTGTGCCTGCCTCCAAGACATGGCTGCTGA...GGACACACATGGTAGAAGGAAGAGAAGTGACTTTTGCAAGCTGTCCTCTGACCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000138112.8 |
||
| CDS-3UTR TCA 90 bp | TTGCCTTCCTTCCTTCCTTCATTCCAGCAAGTCCTATCAGCCTCAAAACCAAGTTCCCCTCCACAGCACTaGGCAAGTCCTGATTCAGCT | + |
|
Preference number: 4 (lower is better) Translates to: LPSFLPSFQQVLSASKPSSPPQH*ASPDSA Trigger: AGCTGAATCAGGACTTGCTCAGTGCTGTGGAGGGGA...ACTTGGTTTTGAGGCTGATAGGACTTGCTGGAATGAAGGAAGGAAGGAAGGCAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000138112.8 |
||
| CDS-3UTR CCA 90 bp | TATCAGCCTCAAAACCAAGTTGAATCTGAAACTGTGGGTTACAAGTGGTACAGCGCACAGGGAACAAAGTaGTGGTGGTGGTGGTGGCGG | + |
|
Preference number: 4 (lower is better) Translates to: YQPQNQVESETVGYKWYSAQGTK*WWWWWR Trigger: CCGCCACCACCACCACCACCACTTTGTTCCCTGTGC...GCTGTACCACTTGTAACCCACAGTTTCAGATTCAACTTGGTTTTGAGGCTGATA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000138112.8 |
||
| CDS-3UTR TCA 90 bp | CCTTCCTTCCTTCATTCCAGCAAGTCCTATCAGCCTCAAAACCAAGTTGAATCTCCTCCGGAGGTGCTCTaGGCCTTGTTTCTTAGACTC | + |
|
Preference number: 4 (lower is better) Translates to: PSFLHSSKSYQPQNQVESPPEVL*ALFLRL Trigger: GAGTCTAAGAAACAAGGCTCAGAGCACCTCCGGAGG...AGATTCAACTTGGTTTTGAGGCTGATAGGACTTGCTGGAATGAAGGAAGGAAGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000138112.8 |
||
| CDS-3UTR TCA 90 bp | CCTTCCTTCCTTCATTCCAGCAAGTCCTATCAGCCTCAAAACCAAGTTGAATCTAGTTCCCTCTGGAGGTaGGGAGTTGCAGGGACATTC | + |
|
Preference number: 4 (lower is better) Translates to: PSFLHSSKSYQPQNQVESSSLWR*GVAGTF Trigger: GAATGTCCCTGCAACTCCTCACCTCCAGAGGGAACT...AGATTCAACTTGGTTTTGAGGCTGATAGGACTTGCTGGAATGAAGGAAGGAAGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000138112.8 |
||
| CDS-3UTR GCA 90 bp | ATCAGCCTCAAAACCAAGTTGAATCTGAAACTGTGGGTTACAAGTGGTACAGCCTGTGAGCAGCTGCCTTaGTCAGCAGCCATGTCTTGG | + |
|
Preference number: 4 (lower is better) Translates to: ISLKTKLNLKLWVTSGTACEQLP*SAAMSW Trigger: CCAAGACATGGCTGCTGAGCAAGGCAGCTGCTCACA...GGCTGTACCACTTGTAACCCACAGTTTCAGATTCAACTTGGTTTTGAGGCTGAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000138112.8 |
||
| CDS-3UTR CCA 90 bp | GGTTGCCAGGCTTGGCAGCAAGTGCCTTTACTTTCTCTGGCCCTAGGGATGGCAATTTTCTCTGTCAGCTaGTCCAGAAACTTCAGATAT | + |
|
Preference number: 4 (lower is better) Translates to: GCQAWQQVPLLSLALGMAIFSVS*SRNFRY Trigger: ATATCTGAAGTTTCTGGACCAGCTGACAGAGAAAAT...TGCCATCCCTAGGGCCAGAGAAAGTAAAGGCACTTGCTGCCAAGCCTGGCAACC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000138112.8 |
||
| CDS-3UTR CCA 90 bp | ATGTATGAACTGCACAACTGGAGAATCGTACCCCCTCCCTTAGTTCCTCCCTCATGGCCAACTCTATCATaGCTCTGCTTCTTTCCTGGT | + |
|
Preference number: 4 (lower is better) Translates to: MYELHNWRIVPPPLVPPSWPTLS*LCFFPG Trigger: ACCAGGAAAGAAGCAGAGCCATGATAGAGTTGGCCA...TGAGGGAGGAACTAAGGGAGGGGGTACGATTCTCCAGTTGTGCAGTTCATACAT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000138112.8 |
||
| CDS-3UTR TCA 90 bp | ATCAGCCTCAAAACCAAGTTGAATCTGAAACTGTGGGTTACAAGTGGTACAGCCTGGAAACCACCTCTCTaGAGTCTGCCAGCTGCATTC | + |
|
Preference number: 4 (lower is better) Translates to: ISLKTKLNLKLWVTSGTAWKPPL*SLPAAF Trigger: GAATGCAGCTGGCAGACTTCAGAGAGGTGGTTTCCA...GGCTGTACCACTTGTAACCCACAGTTTCAGATTCAACTTGGTTTTGAGGCTGAT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000138112.8 |
||
| CDS-3UTR GCA 90 bp | TCTCTTCCTTCTACCATGTGTGTCCCAAGGACAGAACTCGGGTTGCCAGGCTTGTTTGACCAGCATTGCTaGAAGCTCACTTTGAACATT | + |
|
Preference number: 4 (lower is better) Translates to: SLPSTMCVPRTELGLPGLFDQHC*KLTLNI Trigger: AATGTTCAAAGTGAGCTTGCAGCAATGCTGGTCAAA...CAAGCCTGGCAACCCGAGTTCTGTCCTTGGGACACACATGGTAGAAGGAAGAGA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000138112.8 |
||
| CDS-3UTR GCA 90 bp | CCTTCCTTCCTTCATTCCAGCAAGTCCTATCAGCCTCAAAACCAAGTTGAATCTGCCTCTTTCTCCTGCTaGAGCTGGGCAATTTTCTGC | + |
|
Preference number: 4 (lower is better) Translates to: PSFLHSSKSYQPQNQVESASFSC*SWAIFC Trigger: GCAGAAAATTGCCCAGCTGCAGCAGGAGAAAGAGGC...AGATTCAACTTGGTTTTGAGGCTGATAGGACTTGCTGGAATGAAGGAAGGAAGG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000138112.8 |
||
| CDS-3UTR GCA 90 bp | GCAAGTCCTATCAGCCTCAAAACCAAGTTGAATCTGAAACTGTGGGTTACAAGTCGCGCCTCTTTCTCCTaGTGCAGCTGGGCAATTTTC | + |
|
Preference number: 4 (lower is better) Translates to: ASPISLKTKLNLKLWVTSRASFS*CSWAIF Trigger: GAAAATTGCCCAGCTGCAGCAGGAGAAAGAGGCGCG...ACTTGTAACCCACAGTTTCAGATTCAACTTGGTTTTGAGGCTGATAGGACTTGC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000138112.8 |
||
| CDS-3UTR GCA 90 bp | TGCTCTGCTTTTCTGAACTCTGTGCACATATGTCCCAATGTAGGCATGAATCTACTGAAGTCTGCCAGCTaGATTCCTCTCCTCTCCGCT | + |
|
Preference number: 4 (lower is better) Translates to: CSAFLNSVHICPNVGMNLLKSAS*IPLLSA Trigger: AGCGGAGAGGAGAGGAATGCAGCTGGCAGACTTCAG...TAGATTCATGCCTACATTGGGACATATGTGCACAGAGTTCAGAAAAGCAGAGCA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000138112.8 |
||
| CDS-3UTR CCA 90 bp | CTTGCAAAAGTCACTTCTCTTCCTTCTACCATGTGTGTCCCAAGGACAGAACTCTTCTTTTCTGCCACATaGGCCCTCTGTAGGGCTTTC | + |
|
Preference number: 4 (lower is better) Translates to: LAKVTSLPSTMCVPRTELFFSAT*ALCRAF Trigger: GAAAGCCCTACAGAGGGCCCATGTGGCAGAAAAGAA...GAGTTCTGTCCTTGGGACACACATGGTAGAAGGAAGAGAAGTGACTTTTGCAAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000138112.8 |
||
| CDS-3UTR GCA 90 bp | ATGTATGAACTGCACAACTGGAGAATCGTACCCCCTCCCTTAGTTCCTCCCTCACTGACTTTCTGGCACTaGTTTCTTTATAGCTCTCCA | + |
|
Preference number: 4 (lower is better) Translates to: MYELHNWRIVPPPLVPPSLTFWH*FLYSSP Trigger: TGGAGAGCTATAAAGAAAGCAGTGCCAGAAAGTCAG...TGAGGGAGGAACTAAGGGAGGGGGTACGATTCTCCAGTTGTGCAGTTCATACAT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000138112.8 |
||
| CDS-3UTR CCA 90 bp | ATGCACAACTCATGCATTGAGTTAGTTCAATTGTTTCTGGGCTCTGGAAAGCATGGTATCAGGGACTTCTaGGCGATGACTGGCAGTTCC | + |
|
Preference number: 4 (lower is better) Translates to: MHNSCIELVQLFLGSGKHGIRDF*AMTGSS Trigger: GGAACTGCCAGTCATCGCCCAGAAGTCCCTGATACC...ATGCTTTCCAGAGCCCAGAAACAATTGAACTAACTCAATGCATGAGTTGTGCAT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000138112.8 |
||
| CDS-3UTR CCA 90 bp | TTGCCTTCCTTCCTTCCTTCATTCCAGCAAGTCCTATCAGCCTCAAAACCAAGTGGAGAGCTGACTTTCTaGCACTGCTTTCTTTATAGC | + |
|
Preference number: 4 (lower is better) Translates to: LPSFLPSFQQVLSASKPSGELTF*HCFLYS Trigger: GCTATAAAGAAAGCAGTGCCAGAAAGTCAGCTCTCC...ACTTGGTTTTGAGGCTGATAGGACTTGCTGGAATGAAGGAAGGAAGGAAGGCAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000138112.8 |
||
| 3UTR CAA 72 bp | TTCATTCCAGCAAGTCCTATCAGCCTCAAAACCAAGTaGAATCTGAAACTGTGGGTTACAAGTGGTACAGCC | + |
|
Preference number: 4 (lower is better) Translates to: FIPASPISLKTK*NLKLWVTSGTA Trigger: GGCTGTACCACTTGTAACCCACAGTTTCAGATTCAACTTGGTTTTGAGGCTGATAGGACTTGCTGGAATGAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000138112.8 |
||
| CDS-3UTR TCA 90 bp | CCTTCCTTCCTTCATTCCAGCAAGTCCTATCAGCCTCAAAACCAAGTTGAATCTAGCTCGTCTCGGGATTaGTTTAAATCTTCAATGGCT | + |
|
Preference number: 4 (lower is better) Translates to: PSFLHSSKSYQPQNQVESSSSRD*FKSSMA Trigger: AGCCATTGAAGATTTAAATCAATCCCGAGACGAGCT...AGATTCAACTTGGTTTTGAGGCTGATAGGACTTGCTGGAATGAAGGAAGGAAGG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000138112.8 |
||
| 3UTR CAA 72 bp | TACCGTGATCTCATAGTTACACCTTGTATGTGTGGATaGGAAGGCCACTCAGAAATCTATAAACAGGTCCAG | + |
|
Preference number: 4 (lower is better) Translates to: YRDLIVTPCMCG*EGHSEIYKQVQ Trigger: CTGGACCTGTTTATAGATTTCTGAGTGGCCTTCCAATCCACACATACAAGGTGTAACTATGAGATCACGGTA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000138112.8 |
||
| CDS-3UTR TCA 90 bp | GCAAGTCCTATCAGCCTCAAAACCAAGTTGAATCTGAAACTGTGGGTTACAAGTTTCCTCTGTAAGTTGTaGGCCATGGTCTTGTTTTCA | + |
|
Preference number: 4 (lower is better) Translates to: ASPISLKTKLNLKLWVTSFLCKL*AMVLFS Trigger: TGAAAACAAGACCATGGCTCACAACTTACAGAGGAA...ACTTGTAACCCACAGTTTCAGATTCAACTTGGTTTTGAGGCTGATAGGACTTGC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000138112.8 |
||
| CDS-3UTR CCA 90 bp | TATCAGCCTCAAAACCAAGTTGAATCTGAAACTGTGGGTTACAAGTGGTACAGCTTCTTCATTAGTTCCTaGTTCTCCTTCATCATGGCG | + |
|
Preference number: 4 (lower is better) Translates to: YQPQNQVESETVGYKWYSFFISS*FSFIMA Trigger: CGCCATGATGAAGGAGAACCAGGAACTAATGAAGAA...GCTGTACCACTTGTAACCCACAGTTTCAGATTCAACTTGGTTTTGAGGCTGATA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000138112.8 |
||
| CDS-3UTR CCA 90 bp | ATCAGCCTCAAAACCAAGTTGAATCTGAAACTGTGGGTTACAAGTGGTACAGCCGATTTAAATCTTCAATaGCTTTGGTCTGTTCCAAGG | + |
|
Preference number: 4 (lower is better) Translates to: ISLKTKLNLKLWVTSGTADLNLQ*LWSVPR Trigger: CCTTGGAACAGACCAAAGCCATTGAAGATTTAAATC...GGCTGTACCACTTGTAACCCACAGTTTCAGATTCAACTTGGTTTTGAGGCTGAT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000138112.8 |
||
| 3UTR CAA 72 bp | CTAACCATGCACAACTCATGCATTGAGTTAGTTCAATaGTTTCTGGGCTCTGGAAAGCATGTAAATAAATGT | + |
|
Preference number: 4 (lower is better) Translates to: LTMHNSCIELVQ*FLGSGKHVNKC Trigger: ACATTTATTTACATGCTTTCCAGAGCCCAGAAACAATTGAACTAACTCAATGCATGAGTTGTGCATGGTTAG 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000138112.8 |
||
| CDS CCA 90 bp | GCCTCTGCTCTGCTTTTAGAAGCTGAAACCGCTGCTGATTCCTCCTaGAGCTCCTCCATCCTGCCCCTCAGAGACGTGAGGAGAGCTGAC | + |
|
Preference number: 5 (lower is better) Translates to: ASALLLEAETAADSS*SSSILPLRDVRRAD Trigger: GTCAGCTCTCCTCACGTCTCTGAGGGGCAGGATGGAGGAGCTCCAGGAGGAATCAGCAGCGGTTTCAGCTTCTAAAAGCAGAGCAGAGGC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000019901.7 ENSMUST00000138112.8 ENSMUST00000145465.3 |
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| CDS CCA 90 bp | TCAACTCCTTCTGCATCCTCTCCAGCTTCTTCTCCAGCTTCCTCATaGCAAGATGGGCTTCGTCCCTCTCCACAGCCAAGGCTGAGCGCG | + |
|
Preference number: 5 (lower is better) Translates to: STPSASSPASSPASS*QDGLRPSPQPRLSA Trigger: CGCGCTCAGCCTTGGCTGTGGAGAGGGACGAAGCCCATCTTGCCATGAGGAAGCTGGAGAAGAAGCTGGAGAGGATGCAGAAGGAGTTGA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000019901.7 ENSMUST00000138112.8 |
||
| CDS-3UTR CAA 90 bp | ACCATGTGTGTCCCAAGGACAGAACTCGGGTTGCCAGGCTTGGCAGCAAGTGCCTCTGCCAGTTTGGCTTaGAGCTCAGTGTTGTGCTCC | + |
|
Preference number: 5 (lower is better) Translates to: TMCVPRTELGLPGLAASASASLA*SSVLCS Trigger: GGAGCACAACACTGAGCTCAAAGCCAAACTGGCAGA...GGCACTTGCTGCCAAGCCTGGCAACCCGAGTTCTGTCCTTGGGACACACATGGT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000138112.8 |
||
| CDS-3UTR CAA 90 bp | CTCTTCCTTCTACCATGTGTGTCCCAAGGACAGAACTCGGGTTGCCAGGCTTGGTCTGGAGGTGAGGAGTaGCAGGGACATTCCGGACTC | + |
|
Preference number: 5 (lower is better) Translates to: LFLLPCVSQGQNSGCQAWSGGEE*QGHSGL Trigger: GAGTCCGGAATGTCCCTGCAACTCCTCACCTCCAGA...CCAAGCCTGGCAACCCGAGTTCTGTCCTTGGGACACACATGGTAGAAGGAAGAG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000138112.8 |
||
| CDS TCA 90 bp | AGAGCTTCACTTCCCTTTCTAGAGCTGTTCTCCCCTCCACAGCACTaGGCAAGTCCTGATTCAGCTTGTCTTTCTCCTCTGCCCAGGAGG | + |
|
Preference number: 5 (lower is better) Translates to: RASLPFLELFSPPQH*ASPDSACLSPLPRR Trigger: CCTCCTGGGCAGAGGAGAAAGACAAGCTGAATCAGGACTTGCTCAGTGCTGTGGAGGGGAGAACAGCTCTAGAAAGGGAAGTGAAGCTCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000019901.7 ENSMUST00000138112.8 |
||
| CDS-3UTR CAA 90 bp | AGGTCAGAGGACAGCTTGCAAAAGTCACTTCTCTTCCTTCTACCATGTGTGTCCCTCAGCAGCCATGTCTaGGAGGCAGGCACAGGGAAC | + |
|
Preference number: 5 (lower is better) Translates to: RSEDSLQKSLLFLLPCVSLSSHV*EAGTGN Trigger: GTTCCCTGTGCCTGCCTCCAAGACATGGCTGCTGAG...GGACACACATGGTAGAAGGAAGAGAAGTGACTTTTGCAAGCTGTCCTCTGACCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000138112.8 |
||
| CDS GCA 90 bp | TTCAAGGCTGGCCAACTCTATCATGGCTCTGCTTCTTTCCTGGTGTaGTCGAGCCTCCTGCTCTGTGTTTTCCAGCTCAGACATGACCAA | + |
|
Preference number: 5 (lower is better) Translates to: FKAGQLYHGSASFLV*SSLLLCVFQLRHDQ Trigger: TTGGTCATGTCTGAGCTGGAAAACACAGAGCAGGAGGCTCGAGCACACCAGGAAAGAAGCAGAGCCATGATAGAGTTGGCCAGCCTTGAA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000019901.7 ENSMUST00000138112.8 |
||
| CDS CCA 90 bp | TTCAGTTCAAGGCTGGCCAACTCTATCATGGCTCTGCTTCTTTCCTaGTGTGCTCGAGCCTCCTGCTCTGTGTTTTCCAGCTCAGACATG | + |
|
Preference number: 5 (lower is better) Translates to: FSSRLANSIMALLLS*CARASCSVFSSSDM Trigger: CATGTCTGAGCTGGAAAACACAGAGCAGGAGGCTCGAGCACACCAGGAAAGAAGCAGAGCCATGATAGAGTTGGCCAGCCTTGAACTGAA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000019901.7 ENSMUST00000138112.8 |
||
| CDS CCA 90 bp | TCTCCGCTTCATCCAAAGACTTCCTCAGGGTCTTCAGTTCAAGGCTaGCCAACTCTATCATGGCTCTGCTTCTTTCCTGGTGTGCTCGAG | + |
|
Preference number: 5 (lower is better) Translates to: SPLHPKTSSGSSVQG*PTLSWLCFFPGVLE Trigger: CTCGAGCACACCAGGAAAGAAGCAGAGCCATGATAGAGTTGGCCAGCCTTGAACTGAAGACCCTGAGGAAGTCTTTGGATGAAGCGGAGA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000019901.7 ENSMUST00000138112.8 |
||
| CDS CCA 90 bp | AGAACTACATCCAGACACACGTCAAAGCCAAGGTCAGCAGCTACGTaGCCCAACTTCATTTTCTCTGTCAGCTGGTCCAGAAACTTCAGA | + |
|
Preference number: 5 (lower is better) Translates to: RTTSRHTSKPRSAAT*PNFIFSVSWSRNFR Trigger: TCTGAAGTTTCTGGACCAGCTGACAGAGAAAATGAAGTTGGGCCACGTAGCTGCTGACCTTGGCTTTGACGTGTGTCTGGATGTAGTTCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000019901.7 ENSMUST00000138112.8 |
||
| CDS-3UTR CAA 90 bp | TCTCTTCCTTCTACCATGTGTGTCCCAAGGACAGAACTCGGGTTGCCAGGCTTGTCCAAGGTTTTAATCTaGAGTTCATTGGTGTCTGCC | + |
|
Preference number: 5 (lower is better) Translates to: SLPSTMCVPRTELGLPGLSKVLI*SSLVSA Trigger: GGCAGACACCAATGAACTCAAGATTAAAACCTTGGA...CAAGCCTGGCAACCCGAGTTCTGTCCTTGGGACACACATGGTAGAAGGAAGAGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000138112.8 |
||
| CDS TCA 90 bp | TCCAACTTCTTTTCTGCCACATGGGCCCTCTGTAGGGCTTTCTGGTaGGACTCAGATTCATTTCCCAACTTCCCAACAAACTCAGAGATC | + |
|
Preference number: 5 (lower is better) Translates to: SNFFSATWALCRAFW*DSDSFPNFPTNSEI Trigger: GATCTCTGAGTTTGTTGGGAAGTTGGGAAATGAATCTGAGTCTCACCAGAAAGCCCTACAGAGGGCCCATGTGGCAGAAAAGAAGTTGGA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000019901.7 ENSMUST00000138112.8 |
||
| CDS TCA 90 bp | TCTTGGAGCGGAGTTCTCGAAGCTCGGACTGAGCACATTCAAATTTaGCCAGCATTGCTGCAAGCTCACTTTGAACATTTTCAGTCACAT | + |
|
Preference number: 5 (lower is better) Translates to: SWSGVLEARTEHIQI*PALLQAHFEHFQSH Trigger: ATGTGACTGAAAATGTTCAAAGTGAGCTTGCAGCAATGCTGGTCAAATTTGAATGTGCTCAGTCCGAGCTTCGAGAACTCCGCTCCAAGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000019901.7 ENSMUST00000138112.8 |
||
| CDS GCA 90 bp | GAGTTCTCGAAGCTCGGACTGAGCACATTCAAATTTGACCAGCATTaGTGCAAGCTCACTTTGAACATTTTCAGTCACATTCCGGTAGTG | + |
|
Preference number: 5 (lower is better) Translates to: EFSKLGLSTFKFDQH*CKLTLNIFSHIPVV Trigger: CACTACCGGAATGTGACTGAAAATGTTCAAAGTGAGCTTGCAGCAATGCTGGTCAAATTTGAATGTGCTCAGTCCGAGCTTCGAGAACTC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000019901.7 ENSMUST00000138112.8 |
||
| CDS-3UTR CAA 90 bp | GCAAGTCCTATCAGCCTCAAAACCAAGTTGAATCTGAAACTGTGGGTTACAAGTTTGGTGTCTGCCAGTTaGGCTTTGAGCTCAGTGTTG | + |
|
Preference number: 5 (lower is better) Translates to: ASPISLKTKLNLKLWVTSLVSAS*ALSSVL Trigger: CAACACTGAGCTCAAAGCCAAACTGGCAGACACCAA...ACTTGTAACCCACAGTTTCAGATTCAACTTGGTTTTGAGGCTGATAGGACTTGC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000138112.8 |
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| CDS GCA 90 bp | TTCTCGAAGCTCGGACTGAGCACATTCAAATTTGACCAGCATTGCTaGAAGCTCACTTTGAACATTTTCAGTCACATTCCGGTAGTGGTT | + |
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Preference number: 5 (lower is better) Translates to: FSKLGLSTFKFDQHC*KLTLNIFSHIPVVV Trigger: AACCACTACCGGAATGTGACTGAAAATGTTCAAAGTGAGCTTGCAGCAATGCTGGTCAAATTTGAATGTGCTCAGTCCGAGCTTCGAGAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000019901.7 ENSMUST00000138112.8 |
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| CDS GCA 90 bp | ATGGTCTTGTTTTCAATGACAGCATTGCTTTCAAGGCGAACTAACTaGTCTATGCGAGCTAGAACTACATCCAGACACACGTCAAAGCCA | + |
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Preference number: 5 (lower is better) Translates to: MVLFSMTALLSRRTN*SMRARTTSRHTSKP Trigger: TGGCTTTGACGTGTGTCTGGATGTAGTTCTAGCTCGCATAGAGCAGTTAGTTCGCCTTGAAAGCAATGCTGTCATTGAAAACAAGACCAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000019901.7 ENSMUST00000138112.8 |
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| CDS-3UTR CAA 90 bp | GCAAGTCCTATCAGCCTCAAAACCAAGTTGAATCTGAAACTGTGGGTTACAAGTTCTTTAGAAAGCATCTaGGAGCGGAGTTCTCGAAGC | + |
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Preference number: 5 (lower is better) Translates to: ASPISLKTKLNLKLWVTSSLESI*ERSSRS Trigger: GCTTCGAGAACTCCGCTCCAAGATGCTTTCTAAAGA...ACTTGTAACCCACAGTTTCAGATTCAACTTGGTTTTGAGGCTGATAGGACTTGC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000138112.8 |
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| CDS-3UTR CAA 90 bp | GCAAGTCCTATCAGCCTCAAAACCAAGTTGAATCTGAAACTGTGGGTTACAAGTAGGAATGTGGGCTCCTaGTACAGCTCTCTAAGCTTT | + |
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Preference number: 5 (lower is better) Translates to: ASPISLKTKLNLKLWVTSRNVGS*YSSLSF Trigger: AAAGCTTAGAGAGCTGTACAAGGAGCCCACATTCCT...ACTTGTAACCCACAGTTTCAGATTCAACTTGGTTTTGAGGCTGATAGGACTTGC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000138112.8 |
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| CDS TCA 90 bp | TCTTTAGCTTCCTCTGTAAGTTGTGAGCCATGGTCTTGTTTTCAATaGCAGCATTGCTTTCAAGGCGAACTAACTGCTCTATGCGAGCTA | + |
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Preference number: 5 (lower is better) Translates to: SLASSVSCEPWSCFQ*QHCFQGELTALCEL Trigger: TAGCTCGCATAGAGCAGTTAGTTCGCCTTGAAAGCAATGCTGTCATTGAAAACAAGACCATGGCTCACAACTTACAGAGGAAGCTAAAGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000019901.7 ENSMUST00000138112.8 |
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| CDS-3UTR CAA 90 bp | CCTTCCTTCCTTCATTCCAGCAAGTCCTATCAGCCTCAAAACCAAGTTGAATCTTTAATCTTGAGTTCATaGGTGTCTGCCAGTTTGGCT | + |
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Preference number: 5 (lower is better) Translates to: PSFLHSSKSYQPQNQVESLILSS*VSASLA Trigger: AGCCAAACTGGCAGACACCAATGAACTCAAGATTAA...AGATTCAACTTGGTTTTGAGGCTGATAGGACTTGCTGGAATGAAGGAAGGAAGG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000138112.8 |
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| CDS GCA 90 bp | AACTTCATTTTCTCTGTCAGCTGGTCCAGAAACTTCAGATATTTTTaGTTCTCTAGAAACAAGTTGTCTCTCACGACGTCTCCAGAAAGC | + |
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Preference number: 5 (lower is better) Translates to: NFIFSVSWSRNFRYF*FSRNKLSLTTSPES Trigger: GCTTTCTGGAGACGTCGTGAGAGACAACTTGTTTCTAGAGAAGCAAAAATATCTGAAGTTTCTGGACCAGCTGACAGAGAAAATGAAGTT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000019901.7 ENSMUST00000138112.8 |
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| CDS TCA 90 bp | TTTTTCTCTGCATTCTCCTTCATCTTCTCCAGCTCGTCTCGGGATTaGTTTAAATCTTCAATGGCTTTGGTCTGTTCCAAGGTTTTAATC | + |
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Preference number: 5 (lower is better) Translates to: FFSAFSFIFSSSSRD*FKSSMALVCSKVLI Trigger: GATTAAAACCTTGGAACAGACCAAAGCCATTGAAGATTTAAATCAATCCCGAGACGAGCTGGAGAAGATGAAGGAGAATGCAGAGAAAAA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000019901.7 ENSMUST00000138112.8 |
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| CDS-3UTR CAA 90 bp | ATGCACAACTCATGCATTGAGTTAGTTCAATTGTTTCTGGGCTCTGGAAAGCATAAATCTTCAATGGCTTaGGTCTGTTCCAAGGTTTTA | + |
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Preference number: 5 (lower is better) Translates to: MHNSCIELVQLFLGSGKHKSSMA*VCSKVL Trigger: TAAAACCTTGGAACAGACCAAAGCCATTGAAGATTT...ATGCTTTCCAGAGCCCAGAAACAATTGAACTAACTCAATGCATGAGTTGTGCAT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000138112.8 |
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| CDS GCA 72 bp | GGCGATGACTGGCAGTTCCCTCTGGAGGTGAGGAGTTaGAGGGACATTCCGGACTCCCGGAGCCCAAGGAGC | + |
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Preference number: 6 (lower is better) Translates to: GDDWQFPLEVRS*RDIPDSRSPRS Trigger: GCTCCTTGGGCTCCGGGAGTCCGGAATGTCCCTGCAACTCCTCACCTCCAGAGGGAACTGCCAGTCATCGCC 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000138112.8 |
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| CDS CCA 72 bp | AGTTCCGGCTCTGCGAGGCTGTGGTGGCCTCCCTGCTaGCCTTCAAGCTCACATCCAGCTCCTGGCAGCGTT | + |
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Preference number: 6 (lower is better) Translates to: SSGSARLWWPPC*PSSSHPAPGSV Trigger: AACGCTGCCAGGAGCTGGATGTGAGCTTGAAGGCCAGCAGGGAGGCCACCACAGCCTCGCAGAGCCGGAACT 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000019901.7 ENSMUST00000138112.8 |
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| CDS CCA 72 bp | AAGCTCACATCCAGCTCCTGGCAGCGTTTCCTCAGCTaGGTCAGCTCCTGCTTCGAGGCATCCCAGGCTCGC | + |
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Preference number: 6 (lower is better) Translates to: KLTSSSWQRFLS*VSSCFEASQAR Trigger: GCGAGCCTGGGATGCCTCGAAGCAGGAGCTGACCCAGCTGAGGAAACGCTGCCAGGAGCTGGATGTGAGCTT 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000019901.7 ENSMUST00000138112.8 |
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| CDS GCA 72 bp | CTCTCCACAGCCAAGGCTGAGCGCGCCTCTTTCTCCTaGTGCAGCTGGGCAATTTTCTGCCGAAGGAGGTTC | + |
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Preference number: 6 (lower is better) Translates to: LSTAKAERASFS*CSWAIFCRRRF Trigger: GAACCTCCTTCGGCAGAAAATTGCCCAGCTGCAGCAGGAGAAAGAGGCGCGCTCAGCCTTGGCTGTGGAGAG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000019901.7 ENSMUST00000138112.8 |
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| CDS GCA 72 bp | TGCGGAATTTCCACACGGCAGTGTGAGCAGCTGCCTTaGTCAGCAGCCATGTCTTGGAGGCAGGCACAGGGA | + |
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Preference number: 6 (lower is better) Translates to: CGISTRQCEQLP*SAAMSWRQAQG Trigger: TCCCTGTGCCTGCCTCCAAGACATGGCTGCTGAGCAAGGCAGCTGCTCACACTGCCGTGTGGAAATTCCGCA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000019901.7 ENSMUST00000138112.8 |
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| CDS CCA 72 bp | GCTGTTCCCAGGTATCAGGGACTTCTGGGCGATGACTaGCAGTTCCCTCTGGAGGTGAGGAGTTGCAGGGAC | + |
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Preference number: 6 (lower is better) Translates to: AVPRYQGLLGDD*QFPLEVRSCRD Trigger: GTCCCTGCAACTCCTCACCTCCAGAGGGAACTGCCAGTCATCGCCCAGAAGTCCCTGATACCTGGGAACAGC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000138112.8 |
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| CDS TCA 72 bp | TTCAGCTGTTCCCAGGTATCAGGGACTTCTGGGCGATaGCTGGCAGTTCCCTCTGGAGGTGAGGAGTTGCAG | + |
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Preference number: 6 (lower is better) Translates to: FSCSQVSGTSGR*LAVPSGGEELQ Trigger: CTGCAACTCCTCACCTCCAGAGGGAACTGCCAGTCATCGCCCAGAAGTCCCTGATACCTGGGAACAGCTGAA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000138112.8 |
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| CDS GCA 72 bp | TCCACAGCCAAGGCTGAGCGCGCCTCTTTCTCCTGCTaGAGCTGGGCAATTTTCTGCCGAAGGAGGTTCATA | + |
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Preference number: 6 (lower is better) Translates to: STAKAERASFSC*SWAIFCRRRFI Trigger: TATGAACCTCCTTCGGCAGAAAATTGCCCAGCTGCAGCAGGAGAAAGAGGCGCGCTCAGCCTTGGCTGTGGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000019901.7 ENSMUST00000138112.8 |
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| CDS CCA 72 bp | CTGCTTTTAGAAGCTGAAACCGCTGCTGATTCCTCCTaGAGCTCCTCCATCCTGCCCCTCAGAGACGTGAGG | + |
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Preference number: 6 (lower is better) Translates to: LLLEAETAADSS*SSSILPLRDVR Trigger: CCTCACGTCTCTGAGGGGCAGGATGGAGGAGCTCCAGGAGGAATCAGCAGCGGTTTCAGCTTCTAAAAGCAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000019901.7 ENSMUST00000138112.8 ENSMUST00000145465.3 |
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| CDS CCA 72 bp | TCTGCATCCTCTCCAGCTTCTTCTCCAGCTTCCTCATaGCAAGATGGGCTTCGTCCCTCTCCACAGCCAAGG | + |
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Preference number: 6 (lower is better) Translates to: SASSPASSPASS*QDGLRPSPQPR Trigger: CCTTGGCTGTGGAGAGGGACGAAGCCCATCTTGCCATGAGGAAGCTGGAGAAGAAGCTGGAGAGGATGCAGA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000019901.7 ENSMUST00000138112.8 |
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| CDS CCA 72 bp | AGGCTGGCCAACTCTATCATGGCTCTGCTTCTTTCCTaGTGTGCTCGAGCCTCCTGCTCTGTGTTTTCCAGC | + |
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Preference number: 6 (lower is better) Translates to: RLANSIMALLLS*CARASCSVFSS Trigger: GCTGGAAAACACAGAGCAGGAGGCTCGAGCACACCAGGAAAGAAGCAGAGCCATGATAGAGTTGGCCAGCCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000019901.7 ENSMUST00000138112.8 |
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| CDS GCA 72 bp | GCTGAGAGGCCATCCTTCTCTGGCTCTCCTCCTCAATaGCTAGCTCTCGAATCCTCTCCAATATGGCATCCT | + |
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Preference number: 6 (lower is better) Translates to: AERPSFSGSPPQ*LALESSPIWHP Trigger: AGGATGCCATATTGGAGAGGATTCGAGAGCTAGGCATTGAGGAGGAGAGCCAGAGAAGGATGGCCTCTCAGC 54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000019901.7 ENSMUST00000138112.8 |
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| CDS GCA 72 bp | GGCCAACTCTATCATGGCTCTGCTTCTTTCCTGGTGTaGTCGAGCCTCCTGCTCTGTGTTTTCCAGCTCAGA | + |
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Preference number: 6 (lower is better) Translates to: GQLYHGSASFLV*SSLLLCVFQLR Trigger: TCTGAGCTGGAAAACACAGAGCAGGAGGCTCGAGCACACCAGGAAAGAAGCAGAGCCATGATAGAGTTGGCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000019901.7 ENSMUST00000138112.8 |
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| CDS GCA 72 bp | TCTTCAGTTCAAGGCTGGCCAACTCTATCATGGCTCTaGTTCTTTCCTGGTGTGCTCGAGCCTCCTGCTCTG | + |
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Preference number: 6 (lower is better) Translates to: SSVQGWPTLSWL*FFPGVLEPPAL Trigger: CAGAGCAGGAGGCTCGAGCACACCAGGAAAGAAGCAGAGCCATGATAGAGTTGGCCAGCCTTGAACTGAAGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000019901.7 ENSMUST00000138112.8 |
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| CDS GCA 72 bp | CAAGCCCAGCATACTGGAAACCACCTCTCTGAAGTCTaGCAGCTGCATTCCTCTCCTCTCCGCTTCATCCAA | + |
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Preference number: 6 (lower is better) Translates to: QAQHTGNHLSEV*QLHSSPLRFIQ Trigger: TTGGATGAAGCGGAGAGGAGAGGAATGCAGCTGGCAGACTTCAGAGAGGTGGTTTCCAGTATGCTGGGCTTG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000019901.7 ENSMUST00000138112.8 |
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| CDS CCA 72 bp | TCAGGGTCTTCAGTTCAAGGCTGGCCAACTCTATCATaGCTCTGCTTCTTTCCTGGTGTGCTCGAGCCTCCT | + |
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Preference number: 6 (lower is better) Translates to: SGSSVQGWPTLS*LCFFPGVLEPP Trigger: AGGAGGCTCGAGCACACCAGGAAAGAAGCAGAGCCATGATAGAGTTGGCCAGCCTTGAACTGAAGACCCTGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000019901.7 ENSMUST00000138112.8 |
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| CDS GCA 72 bp | ATGGCTCTGCTTCTTTCCTGGTGTGCTCGAGCCTCCTaGTCTGTGTTTTCCAGCTCAGACATGACCAACATG | + |
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Preference number: 6 (lower is better) Translates to: MALLLSWCARAS*SVFSSSDMTNM Trigger: CATGTTGGTCATGTCTGAGCTGGAAAACACAGAGCAGGAGGCTCGAGCACACCAGGAAAGAAGCAGAGCCAT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000019901.7 ENSMUST00000138112.8 |
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| CDS CCA 72 bp | TCCAGACACACGTCAAAGCCAAGGTCAGCAGCTACGTaGCCCAACTTCATTTTCTCTGTCAGCTGGTCCAGA | + |
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Preference number: 6 (lower is better) Translates to: SRHTSKPRSAAT*PNFIFSVSWSR Trigger: TCTGGACCAGCTGACAGAGAAAATGAAGTTGGGCCACGTAGCTGCTGACCTTGGCTTTGACGTGTGTCTGGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000019901.7 ENSMUST00000138112.8 |
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| CDS TCA 72 bp | CTTCCCTTTCTAGAGCTGTTCTCCCCTCCACAGCACTaGGCAAGTCCTGATTCAGCTTGTCTTTCTCCTCTG | + |
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Preference number: 6 (lower is better) Translates to: LPFLELFSPPQH*ASPDSACLSPL Trigger: CAGAGGAGAAAGACAAGCTGAATCAGGACTTGCTCAGTGCTGTGGAGGGGAGAACAGCTCTAGAAAGGGAAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000019901.7 ENSMUST00000138112.8 |
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| CDS CCA 72 bp | CATCCAAAGACTTCCTCAGGGTCTTCAGTTCAAGGCTaGCCAACTCTATCATGGCTCTGCTTCTTTCCTGGT | + |
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Preference number: 6 (lower is better) Translates to: HPKTSSGSSVQG*PTLSWLCFFPG Trigger: ACCAGGAAAGAAGCAGAGCCATGATAGAGTTGGCCAGCCTTGAACTGAAGACCCTGAGGAAGTCTTTGGATG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000019901.7 ENSMUST00000138112.8 |
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| CDS TCA 72 bp | TTTTCTGCCACATGGGCCCTCTGTAGGGCTTTCTGGTaGGACTCAGATTCATTTCCCAACTTCCCAACAAAC | + |
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Preference number: 6 (lower is better) Translates to: FSATWALCRAFW*DSDSFPNFPTN Trigger: GTTTGTTGGGAAGTTGGGAAATGAATCTGAGTCTCACCAGAAAGCCCTACAGAGGGCCCATGTGGCAGAAAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000019901.7 ENSMUST00000138112.8 |
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| CDS CAA 90 bp | GGACTGAGCACATTCAAATTTGACCAGCATTGCTGCAAGCTCACTTaGAACATTTTCAGTCACATTCCGGTAGTGGTTCAGCTGTTCCCA | + |
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Preference number: 6 (lower is better) Translates to: GLSTFKFDQHCCKLT*NIFSHIPVVVQLFP Trigger: TGGGAACAGCTGAACCACTACCGGAATGTGACTGAAAATGTTCAAAGTGAGCTTGCAGCAATGCTGGTCAAATTTGAATGTGCTCAGTCC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000019901.7 ENSMUST00000138112.8 |
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| CDS TCA 72 bp | TTCTTCATTAGTTCCTGGTTCTCCTTCATCATGGCGTaGACAGAGGCCTCTGCTCTGCTTTTAGAAGCTGAA | + |
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Preference number: 6 (lower is better) Translates to: FFISSWFSFIMA*TEASALLLEAE Trigger: TTCAGCTTCTAAAAGCAGAGCAGAGGCCTCTGTTCACGCCATGATGAAGGAGAACCAGGAACTAATGAAGAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000019901.7 ENSMUST00000138112.8 ENSMUST00000145465.3 |
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| CDS TCA 72 bp | GGAGTTCTCGAAGCTCGGACTGAGCACATTCAAATTTaGCCAGCATTGCTGCAAGCTCACTTTGAACATTTT | + |
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Preference number: 6 (lower is better) Translates to: GVLEARTEHIQI*PALLQAHFEHF Trigger: AAAATGTTCAAAGTGAGCTTGCAGCAATGCTGGTCAAATTTGAATGTGCTCAGTCCGAGCTTCGAGAACTCC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000019901.7 ENSMUST00000138112.8 |
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| CDS CAA 72 bp | ACATTCAAATTTGACCAGCATTGCTGCAAGCTCACTTaGAACATTTTCAGTCACATTCCGGTAGTGGTTCAG | + |
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Preference number: 6 (lower is better) Translates to: TFKFDQHCCKLT*NIFSHIPVVVQ Trigger: CTGAACCACTACCGGAATGTGACTGAAAATGTTCAAAGTGAGCTTGCAGCAATGCTGGTCAAATTTGAATGT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000019901.7 ENSMUST00000138112.8 |
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| CDS CAA 72 bp | AGAGTAGCGAGCTGTCCTTTCAGGAATGTGGGCTCCTaGTACAGCTCTCTAAGCTTTAAAATTAAATCTTCA | + |
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Preference number: 6 (lower is better) Translates to: RVASCPFRNVGS*YSSLSFKIKSS Trigger: TGAAGATTTAATTTTAAAGCTTAGAGAGCTGTACAAGGAGCCCACATTCCTGAAAGGACAGCTCGCTACTCT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000019901.7 ENSMUST00000138112.8 |
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