Pregenerated sensors for CCDC17 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000034035Ensembl transcript IDs: ENSMUST00000051869.8
Found 93 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS-3UTR GCA 90 bp | ACTGTTACAAGACCCCATTTAAAAAGCTGCAGGTCTAGAAGAAATTCAGTGTTTCTGGCGCGGGTTCCCTaGAAGACTCGCAGCCTCTCC | + |
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Preference number: 4 (lower is better) Translates to: TVTRPHLKSCRSRRNSVFLARVP*KTRSLS Trigger: GGAGAGGCTGCGAGTCTTGCAGGGAACCCGCGCCAG...AAACACTGAATTTCTTCTAGACCTGCAGCTTTTTAAATGGGGTCTTGTAACAGT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000051869.8 |
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| CDS-3UTR CCA 90 bp | TTTTTGCCACACAGTATTTTAGGATCAAATGTAGTTGGCCACTGTTACAAGACCGGGGTAATCCTCCCTTaGGTCCCGCCACGCTGTGGA | + |
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Preference number: 4 (lower is better) Translates to: FLPHSILGSNVVGHCYKTGVILP*VPPRCG Trigger: TCCACAGCGTGGCGGGACCCAAGGGAGGATTACCCC...GGTCTTGTAACAGTGGCCAACTACATTTGATCCTAAAATACTGTGTGGCAAAAA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000051869.8 |
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| CDS-3UTR CCA 90 bp | TTTTTGCCACACAGTATTTTAGGATCAAATGTAGTTGGCCACTGTTACAAGACCGTGATGGAGGCAGCCTaGGCACAGGCTGCTTGCTTG | + |
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Preference number: 4 (lower is better) Translates to: FLPHSILGSNVVGHCYKTVMEAA*AQAACL Trigger: CAAGCAAGCAGCCTGTGCCCAGGCTGCCTCCATCAC...GGTCTTGTAACAGTGGCCAACTACATTTGATCCTAAAATACTGTGTGGCAAAAA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000051869.8 |
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| CDS-3UTR GCA 90 bp | TTTTTGCCACACAGTATTTTAGGATCAAATGTAGTTGGCCACTGTTACAAGACCCTTCTGTTTCTGCCATaGGTCTGGCGCGGGTTCCCT | + |
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Preference number: 4 (lower is better) Translates to: FLPHSILGSNVVGHCYKTLLFLP*VWRGFP Trigger: AGGGAACCCGCGCCAGACGCATGGCAGAAACAGAAG...GGTCTTGTAACAGTGGCCAACTACATTTGATCCTAAAATACTGTGTGGCAAAAA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000051869.8 |
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| CDS-3UTR GCA 90 bp | TTTTTGCCACACAGTATTTTAGGATCAAATGTAGTTGGCCACTGTTACAAGACCCTGTGCTTCTGTTTCTaGCATGCGTCTGGCGCGGGT | + |
|
Preference number: 4 (lower is better) Translates to: FLPHSILGSNVVGHCYKTLCFCF*HASGAG Trigger: ACCCGCGCCAGACGCATGGCAGAAACAGAAGCACAG...GGTCTTGTAACAGTGGCCAACTACATTTGATCCTAAAATACTGTGTGGCAAAAA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000051869.8 |
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| CDS-3UTR GCA 90 bp | ACTGTTACAAGACCCCATTTAAAAAGCTGCAGGTCTAGAAGAAATTCAGTGTTTCAGCGCCCGGCTCTGTaGTTCTGTTTCTGCCATGCG | + |
|
Preference number: 4 (lower is better) Translates to: TVTRPHLKSCRSRRNSVFQRPAL*FCFCHA Trigger: CGCATGGCAGAAACAGAAGCACAGAGCCGGGCGCTG...AAACACTGAATTTCTTCTAGACCTGCAGCTTTTTAAATGGGGTCTTGTAACAGT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000051869.8 |
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| CDS-3UTR CCA 90 bp | TTTTTGCCACACAGTATTTTAGGATCAAATGTAGTTGGCCACTGTTACAAGACCTGGGGGTGCAACCAGTaGAGGGAGGAGGGAGTTATC | + |
|
Preference number: 4 (lower is better) Translates to: FLPHSILGSNVVGHCYKTWGCNQ*REEGVI Trigger: GATAACTCCCTCCTCCCTCCACTGGTTGCACCCCCA...GGTCTTGTAACAGTGGCCAACTACATTTGATCCTAAAATACTGTGTGGCAAAAA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000051869.8 |
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| CDS-3UTR TCA 90 bp | ACTGTTACAAGACCCCATTTAAAAAGCTGCAGGTCTAGAAGAAATTCAGTGTTTCAAAGATACCAGTGGTaGTGGAGGCAGCCTGGGCAC | + |
|
Preference number: 4 (lower is better) Translates to: TVTRPHLKSCRSRRNSVFQRYQW*WRQPGH Trigger: GTGCCCAGGCTGCCTCCATCACCACTGGTATCTTTG...AAACACTGAATTTCTTCTAGACCTGCAGCTTTTTAAATGGGGTCTTGTAACAGT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000051869.8 |
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| CDS-3UTR GCA 90 bp | TTTTTGCCACACAGTATTTTAGGATCAAATGTAGTTGGCCACTGTTACAAGACCTTGTGGTATTGGGGGTaGAACCAGTGGAGGGAGGAG | + |
|
Preference number: 4 (lower is better) Translates to: FLPHSILGSNVVGHCYKTLWYWG*NQWREE Trigger: CTCCTCCCTCCACTGGTTGCACCCCCAATACCACAA...GGTCTTGTAACAGTGGCCAACTACATTTGATCCTAAAATACTGTGTGGCAAAAA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000051869.8 |
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| CDS-3UTR CCA 90 bp | TTTTTGCCACACAGTATTTTAGGATCAAATGTAGTTGGCCACTGTTACAAGACCATCGTTTGGTGTGTGTaGCCAACAGAGCCCAGGAGC | + |
|
Preference number: 4 (lower is better) Translates to: FLPHSILGSNVVGHCYKTIVWCV*PTEPRS Trigger: GCTCCTGGGCTCTGTTGGCCACACACACCAAACGAT...GGTCTTGTAACAGTGGCCAACTACATTTGATCCTAAAATACTGTGTGGCAAAAA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000051869.8 |
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| CDS-3UTR CCA 90 bp | ACTGTTACAAGACCCCATTTAAAAAGCTGCAGGTCTAGAAGAAATTCAGTGTTTTCAGCCTGGCCTGCCTaGGGAATCTCATTCCTCTGG | + |
|
Preference number: 4 (lower is better) Translates to: TVTRPHLKSCRSRRNSVFSAWPA*GISFLW Trigger: CCAGAGGAATGAGATTCCCCAGGCAGGCCAGGCTGA...AAACACTGAATTTCTTCTAGACCTGCAGCTTTTTAAATGGGGTCTTGTAACAGT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000051869.8 |
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| CDS-3UTR CCA 90 bp | TTTTTGCCACACAGTATTTTAGGATCAAATGTAGTTGGCCACTGTTACAAGACCAGAAAGAGCTCAGCCTaGCCTGCCTGGGGAATCTCA | + |
|
Preference number: 4 (lower is better) Translates to: FLPHSILGSNVVGHCYKTRKSSA*PAWGIS Trigger: TGAGATTCCCCAGGCAGGCCAGGCTGAGCTCTTTCT...GGTCTTGTAACAGTGGCCAACTACATTTGATCCTAAAATACTGTGTGGCAAAAA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000051869.8 |
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| CDS-3UTR CCA 90 bp | ACTGTTACAAGACCCCATTTAAAAAGCTGCAGGTCTAGAAGAAATTCAGTGTTTCTCTTCTGTGGGAGGTaGGGGGTCAGCAAAGGCAGA | + |
|
Preference number: 4 (lower is better) Translates to: TVTRPHLKSCRSRRNSVFLFCGR*GVSKGR Trigger: TCTGCCTTTGCTGACCCCCCACCTCCCACAGAAGAG...AAACACTGAATTTCTTCTAGACCTGCAGCTTTTTAAATGGGGTCTTGTAACAGT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000051869.8 |
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| CDS-3UTR TCA 90 bp | ACTGTTACAAGACCCCATTTAAAAAGCTGCAGGTCTAGAAGAAATTCAGTGTTTTGCAGTTTTCGAGGCTaGAGCTGGAGCGCCTGGAAA | + |
|
Preference number: 4 (lower is better) Translates to: TVTRPHLKSCRSRRNSVFCSFRG*SWSAWK Trigger: TTTCCAGGCGCTCCAGCTTCAGCCTCGAAAACTGCA...AAACACTGAATTTCTTCTAGACCTGCAGCTTTTTAAATGGGGTCTTGTAACAGT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENSMUST00000051869.8 |
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| CDS-3UTR GCA 90 bp | ACTGTTACAAGACCCCATTTAAAAAGCTGCAGGTCTAGAAGAAATTCAGTGTTTTGGAGCGCCTGGAAATaGGCACCTAGCGTTTGCAGT | + |
|
Preference number: 4 (lower is better) Translates to: TVTRPHLKSCRSRRNSVFWSAWK*APSVCS Trigger: ACTGCAAACGCTAGGTGCGCATTTCCAGGCGCTCCA...AAACACTGAATTTCTTCTAGACCTGCAGCTTTTTAAATGGGGTCTTGTAACAGT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000051869.8 |
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| CDS-3UTR GCA 90 bp | ACTGTTACAAGACCCCATTTAAAAAGCTGCAGGTCTAGAAGAAATTCAGTGTTTAGCCTGGGCACAGGCTaGTTGCTTGCTAGGATAGCA | + |
|
Preference number: 4 (lower is better) Translates to: TVTRPHLKSCRSRRNSVFSLGTG*LLARIA Trigger: TGCTATCCTAGCAAGCAAGCAGCCTGTGCCCAGGCT...AAACACTGAATTTCTTCTAGACCTGCAGCTTTTTAAATGGGGTCTTGTAACAGT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000051869.8 |
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| CDS-3UTR CCA 90 bp | ACTGTTACAAGACCCCATTTAAAAAGCTGCAGGTCTAGAAGAAATTCAGTGTTTGGAATCTCATTCCTCTaGGCAAGGCTGAGGCTGGTG | + |
|
Preference number: 4 (lower is better) Translates to: TVTRPHLKSCRSRRNSVFGISFL*ARLRLV Trigger: CACCAGCCTCAGCCTTGCCCAGAGGAATGAGATTCC...AAACACTGAATTTCTTCTAGACCTGCAGCTTTTTAAATGGGGTCTTGTAACAGT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000051869.8 |
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| CDS-3UTR TCA 90 bp | TTTTTGCCACACAGTATTTTAGGATCAAATGTAGTTGGCCACTGTTACAAGACCGATGTGCTGGCTTCCTaGTCACGGCTCTTTTCTTGT | + |
|
Preference number: 4 (lower is better) Translates to: FLPHSILGSNVVGHCYKTDVLAS*SRLFSC Trigger: ACAAGAAAAGAGCCGTGATCAGGAAGCCAGCACATC...GGTCTTGTAACAGTGGCCAACTACATTTGATCCTAAAATACTGTGTGGCAAAAA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000051869.8 |
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| CDS-3UTR GCA 90 bp | TTTTTGCCACACAGTATTTTAGGATCAAATGTAGTTGGCCACTGTTACAAGACCGTAACAGAATTCCACTaGCCTATGGGTGTCCTGCAG | + |
|
Preference number: 4 (lower is better) Translates to: FLPHSILGSNVVGHCYKTVTEFH*PMGVLQ Trigger: CTGCAGGACACCCATAGGGCAGTGGAATTCTGTTAC...GGTCTTGTAACAGTGGCCAACTACATTTGATCCTAAAATACTGTGTGGCAAAAA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000051869.8 |
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| CDS-3UTR GCA 90 bp | TTTTTGCCACACAGTATTTTAGGATCAAATGTAGTTGGCCACTGTTACAAGACCTGCTGGGTTGATCTCTaGCAATGTCTGGGCATCTGT | + |
|
Preference number: 4 (lower is better) Translates to: FLPHSILGSNVVGHCYKTCWVDL*QCLGIC Trigger: ACAGATGCCCAGACATTGGCAGAGATCAACCCAGCA...GGTCTTGTAACAGTGGCCAACTACATTTGATCCTAAAATACTGTGTGGCAAAAA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000051869.8 |
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| CDS-3UTR CCA 90 bp | TTTTTGCCACACAGTATTTTAGGATCAAATGTAGTTGGCCACTGTTACAAGACCTGTAAGTTGTGGTATTaGGGGTGCAACCAGTGGAGG | + |
|
Preference number: 4 (lower is better) Translates to: FLPHSILGSNVVGHCYKTCKLWY*GCNQWR Trigger: CCTCCACTGGTTGCACCCCCAATACCACAACTTACA...GGTCTTGTAACAGTGGCCAACTACATTTGATCCTAAAATACTGTGTGGCAAAAA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000051869.8 |
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| CDS-3UTR CCA 90 bp | TTTTTGCCACACAGTATTTTAGGATCAAATGTAGTTGGCCACTGTTACAAGACCCTGGAGGTAATGCTGTaGTCCCTCCTGTATCTTGTC | + |
|
Preference number: 4 (lower is better) Translates to: FLPHSILGSNVVGHCYKTLEVML*SLLYLV Trigger: GACAAGATACAGGAGGGACCACAGCATTACCTCCAG...GGTCTTGTAACAGTGGCCAACTACATTTGATCCTAAAATACTGTGTGGCAAAAA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000051869.8 |
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| CDS-3UTR CCA 90 bp | TTTTTGCCACACAGTATTTTAGGATCAAATGTAGTTGGCCACTGTTACAAGACCGCAAAGGCAGAACTGTaGGTGAAGAAGCTGGATTCC | + |
|
Preference number: 4 (lower is better) Translates to: FLPHSILGSNVVGHCYKTAKAEL*VKKLDS Trigger: GGAATCCAGCTTCTTCACCCACAGTTCTGCCTTTGC...GGTCTTGTAACAGTGGCCAACTACATTTGATCCTAAAATACTGTGTGGCAAAAA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000051869.8 |
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| CDS-3UTR GCA 90 bp | TTTTTGCCACACAGTATTTTAGGATCAAATGTAGTTGGCCACTGTTACAAGACCGCTGACGCTTCCACTTaGAGCTGCAATATTTTGTCC | + |
|
Preference number: 4 (lower is better) Translates to: FLPHSILGSNVVGHCYKTADAST*SCNILS Trigger: GGACAAAATATTGCAGCTGCAAGTGGAAGCGTCAGC...GGTCTTGTAACAGTGGCCAACTACATTTGATCCTAAAATACTGTGTGGCAAAAA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000051869.8 |
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| CDS-3UTR GCA 90 bp | ACTGTTACAAGACCCCATTTAAAAAGCTGCAGGTCTAGAAGAAATTCAGTGTTTCAATGCCAGGATTTCTaGCTCCAGGAGCCTGTTTTC | + |
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Preference number: 4 (lower is better) Translates to: TVTRPHLKSCRSRRNSVFQCQDF*LQEPVF Trigger: GAAAACAGGCTCCTGGAGGCAGAAATCCTGGCATTG...AAACACTGAATTTCTTCTAGACCTGCAGCTTTTTAAATGGGGTCTTGTAACAGT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000051869.8 |
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| CDS-3UTR GCA 90 bp | TTTTTGCCACACAGTATTTTAGGATCAAATGTAGTTGGCCACTGTTACAAGACCAGGACTTTCTGCTTCTaGAATGCCAGGATTTCTGCC | + |
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Preference number: 4 (lower is better) Translates to: FLPHSILGSNVVGHCYKTRTFCF*NARISA Trigger: GGCAGAAATCCTGGCATTGCAGAAGCAGAAAGTCCT...GGTCTTGTAACAGTGGCCAACTACATTTGATCCTAAAATACTGTGTGGCAAAAA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000051869.8 |
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| CDS-3UTR CCA 90 bp | ACTGTTACAAGACCCCATTTAAAAAGCTGCAGGTCTAGAAGAAATTCAGTGTTTACTGGACACCATTGGTaGGTACTGGTATTCATGGGC | + |
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Preference number: 4 (lower is better) Translates to: TVTRPHLKSCRSRRNSVFTGHHW*VLVFMG Trigger: GCCCATGAATACCAGTACCCACCAATGGTGTCCAGT...AAACACTGAATTTCTTCTAGACCTGCAGCTTTTTAAATGGGGTCTTGTAACAGT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000051869.8 |
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| CDS-3UTR GCA 90 bp | ACTGTTACAAGACCCCATTTAAAAAGCTGCAGGTCTAGAAGAAATTCAGTGTTTCACTTAGTTTTTCCTTaGGGTTTTGCGACCGCTGCA | + |
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Preference number: 4 (lower is better) Translates to: TVTRPHLKSCRSRRNSVFHLVFP*GFATAA Trigger: TGCAGCGGTCGCAAAACCGCAAGGAAAAACTAAGTG...AAACACTGAATTTCTTCTAGACCTGCAGCTTTTTAAATGGGGTCTTGTAACAGT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt. Matches the following 1 transcripts: ENSMUST00000051869.8 |
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| CDS-3UTR GCA 90 bp | ACTGTTACAAGACCCCATTTAAAAAGCTGCAGGTCTAGAAGAAATTCAGTGTTTTTTCTGCTTCTGCAATaGCAGGATTTCTGCCTCCAG | + |
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Preference number: 4 (lower is better) Translates to: TVTRPHLKSCRSRRNSVFFLLLQ*QDFCLQ Trigger: CTGGAGGCAGAAATCCTGGCATTGCAGAAGCAGAAA...AAACACTGAATTTCTTCTAGACCTGCAGCTTTTTAAATGGGGTCTTGTAACAGT 41% GC, longest homopolymer 6 nt, total homopolymer stretches 15 nt. Matches the following 1 transcripts: ENSMUST00000051869.8 |
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| CDS-3UTR CCA 90 bp | TTTTTGCCACACAGTATTTTAGGATCAAATGTAGTTGGCCACTGTTACAAGACCGTCTTTGAAGTGCCATaGAAGTTCTGGGCTTTTGTG | + |
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Preference number: 4 (lower is better) Translates to: FLPHSILGSNVVGHCYKTVFEVP*KFWAFV Trigger: CACAAAAGCCCAGAACTTCCATGGCACTTCAAAGAC...GGTCTTGTAACAGTGGCCAACTACATTTGATCCTAAAATACTGTGTGGCAAAAA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000051869.8 |
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| CDS-3UTR CCA 90 bp | ACTGTTACAAGACCCCATTTAAAAAGCTGCAGGTCTAGAAGAAATTCAGTGTTTGCAGGTAGGAGGAAGTaGAGATCCAGACCCATTTTT | + |
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Preference number: 4 (lower is better) Translates to: TVTRPHLKSCRSRRNSVFAGRRK*RSRPIF Trigger: AAAAATGGGTCTGGATCTCCACTTCCTCCTACCTGC...AAACACTGAATTTCTTCTAGACCTGCAGCTTTTTAAATGGGGTCTTGTAACAGT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000051869.8 |
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| CDS-3UTR CCA 90 bp | TTTTTGCCACACAGTATTTTAGGATCAAATGTAGTTGGCCACTGTTACAAGACCATCTCTGCCAATGTCTaGGCATCTGTATCTCTTGCA | + |
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Preference number: 4 (lower is better) Translates to: FLPHSILGSNVVGHCYKTISANV*ASVSLA Trigger: TGCAAGAGATACAGATGCCCAGACATTGGCAGAGAT...GGTCTTGTAACAGTGGCCAACTACATTTGATCCTAAAATACTGTGTGGCAAAAA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000051869.8 |
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| CDS-3UTR CCA 90 bp | ACTGTTACAAGACCCCATTTAAAAAGCTGCAGGTCTAGAAGAAATTCAGTGTTTGGGTACTGGTATTCATaGGCATTTGCTGGGTTGATC | + |
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Preference number: 4 (lower is better) Translates to: TVTRPHLKSCRSRRNSVFGYWYS*AFAGLI Trigger: GATCAACCCAGCAAATGCCCATGAATACCAGTACCC...AAACACTGAATTTCTTCTAGACCTGCAGCTTTTTAAATGGGGTCTTGTAACAGT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000051869.8 |
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| CDS-3UTR CCA 90 bp | TTTTTGCCACACAGTATTTTAGGATCAAATGTAGTTGGCCACTGTTACAAGACCACCATTGGTGGGTACTaGTATTCATGGGCATTTGCT | + |
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Preference number: 4 (lower is better) Translates to: FLPHSILGSNVVGHCYKTTIGGY*YSWAFA Trigger: AGCAAATGCCCATGAATACCAGTACCCACCAATGGT...GGTCTTGTAACAGTGGCCAACTACATTTGATCCTAAAATACTGTGTGGCAAAAA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000051869.8 |
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| CDS-3UTR GCA 90 bp | ACTGTTACAAGACCCCATTTAAAAAGCTGCAGGTCTAGAAGAAATTCAGTGTTTAGACTCAGGACTTTCTaGTTCTGCAATGCCAGGATT | + |
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Preference number: 4 (lower is better) Translates to: TVTRPHLKSCRSRRNSVFRLRTF*FCNARI Trigger: AATCCTGGCATTGCAGAAGCAGAAAGTCCTGAGTCT...AAACACTGAATTTCTTCTAGACCTGCAGCTTTTTAAATGGGGTCTTGTAACAGT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000051869.8 |
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| CDS-3UTR GCA 90 bp | ACTGTTACAAGACCCCATTTAAAAAGCTGCAGGTCTAGAAGAAATTCAGTGTTTGTATTCATGGGCATTTaGTGGGTTGATCTCTGCCAA | + |
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Preference number: 4 (lower is better) Translates to: TVTRPHLKSCRSRRNSVFVFMGI*WVDLCQ Trigger: TTGGCAGAGATCAACCCAGCAAATGCCCATGAATAC...AAACACTGAATTTCTTCTAGACCTGCAGCTTTTTAAATGGGGTCTTGTAACAGT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000051869.8 |
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| CDS-3UTR CCA 90 bp | TTTTTGCCACACAGTATTTTAGGATCAAATGTAGTTGGCCACTGTTACAAGACCAGCACCCTCAGATCTTaGTCAAATAGCAATAGTGAG | + |
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Preference number: 4 (lower is better) Translates to: FLPHSILGSNVVGHCYKTSTLRS*SNSNSE Trigger: CTCACTATTGCTATTTGACCAAGATCTGAGGGTGCT...GGTCTTGTAACAGTGGCCAACTACATTTGATCCTAAAATACTGTGTGGCAAAAA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000051869.8 |
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| CDS-3UTR CCA 90 bp | ACTGTTACAAGACCCCATTTAAAAAGCTGCAGGTCTAGAAGAAATTCAGTGTTTTTCATGGGCATTTGCTaGGTTGATCTCTGCCAATGT | + |
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Preference number: 4 (lower is better) Translates to: TVTRPHLKSCRSRRNSVFFMGIC*VDLCQC Trigger: ACATTGGCAGAGATCAACCCAGCAAATGCCCATGAA...AAACACTGAATTTCTTCTAGACCTGCAGCTTTTTAAATGGGGTCTTGTAACAGT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000051869.8 |
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| CDS-3UTR GCA 90 bp | ACTGTTACAAGACCCCATTTAAAAAGCTGCAGGTCTAGAAGAAATTCAGTGTTTGGCATCTGTATCTCTTaGATTTACCAGCCTCAGAAA | + |
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Preference number: 4 (lower is better) Translates to: TVTRPHLKSCRSRRNSVFGICIS*IYQPQK Trigger: TTTCTGAGGCTGGTAAATGCAAGAGATACAGATGCC...AAACACTGAATTTCTTCTAGACCTGCAGCTTTTTAAATGGGGTCTTGTAACAGT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000051869.8 |
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| CDS-3UTR TCA 90 bp | TTTTTGCCACACAGTATTTTAGGATCAAATGTAGTTGGCCACTGTTACAAGACCATTAAGTATAGTCTTTaGAGTGCCATGGAAGTTCTG | + |
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Preference number: 4 (lower is better) Translates to: FLPHSILGSNVVGHCYKTIKYSL*SAMEVL Trigger: CAGAACTTCCATGGCACTTCAAAGACTATACTTAAT...GGTCTTGTAACAGTGGCCAACTACATTTGATCCTAAAATACTGTGTGGCAAAAA 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000051869.8 |
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| CDS GCA 90 bp | CAGCGTTTCCGGGTTGAACCGCAGGGGCAGGTAACAGAATTCCACTaGCCTATGGGTGTCCTGCAGTTTTCGAGGCTGAAGCTGGAGCGC | + |
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Preference number: 5 (lower is better) Translates to: QRFRVEPQGQVTEFH*PMGVLQFSRLKLER Trigger: GCGCTCCAGCTTCAGCCTCGAAAACTGCAGGACACCCATAGGGCAGTGGAATTCTGTTACCTGCCCCTGCGGTTCAACCCGGAAACGCTG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000051869.8 |
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| CDS GCA 90 bp | CCTGGATCCCCAGGGCGACAGACTCAGGACTTTCTGCTTCTGCAATaGCAGGATTTCTGCCTCCAGGAGCCTGTTTTCGGCTTCCACCGT | + |
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Preference number: 5 (lower is better) Translates to: PGSPGRQTQDFLLLQ*QDFCLQEPVFGFHR Trigger: ACGGTGGAAGCCGAAAACAGGCTCCTGGAGGCAGAAATCCTGGCATTGCAGAAGCAGAAAGTCCTGAGTCTGTCGCCCTGGGGATCCAGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000051869.8 |
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| CDS CCA 90 bp | GGAGGAGGGAGTTATCACACCTACTCAGGTGTCCGGGGAGATCCCTaGATCCCCAGGGCGACAGACTCAGGACTTTCTGCTTCTGCAATG | + |
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Preference number: 5 (lower is better) Translates to: GGGSYHTYSGVRGDP*IPRATDSGLSASAM Trigger: CATTGCAGAAGCAGAAAGTCCTGAGTCTGTCGCCCTGGGGATCCAGGGATCTCCCCGGACACCTGAGTAGGTGTGATAACTCCCTCCTCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000051869.8 |
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| CDS GCA 90 bp | TTTTGCGACCGCTGCAATTCCAGGGCTGACGCTTCCACTTGCAGCTaGAATATTTTGTCCAGAACTTCTGGGTCCCGGCCTCCACCGTGC | + |
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Preference number: 5 (lower is better) Translates to: FCDRCNSRADASTCS*NILSRTSGSRPPPC Trigger: GCACGGTGGAGGCCGGGACCCAGAAGTTCTGGACAAAATATTGCAGCTGCAAGTGGAAGCGTCAGCCCTGGAATTGCAGCGGTCGCAAAA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000051869.8 |
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| CDS GCA 90 bp | CAGATCAAAGATACCAGTGGTGATGGAGGCAGCCTGGGCACAGGCTaGTTGCTTGCTAGGATAGCACAGTTGCCCATAGGTCCAGGAGCT | + |
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Preference number: 5 (lower is better) Translates to: QIKDTSGDGGSLGTG*LLARIAQLPIGPGA Trigger: AGCTCCTGGACCTATGGGCAACTGTGCTATCCTAGCAAGCAAGCAGCCTGTGCCCAGGCTGCCTCCATCACCACTGGTATCTTTGATCTG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000051869.8 |
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| CDS CCA 90 bp | GCATCTGTATCTCTTGCATTTACCAGCCTCAGAAAGAGCTCAGCCTaGCCTGCCTGGGGAATCTCATTCCTCTGGGCAAGGCTGAGGCTG | + |
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Preference number: 5 (lower is better) Translates to: ASVSLAFTSLRKSSA*PAWGISFLWARLRL Trigger: CAGCCTCAGCCTTGCCCAGAGGAATGAGATTCCCCAGGCAGGCCAGGCTGAGCTCTTTCTGAGGCTGGTAAATGCAAGAGATACAGATGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000051869.8 |
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| CDS GCA 90 bp | CTTCCACCGTTAGAACCTCCTCAGAGGCGGCACTTAGTTTTTCCTTaGGGTTTTGCGACCGCTGCAATTCCAGGGCTGACGCTTCCACTT | + |
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Preference number: 5 (lower is better) Translates to: LPPLEPPQRRHLVFP*GFATAAIPGLTLPL Trigger: AAGTGGAAGCGTCAGCCCTGGAATTGCAGCGGTCGCAAAACCGCAAGGAAAAACTAAGTGCCGCCTCTGAGGAGGTTCTAACGGTGGAAG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000051869.8 |
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| CDS CCA 90 bp | TTACCTCCGGAGTCAGCCGGCCAATGCAGAATCGTTTGGTGTGTGTaGCCAACAGAGCCCAGGAGCGGAAAACCATATCACAGGATTCAC | + |
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Preference number: 5 (lower is better) Translates to: LPPESAGQCRIVWCV*PTEPRSGKPYHRIH Trigger: GTGAATCCTGTGATATGGTTTTCCGCTCCTGGGCTCTGTTGGCCACACACACCAAACGATTCTGCATTGGCCGGCTGACTCCGGAGGTAA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000051869.8 |
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| CDS CCA 90 bp | GTAATGCTGTGGTCCCTCCTGTATCTTGTCCATTCCGGGCCAAGCTaGTCATTAGCTGTACCCATATCCAAGAAGTGTCAAGGCCCCGCA | + |
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Preference number: 5 (lower is better) Translates to: VMLWSLLYLVHSGPS*SLAVPISKKCQGPA Trigger: TGCGGGGCCTTGACACTTCTTGGATATGGGTACAGCTAATGACCAGCTTGGCCCGGAATGGACAAGATACAGGAGGGACCACAGCATTAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000051869.8 |
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| CDS TCA 90 bp | GCAGTCTCCTCTGTCAGCCTCTTTAGAGCAGATGTGCTGGCTTCCTaGTCACGGCTCTTTTCTTGTGCCATGATCTTGGTGCCTCGTTTG | + |
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Preference number: 5 (lower is better) Translates to: AVSSVSLFRADVLAS*SRLFSCAMILVPRL Trigger: CAAACGAGGCACCAAGATCATGGCACAAGAAAAGAGCCGTGATCAGGAAGCCAGCACATCTGCTCTAAAGAGGCTGACAGAGGAGACTGC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000051869.8 |
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| CDS CCA 90 bp | GCCATGGAAGTTCTGGGCTTTTGTGGAACTTGTAAGTTGTGGTATTaGGGGTGCAACCAGTGGAGGGAGGAGGGAGTTATCACACCTACT | + |
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Preference number: 5 (lower is better) Translates to: AMEVLGFCGTCKLWY*GCNQWREEGVITPT Trigger: AGTAGGTGTGATAACTCCCTCCTCCCTCCACTGGTTGCACCCCCAATACCACAACTTACAAGTTCCACAAAAGCCCAGAACTTCCATGGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000051869.8 |
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| CDS GCA 90 bp | AATAGTGAGGCCCAAGCCTTTGGTTGTGGTGCCCATGTAACTCCATaGCAGGCCTGTAGTTCACAGATCAAAGATACCAGTGGTGATGGA | + |
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Preference number: 5 (lower is better) Translates to: NSEAQAFGCGAHVTP*QACSSQIKDTSGDG Trigger: TCCATCACCACTGGTATCTTTGATCTGTGAACTACAGGCCTGGCATGGAGTTACATGGGCACCACAACCAAAGGCTTGGGCCTCACTATT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000051869.8 |
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| CDS GCA 90 bp | CATTGGTGGGTACTGGTATTCATGGGCATTTGCTGGGTTGATCTCTaGCAATGTCTGGGCATCTGTATCTCTTGCATTTACCAGCCTCAG | + |
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Preference number: 5 (lower is better) Translates to: HWWVLVFMGICWVDL*QCLGICISCIYQPQ Trigger: CTGAGGCTGGTAAATGCAAGAGATACAGATGCCCAGACATTGGCAGAGATCAACCCAGCAAATGCCCATGAATACCAGTACCCACCAATG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000051869.8 |
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| CDS CCA 90 bp | GATTCCACAGATGAACTGGACACCATTGGTGGGTACTGGTATTCATaGGCATTTGCTGGGTTGATCTCTGCCAATGTCTGGGCATCTGTA | + |
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Preference number: 5 (lower is better) Translates to: DSTDELDTIGGYWYS*AFAGLISANVWASV Trigger: TACAGATGCCCAGACATTGGCAGAGATCAACCCAGCAAATGCCCATGAATACCAGTACCCACCAATGGTGTCCAGTTCATCTGTGGAATC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000051869.8 |
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| CDS CCA 90 bp | AAGAAGCTGGATTCCACAGATGAACTGGACACCATTGGTGGGTACTaGTATTCATGGGCATTTGCTGGGTTGATCTCTGCCAATGTCTGG | + |
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Preference number: 5 (lower is better) Translates to: KKLDSTDELDTIGGY*YSWAFAGLISANVW Trigger: CCAGACATTGGCAGAGATCAACCCAGCAAATGCCCATGAATACCAGTACCCACCAATGGTGTCCAGTTCATCTGTGGAATCCAGCTTCTT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000051869.8 |
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| CDS TCA 90 bp | TGGACACCATTGGTGGGTACTGGTATTCATGGGCATTTGCTGGGTTaGTCTCTGCCAATGTCTGGGCATCTGTATCTCTTGCATTTACCA | + |
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Preference number: 5 (lower is better) Translates to: WTPLVGTGIHGHLLG*SLPMSGHLYLLHLP Trigger: TGGTAAATGCAAGAGATACAGATGCCCAGACATTGGCAGAGATCAACCCAGCAAATGCCCATGAATACCAGTACCCACCAATGGTGTCCA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000051869.8 |
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| CDS-3UTR CAA 90 bp | TTTTTGCCACACAGTATTTTAGGATCAAATGTAGTTGGCCACTGTTACAAGACCCGGTTGGCCTCTTCCTaGAGTTCTCTGAGCTCGCGC | + |
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Preference number: 5 (lower is better) Translates to: FLPHSILGSNVVGHCYKTRLASS*SSLSSR Trigger: GCGCGAGCTCAGAGAACTCAAGGAAGAGGCCAACCG...GGTCTTGTAACAGTGGCCAACTACATTTGATCCTAAAATACTGTGTGGCAAAAA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000051869.8 |
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| CDS CCA 90 bp | TACTGGTATTCATGGGCATTTGCTGGGTTGATCTCTGCCAATGTCTaGGCATCTGTATCTCTTGCATTTACCAGCCTCAGAAAGAGCTCA | + |
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Preference number: 5 (lower is better) Translates to: YWYSWAFAGLISANV*ASVSLAFTSLRKSS Trigger: TGAGCTCTTTCTGAGGCTGGTAAATGCAAGAGATACAGATGCCCAGACATTGGCAGAGATCAACCCAGCAAATGCCCATGAATACCAGTA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000051869.8 |
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| CDS-3UTR CAA 90 bp | TTTTTGCCACACAGTATTTTAGGATCAAATGTAGTTGGCCACTGTTACAAGACCGGCCCAAGCCTTTGGTaGTGGTGCCCATGTAACTCC | + |
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Preference number: 5 (lower is better) Translates to: FLPHSILGSNVVGHCYKTGPSLW*WCPCNS Trigger: GGAGTTACATGGGCACCACAACCAAAGGCTTGGGCC...GGTCTTGTAACAGTGGCCAACTACATTTGATCCTAAAATACTGTGTGGCAAAAA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000051869.8 |
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| CDS-3UTR CAA 90 bp | TTTTTGCCACACAGTATTTTAGGATCAAATGTAGTTGGCCACTGTTACAAGACCGCTAGGATAGCACAGTaGCCCATAGGTCCAGGAGCT | + |
|
Preference number: 5 (lower is better) Translates to: FLPHSILGSNVVGHCYKTARIAQ*PIGPGA Trigger: AGCTCCTGGACCTATGGGCAACTGTGCTATCCTAGC...GGTCTTGTAACAGTGGCCAACTACATTTGATCCTAAAATACTGTGTGGCAAAAA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000051869.8 |
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| CDS-3UTR CAA 90 bp | TTTTTGCCACACAGTATTTTAGGATCAAATGTAGTTGGCCACTGTTACAAGACCTGGGCATTTGCTGGGTaGATCTCTGCCAATGTCTGG | + |
|
Preference number: 5 (lower is better) Translates to: FLPHSILGSNVVGHCYKTWAFAG*ISANVW Trigger: CCAGACATTGGCAGAGATCAACCCAGCAAATGCCCA...GGTCTTGTAACAGTGGCCAACTACATTTGATCCTAAAATACTGTGTGGCAAAAA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000051869.8 |
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| CDS-3UTR CAA 90 bp | TTTTTGCCACACAGTATTTTAGGATCAAATGTAGTTGGCCACTGTTACAAGACCCCAATGCAGAATCGTTaGGTGTGTGTGGCCAACAGA | + |
|
Preference number: 5 (lower is better) Translates to: FLPHSILGSNVVGHCYKTPMQNR*VCVANR Trigger: TCTGTTGGCCACACACACCAAACGATTCTGCATTGG...GGTCTTGTAACAGTGGCCAACTACATTTGATCCTAAAATACTGTGTGGCAAAAA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000051869.8 |
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| CDS-3UTR CAA 90 bp | TTTTTGCCACACAGTATTTTAGGATCAAATGTAGTTGGCCACTGTTACAAGACCATGAACTGGACACCATaGGTGGGTACTGGTATTCAT | + |
|
Preference number: 5 (lower is better) Translates to: FLPHSILGSNVVGHCYKTMNWTP*VGTGIH Trigger: ATGAATACCAGTACCCACCAATGGTGTCCAGTTCAT...GGTCTTGTAACAGTGGCCAACTACATTTGATCCTAAAATACTGTGTGGCAAAAA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000051869.8 |
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| CDS GCA 72 bp | GCTCCAGCGCCCGGCTCTGTGCTTCTGTTTCTGCCATaGGTCTGGCGCGGGTTCCCTGCAAGACTCGCAGCC | + |
|
Preference number: 6 (lower is better) Translates to: APAPGSVLLFLP*VWRGFPARLAA Trigger: GGCTGCGAGTCTTGCAGGGAACCCGCGCCAGACGCATGGCAGAAACAGAAGCACAGAGCCGGGCGCTGGAGC 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000051869.8 |
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| CDS GCA 72 bp | GCGACGCTCCAGCGCCCGGCTCTGTGCTTCTGTTTCTaGCATGCGTCTGGCGCGGGTTCCCTGCAAGACTCG | + |
|
Preference number: 6 (lower is better) Translates to: ATLQRPALCFCF*HASGAGSLQDS Trigger: CGAGTCTTGCAGGGAACCCGCGCCAGACGCATGGCAGAAACAGAAGCACAGAGCCGGGCGCTGGAGCGTCGC 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000051869.8 |
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| CDS CCA 72 bp | GCGCCCGGCTCTGTGCTTCTGTTTCTGCCATGCGTCTaGCGCGGGTTCCCTGCAAGACTCGCAGCCTCTCCC | + |
|
Preference number: 6 (lower is better) Translates to: APGSVLLFLPCV*RGFPARLAASP Trigger: GGGAGAGGCTGCGAGTCTTGCAGGGAACCCGCGCCAGACGCATGGCAGAAACAGAAGCACAGAGCCGGGCGC 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000051869.8 |
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| CDS CAA 72 bp | TGCGCACCTAGCGTTTGCAGTGCTCCCCGGGTCCGGTaGGCCTCTTCCTTGAGTTCTCTGAGCTCGCGCTCC | + |
|
Preference number: 6 (lower is better) Translates to: CAPSVCSAPRVR*ASSLSSLSSRS Trigger: GGAGCGCGAGCTCAGAGAACTCAAGGAAGAGGCCAACCGGACCCGGGGAGCACTGCAAACGCTAGGTGCGCA 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000051869.8 |
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| CDS CCA 72 bp | GGCAAGGCTGAGGCTGGTGTTAGGATAGACCCGAAGTaGGAGGCGCCAACGGCCCCTAAGCACCCTCAGATC | + |
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Preference number: 6 (lower is better) Translates to: GKAEAGVRIDPK*EAPTAPKHPQI Trigger: GATCTGAGGGTGCTTAGGGGCCGTTGGCGCCTCCCACTTCGGGTCTATCCTAACACCAGCCTCAGCCTTGCC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000051869.8 |
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| CDS CAA 90 bp | GCCTGGAAATGCGCACCTAGCGTTTGCAGTGCTCCCCGGGTCCGGTaGGCCTCTTCCTTGAGTTCTCTGAGCTCGCGCTCCAAGTCGAAT | + |
|
Preference number: 6 (lower is better) Translates to: AWKCAPSVCSAPRVR*ASSLSSLSSRSKSN Trigger: ATTCGACTTGGAGCGCGAGCTCAGAGAACTCAAGGAAGAGGCCAACCGGACCCGGGGAGCACTGCAAACGCTAGGTGCGCATTTCCAGGC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000051869.8 |
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| CDS TCA 72 bp | TCCACTGCCCTATGGGTGTCCTGCAGTTTTCGAGGCTaGAGCTGGAGCGCCTGGAAATGCGCACCTAGCGTT | + |
|
Preference number: 6 (lower is better) Translates to: STALWVSCSFRG*SWSAWKCAPSV Trigger: AACGCTAGGTGCGCATTTCCAGGCGCTCCAGCTTCAGCCTCGAAAACTGCAGGACACCCATAGGGCAGTGGA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000051869.8 |
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| CDS GCA 72 bp | TCCCTGGATCCCCAGGGCGACAGACTCAGGACTTTCTaGTTCTGCAATGCCAGGATTTCTGCCTCCAGGAGC | + |
|
Preference number: 6 (lower is better) Translates to: SLDPQGDRLRTF*FCNARISASRS Trigger: GCTCCTGGAGGCAGAAATCCTGGCATTGCAGAAGCAGAAAGTCCTGAGTCTGTCGCCCTGGGGATCCAGGGA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000051869.8 |
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| CDS CAA 72 bp | TCCAGGGCTGACGCTTCCACTTGCAGCTGCAATATTTaGTCCAGAACTTCTGGGTCCCGGCCTCCACCGTGC | + |
|
Preference number: 6 (lower is better) Translates to: SRADASTCSCNI*SRTSGSRPPPC Trigger: GCACGGTGGAGGCCGGGACCCAGAAGTTCTGGACAAAATATTGCAGCTGCAAGTGGAAGCGTCAGCCCTGGA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000051869.8 |
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| CDS GCA 72 bp | CGGGTTGAACCGCAGGGGCAGGTAACAGAATTCCACTaGCCTATGGGTGTCCTGCAGTTTTCGAGGCTGAAG | + |
|
Preference number: 6 (lower is better) Translates to: RVEPQGQVTEFH*PMGVLQFSRLK Trigger: CTTCAGCCTCGAAAACTGCAGGACACCCATAGGGCAGTGGAATTCTGTTACCTGCCCCTGCGGTTCAACCCG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000051869.8 |
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| CDS CCA 72 bp | TTACCTCCGGAGTCAGCCGGCCAATGCAGAATCGTTTaGTGTGTGTGGCCAACAGAGCCCAGGAGCGGAAAA | + |
|
Preference number: 6 (lower is better) Translates to: LPPESAGQCRIV*CVWPTEPRSGK Trigger: TTTTCCGCTCCTGGGCTCTGTTGGCCACACACACCAAACGATTCTGCATTGGCCGGCTGACTCCGGAGGTAA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000051869.8 |
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| CDS CCA 72 bp | AGTTATCACACCTACTCAGGTGTCCGGGGAGATCCCTaGATCCCCAGGGCGACAGACTCAGGACTTTCTGCT | + |
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Preference number: 6 (lower is better) Translates to: SYHTYSGVRGDP*IPRATDSGLSA Trigger: AGCAGAAAGTCCTGAGTCTGTCGCCCTGGGGATCCAGGGATCTCCCCGGACACCTGAGTAGGTGTGATAACT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000051869.8 |
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| CDS CAA 90 bp | GCTTCCACCGTTAGAACCTCCTCAGAGGCGGCACTTAGTTTTTCCTaGCGGTTTTGCGACCGCTGCAATTCCAGGGCTGACGCTTCCACT | + |
|
Preference number: 6 (lower is better) Translates to: ASTVRTSSEAALSFS*RFCDRCNSRADAST Trigger: AGTGGAAGCGTCAGCCCTGGAATTGCAGCGGTCGCAAAACCGCAAGGAAAAACTAAGTGCCGCCTCTGAGGAGGTTCTAACGGTGGAAGC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000051869.8 |
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| CDS GCA 72 bp | CGCTGCAATTCCAGGGCTGACGCTTCCACTTGCAGCTaGAATATTTTGTCCAGAACTTCTGGGTCCCGGCCT | + |
|
Preference number: 6 (lower is better) Translates to: RCNSRADASTCS*NILSRTSGSRP Trigger: AGGCCGGGACCCAGAAGTTCTGGACAAAATATTGCAGCTGCAAGTGGAAGCGTCAGCCCTGGAATTGCAGCG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000051869.8 |
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| CDS CCA 72 bp | GAGTCAGCCGGCCAATGCAGAATCGTTTGGTGTGTGTaGCCAACAGAGCCCAGGAGCGGAAAACCATATCAC | + |
|
Preference number: 6 (lower is better) Translates to: ESAGQCRIVWCV*PTEPRSGKPYH Trigger: GTGATATGGTTTTCCGCTCCTGGGCTCTGTTGGCCACACACACCAAACGATTCTGCATTGGCCGGCTGACTC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000051869.8 |
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| CDS TCA 72 bp | TTCCTTGCGGTTTTGCGACCGCTGCAATTCCAGGGCTaGCGCTTCCACTTGCAGCTGCAATATTTTGTCCAG | + |
|
Preference number: 6 (lower is better) Translates to: FLAVLRPLQFQG*RFHLQLQYFVQ Trigger: CTGGACAAAATATTGCAGCTGCAAGTGGAAGCGTCAGCCCTGGAATTGCAGCGGTCGCAAAACCGCAAGGAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000051869.8 |
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| CDS CCA 72 bp | GGAACTTGTAAGTTGTGGTATTGGGGGTGCAACCAGTaGAGGGAGGAGGGAGTTATCACACCTACTCAGGTG | + |
|
Preference number: 6 (lower is better) Translates to: GTCKLWYWGCNQ*REEGVITPTQV Trigger: CACCTGAGTAGGTGTGATAACTCCCTCCTCCCTCCACTGGTTGCACCCCCAATACCACAACTTACAAGTTCC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000051869.8 |
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| CDS CAA 72 bp | AGCAGATGTGCTGGCTTCCTGATCACGGCTCTTTTCTaGTGCCATGATCTTGGTGCCTCGTTTGATCGCGAC | + |
|
Preference number: 6 (lower is better) Translates to: SRCAGFLITALF*CHDLGASFDRD Trigger: GTCGCGATCAAACGAGGCACCAAGATCATGGCACAAGAAAAGAGCCGTGATCAGGAAGCCAGCACATCTGCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000051869.8 |
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| CDS CAA 72 bp | GCCATGGAAGTTCTGGGCTTTTGTGGAACTTGTAAGTaGTGGTATTGGGGGTGCAACCAGTGGAGGGAGGAG | + |
|
Preference number: 6 (lower is better) Translates to: AMEVLGFCGTCK*WYWGCNQWREE Trigger: CTCCTCCCTCCACTGGTTGCACCCCCAATACCACAACTTACAAGTTCCACAAAAGCCCAGAACTTCCATGGC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000051869.8 |
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| CDS CAA 90 bp | GATTTAAGTGTTACCTCCGGAGTCAGCCGGCCAATGCAGAATCGTTaGGTGTGTGTGGCCAACAGAGCCCAGGAGCGGAAAACCATATCA | + |
|
Preference number: 6 (lower is better) Translates to: DLSVTSGVSRPMQNR*VCVANRAQERKTIS Trigger: TGATATGGTTTTCCGCTCCTGGGCTCTGTTGGCCACACACACCAAACGATTCTGCATTGGCCGGCTGACTCCGGAGGTAACACTTAAATC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000051869.8 |
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| CDS GCA 72 bp | GCCCAAGCCTTTGGTTGTGGTGCCCATGTAACTCCATaGCAGGCCTGTAGTTCACAGATCAAAGATACCAGT | + |
|
Preference number: 6 (lower is better) Translates to: AQAFGCGAHVTP*QACSSQIKDTS Trigger: ACTGGTATCTTTGATCTGTGAACTACAGGCCTGGCATGGAGTTACATGGGCACCACAACCAAAGGCTTGGGC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000051869.8 |
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| CDS GCA 72 bp | GTTGATCTCTGCCAATGTCTGGGCATCTGTATCTCTTaGATTTACCAGCCTCAGAAAGAGCTCAGCCTGGCC | + |
|
Preference number: 6 (lower is better) Translates to: VDLCQCLGICIS*IYQPQKELSLA Trigger: GGCCAGGCTGAGCTCTTTCTGAGGCTGGTAAATGCAAGAGATACAGATGCCCAGACATTGGCAGAGATCAAC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000051869.8 |
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| CDS GCA 72 bp | GGACACCATTGGTGGGTACTGGTATTCATGGGCATTTaGTGGGTTGATCTCTGCCAATGTCTGGGCATCTGT | + |
|
Preference number: 6 (lower is better) Translates to: GHHWWVLVFMGI*WVDLCQCLGIC Trigger: ACAGATGCCCAGACATTGGCAGAGATCAACCCAGCAAATGCCCATGAATACCAGTACCCACCAATGGTGTCC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000051869.8 |
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| CDS CCA 72 bp | GTTCTGGGCTTTTGTGGAACTTGTAAGTTGTGGTATTaGGGGTGCAACCAGTGGAGGGAGGAGGGAGTTATC | + |
|
Preference number: 6 (lower is better) Translates to: VLGFCGTCKLWY*GCNQWREEGVI Trigger: GATAACTCCCTCCTCCCTCCACTGGTTGCACCCCCAATACCACAACTTACAAGTTCCACAAAAGCCCAGAAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000051869.8 |
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| CDS CCA 72 bp | ATGGAAGTTCTGGGCTTTTGTGGAACTTGTAAGTTGTaGTATTGGGGGTGCAACCAGTGGAGGGAGGAGGGA | + |
|
Preference number: 6 (lower is better) Translates to: MEVLGFCGTCKL*YWGCNQWREEG Trigger: TCCCTCCTCCCTCCACTGGTTGCACCCCCAATACCACAACTTACAAGTTCCACAAAAGCCCAGAACTTCCAT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000051869.8 |
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| CDS CCA 72 bp | GATGAACTGGACACCATTGGTGGGTACTGGTATTCATaGGCATTTGCTGGGTTGATCTCTGCCAATGTCTGG | + |
|
Preference number: 6 (lower is better) Translates to: DELDTIGGYWYS*AFAGLISANVW Trigger: CCAGACATTGGCAGAGATCAACCCAGCAAATGCCCATGAATACCAGTACCCACCAATGGTGTCCAGTTCATC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000051869.8 |
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| CDS CCA 72 bp | GCTGGACCTAGAACATCTGATGCAGGTAGGAGGAAGTaGAGATCCAGACCCATTTTTCTTGTCATGGTTCCA | + |
|
Preference number: 6 (lower is better) Translates to: AGPRTSDAGRRK*RSRPIFLVMVP Trigger: TGGAACCATGACAAGAAAAATGGGTCTGGATCTCCACTTCCTCCTACCTGCATCAGATGTTCTAGGTCCAGC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000051869.8 |
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| CDS CCA 72 bp | TCATGGGCATTTGCTGGGTTGATCTCTGCCAATGTCTaGGCATCTGTATCTCTTGCATTTACCAGCCTCAGA | + |
|
Preference number: 6 (lower is better) Translates to: SWAFAGLISANV*ASVSLAFTSLR Trigger: TCTGAGGCTGGTAAATGCAAGAGATACAGATGCCCAGACATTGGCAGAGATCAACCCAGCAAATGCCCATGA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000051869.8 |
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| CDS GCA 72 bp | GTACTGGTATTCATGGGCATTTGCTGGGTTGATCTCTaGCAATGTCTGGGCATCTGTATCTCTTGCATTTAC | + |
|
Preference number: 6 (lower is better) Translates to: VLVFMGICWVDL*QCLGICISCIY Trigger: GTAAATGCAAGAGATACAGATGCCCAGACATTGGCAGAGATCAACCCAGCAAATGCCCATGAATACCAGTAC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000051869.8 |
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| CDS CCA 72 bp | GTCATGGTTCCATTAAGTATAGTCTTTGAAGTGCCATaGAAGTTCTGGGCTTTTGTGGAACTTGTAAGTTGT | + |
|
Preference number: 6 (lower is better) Translates to: VMVPLSIVFEVP*KFWAFVELVSC Trigger: ACAACTTACAAGTTCCACAAAAGCCCAGAACTTCCATGGCACTTCAAAGACTATACTTAATGGAACCATGAC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000051869.8 |
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