Pregenerated sensors for CCDC169 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000048655Ensembl transcript IDs: ENSMUST00000052904.11, ENSMUST00000061099.14, ENSMUST00000118963.9, ENSMUST00000159904.8, ENSMUST00000161120.2
Found 92 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | CTTGGAACCTTTTTAACTGGTCCTTTCTTGGCATTTGTTGTCTTCTaGTTCATGGAATTGTGTCTTCCAGTTTTCACCGGACTTTCCTTC | + |
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Preference number: 1 (lower is better) Translates to: LGTFLTGPFLAFVVF*FMELCLPVFTGLSF Trigger: GAAGGAAAGTCCGGTGAAAACTGGAAGACACAATTCCATGAATCAGAAGACAACAAATGCCAAGAAAGGACCAGTTAAAAAGGTTCCAAG 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000159904.8 ENSMUST00000161120.2 |
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| 3UTR CAA 90 bp | CTAGGGGTGAGGCCCATGTGTCCCTCTGCCACTGGAGCTGGAATGTaGGCTAGCTTGATCTTGAGCAGGTTTTGTGCAGGCAACCATAGC | + |
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Preference number: 2 (lower is better) Translates to: LGVRPMCPSATGAGM*ASLILSRFCAGNHS Trigger: GCTATGGTTGCCTGCACAAAACCTGCTCAAGATCAAGCTAGCCAACATTCCAGCTCCAGTGGCAGAGGGACACATGGGCCTCACCCCTAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000052904.11 |
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| 3UTR CAA 90 bp | AGGCCCATGTGTCCCTCTGCCACTGGAGCTGGAATGTTGGCTAGCTaGATCTTGAGCAGGTTTTGTGCAGGCAACCATAGCTACTGCAAG | + |
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Preference number: 2 (lower is better) Translates to: RPMCPSATGAGMLAS*ILSRFCAGNHSYCK Trigger: CTTGCAGTAGCTATGGTTGCCTGCACAAAACCTGCTCAAGATCAAGCTAGCCAACATTCCAGCTCCAGTGGCAGAGGGACACATGGGCCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000052904.11 |
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| 3UTR-3UTR TCA 90 bp | GAGAGAAGCCGCTCTCCCTCATCTATTTCCTCCCCTGAGGAATGTATTGAACATGTTGCTGGAGACCCATaGCTTTTATGCAGGCAGAAG | + |
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Preference number: 2 (lower is better) Translates to: ERSRSPSSISSPEECIEHVAGDP*LLCRQK Trigger: CTTCTGCCTGCATAAAAGTCATGGGTCTCCAGCAAC...ATGTTCAATACATTCCTCAGGGGAGGAAATAGATGAGGGAGAGCGGCTTCTCTC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000052904.11 ENSMUST00000061099.14 ENSMUST00000159904.8 ENSMUST00000161120.2 |
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| 3UTR-3UTR CCA 90 bp | AAAAGGACGGACTCTCCCTCTCCTAGCAGACCTTGCTGTCACCAGCTTCTCAGCTATAAGCACATGTACTaGATATTTAGGGTTGCTGGA | + |
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Preference number: 2 (lower is better) Translates to: KRTDSPSPSRPCCHQLLSYKHMY*IFRVAG Trigger: TCCAGCAACCCTAAATATCCAGTACATGTGCTTATA...GCTGAGAAGCTGGTGACAGCAAGGTCTGCTAGGAGAGGGAGAGTCCGTCCTTTT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000052904.11 |
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| 3UTR-3UTR TCA 90 bp | GGTTGCTGGAGACCCATGACTTTTATGCAGGCAGAAGAATCAACTTTTGAAAGACAACTTTTGAAAGAGTaGGAGAAGCCGCTCTCCCTC | + |
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Preference number: 2 (lower is better) Translates to: GCWRPMTFMQAEESTFERQLLKE*EKPLSL Trigger: GAGGGAGAGCGGCTTCTCTCACTCTTTCAAAAGTTG...TCTTTCAAAAGTTGATTCTTCTGCCTGCATAAAAGTCATGGGTCTCCAGCAACC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 4 transcripts: ENSMUST00000052904.11 ENSMUST00000061099.14 ENSMUST00000159904.8 ENSMUST00000161120.2 |
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| 3UTR-3UTR TCA 90 bp | GGTATTGTAAGAACTATAAGCACATGTACTGGATATTTAGGGTTGCTGGAGACCCAACTTTTGAAAGAGTaGGAGAAGCCGCTCTCCCTC | + |
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Preference number: 2 (lower is better) Translates to: GIVRTISTCTGYLGLLETQLLKE*EKPLSL Trigger: GAGGGAGAGCGGCTTCTCTCACTCTTTCAAAAGTTG...GGTCTCCAGCAACCCTAAATATCCAGTACATGTGCTTATAGTTCTTACAATACC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000052904.11 ENSMUST00000159904.8 ENSMUST00000161120.2 |
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| 3UTR-3UTR TCA 90 bp | AGAACTATAAGCACATGTACTGGATATTTAGGGTTGCTGGAGACCCATGACTTTGTTGCTGGAGACCCATaGCTTTTATGCAGGCAGAAG | + |
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Preference number: 2 (lower is better) Translates to: RTISTCTGYLGLLETHDFVAGDP*LLCRQK Trigger: CTTCTGCCTGCATAAAAGTCATGGGTCTCCAGCAAC...AAAGTCATGGGTCTCCAGCAACCCTAAATATCCAGTACATGTGCTTATAGTTCT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000052904.11 ENSMUST00000159904.8 ENSMUST00000161120.2 |
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| 3UTR-3UTR TCA 90 bp | GGTTGCTGGAGACCCATGACTTTTATGCAGGCAGAAGAATCAACTTTTGAAAGATCTGGAGTCACGGGTTaGGTTTTGGAAGATGGTTTG | + |
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Preference number: 2 (lower is better) Translates to: GCWRPMTFMQAEESTFERSGVTG*VLEDGL Trigger: CAAACCATCTTCCAAAACTCAACCCGTGACTCCAGA...TCTTTCAAAAGTTGATTCTTCTGCCTGCATAAAAGTCATGGGTCTCCAGCAACC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000159904.8 ENSMUST00000161120.2 |
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| 3UTR-3UTR TCA 90 bp | AAGAGTGAGAGAAGCCGCTCTCCCTCATCTATTTCCTCCCCTGAGGAATGTATTGCATTTGTTGTCTTCTaGTTCATGGAATTGTGTCTT | + |
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Preference number: 2 (lower is better) Translates to: KSERSRSPSSISSPEECIAFVVF*FMELCL Trigger: AAGACACAATTCCATGAATCAGAAGACAACAAATGC...AATACATTCCTCAGGGGAGGAAATAGATGAGGGAGAGCGGCTTCTCTCACTCTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000159904.8 ENSMUST00000161120.2 |
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| 3UTR-3UTR CCA 90 bp | TGCTGGAGACCCATGACTTTTATGCAGGCAGAAGAATCAACTTTTGAAAGAGTGCCATCTGTTGCCTCTTaGATACTTGATTTGAGCCAG | + |
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Preference number: 2 (lower is better) Translates to: CWRPMTFMQAEESTFERVPSVAS*ILDLSQ Trigger: CTGGCTCAAATCAAGTATCCAAGAGGCAACAGATGG...CACTCTTTCAAAAGTTGATTCTTCTGCCTGCATAAAAGTCATGGGTCTCCAGCA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000159904.8 ENSMUST00000161120.2 |
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| 3UTR-3UTR CCA 90 bp | AAGAGTGAGAGAAGCCGCTCTCCCTCATCTATTTCCTCCCCTGAGGAATGTATTTGGAACCTTTTTAACTaGTCCTTTCTTGGCATTTGT | + |
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Preference number: 2 (lower is better) Translates to: KSERSRSPSSISSPEECIWNLFN*SFLGIC Trigger: ACAAATGCCAAGAAAGGACCAGTTAAAAAGGTTCCA...AATACATTCCTCAGGGGAGGAAATAGATGAGGGAGAGCGGCTTCTCTCACTCTT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000159904.8 ENSMUST00000161120.2 |
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| 3UTR-3UTR CCA 90 bp | GAGAGAAGCCGCTCTCCCTCATCTATTTCCTCCCCTGAGGAATGTATTGAACATTGGAACCTTTTTAACTaGTCCTTTCTTGGCATTTGT | + |
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Preference number: 2 (lower is better) Translates to: ERSRSPSSISSPEECIEHWNLFN*SFLGIC Trigger: ACAAATGCCAAGAAAGGACCAGTTAAAAAGGTTCCA...ATGTTCAATACATTCCTCAGGGGAGGAAATAGATGAGGGAGAGCGGCTTCTCTC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000159904.8 ENSMUST00000161120.2 |
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| 3UTR-3UTR TCA 90 bp | AGAACTATAAGCACATGTACTGGATATTTAGGGTTGCTGGAGACCCATGACTTTTGCCTCTTGGATACTTaGTTTGAGCCAGAAACCTTG | + |
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Preference number: 2 (lower is better) Translates to: RTISTCTGYLGLLETHDFCLLDT*FEPETL Trigger: CAAGGTTTCTGGCTCAAATCAAGTATCCAAGAGGCA...AAAGTCATGGGTCTCCAGCAACCCTAAATATCCAGTACATGTGCTTATAGTTCT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000159904.8 ENSMUST00000161120.2 |
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| 3UTR-3UTR TCA 90 bp | GGTATTGTAAGAACTATAAGCACATGTACTGGATATTTAGGGTTGCTGGAGACCAGAAGAATCAACTTTTaGAAGAGTGAGAGAAGCCGC | + |
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Preference number: 2 (lower is better) Translates to: GIVRTISTCTGYLGLLETRRINF*KSERSR Trigger: GCGGCTTCTCTCACTCTTTCAAAAGTTGATTCTTCT...GGTCTCCAGCAACCCTAAATATCCAGTACATGTGCTTATAGTTCTTACAATACC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000052904.11 ENSMUST00000159904.8 ENSMUST00000161120.2 |
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| 3UTR-3UTR TCA 90 bp | ATTGTAAGAACTATAAGCACATGTACTGGATATTTAGGGTTGCTGGAGACCCATTGCCTCTTGGATACTTaGTTTGAGCCAGAAACCTTG | + |
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Preference number: 2 (lower is better) Translates to: IVRTISTCTGYLGLLETHCLLDT*FEPETL Trigger: CAAGGTTTCTGGCTCAAATCAAGTATCCAAGAGGCA...ATGGGTCTCCAGCAACCCTAAATATCCAGTACATGTGCTTATAGTTCTTACAAT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000159904.8 ENSMUST00000161120.2 |
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| 3UTR-3UTR CCA 90 bp | GGTTGCTGGAGACCCATGACTTTTATGCAGGCAGAAGAATCAACTTTTGAAAGATATAAGCACATGTACTaGATATTTAGGGTTGCTGGA | + |
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Preference number: 2 (lower is better) Translates to: GCWRPMTFMQAEESTFERYKHMY*IFRVAG Trigger: TCCAGCAACCCTAAATATCCAGTACATGTGCTTATA...TCTTTCAAAAGTTGATTCTTCTGCCTGCATAAAAGTCATGGGTCTCCAGCAACC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000052904.11 ENSMUST00000159904.8 ENSMUST00000161120.2 |
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| 3UTR-3UTR CCA 90 bp | CTTTCTTGGCATTTGTTGTCTTCTGATTCATGGAATTGTGTCTTCCAGTTTTCACCATCTGTTGCCTCTTaGATACTTGATTTGAGCCAG | + |
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Preference number: 2 (lower is better) Translates to: LSWHLLSSDSWNCVFQFSPSVAS*ILDLSQ Trigger: CTGGCTCAAATCAAGTATCCAAGAGGCAACAGATGG...TGAAAACTGGAAGACACAATTCCATGAATCAGAAGACAACAAATGCCAAGAAAG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000159904.8 ENSMUST00000161120.2 |
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| 3UTR-3UTR CCA 90 bp | AGAACTATAAGCACATGTACTGGATATTTAGGGTTGCTGGAGACCCATGACTTTTTGAGTTTTGGAAGATaGTTTGATCTTGGAACCTTT | + |
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Preference number: 2 (lower is better) Translates to: RTISTCTGYLGLLETHDFLSFGR*FDLGTF Trigger: AAAGGTTCCAAGATCAAACCATCTTCCAAAACTCAA...AAAGTCATGGGTCTCCAGCAACCCTAAATATCCAGTACATGTGCTTATAGTTCT 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000159904.8 ENSMUST00000161120.2 |
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| 3UTR CAA 90 bp | CCTCTATTTCCTTCTAGTCTCCAGTATTCCAAACTCCTGCAAAGTTaGGTCCAAAAACTAGACCATTTTTGTGAATTAGTAAATGTCACA | + |
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Preference number: 2 (lower is better) Translates to: PLFPSSLQYSKLLQS*VQKLDHFCELVNVT Trigger: TGTGACATTTACTAATTCACAAAAATGGTCTAGTTTTTGGACCAAACTTTGCAGGAGTTTGGAATACTGGAGACTAGAAGGAAATAGAGG 37% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000052904.11 |
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| 3UTR-3UTR CCA 90 bp | TACTGCAAGTTCATGAGTGCAGCATTATGGTTCTATTATCTACACATACATGTAGAACAATGCAGTGCATaGCTGAAGTTATTGATAATA | + |
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Preference number: 2 (lower is better) Translates to: YCKFMSAALWFYYLHIHVEQCSA*LKLLII Trigger: TATTATCAATAACTTCAGCCATGCACTGCATTGTTC...TACATGTATGTGTAGATAATAGAACCATAATGCTGCACTCATGAACTTGCAGTA 34% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000052904.11 |
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| 3UTR CCA 72 bp | GCCCAGCTCTGGAGTCACGGGTTGAGTTTTGGAAGATaGTTTGATCTTGGAACCTTTTTAACTGGTCCTTTC | + |
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Preference number: 3 (lower is better) Translates to: AQLWSHGLSFGR*FDLGTFLTGPF Trigger: GAAAGGACCAGTTAAAAAGGTTCCAAGATCAAACCATCTTCCAAAACTCAACCCGTGACTCCAGAGCTGGGC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000159904.8 ENSMUST00000161120.2 |
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| 3UTR TCA 72 bp | AAAAATAGAAGTCTGCCCAGCTCTGGAGTCACGGGTTaGGTTTTGGAAGATGGTTTGATCTTGGAACCTTTT | + |
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Preference number: 3 (lower is better) Translates to: KNRSLPSSGVTG*VLEDGLILEPF Trigger: AAAAGGTTCCAAGATCAAACCATCTTCCAAAACTCAACCCGTGACTCCAGAGCTGGGCAGACTTCTATTTTT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000159904.8 ENSMUST00000161120.2 |
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| 3UTR-3UTR CAA 90 bp | GGTTGCTGGAGACCCATGACTTTTATGCAGGCAGAAGAATCAACTTTTGAAAGAGTCCTTTCTTGGCATTaGTTGTCTTCTGATTCATGG | + |
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Preference number: 3 (lower is better) Translates to: GCWRPMTFMQAEESTFERVLSWH*LSSDSW Trigger: CCATGAATCAGAAGACAACAAATGCCAAGAAAGGAC...TCTTTCAAAAGTTGATTCTTCTGCCTGCATAAAAGTCATGGGTCTCCAGCAACC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000159904.8 ENSMUST00000161120.2 |
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| 3UTR GCA 72 bp | ATCTTGAGCAGGTTTTGTGCAGGCAACCATAGCTACTaGAAGTTCATGAGTGCAGCATTATGGTTCTATTAT | + |
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Preference number: 3 (lower is better) Translates to: ILSRFCAGNHSY*KFMSAALWFYY Trigger: ATAATAGAACCATAATGCTGCACTCATGAACTTGCAGTAGCTATGGTTGCCTGCACAAAACCTGCTCAAGAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000052904.11 |
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| 3UTR-3UTR CAA 90 bp | ATTGTAAGAACTATAAGCACATGTACTGGATATTTAGGGTTGCTGGAGACCCATACTGGATATTTAGGGTaGCTGGAGACCCATGACTTT | + |
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Preference number: 3 (lower is better) Translates to: IVRTISTCTGYLGLLETHTGYLG*LETHDF Trigger: AAAGTCATGGGTCTCCAGCAACCCTAAATATCCAGT...ATGGGTCTCCAGCAACCCTAAATATCCAGTACATGTGCTTATAGTTCTTACAAT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000052904.11 ENSMUST00000159904.8 ENSMUST00000161120.2 |
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| 3UTR TCA 72 bp | TTTTTAACTGGTCCTTTCTTGGCATTTGTTGTCTTCTaGTTCATGGAATTGTGTCTTCCAGTTTTCACCGGA | + |
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Preference number: 3 (lower is better) Translates to: FLTGPFLAFVVF*FMELCLPVFTG Trigger: TCCGGTGAAAACTGGAAGACACAATTCCATGAATCAGAAGACAACAAATGCCAAGAAAGGACCAGTTAAAAA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000159904.8 ENSMUST00000161120.2 |
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| 3UTR CAA 72 bp | AGGCCCATGTGTCCCTCTGCCACTGGAGCTGGAATGTaGGCTAGCTTGATCTTGAGCAGGTTTTGTGCAGGC | + |
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Preference number: 4 (lower is better) Translates to: RPMCPSATGAGM*ASLILSRFCAG Trigger: GCCTGCACAAAACCTGCTCAAGATCAAGCTAGCCAACATTCCAGCTCCAGTGGCAGAGGGACACATGGGCCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000052904.11 |
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| 3UTR CAA 72 bp | TGTCCCTCTGCCACTGGAGCTGGAATGTTGGCTAGCTaGATCTTGAGCAGGTTTTGTGCAGGCAACCATAGC | + |
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Preference number: 4 (lower is better) Translates to: CPSATGAGMLAS*ILSRFCAGNHS Trigger: GCTATGGTTGCCTGCACAAAACCTGCTCAAGATCAAGCTAGCCAACATTCCAGCTCCAGTGGCAGAGGGACA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000052904.11 |
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| CDS-3UTR TCA 90 bp | ATTCTGAACCTACCAGGGACCACACCCTTAAAAGGACGGACTCTCCCTCTCCTAGGAAGACAGTCTATCTaGAGGGTTTCCACGCATCTT | + |
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Preference number: 4 (lower is better) Translates to: ILNLPGTTPLKGRTLPLLGRQSI*RVSTHL Trigger: AAGATGCGTGGAAACCCTTCAGATAGACTGTCTTCC...TAGGAGAGGGAGAGTCCGTCCTTTTAAGGGTGTGGTCCCTGGTAGGTTCAGAAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000052904.11 |
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| CDS-3UTR TCA 90 bp | GTGAGAGAAGCCGCTCTCCCTCATCTATTTCCTCCCCTGAGGAATGTATTGAACCCTGTGGTATGCCTTTaGCTCCTGCTCCAGTCTAAA | + |
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Preference number: 4 (lower is better) Translates to: VREAALPHLFPPLRNVLNPVVCL*LLLQSK Trigger: TTTAGACTGGAGCAGGAGTCAAAGGCATACCACAGG...GTTCAATACATTCCTCAGGGGAGGAAATAGATGAGGGAGAGCGGCTTCTCTCAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000052904.11 ENSMUST00000061099.14 ENSMUST00000159904.8 ENSMUST00000161120.2 |
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| CDS-3UTR CCA 90 bp | AAGAGTGAGAGAAGCCGCTCTCCCTCATCTATTTCCTCCCCTGAGGAATGTATTTCATTCAGCTCCAGCTaGGTCTCGTACCGGGTTTTC | + |
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Preference number: 4 (lower is better) Translates to: KSERSRSPSSISSPEECISFSSS*VSYRVF Trigger: GAAAACCCGGTACGAGACCCAGCTGGAGCTGAATGA...AATACATTCCTCAGGGGAGGAAATAGATGAGGGAGAGCGGCTTCTCTCACTCTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000061099.14 |
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| CDS-3UTR CCA 90 bp | GCCGCTCTCCCTCATCTATTTCCTCCCCTGAGGAATGTATTGAACATTAGCTTCGCCGTATCTCAAGTGTaGAGAGCTGCACAACATCCT | + |
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Preference number: 4 (lower is better) Translates to: AALPHLFPPLRNVLNISFAVSQV*RAAQHP Trigger: AGGATGTTGTGCAGCTCTCCACACTTGAGATACGGC...GAAGCTAATGTTCAATACATTCCTCAGGGGAGGAAATAGATGAGGGAGAGCGGC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000061099.14 |
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| CDS-3UTR TCA 90 bp | AAGAGTGAGAGAAGCCGCTCTCCCTCATCTATTTCCTCCCCTGAGGAATGTATTGGAAGACAGTCTATCTaGAGGGTTTCCACGCATCTT | + |
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Preference number: 4 (lower is better) Translates to: KSERSRSPSSISSPEECIGRQSI*RVSTHL Trigger: AAGATGCGTGGAAACCCTTCAGATAGACTGTCTTCC...AATACATTCCTCAGGGGAGGAAATAGATGAGGGAGAGCGGCTTCTCTCACTCTT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000052904.11 ENSMUST00000061099.14 ENSMUST00000159904.8 ENSMUST00000161120.2 |
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| CDS-3UTR CCA 90 bp | GCCGCTCTCCCTCATCTATTTCCTCCCCTGAGGAATGTATTGAACATTAGCTTCACAACATCCTTCATGTaGATTTCCTCCAGCAGCTCC | + |
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Preference number: 4 (lower is better) Translates to: AALPHLFPPLRNVLNISFTTSFM*ISSSSS Trigger: GGAGCTGCTGGAGGAAATCCACATGAAGGATGTTGT...GAAGCTAATGTTCAATACATTCCTCAGGGGAGGAAATAGATGAGGGAGAGCGGC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000061099.14 |
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| CDS-3UTR TCA 90 bp | GTGAGAGAAGCCGCTCTCCCTCATCTATTTCCTCCCCTGAGGAATGTATTGAACCTTGGATACTTGATTTaGGCCAGAAACCTGAGTCAT | + |
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Preference number: 4 (lower is better) Translates to: VREAALPHLFPPLRNVLNLGYLI*ARNLSH Trigger: ATGACTCAGGTTTCTGGCTCAAATCAAGTATCCAAG...GTTCAATACATTCCTCAGGGGAGGAAATAGATGAGGGAGAGCGGCTTCTCTCAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000052904.11 ENSMUST00000061099.14 |
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| CDS-3UTR TCA 90 bp | CAGGCAGAAGAATCAACTTTTGAAAGAGTGAGAGAAGCCGCTCTCCCTCATCTAGAAGCCACGAATGAATaGGTTCCTGAGTCATTTCCG | + |
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Preference number: 4 (lower is better) Translates to: QAEESTFERVREAALPHLEATNE*VPESFP Trigger: CGGAAATGACTCAGGAACTCATTCATTCGTGGCTTC...TAGATGAGGGAGAGCGGCTTCTCTCACTCTTTCAAAAGTTGATTCTTCTGCCTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000159904.8 ENSMUST00000161120.2 |
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| CDS-3UTR GCA 90 bp | CTCCCTCATCTATTTCCTCCCCTGAGGAATGTATTGAACATTAGCTTCCTAAACGTTGGCCTCCAGCTCTaGTATCTTGTGCCGTATCTC | + |
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Preference number: 4 (lower is better) Translates to: LPHLFPPLRNVLNISFLNVGLQL*YLVPYL Trigger: GAGATACGGCACAAGATAGCAGAGCTGGAGGCCAAC...GTTTAGGAAGCTAATGTTCAATACATTCCTCAGGGGAGGAAATAGATGAGGGAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000061099.14 |
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| CDS-3UTR CCA 90 bp | ATTCTGAACCTACCAGGGACCACACCCTTAAAAGGACGGACTCTCCCTCTCCTATCTCATAGACACGAATaGAAGACAGTCTATCTGAAG | + |
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Preference number: 4 (lower is better) Translates to: ILNLPGTTPLKGRTLPLLSHRHE*KTVYLK Trigger: CTTCAGATAGACTGTCTTCCATTCGTGTCTATGAGA...TAGGAGAGGGAGAGTCCGTCCTTTTAAGGGTGTGGTCCCTGGTAGGTTCAGAAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000052904.11 |
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| CDS-3UTR CCA 90 bp | AAGAGTGAGAGAAGCCGCTCTCCCTCATCTATTTCCTCCCCTGAGGAATGTATTCCATCTGTTGCCTCTTaGATACTTGATTTGAGCCAG | + |
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Preference number: 4 (lower is better) Translates to: KSERSRSPSSISSPEECIPSVAS*ILDLSQ Trigger: CTGGCTCAAATCAAGTATCCAAGAGGCAACAGATGG...AATACATTCCTCAGGGGAGGAAATAGATGAGGGAGAGCGGCTTCTCTCACTCTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000052904.11 ENSMUST00000061099.14 |
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| CDS-3UTR TCA 90 bp | TTTGAAAGAGTGAGAGAAGCCGCTCTCCCTCATCTATTTCCTCCCCTGAGGAATCTTGGATACTTGATTTaGGCCAGAAACCTGAGTCAT | + |
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Preference number: 4 (lower is better) Translates to: FERVREAALPHLFPPLRNLGYLI*ARNLSH Trigger: ATGACTCAGGTTTCTGGCTCAAATCAAGTATCCAAG...ATTCCTCAGGGGAGGAAATAGATGAGGGAGAGCGGCTTCTCTCACTCTTTCAAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000052904.11 ENSMUST00000061099.14 |
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| CDS-3UTR GCA 90 bp | GAGAGAAGCCGCTCTCCCTCATCTATTTCCTCCCCTGAGGAATGTATTGAACATTATGCCTTTGACTCCTaGTCCAGTCTAAACGCATAT | + |
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Preference number: 4 (lower is better) Translates to: ERSRSPSSISSPEECIEHYAFDS*SSLNAY Trigger: ATATGCGTTTAGACTGGAGCAGGAGTCAAAGGCATA...ATGTTCAATACATTCCTCAGGGGAGGAAATAGATGAGGGAGAGCGGCTTCTCTC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000052904.11 ENSMUST00000061099.14 ENSMUST00000159904.8 ENSMUST00000161120.2 |
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| CDS-3UTR CCA 90 bp | TTTGAAAGAGTGAGAGAAGCCGCTCTCCCTCATCTATTTCCTCCCCTGAGGAATATTTGCTTTTCCAATTaGTCATTCAGCTCCAGCTGG | + |
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Preference number: 4 (lower is better) Translates to: FERVREAALPHLFPPLRNICFSN*SFSSSW Trigger: CCAGCTGGAGCTGAATGACCAATTGGAAAAGCAAAT...ATTCCTCAGGGGAGGAAATAGATGAGGGAGAGCGGCTTCTCTCACTCTTTCAAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000061099.14 |
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| CDS-3UTR CCA 90 bp | CAGGCAGAAGAATCAACTTTTGAAAGAGTGAGAGAAGCCGCTCTCCCTCATCTACCATCTGTTGCCTCTTaGATACTTGATTTGAGCCAG | + |
|
Preference number: 4 (lower is better) Translates to: QAEESTFERVREAALPHLPSVAS*ILDLSQ Trigger: CTGGCTCAAATCAAGTATCCAAGAGGCAACAGATGG...TAGATGAGGGAGAGCGGCTTCTCTCACTCTTTCAAAAGTTGATTCTTCTGCCTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000052904.11 ENSMUST00000061099.14 |
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| CDS-3UTR TCA 90 bp | TGCTGGAGACCCATGACTTTTATGCAGGCAGAAGAATCAACTTTTGAAAGAGTGGGAAGACAGTCTATCTaGAGGGTTTCCACGCATCTT | + |
|
Preference number: 4 (lower is better) Translates to: CWRPMTFMQAEESTFERVGRQSI*RVSTHL Trigger: AAGATGCGTGGAAACCCTTCAGATAGACTGTCTTCC...CACTCTTTCAAAAGTTGATTCTTCTGCCTGCATAAAAGTCATGGGTCTCCAGCA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000052904.11 ENSMUST00000061099.14 ENSMUST00000159904.8 ENSMUST00000161120.2 |
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| CDS-3UTR GCA 90 bp | TGCTGGAGACCCATGACTTTTATGCAGGCAGAAGAATCAACTTTTGAAAGAGTGTCAAGTGTGGAGAGCTaGACAACATCCTTCATGTGG | + |
|
Preference number: 4 (lower is better) Translates to: CWRPMTFMQAEESTFERVSSVES*TTSFMW Trigger: CCACATGAAGGATGTTGTGCAGCTCTCCACACTTGA...CACTCTTTCAAAAGTTGATTCTTCTGCCTGCATAAAAGTCATGGGTCTCCAGCA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000061099.14 |
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| CDS-3UTR CCA 90 bp | ATTCTGAACCTACCAGGGACCACACCCTTAAAAGGACGGACTCTCCCTCTCCTATTGTCTTCTGATTCATaGAATTGTGTCTTCCAGTTT | + |
|
Preference number: 4 (lower is better) Translates to: ILNLPGTTPLKGRTLPLLLSSDS*NCVFQF Trigger: AAACTGGAAGACACAATTCCATGAATCAGAAGACAA...TAGGAGAGGGAGAGTCCGTCCTTTTAAGGGTGTGGTCCCTGGTAGGTTCAGAAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000052904.11 |
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| CDS-3UTR TCA 90 bp | AGAACTATAAGCACATGTACTGGATATTTAGGGTTGCTGGAGACCCATGACTTTGGAAGACAGTCTATCTaGAGGGTTTCCACGCATCTT | + |
|
Preference number: 4 (lower is better) Translates to: RTISTCTGYLGLLETHDFGRQSI*RVSTHL Trigger: AAGATGCGTGGAAACCCTTCAGATAGACTGTCTTCC...AAAGTCATGGGTCTCCAGCAACCCTAAATATCCAGTACATGTGCTTATAGTTCT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000052904.11 ENSMUST00000159904.8 ENSMUST00000161120.2 |
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| CDS-3UTR GCA 90 bp | TTTGAAAGAGTGAGAGAAGCCGCTCTCCCTCATCTATTTCCTCCCCTGAGGAATTTCAGAGACACTATTTaGTTTTCCAATTGGTCATTC | + |
|
Preference number: 4 (lower is better) Translates to: FERVREAALPHLFPPLRNFRDTI*FSNWSF Trigger: GAATGACCAATTGGAAAAGCAAATAGTGTCTCTGAA...ATTCCTCAGGGGAGGAAATAGATGAGGGAGAGCGGCTTCTCTCACTCTTTCAAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000061099.14 |
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| CDS-3UTR GCA 90 bp | CTCCCTCATCTATTTCCTCCCCTGAGGAATGTATTGAACATTAGCTTCCTAAACTATGCCTTTGACTCCTaGTCCAGTCTAAACGCATAT | + |
|
Preference number: 4 (lower is better) Translates to: LPHLFPPLRNVLNISFLNYAFDS*SSLNAY Trigger: ATATGCGTTTAGACTGGAGCAGGAGTCAAAGGCATA...GTTTAGGAAGCTAATGTTCAATACATTCCTCAGGGGAGGAAATAGATGAGGGAG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000052904.11 ENSMUST00000061099.14 ENSMUST00000159904.8 ENSMUST00000161120.2 |
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| CDS-3UTR CCA 90 bp | AAGAGTGAGAGAAGCCGCTCTCCCTCATCTATTTCCTCCCCTGAGGAATGTATTTTGTCTTCTGATTCATaGAATTGTGTCTTCCAGTTT | + |
|
Preference number: 4 (lower is better) Translates to: KSERSRSPSSISSPEECILSSDS*NCVFQF Trigger: AAACTGGAAGACACAATTCCATGAATCAGAAGACAA...AATACATTCCTCAGGGGAGGAAATAGATGAGGGAGAGCGGCTTCTCTCACTCTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000052904.11 ENSMUST00000061099.14 |
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| CDS-3UTR TCA 90 bp | CTTTCTTGGCATTTGTTGTCTTCTGATTCATGGAATTGTGTCTTCCAGTTTTCAGAAGCCACGAATGAATaGGTTCCTGAGTCATTTCCG | + |
|
Preference number: 4 (lower is better) Translates to: LSWHLLSSDSWNCVFQFSEATNE*VPESFP Trigger: CGGAAATGACTCAGGAACTCATTCATTCGTGGCTTC...TGAAAACTGGAAGACACAATTCCATGAATCAGAAGACAACAAATGCCAAGAAAG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000159904.8 ENSMUST00000161120.2 |
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| CDS-3UTR TCA 90 bp | CTCCCTCATCTATTTCCTCCCCTGAGGAATGTATTGAACATTAGCTTCCTAAACGCATTTGTTGTCTTCTaGTTCATGGAATTGTGTCTT | + |
|
Preference number: 4 (lower is better) Translates to: LPHLFPPLRNVLNISFLNAFVVF*FMELCL Trigger: AAGACACAATTCCATGAATCAGAAGACAACAAATGC...GTTTAGGAAGCTAATGTTCAATACATTCCTCAGGGGAGGAAATAGATGAGGGAG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000052904.11 ENSMUST00000061099.14 |
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| CDS-3UTR TCA 90 bp | GGTTGCTGGAGACCCATGACTTTTATGCAGGCAGAAGAATCAACTTTTGAAAGAGCATTTGTTGTCTTCTaGTTCATGGAATTGTGTCTT | + |
|
Preference number: 4 (lower is better) Translates to: GCWRPMTFMQAEESTFERAFVVF*FMELCL Trigger: AAGACACAATTCCATGAATCAGAAGACAACAAATGC...TCTTTCAAAAGTTGATTCTTCTGCCTGCATAAAAGTCATGGGTCTCCAGCAACC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000052904.11 ENSMUST00000061099.14 |
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| CDS-3UTR CCA 90 bp | CTCCCTCATCTATTTCCTCCCCTGAGGAATGTATTGAACATTAGCTTCCTAAACTTGAGTTTTGGAAGATaGTTTGATCTTGGAACCTTT | + |
|
Preference number: 4 (lower is better) Translates to: LPHLFPPLRNVLNISFLNLSFGR*FDLGTF Trigger: AAAGGTTCCAAGATCAAACCATCTTCCAAAACTCAA...GTTTAGGAAGCTAATGTTCAATACATTCCTCAGGGGAGGAAATAGATGAGGGAG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000052904.11 ENSMUST00000061099.14 |
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| CDS-3UTR CCA 90 bp | GGTATTGTAAGAACTATAAGCACATGTACTGGATATTTAGGGTTGCTGGAGACCTTGAGTTTTGGAAGATaGTTTGATCTTGGAACCTTT | + |
|
Preference number: 4 (lower is better) Translates to: GIVRTISTCTGYLGLLETLSFGR*FDLGTF Trigger: AAAGGTTCCAAGATCAAACCATCTTCCAAAACTCAA...GGTCTCCAGCAACCCTAAATATCCAGTACATGTGCTTATAGTTCTTACAATACC 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000052904.11 |
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| CDS-3UTR CCA 90 bp | TACTGCAAGTTCATGAGTGCAGCATTATGGTTCTATTATCTACACATACATGTATGGAACCTTTTTAACTaGTCCTTTCTTGGCATTTGT | + |
|
Preference number: 4 (lower is better) Translates to: YCKFMSAALWFYYLHIHVWNLFN*SFLGIC Trigger: ACAAATGCCAAGAAAGGACCAGTTAAAAAGGTTCCA...TACATGTATGTGTAGATAATAGAACCATAATGCTGCACTCATGAACTTGCAGTA 36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000052904.11 |
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| CDS TCA 90 bp | GGGTCTCGTACCGGGTTTTCCACTCACTGCCTGCAAGGTCACCGTTaGGGTTGGCCTCCAGCTCTGCTATCTTGTGCCGTATCTCAAGTG | + |
|
Preference number: 5 (lower is better) Translates to: GSRTGFSTHCLQGHR*GWPPALLSCAVSQV Trigger: CACTTGAGATACGGCACAAGATAGCAGAGCTGGAGGCCAACCTCAACGGTGACCTTGCAGGCAGTGAGTGGAAAACCCGGTACGAGACCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000061099.14 ENSMUST00000118963.9 |
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| CDS GCA 90 bp | ATTCAGCTCCAGCTGGGTCTCGTACCGGGTTTTCCACTCACTGCCTaGAAGGTCACCGTTGAGGTTGGCCTCCAGCTCTGCTATCTTGTG | + |
|
Preference number: 5 (lower is better) Translates to: IQLQLGLVPGFPLTA*KVTVEVGLQLCYLV Trigger: CACAAGATAGCAGAGCTGGAGGCCAACCTCAACGGTGACCTTGCAGGCAGTGAGTGGAAAACCCGGTACGAGACCCAGCTGGAGCTGAAT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000061099.14 ENSMUST00000118963.9 |
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| CDS GCA 90 bp | CCACTCACTGCCTGCAAGGTCACCGTTGAGGTTGGCCTCCAGCTCTaGTATCTTGTGCCGTATCTCAAGTGTGGAGAGCTGCACAACATC | + |
|
Preference number: 5 (lower is better) Translates to: PLTACKVTVEVGLQL*YLVPYLKCGELHNI Trigger: GATGTTGTGCAGCTCTCCACACTTGAGATACGGCACAAGATAGCAGAGCTGGAGGCCAACCTCAACGGTGACCTTGCAGGCAGTGAGTGG 56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000061099.14 ENSMUST00000118963.9 |
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| CDS CCA 90 bp | TTGTGCCGTATCTCAAGTGTGGAGAGCTGCACAACATCCTTCATGTaGATTTCCTCCAGCAGCTCCAGCTTCAGGCGGTCTGTGCTCACC | + |
|
Preference number: 5 (lower is better) Translates to: LCRISSVESCTTSFM*ISSSSSSFRRSVLT Trigger: GGTGAGCACAGACCGCCTGAAGCTGGAGCTGCTGGAGGAAATCCACATGAAGGATGTTGTGCAGCTCTCCACACTTGAGATACGGCACAA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000061099.14 ENSMUST00000118963.9 |
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| CDS CCA 90 bp | AGCCGCCAATCACTGACTGCAAAGCTCTTCTTCTTTGGCCTTCTCTaGACATGGTCCAGCATGGAGAATTTGGTTTTCACCGGACTTTCC | + |
|
Preference number: 5 (lower is better) Translates to: SRQSLTAKLFFFGLL*TWSSMENLVFTGLS Trigger: GGAAAGTCCGGTGAAAACCAAATTCTCCATGCTGGACCATGTCCAGAGAAGGCCAAAGAAGAAGAGCTTTGCAGTCAGTGATTGGCGGCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000118963.9 |
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| CDS-3UTR CAA 90 bp | GTGAGAGAAGCCGCTCTCCCTCATCTATTTCCTCCCCTGAGGAATGTATTGAACTCCAGCTCTGCTATCTaGTGCCGTATCTCAAGTGTG | + |
|
Preference number: 5 (lower is better) Translates to: VREAALPHLFPPLRNVLNSSSAI*CRISSV Trigger: CACACTTGAGATACGGCACAAGATAGCAGAGCTGGA...GTTCAATACATTCCTCAGGGGAGGAAATAGATGAGGGAGAGCGGCTTCTCTCAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000061099.14 |
||
| CDS-3UTR CAA 90 bp | GAGAGAAGCCGCTCTCCCTCATCTATTTCCTCCCCTGAGGAATGTATTGAACATTATTTGCTTTTCCAATaGGTCATTCAGCTCCAGCTG | + |
|
Preference number: 5 (lower is better) Translates to: ERSRSPSSISSPEECIEHYLLFQ*VIQLQL Trigger: CAGCTGGAGCTGAATGACCAATTGGAAAAGCAAATA...ATGTTCAATACATTCCTCAGGGGAGGAAATAGATGAGGGAGAGCGGCTTCTCTC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000061099.14 |
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| CDS-3UTR CAA 90 bp | AAGAGTGAGAGAAGCCGCTCTCCCTCATCTATTTCCTCCCCTGAGGAATGTATTCGCATATTCTTTCACTaGGCTTTCGAGACTCCTTTT | + |
|
Preference number: 5 (lower is better) Translates to: KSERSRSPSSISSPEECIRIFFH*AFETPF Trigger: AAAAGGAGTCTCGAAAGCCAAGTGAAAGAATATGCG...AATACATTCCTCAGGGGAGGAAATAGATGAGGGAGAGCGGCTTCTCTCACTCTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000052904.11 ENSMUST00000061099.14 ENSMUST00000159904.8 ENSMUST00000161120.2 |
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| CDS-3UTR CAA 90 bp | GCCGCTCTCCCTCATCTATTTCCTCCCCTGAGGAATGTATTGAACATTAGCTTCGTCCTTTCTTGGCATTaGTTGTCTTCTGATTCATGG | + |
|
Preference number: 5 (lower is better) Translates to: AALPHLFPPLRNVLNISFVLSWH*LSSDSW Trigger: CCATGAATCAGAAGACAACAAATGCCAAGAAAGGAC...GAAGCTAATGTTCAATACATTCCTCAGGGGAGGAAATAGATGAGGGAGAGCGGC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000052904.11 ENSMUST00000061099.14 |
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| CDS-3UTR CAA 90 bp | GAGAGAAGCCGCTCTCCCTCATCTATTTCCTCCCCTGAGGAATGTATTGAACATGTCCTTTCTTGGCATTaGTTGTCTTCTGATTCATGG | + |
|
Preference number: 5 (lower is better) Translates to: ERSRSPSSISSPEECIEHVLSWH*LSSDSW Trigger: CCATGAATCAGAAGACAACAAATGCCAAGAAAGGAC...ATGTTCAATACATTCCTCAGGGGAGGAAATAGATGAGGGAGAGCGGCTTCTCTC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000052904.11 ENSMUST00000061099.14 |
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| CDS TCA 90 bp | TTCCACTGGCATCTTCTCATAGACACGAATGGAAGACAGTCTATCTaGAGGGTTTCCACGCATCTTTTCCATTTTCTCTTTCAGAGACAC | + |
|
Preference number: 5 (lower is better) Translates to: FHWHLLIDTNGRQSI*RVSTHLFHFLFQRH Trigger: GTGTCTCTGAAAGAGAAAATGGAAAAGATGCGTGGAAACCCTTCAGATAGACTGTCTTCCATTCGTGTCTATGAGAAGATGCCAGTGGAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000061099.14 ENSMUST00000118963.9 |
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| CDS-3UTR CAA 90 bp | GAGAGAAGCCGCTCTCCCTCATCTATTTCCTCCCCTGAGGAATGTATTGAACATCTTTCTTGGCATTTGTaGTCTTCTGATTCATGGAAT | + |
|
Preference number: 5 (lower is better) Translates to: ERSRSPSSISSPEECIEHLSWHL*SSDSWN Trigger: ATTCCATGAATCAGAAGACAACAAATGCCAAGAAAG...ATGTTCAATACATTCCTCAGGGGAGGAAATAGATGAGGGAGAGCGGCTTCTCTC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000052904.11 ENSMUST00000061099.14 |
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| CDS-3UTR CAA 90 bp | CTCCCTCATCTATTTCCTCCCCTGAGGAATGTATTGAACATTAGCTTCCTAAACCGCATATTCTTTCACTaGGCTTTCGAGACTCCTTTT | + |
|
Preference number: 5 (lower is better) Translates to: LPHLFPPLRNVLNISFLNRIFFH*AFETPF Trigger: AAAAGGAGTCTCGAAAGCCAAGTGAAAGAATATGCG...GTTTAGGAAGCTAATGTTCAATACATTCCTCAGGGGAGGAAATAGATGAGGGAG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000052904.11 ENSMUST00000061099.14 ENSMUST00000159904.8 ENSMUST00000161120.2 |
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| CDS-3UTR CAA 90 bp | CTCCCTCATCTATTTCCTCCCCTGAGGAATGTATTGAACATTAGCTTCCTAAACTCTTGGATACTTGATTaGAGCCAGAAACCTGAGTCA | + |
|
Preference number: 5 (lower is better) Translates to: LPHLFPPLRNVLNISFLNSWILD*SQKPES Trigger: TGACTCAGGTTTCTGGCTCAAATCAAGTATCCAAGA...GTTTAGGAAGCTAATGTTCAATACATTCCTCAGGGGAGGAAATAGATGAGGGAG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000052904.11 ENSMUST00000061099.14 |
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| CDS-3UTR CAA 90 bp | AGAACTATAAGCACATGTACTGGATATTTAGGGTTGCTGGAGACCCATGACTTTCGCATATTCTTTCACTaGGCTTTCGAGACTCCTTTT | + |
|
Preference number: 5 (lower is better) Translates to: RTISTCTGYLGLLETHDFRIFFH*AFETPF Trigger: AAAAGGAGTCTCGAAAGCCAAGTGAAAGAATATGCG...AAAGTCATGGGTCTCCAGCAACCCTAAATATCCAGTACATGTGCTTATAGTTCT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000052904.11 ENSMUST00000159904.8 ENSMUST00000161120.2 |
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| CDS-3UTR CAA 90 bp | GGTATTGTAAGAACTATAAGCACATGTACTGGATATTTAGGGTTGCTGGAGACCTCTTGGATACTTGATTaGAGCCAGAAACCTGAGTCA | + |
|
Preference number: 5 (lower is better) Translates to: GIVRTISTCTGYLGLLETSWILD*SQKPES Trigger: TGACTCAGGTTTCTGGCTCAAATCAAGTATCCAAGA...GGTCTCCAGCAACCCTAAATATCCAGTACATGTGCTTATAGTTCTTACAATACC 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000052904.11 |
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| CDS-3UTR CAA 90 bp | CTCCCTCATCTATTTCCTCCCCTGAGGAATGTATTGAACATTAGCTTCCTAAACCTTTCTTGGCATTTGTaGTCTTCTGATTCATGGAAT | + |
|
Preference number: 5 (lower is better) Translates to: LPHLFPPLRNVLNISFLNLSWHL*SSDSWN Trigger: ATTCCATGAATCAGAAGACAACAAATGCCAAGAAAG...GTTTAGGAAGCTAATGTTCAATACATTCCTCAGGGGAGGAAATAGATGAGGGAG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000052904.11 ENSMUST00000061099.14 |
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| CDS GCA 72 bp | GGATTTCCTCCAGCAGCTCCAGCTTCAGGCGGTCTGTaGTCACCCCCTCGAAAGTGTCTCCGTGGCCCTCTC | + |
|
Preference number: 6 (lower is better) Translates to: GFPPAAPASGGL*SPPRKCLRGPL Trigger: GAGAGGGCCACGGAGACACTTTCGAGGGGGTGAGCACAGACCGCCTGAAGCTGGAGCTGCTGGAGGAAATCC 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000061099.14 ENSMUST00000118963.9 |
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| CDS GCA 72 bp | CAGCTGGGTCTCGTACCGGGTTTTCCACTCACTGCCTaGAAGGTCACCGTTGAGGTTGGCCTCCAGCTCTGC | + |
|
Preference number: 6 (lower is better) Translates to: QLGLVPGFPLTA*KVTVEVGLQLC Trigger: GCAGAGCTGGAGGCCAACCTCAACGGTGACCTTGCAGGCAGTGAGTGGAAAACCCGGTACGAGACCCAGCTG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000061099.14 ENSMUST00000118963.9 |
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| CDS TCA 72 bp | ACCGGGTTTTCCACTCACTGCCTGCAAGGTCACCGTTaGGGTTGGCCTCCAGCTCTGCTATCTTGTGCCGTA | + |
|
Preference number: 6 (lower is better) Translates to: TGFSTHCLQGHR*GWPPALLSCAV Trigger: TACGGCACAAGATAGCAGAGCTGGAGGCCAACCTCAACGGTGACCTTGCAGGCAGTGAGTGGAAAACCCGGT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000061099.14 ENSMUST00000118963.9 |
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| CDS GCA 72 bp | GCCTGCAAGGTCACCGTTGAGGTTGGCCTCCAGCTCTaGTATCTTGTGCCGTATCTCAAGTGTGGAGAGCTG | + |
|
Preference number: 6 (lower is better) Translates to: ACKVTVEVGLQL*YLVPYLKCGEL Trigger: CAGCTCTCCACACTTGAGATACGGCACAAGATAGCAGAGCTGGAGGCCAACCTCAACGGTGACCTTGCAGGC 57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000061099.14 ENSMUST00000118963.9 |
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| CDS CAA 72 bp | TACCGGGTTTTCCACTCACTGCCTGCAAGGTCACCGTaGAGGTTGGCCTCCAGCTCTGCTATCTTGTGCCGT | + |
|
Preference number: 6 (lower is better) Translates to: YRVFHSLPARSP*RLASSSAILCR Trigger: ACGGCACAAGATAGCAGAGCTGGAGGCCAACCTCAACGGTGACCTTGCAGGCAGTGAGTGGAAAACCCGGTA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000061099.14 ENSMUST00000118963.9 |
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| CDS CAA 90 bp | TCGTACCGGGTTTTCCACTCACTGCCTGCAAGGTCACCGTTGAGGTaGGCCTCCAGCTCTGCTATCTTGTGCCGTATCTCAAGTGTGGAG | + |
|
Preference number: 6 (lower is better) Translates to: SYRVFHSLPARSPLR*ASSSAILCRISSVE Trigger: CTCCACACTTGAGATACGGCACAAGATAGCAGAGCTGGAGGCCAACCTCAACGGTGACCTTGCAGGCAGTGAGTGGAAAACCCGGTACGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000061099.14 ENSMUST00000118963.9 |
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| CDS CAA 90 bp | TGGGTCTCGTACCGGGTTTTCCACTCACTGCCTGCAAGGTCACCGTaGAGGTTGGCCTCCAGCTCTGCTATCTTGTGCCGTATCTCAAGT | + |
|
Preference number: 6 (lower is better) Translates to: WVSYRVFHSLPARSP*RLASSSAILCRISS Trigger: ACTTGAGATACGGCACAAGATAGCAGAGCTGGAGGCCAACCTCAACGGTGACCTTGCAGGCAGTGAGTGGAAAACCCGGTACGAGACCCA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000061099.14 ENSMUST00000118963.9 |
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| CDS CAA 72 bp | AGGTCACCGTTGAGGTTGGCCTCCAGCTCTGCTATCTaGTGCCGTATCTCAAGTGTGGAGAGCTGCACAACA | + |
|
Preference number: 6 (lower is better) Translates to: RSPLRLASSSAI*CRISSVESCTT Trigger: TGTTGTGCAGCTCTCCACACTTGAGATACGGCACAAGATAGCAGAGCTGGAGGCCAACCTCAACGGTGACCT 54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000061099.14 ENSMUST00000118963.9 |
||
| CDS CAA 72 bp | GTTTTCCACTCACTGCCTGCAAGGTCACCGTTGAGGTaGGCCTCCAGCTCTGCTATCTTGTGCCGTATCTCA | + |
|
Preference number: 6 (lower is better) Translates to: VFHSLPARSPLR*ASSSAILCRIS Trigger: TGAGATACGGCACAAGATAGCAGAGCTGGAGGCCAACCTCAACGGTGACCTTGCAGGCAGTGAGTGGAAAAC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000061099.14 ENSMUST00000118963.9 |
||
| CDS CCA 72 bp | ATCTCAAGTGTGGAGAGCTGCACAACATCCTTCATGTaGATTTCCTCCAGCAGCTCCAGCTTCAGGCGGTCT | + |
|
Preference number: 6 (lower is better) Translates to: ISSVESCTTSFM*ISSSSSSFRRS Trigger: AGACCGCCTGAAGCTGGAGCTGCTGGAGGAAATCCACATGAAGGATGTTGTGCAGCTCTCCACACTTGAGAT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000061099.14 ENSMUST00000118963.9 |
||
| CDS TCA 72 bp | GGAACGGCGCTCATTGTTGGTCCTGTGGTATGCCTTTaGCTCCTGCTCCAGTCTAAACGCATATTCTTTCAC | + |
|
Preference number: 6 (lower is better) Translates to: GTALIVGPVVCL*LLLQSKRIFFH Trigger: GTGAAAGAATATGCGTTTAGACTGGAGCAGGAGTCAAAGGCATACCACAGGACCAACAATGAGCGCCGTTCC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000052904.11 ENSMUST00000061099.14 ENSMUST00000118963.9 ENSMUST00000159904.8 ENSMUST00000161120.2 |
||
| CDS CCA 72 bp | CCTCCAGCTCTGCTATCTTGTGCCGTATCTCAAGTGTaGAGAGCTGCACAACATCCTTCATGTGGATTTCCT | + |
|
Preference number: 6 (lower is better) Translates to: PPALLSCAVSQV*RAAQHPSCGFP Trigger: AGGAAATCCACATGAAGGATGTTGTGCAGCTCTCCACACTTGAGATACGGCACAAGATAGCAGAGCTGGAGG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000061099.14 ENSMUST00000118963.9 |
||
| CDS CAA 90 bp | CTCTTCTTCTTTGGCCTTCTCTGGACATGGTCCAGCATGGAGAATTaGGTTTTCACCGGACTTTCCTTCATTCTAGGCAGTGGGTCCATC | + |
|
Preference number: 6 (lower is better) Translates to: LFFFGLLWTWSSMEN*VFTGLSFILGSGSI Trigger: GATGGACCCACTGCCTAGAATGAAGGAAAGTCCGGTGAAAACCAAATTCTCCATGCTGGACCATGTCCAGAGAAGGCCAAAGAAGAAGAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000118963.9 |
||
| CDS TCA 72 bp | CAGTGGGTCCATCTGTTGCCTCTTGGATACTTGATTTaGGCCAGAAACCTGAGTCATTTCCGCGATGTAGGA | + |
|
Preference number: 6 (lower is better) Translates to: QWVHLLPLGYLI*ARNLSHFRDVG Trigger: TCCTACATCGCGGAAATGACTCAGGTTTCTGGCTCAAATCAAGTATCCAAGAGGCAACAGATGGACCCACTG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000052904.11 ENSMUST00000061099.14 ENSMUST00000118963.9 |
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| CDS CCA 72 bp | ACTGCAAAGCTCTTCTTCTTTGGCCTTCTCTGGACATaGTCCAGCATGGAGAATTTGGTTTTCACCGGACTT | + |
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Preference number: 6 (lower is better) Translates to: TAKLFFFGLLWT*SSMENLVFTGL Trigger: AAGTCCGGTGAAAACCAAATTCTCCATGCTGGACCATGTCCAGAGAAGGCCAAAGAAGAAGAGCTTTGCAGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000118963.9 |
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| CDS CAA 72 bp | TTTGGCCTTCTCTGGACATGGTCCAGCATGGAGAATTaGGTTTTCACCGGACTTTCCTTCATTCTAGGCAGT | + |
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Preference number: 6 (lower is better) Translates to: FGLLWTWSSMEN*VFTGLSFILGS Trigger: ACTGCCTAGAATGAAGGAAAGTCCGGTGAAAACCAAATTCTCCATGCTGGACCATGTCCAGAGAAGGCCAAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000118963.9 |
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| CDS CCA 72 bp | TCTTCTTCTTTGGCCTTCTCTGGACATGGTCCAGCATaGAGAATTTGGTTTTCACCGGACTTTCCTTCATTC | + |
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Preference number: 6 (lower is better) Translates to: SSSLAFSGHGPA*RIWFSPDFPSF Trigger: GAATGAAGGAAAGTCCGGTGAAAACCAAATTCTCCATGCTGGACCATGTCCAGAGAAGGCCAAAGAAGAAGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000118963.9 |
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| CDS CAA 72 bp | CATTTTCTCTTTCAGAGACACTATTTGCTTTTCCAATaGGTCATTCAGCTCCAGCTGGGTCTCGTACCGGGT | + |
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Preference number: 6 (lower is better) Translates to: HFLFQRHYLLFQ*VIQLQLGLVPG Trigger: ACCCGGTACGAGACCCAGCTGGAGCTGAATGACCAATTGGAAAAGCAAATAGTGTCTCTGAAAGAGAAAATG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000061099.14 ENSMUST00000118963.9 |
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