Pregenerated sensors for CCDC166 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000098176Ensembl transcript IDs: ENSMUST00000182172.2, ENSMUST00000183130.3
Found 126 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | CCCGTTGTCCGCCTTGAGGGCCTGTGCGTGGGAAATGAGGGAACGTaGGGCCTCCCGCTCGGAGCGGCGCGTCAGGGACTGCACTTGCAG | + |
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Preference number: 1 (lower is better) Translates to: PVVRLEGLCVGNEGT*GLPLGAARQGLHLQ Trigger: CTGCAAGTGCAGTCCCTGACGCGCCGCTCCGAGCGGGAGGCCGCACGTTCCCTCATTTCCCACGCACAGGCCCTCAAGGCGGACAACGGG 69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000182172.2 |
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| 3UTR GCA 90 bp | GAACGTGCGGCCTCCCGCTCGGAGCGGCGCGTCAGGGACTGCACTTaGAGCCGCGCCTCCCGCTCGAAAGCCGTCTTCTCATCTAGGAAG | + |
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Preference number: 1 (lower is better) Translates to: ERAASRSERRVRDCT*SRASRSKAVFSSRK Trigger: CTTCCTAGATGAGAAGACGGCTTTCGAGCGGGAGGCGCGGCTGCAAGTGCAGTCCCTGACGCGCCGCTCCGAGCGGGAGGCCGCACGTTC 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000182172.2 |
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| 3UTR GCA 90 bp | ATGAGGGAACGTGCGGCCTCCCGCTCGGAGCGGCGCGTCAGGGACTaGACTTGCAGCCGCGCCTCCCGCTCGAAAGCCGTCTTCTCATCT | + |
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Preference number: 1 (lower is better) Translates to: MRERAASRSERRVRD*TCSRASRSKAVFSS Trigger: AGATGAGAAGACGGCTTTCGAGCGGGAGGCGCGGCTGCAAGTGCAGTCCCTGACGCGCCGCTCCGAGCGGGAGGCCGCACGTTCCCTCAT 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000182172.2 |
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| 3UTR CCA 90 bp | AGTTCTTGTCGGAGATACCCGTTGTCCGCCTTGAGGGCCTGTGCGTaGGAAATGAGGGAACGTGCGGCCTCCCGCTCGGAGCGGCGCGTC | + |
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Preference number: 1 (lower is better) Translates to: SSCRRYPLSALRACA*EMRERAASRSERRV Trigger: GACGCGCCGCTCCGAGCGGGAGGCCGCACGTTCCCTCATTTCCCACGCACAGGCCCTCAAGGCGGACAACGGGTATCTCCGACAAGAACT 66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000182172.2 |
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| 3UTR GCA 90 bp | TGGAGCCCTTGCGTGACGGGGTCGCGGATGAGACACGCGAGTCCTTaGGTGATGGAGTCAGAGATGAGACTCGAGATCCTGGATGTGATG | + |
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Preference number: 1 (lower is better) Translates to: WSPCVTGSRMRHASP*VMESEMRLEILDVM Trigger: CATCACATCCAGGATCTCGAGTCTCATCTCTGACTCCATCACGCAAGGACTCGCGTGTCTCATCCGCGACCCCGTCACGCAAGGGCTCCA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000182172.2 |
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| 3UTR CCA 90 bp | GGCTGTGGGAAGCTTGGAACTGGACTTTGCAGGTGTGTCAATTTCTaGAGAGACCTCACGCAAGGAGGGCTGTGGAGAGATCCGAGAGCC | + |
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Preference number: 1 (lower is better) Translates to: GCGKLGTGLCRCVNF*RDLTQGGLWRDPRA Trigger: GGCTCTCGGATCTCTCCACAGCCCTCCTTGCGTGAGGTCTCTCCAGAAATTGACACACCTGCAAAGTCCAGTTCCAAGCTTCCCACAGCC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000182172.2 |
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| 3UTR CCA 90 bp | AAGGTTTGTCCTCCACCCTATGCCCTACTGGCCTGCCTCCTCGTGTaGGTTCAGGCTTGCTCCAAGACAGTTTCTGTGTCGTCTTCAGCG | + |
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Preference number: 1 (lower is better) Translates to: KVCPPPYALLACLLV*VQACSKTVSVSSSA Trigger: CGCTGAAGACGACACAGAAACTGTCTTGGAGCAAGCCTGAACCCACACGAGGAGGCAGGCCAGTAGGGCATAGGGTGGAGGACAAACCTT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000182172.2 |
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| 3UTR TCA 90 bp | TCTTCAGCGTTTTCTGCCTCCTCCAACTGTGGGCTGAGAGGGGCCTaGTCTTCCAACAGGGCTGTGGGAAGCTTGGAACTGGACTTTGCA | + |
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Preference number: 1 (lower is better) Translates to: SSAFSASSNCGLRGA*SSNRAVGSLELDFA Trigger: TGCAAAGTCCAGTTCCAAGCTTCCCACAGCCCTGTTGGAAGATCAGGCCCCTCTCAGCCCACAGTTGGAGGAGGCAGAAAACGCTGAAGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000182172.2 |
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| 3UTR GCA 90 bp | TCAGGCTTGCTCCAAGACAGTTTCTGTGTCGTCTTCAGCGTTTTCTaGCTCCTCCAACTGTGGGCTGAGAGGGGCCTGATCTTCCAACAG | + |
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Preference number: 1 (lower is better) Translates to: SGLLQDSFCVVFSVF*LLQLWAERGLIFQQ Trigger: CTGTTGGAAGATCAGGCCCCTCTCAGCCCACAGTTGGAGGAGGCAGAAAACGCTGAAGACGACACAGAAACTGTCTTGGAGCAAGCCTGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000182172.2 |
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| 3UTR CCA 90 bp | GCACCAAGAAATCTTCCAAGGTTTGTCCTCCACCCTATGCCCTACTaGCCTGCCTCCTCGTGTGGGTTCAGGCTTGCTCCAAGACAGTTT | + |
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Preference number: 1 (lower is better) Translates to: APRNLPRFVLHPMPY*PASSCGFRLAPRQF Trigger: AAACTGTCTTGGAGCAAGCCTGAACCCACACGAGGAGGCAGGCCAGTAGGGCATAGGGTGGAGGACAAACCTTGGAAGATTTCTTGGTGC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000182172.2 |
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| 3UTR CCA 90 bp | CACTACCCAACTTTCCCTAAGCCTGCCTGCCTTGCTGGCTGTTGGTaGAAGAACATCGAATTCCAGCAGCCAAGGATACAACCAGCTCTG | + |
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Preference number: 1 (lower is better) Translates to: HYPTFPKPACLAGCW*KNIEFQQPRIQPAL Trigger: CAGAGCTGGTTGTATCCTTGGCTGCTGGAATTCGATGTTCTTCCACCAACAGCCAGCAAGGCAGGCAGGCTTAGGGAAAGTTGGGTAGTG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000182172.2 ENSMUST00000183130.3 |
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| 3UTR GCA 90 bp | CCTCTGCTGCTGAAATTACACTACCCAACTTTCCCTAAGCCTGCCTaGCTTGCTGGCTGTTGGTGGAAGAACATCGAATTCCAGCAGCCA | + |
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Preference number: 1 (lower is better) Translates to: PLLLKLHYPTFPKPA*LAGCWWKNIEFQQP Trigger: TGGCTGCTGGAATTCGATGTTCTTCCACCAACAGCCAGCAAGGCAGGCAGGCTTAGGGAAAGTTGGGTAGTGTAATTTCAGCAGCAGAGG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000182172.2 ENSMUST00000183130.3 |
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| 3UTR GCA 90 bp | CATTGGAAAAGCCCAGTAACTTCTCCCTGTGCTGAGAACAGAATCTaGCCTCTGCTGCTGAAATTACACTACCCAACTTTCCCTAAGCCT | + |
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Preference number: 1 (lower is better) Translates to: HWKSPVTSPCAENRI*PLLLKLHYPTFPKP Trigger: AGGCTTAGGGAAAGTTGGGTAGTGTAATTTCAGCAGCAGAGGGCAGATTCTGTTCTCAGCACAGGGAGAAGTTACTGGGCTTTTCCAATG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000182172.2 ENSMUST00000183130.3 |
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| 3UTR TCA 90 bp | GTATTATATAAAGCATTGGAAAAGCCCAGTAACTTCTCCCTGTGCTaGGAACAGAATCTGCCCTCTGCTGCTGAAATTACACTACCCAAC | + |
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Preference number: 1 (lower is better) Translates to: VLYKALEKPSNFSLC*EQNLPSAAEITLPN Trigger: GTTGGGTAGTGTAATTTCAGCAGCAGAGGGCAGATTCTGTTCTCAGCACAGGGAGAAGTTACTGGGCTTTTCCAATGCTTTATATAATAC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000182172.2 ENSMUST00000183130.3 |
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| 3UTR TCA 90 bp | TACAGTATTTTCTCCAAGGTGCATTTCCTAATTTTAATCATGTCTTaGAGAAAGTTGGGACAGGGCTTGGGCTGTAGCTCAGGAGGTAGC | + |
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Preference number: 1 (lower is better) Translates to: YSIFSKVHFLILIMS*RKLGQGLGCSSGGS Trigger: GCTACCTCCTGAGCTACAGCCCAAGCCCTGTCCCAACTTTCTTCAAGACATGATTAAAATTAGGAAATGCACCTTGGAGAAAATACTGTA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000182172.2 ENSMUST00000183130.3 |
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| 3UTR TCA 90 bp | TTAAAATTAAGGGGCATAACTGTCTCCAACAGAATCCCGGATGGCTaGAAGTACCAAATATATAACATGCATCCCTGTTCATCTAGATGG | + |
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Preference number: 1 (lower is better) Translates to: LKLRGITVSNRIPDG*KYQIYNMHPCSSRW Trigger: CCATCTAGATGAACAGGGATGCATGTTATATATTTGGTACTTTCAGCCATCCGGGATTCTGTTGGAGACAGTTATGCCCCTTAATTTTAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000182172.2 ENSMUST00000183130.3 |
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| 3UTR CCA 90 bp | ACCAAATATATAACATGCATCCCTGTTCATCTAGATGGGTGGCAATaGGAATTCCTAATAATTCTTGCAGTGTTCCCTAAATTGGAATGT | + |
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Preference number: 1 (lower is better) Translates to: TKYITCIPVHLDGWQ*EFLIILAVFPKLEC Trigger: ACATTCCAATTTAGGGAACACTGCAAGAATTATTAGGAATTCCCATTGCCACCCATCTAGATGAACAGGGATGCATGTTATATATTTGGT 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000182172.2 ENSMUST00000183130.3 |
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| 3UTR CCA 90 bp | GAAAGTACCAAATATATAACATGCATCCCTGTTCATCTAGATGGGTaGCAATGGGAATTCCTAATAATTCTTGCAGTGTTCCCTAAATTG | + |
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Preference number: 1 (lower is better) Translates to: ESTKYITCIPVHLDG*QWEFLIILAVFPKL Trigger: CAATTTAGGGAACACTGCAAGAATTATTAGGAATTCCCATTGCCACCCATCTAGATGAACAGGGATGCATGTTATATATTTGGTACTTTC 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000182172.2 ENSMUST00000183130.3 |
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| 3UTR-3UTR TCA 90 bp | AATCTTCCAAGGTTTGTCCTCCACCCTATGCCCTACTGGCCTGCCTCCTCGTGTGGGCTGAGAGGGGCCTaGTCTTCCAACAGGGCTGTG | + |
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Preference number: 2 (lower is better) Translates to: NLPRFVLHPMPYWPASSCGLRGA*SSNRAV Trigger: CACAGCCCTGTTGGAAGATCAGGCCCCTCTCAGCCC...ACACGAGGAGGCAGGCCAGTAGGGCATAGGGTGGAGGACAAACCTTGGAAGATT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000182172.2 |
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| 3UTR-3UTR TCA 90 bp | GTTCAGGCTTGCTCCAAGACAGTTTCTGTGTCGTCTTCAGCGTTTTCTGCCTCCCCTGTGCGTGGGAAATaGGGGAACGTGCGGCCTCCC | + |
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Preference number: 2 (lower is better) Translates to: VQACSKTVSVSSSAFSASPVRGK*GNVRPP Trigger: GGGAGGCCGCACGTTCCCTCATTTCCCACGCACAGG...GGAGGCAGAAAACGCTGAAGACGACACAGAAACTGTCTTGGAGCAAGCCTGAAC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000182172.2 |
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| 3UTR-3UTR GCA 90 bp | AGCTCTGCTGTAGCTCGAATAGCAGGCCTCTGCTCACTTGAAATACAAGGGCATTGCTCCCGGCGCAGCTaGTCCCGCTGCTCTAGCAGC | + |
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Preference number: 2 (lower is better) Translates to: SSAVARIAGLCSLEIQGHCSRRS*SRCSSS Trigger: GCTGCTAGAGCAGCGGGAGCAGCTGCGCCGGGAGCA...ATGCCCTTGTATTTCAAGTGAGCAGAGGCCTGCTATTCGAGCTACAGCAGAGCT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000182172.2 |
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| 3UTR-3UTR GCA 90 bp | TCCCTAAGCCTGCCTGCCTTGCTGGCTGTTGGTGGAAGAACATCGAATTCCAGCGACTGGTTGACCCGATaGGCAAGCTGGGTTGGAGGC | + |
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Preference number: 2 (lower is better) Translates to: SLSLPALLAVGGRTSNSSDWLTR*ASWVGG Trigger: GCCTCCAACCCAGCTTGCGCATCGGGTCAACCAGTC...GCTGGAATTCGATGTTCTTCCACCAACAGCCAGCAAGGCAGGCAGGCTTAGGGA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000182172.2 |
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| 3UTR-3UTR CCA 90 bp | CAGGGCTGTGGGAAGCTTGGAACTGGACTTTGCAGGTGTGTCAATTTCTGGAGATTGGAGGCTTTGGGGTaGCTGCCAGAGCGGTGGCCC | + |
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Preference number: 2 (lower is better) Translates to: QGCGKLGTGLCRCVNFWRLEALG*LPERWP Trigger: GGGCCACCGCTCTGGCAGCCACCCCAAAGCCTCCAA...TCTCCAGAAATTGACACACCTGCAAAGTCCAGTTCCAAGCTTCCCACAGCCCTG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000182172.2 |
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| 3UTR-3UTR CCA 90 bp | TCCCTAAGCCTGCCTGCCTTGCTGGCTGTTGGTGGAAGAACATCGAATTCCAGCACCCGATGCGCAAGCTaGGTTGGAGGCTTTGGGGTG | + |
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Preference number: 2 (lower is better) Translates to: SLSLPALLAVGGRTSNSSTRCAS*VGGFGV Trigger: CACCCCAAAGCCTCCAACCCAGCTTGCGCATCGGGT...GCTGGAATTCGATGTTCTTCCACCAACAGCCAGCAAGGCAGGCAGGCTTAGGGA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000182172.2 |
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| 3UTR-3UTR CCA 90 bp | AGTTGGGACAGGGCTTGGGCTGTAGCTCAGGAGGTAGCCCTGGGTTCAACACCCCTTGCTGGCTGTTGGTaGAAGAACATCGAATTCCAG | + |
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Preference number: 2 (lower is better) Translates to: SWDRAWAVAQEVALGSTPLAGCW*KNIEFQ Trigger: CTGGAATTCGATGTTCTTCCACCAACAGCCAGCAAG...GGGTGTTGAACCCAGGGCTACCTCCTGAGCTACAGCCCAAGCCCTGTCCCAACT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000182172.2 ENSMUST00000183130.3 |
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| 3UTR-3UTR TCA 90 bp | TTAATCTCAGCACTGAAGAGACAGAGGCAGGAGGATCTCTTGGATTCAAGGCCAACCCGTTGTCCGCCTTaGGGGCCTGTGCGTGGGAAA | + |
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Preference number: 2 (lower is better) Translates to: LISALKRQRQEDLLDSRPTRCPP*GPVRGK Trigger: TTTCCCACGCACAGGCCCTCAAGGCGGACAACGGGT...TGGCCTTGAATCCAAGAGATCCTCCTGCCTCTGTCTCTTCAGTGCTGAGATTAA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000182172.2 |
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| 3UTR-3UTR GCA 90 bp | AGAGACAGAGGCAGGAGGATCTCTTGGATTCAAGGCCAGCCTGACCTATACAGAAGACACGCGAGTCCTTaGGTGATGGAGTCAGAGATG | + |
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Preference number: 2 (lower is better) Translates to: RDRGRRISWIQGQPDLYRRHASP*VMESEM Trigger: CATCTCTGACTCCATCACGCAAGGACTCGCGTGTCT...TCTGTATAGGTCAGGCTGGCCTTGAATCCAAGAGATCCTCCTGCCTCTGTCTCT 52% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000182172.2 |
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| 3UTR-3UTR CCA 90 bp | TGTGTGTGCGTATTATATAAAGCATTGGAAAAGCCCAGTAACTTCTCCCTGTGCCTGGGTTGGAGGCTTTaGGGTGGCTGCCAGAGCGGT | + |
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Preference number: 2 (lower is better) Translates to: CVCVLYKALEKPSNFSLCLGWRL*GGCQSG Trigger: ACCGCTCTGGCAGCCACCCCAAAGCCTCCAACCCAG...GCACAGGGAGAAGTTACTGGGCTTTTCCAATGCTTTATATAATACGCACACACA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000182172.2 |
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| 3UTR-3UTR CCA 90 bp | GTGGATGCCTTTAATCTCAGCACTGAAGAGACAGAGGCAGGAGGATCTCTTGGAACTGGACAATATAGATaGAGTCTTGGAGGGTCGGTG | + |
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Preference number: 2 (lower is better) Translates to: VDAFNLSTEETEAGGSLGTGQYR*SLGGSV Trigger: CACCGACCCTCCAAGACTCCATCTATATTGTCCAGT...TCCAAGAGATCCTCCTGCCTCTGTCTCTTCAGTGCTGAGATTAAAGGCATCCAC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000182172.2 |
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| 3UTR CAA 90 bp | AACACTTTTATTAACATATCTATGCACCAAGAAATCTTCCAAGGTTaGTCCTCCACCCTATGCCCTACTGGCCTGCCTCCTCGTGTGGGT | + |
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Preference number: 2 (lower is better) Translates to: NTFINISMHQEIFQG*SSTLCPTGLPPRVG Trigger: ACCCACACGAGGAGGCAGGCCAGTAGGGCATAGGGTGGAGGACAAACCTTGGAAGATTTCTTGGTGCATAGATATGTTAATAAAAGTGTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000182172.2 ENSMUST00000183130.3 |
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| 3UTR-3UTR CCA 90 bp | TCCTATTCAGTAAACACAGGGATATATTTAAAATTAAGGGGCATAACTGTCTCCATGTCCTGCAGTAACTaGGTCCTCTGGAGAAGTCTC | + |
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Preference number: 2 (lower is better) Translates to: SYSVNTGIYLKLRGITVSMSCSN*VLWRSL Trigger: GAGACTTCTCCAGAGGACCCAGTTACTGCAGGACAT...GGAGACAGTTATGCCCCTTAATTTTAAATATATCCCTGTGTTTACTGAATAGGA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000182172.2 |
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| 3UTR-3UTR GCA 90 bp | TCCTATTCAGTAAACACAGGGATATATTTAAAATTAAGGGGCATAACTGTCTCCCGAATAGCAGGCCTCTaGTCACTTGAAATACAAGGG | + |
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Preference number: 2 (lower is better) Translates to: SYSVNTGIYLKLRGITVSRIAGL*SLEIQG Trigger: CCCTTGTATTTCAAGTGAGCAGAGGCCTGCTATTCG...GGAGACAGTTATGCCCCTTAATTTTAAATATATCCCTGTGTTTACTGAATAGGA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000182172.2 ENSMUST00000183130.3 |
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| 3UTR-3UTR GCA 90 bp | TCCTATTCAGTAAACACAGGGATATATTTAAAATTAAGGGGCATAACTGTCTCCCTTGGAACTGGACTTTaGAGGTGTGTCAATTTCTGG | + |
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Preference number: 2 (lower is better) Translates to: SYSVNTGIYLKLRGITVSLGTGL*RCVNFW Trigger: CCAGAAATTGACACACCTGCAAAGTCCAGTTCCAAG...GGAGACAGTTATGCCCCTTAATTTTAAATATATCCCTGTGTTTACTGAATAGGA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000182172.2 |
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| 3UTR GCA 72 bp | CGTGCGGCCTCCCGCTCGGAGCGGCGCGTCAGGGACTaGACTTGCAGCCGCGCCTCCCGCTCGAAAGCCGTC | + |
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Preference number: 3 (lower is better) Translates to: RAASRSERRVRD*TCSRASRSKAV Trigger: GACGGCTTTCGAGCGGGAGGCGCGGCTGCAAGTGCAGTCCCTGACGCGCCGCTCCGAGCGGGAGGCCGCACG 75% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000182172.2 |
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| 3UTR GCA 72 bp | GCCTCCCGCTCGGAGCGGCGCGTCAGGGACTGCACTTaGAGCCGCGCCTCCCGCTCGAAAGCCGTCTTCTCA | + |
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Preference number: 3 (lower is better) Translates to: ASRSERRVRDCT*SRASRSKAVFS Trigger: TGAGAAGACGGCTTTCGAGCGGGAGGCGCGGCTGCAAGTGCAGTCCCTGACGCGCCGCTCCGAGCGGGAGGC 71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000182172.2 |
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| 3UTR GCA 72 bp | CGCCTTGAGGGCCTGTGCGTGGGAAATGAGGGAACGTaGGGCCTCCCGCTCGGAGCGGCGCGTCAGGGACTG | + |
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Preference number: 3 (lower is better) Translates to: RLEGLCVGNEGT*GLPLGAARQGL Trigger: CAGTCCCTGACGCGCCGCTCCGAGCGGGAGGCCGCACGTTCCCTCATTTCCCACGCACAGGCCCTCAAGGCG 71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000182172.2 |
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| 3UTR GCA 72 bp | TGCTCCCGGCGCAGCTGCTCCCGCTGCTCTAGCAGCTaGTGTCGCATGTCCTGCAGTAACTGGGTCCTCTGG | + |
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Preference number: 3 (lower is better) Translates to: CSRRSCSRCSSS*CRMSCSNWVLW Trigger: CCAGAGGACCCAGTTACTGCAGGACATGCGACAGCAGCTGCTAGAGCAGCGGGAGCAGCTGCGCCGGGAGCA 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000182172.2 |
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| 3UTR GCA 72 bp | TTGTCGGAGATACCCGTTGTCCGCCTTGAGGGCCTGTaGGTGGGAAATGAGGGAACGTGCGGCCTCCCGCTC | + |
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Preference number: 3 (lower is better) Translates to: LSEIPVVRLEGL*VGNEGTCGLPL Trigger: GAGCGGGAGGCCGCACGTTCCCTCATTTCCCACGCACAGGCCCTCAAGGCGGACAACGGGTATCTCCGACAA 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000182172.2 |
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| 3UTR GCA 72 bp | TCCAGGTTCTTCAAGTCCACATGCTCCCGGCGCAGCTaGTCCCGCTGCTCTAGCAGCTGCTGTCGCATGTCC | + |
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Preference number: 3 (lower is better) Translates to: SRFFKSTCSRRS*SRCSSSCCRMS Trigger: GGACATGCGACAGCAGCTGCTAGAGCAGCGGGAGCAGCTGCGCCGGGAGCATGTGGACTTGAAGAACCTGGA 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000182172.2 |
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| 3UTR GCA 72 bp | CAGCCGTGCATTTGCTCCAGGTTCTTCAAGTCCACATaGTCCCGGCGCAGCTGCTCCCGCTGCTCTAGCAGC | + |
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Preference number: 3 (lower is better) Translates to: QPCICSRFFKST*SRRSCSRCSSS Trigger: GCTGCTAGAGCAGCGGGAGCAGCTGCGCCGGGAGCATGTGGACTTGAAGAACCTGGAGCAAATGCACGGCTG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000182172.2 |
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| 3UTR CCA 72 bp | GTCAATTTCTGGAGAGACCTCACGCAAGGAGGGCTGTaGAGAGATCCGAGAGCCCTCGCGCGACCGCAAGGT | + |
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Preference number: 3 (lower is better) Translates to: VNFWRDLTQGGL*RDPRALARPQG Trigger: ACCTTGCGGTCGCGCGAGGGCTCTCGGATCTCTCCACAGCCCTCCTTGCGTGAGGTCTCTCCAGAAATTGAC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000182172.2 |
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| 3UTR CCA 72 bp | AATCTTCCAAGGTTTGTCCTCCACCCTATGCCCTACTaGCCTGCCTCCTCGTGTGGGTTCAGGCTTGCTCCA | + |
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Preference number: 3 (lower is better) Translates to: NLPRFVLHPMPY*PASSCGFRLAP Trigger: TGGAGCAAGCCTGAACCCACACGAGGAGGCAGGCCAGTAGGGCATAGGGTGGAGGACAAACCTTGGAAGATT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000182172.2 |
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| 3UTR GCA 72 bp | CTCCAAGACAGTTTCTGTGTCGTCTTCAGCGTTTTCTaGCTCCTCCAACTGTGGGCTGAGAGGGGCCTGATC | + |
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Preference number: 3 (lower is better) Translates to: LQDSFCVVFSVF*LLQLWAERGLI Trigger: GATCAGGCCCCTCTCAGCCCACAGTTGGAGGAGGCAGAAAACGCTGAAGACGACACAGAAACTGTCTTGGAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000182172.2 |
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| 3UTR-3UTR CAA 90 bp | GCCAGCCTGACCTATACAGACCCTTTCTATAAAGGAAAGGACAGACCAGCACAAGATGCGCAAGCTGGGTaGGAGGCTTTGGGGTGGCTG | + |
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Preference number: 3 (lower is better) Translates to: ASLTYTDPFYKGKDRPAQDAQAG*EALGWL Trigger: CAGCCACCCCAAAGCCTCCAACCCAGCTTGCGCATC...TTGTGCTGGTCTGTCCTTTCCTTTATAGAAAGGGTCTGTATAGGTCAGGCTGGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000182172.2 |
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| 3UTR-3UTR CAA 90 bp | GAGGTGGTGGTGGATGCCTTTAATCTCAGCACTGAAGAGACAGAGGCAGGAGGAAGGGCTGTGGGAAGCTaGGAACTGGACTTTGCAGGT | + |
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Preference number: 3 (lower is better) Translates to: EVVVDAFNLSTEETEAGGRAVGS*ELDFAG Trigger: ACCTGCAAAGTCCAGTTCCAAGCTTCCCACAGCCCT...TCCTCCTGCCTCTGTCTCTTCAGTGCTGAGATTAAAGGCATCCACCACCACCTC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000182172.2 |
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| 3UTR CCA 72 bp | GAGGGGCCTGATCTTCCAACAGGGCTGTGGGAAGCTTaGAACTGGACTTTGCAGGTGTGTCAATTTCTGGAG | + |
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Preference number: 3 (lower is better) Translates to: EGPDLPTGLWEA*NWTLQVCQFLE Trigger: CTCCAGAAATTGACACACCTGCAAAGTCCAGTTCCAAGCTTCCCACAGCCCTGTTGGAAGATCAGGCCCCTC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000182172.2 |
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| 3UTR-3UTR CAA 90 bp | CACAGGGATATATTTAAAATTAAGGGGCATAACTGTCTCCAACAGAATCCCGGACGTCAGGGACTGCACTaGCAGCCGCGCCTCCCGCTC | + |
|
Preference number: 3 (lower is better) Translates to: HRDIFKIKGHNCLQQNPGRQGLH*QPRLPL Trigger: GAGCGGGAGGCGCGGCTGCAAGTGCAGTCCCTGACG...TCCGGGATTCTGTTGGAGACAGTTATGCCCCTTAATTTTAAATATATCCCTGTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000182172.2 |
||
| 3UTR TCA 72 bp | GATGGACTCCGGAGAGCAATCACTGACCCAGCCTTCTaGGATAGGCCCGGAAGAGACTCACTGGACAATATA | + |
|
Preference number: 3 (lower is better) Translates to: DGLRRAITDPAF*DRPGRDSLDNI Trigger: TATATTGTCCAGTGAGTCTCTTCCGGGCCTATCTCAGAAGGCTGGGTCAGTGATTGCTCTCCGGAGTCCATC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000182172.2 |
||
| 3UTR TCA 72 bp | CTCTGCTGTAGCTCGAATAGCAGGCCTCTGCTCACTTaGAATACAAGGGCATCGACCCAGGCAAGTGTCAGA | + |
|
Preference number: 3 (lower is better) Translates to: LCCSSNSRPLLT*NTRASTQASVR Trigger: TCTGACACTTGCCTGGGTCGATGCCCTTGTATTTCAAGTGAGCAGAGGCCTGCTATTCGAGCTACAGCAGAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000182172.2 ENSMUST00000183130.3 |
||
| 3UTR GCA 72 bp | ACAACCAGCTCTGCTGTAGCTCGAATAGCAGGCCTCTaGTCACTTGAAATACAAGGGCATCGACCCAGGCAA | + |
|
Preference number: 3 (lower is better) Translates to: TTSSAVARIAGL*SLEIQGHRPRQ Trigger: TTGCCTGGGTCGATGCCCTTGTATTTCAAGTGAGCAGAGGCCTGCTATTCGAGCTACAGCAGAGCTGGTTGT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000182172.2 ENSMUST00000183130.3 |
||
| 3UTR CCA 72 bp | CCAACTTTCCCTAAGCCTGCCTGCCTTGCTGGCTGTTaGTGGAAGAACATCGAATTCCAGCAGCCAAGGATA | + |
|
Preference number: 3 (lower is better) Translates to: PTFPKPACLAGC*WKNIEFQQPRI Trigger: TATCCTTGGCTGCTGGAATTCGATGTTCTTCCACCAACAGCCAGCAAGGCAGGCAGGCTTAGGGAAAGTTGG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000182172.2 ENSMUST00000183130.3 |
||
| 3UTR-3UTR CAA 90 bp | AATCTTCCAAGGTTTGTCCTCCACCCTATGCCCTACTGGCCTGCCTCCTCGTGTAATATAGATGGAGTCTaGGAGGGTCGGTGTGACAGA | + |
|
Preference number: 3 (lower is better) Translates to: NLPRFVLHPMPYWPASSCNIDGV*EGRCDR Trigger: TCTGTCACACCGACCCTCCAAGACTCCATCTATATT...ACACGAGGAGGCAGGCCAGTAGGGCATAGGGTGGAGGACAAACCTTGGAAGATT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000182172.2 |
||
| 3UTR-3UTR CAA 90 bp | AGCCCAGTAACTTCTCCCTGTGCTGAGAACAGAATCTGCCCTCTGCTGCTGAAACGTGTGGGTTCAGGCTaGCTCCAAGACAGTTTCTGT | + |
|
Preference number: 3 (lower is better) Translates to: SPVTSPCAENRICPLLLKRVGSG*LQDSFC Trigger: ACAGAAACTGTCTTGGAGCAAGCCTGAACCCACACG...TTTCAGCAGCAGAGGGCAGATTCTGTTCTCAGCACAGGGAGAAGTTACTGGGCT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000182172.2 |
||
| 3UTR-3UTR CAA 90 bp | AGCTCTGCTGTAGCTCGAATAGCAGGCCTCTGCTCACTTGAAATACAAGGGCATCAACCAGCCGTGCATTaGCTCCAGGTTCTTCAAGTC | + |
|
Preference number: 3 (lower is better) Translates to: SSAVARIAGLCSLEIQGHQPAVH*LQVLQV Trigger: GACTTGAAGAACCTGGAGCAAATGCACGGCTGGTTG...ATGCCCTTGTATTTCAAGTGAGCAGAGGCCTGCTATTCGAGCTACAGCAGAGCT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000182172.2 |
||
| 3UTR TCA 72 bp | CTCCCTGTGCTGAGAACAGAATCTGCCCTCTGCTGCTaGAATTACACTACCCAACTTTCCCTAAGCCTGCCT | + |
|
Preference number: 3 (lower is better) Translates to: LPVLRTESALCC*NYTTQLSLSLP Trigger: AGGCAGGCTTAGGGAAAGTTGGGTAGTGTAATTTCAGCAGCAGAGGGCAGATTCTGTTCTCAGCACAGGGAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000182172.2 ENSMUST00000183130.3 |
||
| 3UTR GCA 72 bp | TTCCAACAGGGCTGTGGGAAGCTTGGAACTGGACTTTaGAGGTGTGTCAATTTCTGGAGAGACCTCACGCAA | + |
|
Preference number: 3 (lower is better) Translates to: FQQGCGKLGTGL*RCVNFWRDLTQ Trigger: TTGCGTGAGGTCTCTCCAGAAATTGACACACCTGCAAAGTCCAGTTCCAAGCTTCCCACAGCCCTGTTGGAA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000182172.2 |
||
| 3UTR CCA 72 bp | ACTTTCCCTAAGCCTGCCTGCCTTGCTGGCTGTTGGTaGAAGAACATCGAATTCCAGCAGCCAAGGATACAA | + |
|
Preference number: 3 (lower is better) Translates to: TFPKPACLAGCW*KNIEFQQPRIQ Trigger: TTGTATCCTTGGCTGCTGGAATTCGATGTTCTTCCACCAACAGCCAGCAAGGCAGGCAGGCTTAGGGAAAGT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000182172.2 ENSMUST00000183130.3 |
||
| 3UTR TCA 72 bp | CAGAGGCAGGAGGATCTCTTGGATTCAAGGCCAGCCTaGCCTATACAGACCCTTTCTATAAAGGAAAGGACA | + |
|
Preference number: 3 (lower is better) Translates to: QRQEDLLDSRPA*PIQTLSIKERT Trigger: TGTCCTTTCCTTTATAGAAAGGGTCTGTATAGGTCAGGCTGGCCTTGAATCCAAGAGATCCTCCTGCCTCTG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000182172.2 ENSMUST00000183130.3 |
||
| 3UTR GCA 72 bp | CTGAAATTACACTACCCAACTTTCCCTAAGCCTGCCTaGCTTGCTGGCTGTTGGTGGAAGAACATCGAATTC | + |
|
Preference number: 3 (lower is better) Translates to: LKLHYPTFPKPA*LAGCWWKNIEF Trigger: GAATTCGATGTTCTTCCACCAACAGCCAGCAAGGCAGGCAGGCTTAGGGAAAGTTGGGTAGTGTAATTTCAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000182172.2 ENSMUST00000183130.3 |
||
| 3UTR GCA 72 bp | AGCCCAGTAACTTCTCCCTGTGCTGAGAACAGAATCTaGCCTCTGCTGCTGAAATTACACTACCCAACTTTC | + |
|
Preference number: 3 (lower is better) Translates to: SPVTSPCAENRI*PLLLKLHYPTF Trigger: GAAAGTTGGGTAGTGTAATTTCAGCAGCAGAGGGCAGATTCTGTTCTCAGCACAGGGAGAAGTTACTGGGCT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000182172.2 ENSMUST00000183130.3 |
||
| 3UTR-3UTR CAA 90 bp | TGTGTGTGCGTATTATATAAAGCATTGGAAAAGCCCAGTAACTTCTCCCTGTGCCAGGCCTCTGCTCACTaGAAATACAAGGGCATCGAC | + |
|
Preference number: 3 (lower is better) Translates to: CVCVLYKALEKPSNFSLCQASAH*KYKGID Trigger: GTCGATGCCCTTGTATTTCAAGTGAGCAGAGGCCTG...GCACAGGGAGAAGTTACTGGGCTTTTCCAATGCTTTATATAATACGCACACACA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000182172.2 ENSMUST00000183130.3 |
||
| 3UTR TCA 72 bp | AAAGCATTGGAAAAGCCCAGTAACTTCTCCCTGTGCTaGGAACAGAATCTGCCCTCTGCTGCTGAAATTACA | + |
|
Preference number: 3 (lower is better) Translates to: KALEKPSNFSLC*EQNLPSAAEIT Trigger: TGTAATTTCAGCAGCAGAGGGCAGATTCTGTTCTCAGCACAGGGAGAAGTTACTGGGCTTTTCCAATGCTTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000182172.2 ENSMUST00000183130.3 |
||
| 3UTR TCA 72 bp | AGGGGCATAACTGTCTCCAACAGAATCCCGGATGGCTaGAAGTACCAAATATATAACATGCATCCCTGTTCA | + |
|
Preference number: 3 (lower is better) Translates to: RGITVSNRIPDG*KYQIYNMHPCS Trigger: TGAACAGGGATGCATGTTATATATTTGGTACTTTCAGCCATCCGGGATTCTGTTGGAGACAGTTATGCCCCT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000182172.2 ENSMUST00000183130.3 |
||
| 3UTR TCA 72 bp | TTCTCCAAGGTGCATTTCCTAATTTTAATCATGTCTTaGAGAAAGTTGGGACAGGGCTTGGGCTGTAGCTCA | + |
|
Preference number: 3 (lower is better) Translates to: FSKVHFLILIMS*RKLGQGLGCSS Trigger: TGAGCTACAGCCCAAGCCCTGTCCCAACTTTCTTCAAGACATGATTAAAATTAGGAAATGCACCTTGGAGAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000182172.2 ENSMUST00000183130.3 |
||
| 3UTR CCA 72 bp | ATAACATGCATCCCTGTTCATCTAGATGGGTGGCAATaGGAATTCCTAATAATTCTTGCAGTGTTCCCTAAA | + |
|
Preference number: 3 (lower is better) Translates to: ITCIPVHLDGWQ*EFLIILAVFPK Trigger: TTTAGGGAACACTGCAAGAATTATTAGGAATTCCCATTGCCACCCATCTAGATGAACAGGGATGCATGTTAT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000182172.2 ENSMUST00000183130.3 |
||
| 3UTR CCA 72 bp | AAATATATAACATGCATCCCTGTTCATCTAGATGGGTaGCAATGGGAATTCCTAATAATTCTTGCAGTGTTC | + |
|
Preference number: 3 (lower is better) Translates to: KYITCIPVHLDG*QWEFLIILAVF Trigger: GAACACTGCAAGAATTATTAGGAATTCCCATTGCCACCCATCTAGATGAACAGGGATGCATGTTATATATTT 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000182172.2 ENSMUST00000183130.3 |
||
| 3UTR CCA 72 bp | TACCAAATATATAACATGCATCCCTGTTCATCTAGATaGGTGGCAATGGGAATTCCTAATAATTCTTGCAGT | + |
|
Preference number: 3 (lower is better) Translates to: YQIYNMHPCSSR*VAMGIPNNSCS Trigger: ACTGCAAGAATTATTAGGAATTCCCATTGCCACCCATCTAGATGAACAGGGATGCATGTTATATATTTGGTA 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000182172.2 ENSMUST00000183130.3 |
||
| CDS-3UTR CCA 90 bp | CTTCCAAGGTTTGTCCTCCACCCTATGCCCTACTGGCCTGCCTCCTCGTGTGGGCGTCGCTTCACCCCGTaGAGGAGCTGCGTGTGCTCC | + |
|
Preference number: 4 (lower is better) Translates to: LPRFVLHPMPYWPASSCGRRFTP*RSCVCS Trigger: GGAGCACACGCAGCTCCTCCACGGGGTGAAGCGACG...CCCACACGAGGAGGCAGGCCAGTAGGGCATAGGGTGGAGGACAAACCTTGGAAG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000183130.3 |
||
| CDS-3UTR TCA 90 bp | AGTTGGGACAGGGCTTGGGCTGTAGCTCAGGAGGTAGCCCTGGGTTCAACACCCGGGCTGAGAGGGGCCTaGTCTTCCAACAGGGCTGTG | + |
|
Preference number: 4 (lower is better) Translates to: SWDRAWAVAQEVALGSTPGLRGA*SSNRAV Trigger: CACAGCCCTGTTGGAAGATCAGGCCCCTCTCAGCCC...GGGTGTTGAACCCAGGGCTACCTCCTGAGCTACAGCCCAAGCCCTGTCCCAACT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000183130.3 |
||
| CDS-3UTR CCA 90 bp | CTTTCCCTAAGCCTGCCTGCCTTGCTGGCTGTTGGTGGAAGAACATCGAATTCCGGGTGGGGTGAGGGTTaGGGAGCAGGGGGCGCCGAT | + |
|
Preference number: 4 (lower is better) Translates to: LSLSLPALLAVGGRTSNSGWGEG*GAGGAD Trigger: ATCGGCGCCCCCTGCTCCCCAACCCTCACCCCACCC...GGAATTCGATGTTCTTCCACCAACAGCCAGCAAGGCAGGCAGGCTTAGGGAAAG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000182172.2 |
||
| CDS-3UTR TCA 90 bp | GCCTGCCTGCCTTGCTGGCTGTTGGTGGAAGAACATCGAATTCCAGCAGCCAAGGGCCACCAGGCTTTCTaGGAGCAACGCGTACTCGCG | + |
|
Preference number: 4 (lower is better) Translates to: ACLPCWLLVEEHRIPAAKGHQAF*EQRVLA Trigger: CGCGAGTACGCGTTGCTCTCAGAAAGCCTGGTGGCC...CTTGGCTGCTGGAATTCGATGTTCTTCCACCAACAGCCAGCAAGGCAGGCAGGC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000182172.2 ENSMUST00000183130.3 |
||
| CDS-3UTR GCA 90 bp | TATGCCCTACTGGCCTGCCTCCTCGTGTGGGTTCAGGCTTGCTCCAAGACAGTTCGCTGCCACCGGATCTaGGCCAGATCCATGCGGTTC | + |
|
Preference number: 4 (lower is better) Translates to: YALLACLLVWVQACSKTVRCHRI*ARSMRF Trigger: GAACCGCATGGATCTGGCGCAGATCCGGTGGCAGCG...AACTGTCTTGGAGCAAGCCTGAACCCACACGAGGAGGCAGGCCAGTAGGGCATA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000182172.2 |
||
| CDS-3UTR TCA 90 bp | AATCTTCCAAGGTTTGTCCTCCACCCTATGCCCTACTGGCCTGCCTCCTCGTGTGGCCACCAGGCTTTCTaGGAGCAACGCGTACTCGCG | + |
|
Preference number: 4 (lower is better) Translates to: NLPRFVLHPMPYWPASSCGHQAF*EQRVLA Trigger: CGCGAGTACGCGTTGCTCTCAGAAAGCCTGGTGGCC...ACACGAGGAGGCAGGCCAGTAGGGCATAGGGTGGAGGACAAACCTTGGAAGATT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000182172.2 ENSMUST00000183130.3 |
||
| CDS-3UTR GCA 90 bp | CCAACTTTCCCTAAGCCTGCCTGCCTTGCTGGCTGTTGGTGGAAGAACATCGAATCGCGCTGTAGGTACTaGGCGCGCTCCGAGAGCGGT | + |
|
Preference number: 4 (lower is better) Translates to: PTFPKPACLAGCWWKNIESRCRY*ARSESG Trigger: ACCGCTCTCGGAGCGCGCGCAGTACCTACAGCGCGA...TTCGATGTTCTTCCACCAACAGCCAGCAAGGCAGGCAGGCTTAGGGAAAGTTGG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000182172.2 ENSMUST00000183130.3 |
||
| CDS-3UTR GCA 90 bp | GAGGTGGTGGTGGATGCCTTTAATCTCAGCACTGAAGAGACAGAGGCAGGAGGATCGCGCTGTAGGTACTaGGCGCGCTCCGAGAGCGGT | + |
|
Preference number: 4 (lower is better) Translates to: EVVVDAFNLSTEETEAGGSRCRY*ARSESG Trigger: ACCGCTCTCGGAGCGCGCGCAGTACCTACAGCGCGA...TCCTCCTGCCTCTGTCTCTTCAGTGCTGAGATTAAAGGCATCCACCACCACCTC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000182172.2 ENSMUST00000183130.3 |
||
| CDS-3UTR TCA 90 bp | AATCTTCCAAGGTTTGTCCTCCACCCTATGCCCTACTGGCCTGCCTCCTCGTGTCCTCCAACTGTGGGCTaGGAGGGGCCTGATCTTCCA | + |
|
Preference number: 4 (lower is better) Translates to: NLPRFVLHPMPYWPASSCPPTVG*EGPDLP Trigger: TGGAAGATCAGGCCCCTCTCAGCCCACAGTTGGAGG...ACACGAGGAGGCAGGCCAGTAGGGCATAGGGTGGAGGACAAACCTTGGAAGATT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000183130.3 |
||
| CDS-3UTR GCA 90 bp | AATCTTCCAAGGTTTGTCCTCCACCCTATGCCCTACTGGCCTGCCTCCTCGTGTGACTGGTTGACCCGATaGGCAAGCTGGGTTGGAGGC | + |
|
Preference number: 4 (lower is better) Translates to: NLPRFVLHPMPYWPASSCDWLTR*ASWVGG Trigger: GCCTCCAACCCAGCTTGCGCATCGGGTCAACCAGTC...ACACGAGGAGGCAGGCCAGTAGGGCATAGGGTGGAGGACAAACCTTGGAAGATT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000183130.3 |
||
| CDS-3UTR CCA 90 bp | AATCTTCCAAGGTTTGTCCTCCACCCTATGCCCTACTGGCCTGCCTCCTCGTGTATGCGCAAGCTGGGTTaGAGGCTTTGGGGTGGCTGC | + |
|
Preference number: 4 (lower is better) Translates to: NLPRFVLHPMPYWPASSCMRKLG*RLWGGC Trigger: GCAGCCACCCCAAAGCCTCCAACCCAGCTTGCGCAT...ACACGAGGAGGCAGGCCAGTAGGGCATAGGGTGGAGGACAAACCTTGGAAGATT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000183130.3 |
||
| CDS-3UTR TCA 90 bp | GTGGATGCCTTTAATCTCAGCACTGAAGAGACAGAGGCAGGAGGATCTCTTGGACCTGTGCGTGGGAAATaGGGGAACGTGCGGCCTCCC | + |
|
Preference number: 4 (lower is better) Translates to: VDAFNLSTEETEAGGSLGPVRGK*GNVRPP Trigger: GGGAGGCCGCACGTTCCCTCATTTCCCACGCACAGG...TCCAAGAGATCCTCCTGCCTCTGTCTCTTCAGTGCTGAGATTAAAGGCATCCAC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000183130.3 |
||
| CDS-3UTR GCA 90 bp | AGCCCAGTAACTTCTCCCTGTGCTGAGAACAGAATCTGCCCTCTGCTGCTGAAACGCTGCCACCGGATCTaGGCCAGATCCATGCGGTTC | + |
|
Preference number: 4 (lower is better) Translates to: SPVTSPCAENRICPLLLKRCHRI*ARSMRF Trigger: GAACCGCATGGATCTGGCGCAGATCCGGTGGCAGCG...TTTCAGCAGCAGAGGGCAGATTCTGTTCTCAGCACAGGGAGAAGTTACTGGGCT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000182172.2 ENSMUST00000183130.3 |
||
| CDS-3UTR GCA 90 bp | ATCTCAGCACTGAAGAGACAGAGGCAGGAGGATCTCTTGGATTCAAGGCCAGCCCGCCTTGAGGGCCTGTaGGTGGGAAATGAGGGAACG | + |
|
Preference number: 4 (lower is better) Translates to: ISALKRQRQEDLLDSRPARLEGL*VGNEGT Trigger: CGTTCCCTCATTTCCCACGCACAGGCCCTCAAGGCG...GGCTGGCCTTGAATCCAAGAGATCCTCCTGCCTCTGTCTCTTCAGTGCTGAGAT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000183130.3 |
||
| CDS-3UTR TCA 90 bp | AAATTACACTACCCAACTTTCCCTAAGCCTGCCTGCCTTGCTGGCTGTTGGTGGTTCATTTCCTGCAGCTaGGCGCGCACCCCGTCCTCA | + |
|
Preference number: 4 (lower is better) Translates to: KLHYPTFPKPACLAGCWWFISCS*ARTPSS Trigger: TGAGGACGGGGTGCGCGCTCAGCTGCAGGAAATGAA...CCACCAACAGCCAGCAAGGCAGGCAGGCTTAGGGAAAGTTGGGTAGTGTAATTT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000182172.2 ENSMUST00000183130.3 |
||
| CDS-3UTR GCA 90 bp | AGCTCTGCTGTAGCTCGAATAGCAGGCCTCTGCTCACTTGAAATACAAGGGCATTGGAGGAGCTGCGTGTaGTCCACGCGCATGTGCAGC | + |
|
Preference number: 4 (lower is better) Translates to: SSAVARIAGLCSLEIQGHWRSCV*STRMCS Trigger: GCTGCACATGCGCGTGGAGCACACGCAGCTCCTCCA...ATGCCCTTGTATTTCAAGTGAGCAGAGGCCTGCTATTCGAGCTACAGCAGAGCT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000182172.2 ENSMUST00000183130.3 |
||
| CDS-3UTR CCA 90 bp | AGTTGGGACAGGGCTTGGGCTGTAGCTCAGGAGGTAGCCCTGGGTTCAACACCCACTGGACAATATAGATaGAGTCTTGGAGGGTCGGTG | + |
|
Preference number: 4 (lower is better) Translates to: SWDRAWAVAQEVALGSTPTGQYR*SLGGSV Trigger: CACCGACCCTCCAAGACTCCATCTATATTGTCCAGT...GGGTGTTGAACCCAGGGCTACCTCCTGAGCTACAGCCCAAGCCCTGTCCCAACT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000183130.3 |
||
| CDS-3UTR CCA 90 bp | AAATTACACTACCCAACTTTCCCTAAGCCTGCCTGCCTTGCTGGCTGTTGGTGGACGCAAGGAGGGCTGTaGAGAGATCCGAGAGCCCTC | + |
|
Preference number: 4 (lower is better) Translates to: KLHYPTFPKPACLAGCWWTQGGL*RDPRAL Trigger: GAGGGCTCTCGGATCTCTCCACAGCCCTCCTTGCGT...CCACCAACAGCCAGCAAGGCAGGCAGGCTTAGGGAAAGTTGGGTAGTGTAATTT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000183130.3 |
||
| 3UTR CAA 72 bp | CCCGGAAGAGACTCACTGGACAATATAGATGGAGTCTaGGAGGGTCGGTGTGACAGATCCATGGATTGGCCC | + |
|
Preference number: 4 (lower is better) Translates to: PGRDSLDNIDGV*EGRCDRSMDWP Trigger: GGGCCAATCCATGGATCTGTCACACCGACCCTCCAAGACTCCATCTATATTGTCCAGTGAGTCTCTTCCGGG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000182172.2 |
||
| CDS-3UTR GCA 90 bp | TGTGTGTGCGTATTATATAAAGCATTGGAAAAGCCCAGTAACTTCTCCCTGTGCTGCTCCCGGCGCAGCTaGTCCCGCTGCTCTAGCAGC | + |
|
Preference number: 4 (lower is better) Translates to: CVCVLYKALEKPSNFSLCCSRRS*SRCSSS Trigger: GCTGCTAGAGCAGCGGGAGCAGCTGCGCCGGGAGCA...GCACAGGGAGAAGTTACTGGGCTTTTCCAATGCTTTATATAATACGCACACACA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000183130.3 |
||
| CDS-3UTR GCA 90 bp | CTGTCTCCAACAGAATCCCGGATGGCTGAAAGTACCAAATATATAACATGCATCGCCAGCTGCTCCAGCTaGAGCTCCTACATGGGGTGG | + |
|
Preference number: 4 (lower is better) Translates to: LSPTESRMAESTKYITCIASCSS*SSYMGW Trigger: CCACCCCATGTAGGAGCTGCAGCTGGAGCAGCTGGC...GATGCATGTTATATATTTGGTACTTTCAGCCATCCGGGATTCTGTTGGAGACAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000182172.2 |
||
| CDS-3UTR TCA 90 bp | GCTGAAAGTACCAAATATATAACATGCATCCCTGTTCATCTAGATGGGTGGCAATTCATTTCCTGCAGCTaGGCGCGCACCCCGTCCTCA | + |
|
Preference number: 4 (lower is better) Translates to: AESTKYITCIPVHLDGWQFISCS*ARTPSS Trigger: TGAGGACGGGGTGCGCGCTCAGCTGCAGGAAATGAA...TTGCCACCCATCTAGATGAACAGGGATGCATGTTATATATTTGGTACTTTCAGC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000182172.2 ENSMUST00000183130.3 |
||
| CDS-3UTR CCA 90 bp | GGGCATCGACCCAGGCAAGTGTCAGAGCGTCACAGAGCTTATTTAACACTTTTAATGTCCTGCAGTAACTaGGTCCTCTGGAGAAGTCTC | + |
|
Preference number: 4 (lower is better) Translates to: GHRPRQVSERHRAYLTLLMSCSN*VLWRSL Trigger: GAGACTTCTCCAGAGGACCCAGTTACTGCAGGACAT...TAAAAGTGTTAAATAAGCTCTGTGACGCTCTGACACTTGCCTGGGTCGATGCCC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000183130.3 |
||
| CDS-3UTR CCA 90 bp | TACCAAATATATAACATGCATCCCTGTTCATCTAGATGGGTGGCAATGGGAATTCTGGGTTGGAGGCTTTaGGGTGGCTGCCAGAGCGGT | + |
|
Preference number: 4 (lower is better) Translates to: YQIYNMHPCSSRWVAMGILGWRL*GGCQSG Trigger: ACCGCTCTGGCAGCCACCCCAAAGCCTCCAACCCAG...AATTCCCATTGCCACCCATCTAGATGAACAGGGATGCATGTTATATATTTGGTA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000183130.3 |
||
| CDS-3UTR GCA 90 bp | ACCCAGGTAAGATCCATAGCTAGCTACAGACACCACAGGGACAATTTGGCCAGTCTTGGAACTGGACTTTaGAGGTGTGTCAATTTCTGG | + |
|
Preference number: 4 (lower is better) Translates to: TQVRSIASYRHHRDNLASLGTGL*RCVNFW Trigger: CCAGAAATTGACACACCTGCAAAGTCCAGTTCCAAG...ACTGGCCAAATTGTCCCTGTGGTGTCTGTAGCTAGCTATGGATCTTACCTGGGT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000183130.3 |
||
| CDS-3UTR CCA 90 bp | TCCTATTCAGTAAACACAGGGATATATTTAAAATTAAGGGGCATAACTGTCTCCTTGGAGGCTTTGGGGTaGCTGCCAGAGCGGTGGCCC | + |
|
Preference number: 4 (lower is better) Translates to: SYSVNTGIYLKLRGITVSLEALG*LPERWP Trigger: GGGCCACCGCTCTGGCAGCCACCCCAAAGCCTCCAA...GGAGACAGTTATGCCCCTTAATTTTAAATATATCCCTGTGTTTACTGAATAGGA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000183130.3 |
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| CDS-3UTR CCA 90 bp | TACCAAATATATAACATGCATCCCTGTTCATCTAGATGGGTGGCAATGGGAATTACCCGATGCGCAAGCTaGGTTGGAGGCTTTGGGGTG | + |
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Preference number: 4 (lower is better) Translates to: YQIYNMHPCSSRWVAMGITRCAS*VGGFGV Trigger: CACCCCAAAGCCTCCAACCCAGCTTGCGCATCGGGT...AATTCCCATTGCCACCCATCTAGATGAACAGGGATGCATGTTATATATTTGGTA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000183130.3 |
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| CDS-3UTR CCA 90 bp | CTGTCTCCAACAGAATCCCGGATGGCTGAAAGTACCAAATATATAACATGCATCAGGTACCAGAGGTCATaGATGGAACCCTGGAGCCCT | + |
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Preference number: 4 (lower is better) Translates to: LSPTESRMAESTKYITCIRYQRS*MEPWSP Trigger: AGGGCTCCAGGGTTCCATCCATGACCTCTGGTACCT...GATGCATGTTATATATTTGGTACTTTCAGCCATCCGGGATTCTGTTGGAGACAG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000183130.3 |
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| CDS-3UTR TCA 90 bp | TCCTATTCAGTAAACACAGGGATATATTTAAAATTAAGGGGCATAACTGTCTCCACCCGTTGTCCGCCTTaGGGGCCTGTGCGTGGGAAA | + |
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Preference number: 4 (lower is better) Translates to: SYSVNTGIYLKLRGITVSTRCPP*GPVRGK Trigger: TTTCCCACGCACAGGCCCTCAAGGCGGACAACGGGT...GGAGACAGTTATGCCCCTTAATTTTAAATATATCCCTGTGTTTACTGAATAGGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000183130.3 |
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| CDS-3UTR GCA 90 bp | TGTGTGTGCGTATTATATAAAGCATTGGAAAAGCCCAGTAACTTCTCCCTGTGCGTCTTCAGCGTTTTCTaGCTCCTCCAACTGTGGGCT | + |
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Preference number: 4 (lower is better) Translates to: CVCVLYKALEKPSNFSLCVFSVF*LLQLWA Trigger: AGCCCACAGTTGGAGGAGGCAGAAAACGCTGAAGAC...GCACAGGGAGAAGTTACTGGGCTTTTCCAATGCTTTATATAATACGCACACACA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000183130.3 |
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| CDS-3UTR CCA 90 bp | TGTGTGTGCGTATTATATAAAGCATTGGAAAAGCCCAGTAACTTCTCCCTGTGCCTTCCAACAGGGCTGTaGGAAGCTTGGAACTGGACT | + |
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Preference number: 4 (lower is better) Translates to: CVCVLYKALEKPSNFSLCLPTGL*EAWNWT Trigger: AGTCCAGTTCCAAGCTTCCCACAGCCCTGTTGGAAG...GCACAGGGAGAAGTTACTGGGCTTTTCCAATGCTTTATATAATACGCACACACA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000183130.3 |
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| CDS-3UTR GCA 90 bp | ACTTTTATTAACATATCTATGCACCAAGAAATCTTCCAAGGTTTGTCCTCCACCTTCTTCAAGTCCACATaGTCCCGGCGCAGCTGCTCC | + |
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Preference number: 4 (lower is better) Translates to: TFINISMHQEIFQGLSSTFFKST*SRRSCS Trigger: GGAGCAGCTGCGCCGGGAGCATGTGGACTTGAAGAA...GGTGGAGGACAAACCTTGGAAGATTTCTTGGTGCATAGATATGTTAATAAAAGT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000183130.3 |
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| CDS-3UTR GCA 90 bp | TGGCAATGGGAATTCCTAATAATTCTTGCAGTGTTCCCTAAATTGGAATGTATAAGACACGCGAGTCCTTaGGTGATGGAGTCAGAGATG | + |
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Preference number: 4 (lower is better) Translates to: WQWEFLIILAVFPKLECIRHASP*VMESEM Trigger: CATCTCTGACTCCATCACGCAAGGACTCGCGTGTCT...TATACATTCCAATTTAGGGAACACTGCAAGAATTATTAGGAATTCCCATTGCCA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000183130.3 |
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| CDS CCA 90 bp | AGCTCCGCTCGCTGCCACCGGATCTGCGCCAGATCCATGCGGTTCTaGTCTTCGACGCGCACGACGGCGTTGGCGCAGCGCAGAGCGTGC | + |
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Preference number: 5 (lower is better) Translates to: SSARCHRICARSMRF*SSTRTTALAQRRAC Trigger: GCACGCTCTGCGCTGCGCCAACGCCGTCGTGCGCGTCGAAGACCAGAACCGCATGGATCTGGCGCAGATCCGGTGGCAGCGAGCGGAGCT 69% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000182172.2 ENSMUST00000183130.3 |
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| CDS GCA 90 bp | AGGACGCTAGCTCCGCTCGCTGCCACCGGATCTGCGCCAGATCCATaGGGTTCTGGTCTTCGACGCGCACGACGGCGTTGGCGCAGCGCA | + |
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Preference number: 5 (lower is better) Translates to: RTLAPLAATGSAPDP*GSGLRRARRRWRSA Trigger: TGCGCTGCGCCAACGCCGTCGTGCGCGTCGAAGACCAGAACCGCATGGATCTGGCGCAGATCCGGTGGCAGCGAGCGGAGCTAGCGTCCT 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000182172.2 ENSMUST00000183130.3 |
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| CDS GCA 90 bp | GCCGTCTTCTCATCTAGGAAGCGTCGCTTCACCCCGTGGAGGAGCTaGGTGTGCTCCACGCGCATGTGCAGCAGCTCGCGCTCCAGGGTC | + |
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Preference number: 5 (lower is better) Translates to: AVFSSRKRRFTPWRS*VCSTRMCSSSRSRV Trigger: GACCCTGGAGCGCGAGCTGCTGCACATGCGCGTGGAGCACACGCAGCTCCTCCACGGGGTGAAGCGACGCTTCCTAGATGAGAAGACGGC 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000183130.3 |
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| CDS CCA 90 bp | GCGCCAGATCCATGCGGTTCTGGTCTTCGACGCGCACGACGGCGTTaGCGCAGCGCAGAGCGTGCGCGCTCACGTAACCGACATAAAGCC | + |
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Preference number: 5 (lower is better) Translates to: APDPCGSGLRRARRR*RSAERARSRNRHKA Trigger: GGCTTTATGTCGGTTACGTGAGCGCGCACGCTCTGCGCTGCGCCAACGCCGTCGTGCGCGTCGAAGACCAGAACCGCATGGATCTGGCGC 66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000182172.2 ENSMUST00000183130.3 |
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| CDS CCA 90 bp | CGCTCGAAAGCCGTCTTCTCATCTAGGAAGCGTCGCTTCACCCCGTaGAGGAGCTGCGTGTGCTCCACGCGCATGTGCAGCAGCTCGCGC | + |
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Preference number: 5 (lower is better) Translates to: RSKAVFSSRKRRFTP*RSCVCSTRMCSSSR Trigger: GCGCGAGCTGCTGCACATGCGCGTGGAGCACACGCAGCTCCTCCACGGGGTGAAGCGACGCTTCCTAGATGAGAAGACGGCTTTCGAGCG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000183130.3 |
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| CDS GCA 90 bp | AACGCGTACTCGCGCTGTAGGTACTGCGCGCGCTCCGAGAGCGGTTaGTCTGTAGTTTCCTGCTTGCGCCCCGCGTTTTGTCCGCGCTTC | + |
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Preference number: 5 (lower is better) Translates to: NAYSRCRYCARSESG*SVVSCLRPAFCPRF Trigger: GAAGCGCGGACAAAACGCGGGGCGCAAGCAGGAAACTACAGAGCAACCGCTCTCGGAGCGCGCGCAGTACCTACAGCGCGAGTACGCGTT 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000182172.2 ENSMUST00000183130.3 |
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| CDS GCA 90 bp | TCTTCGCGCAGGCGCTGCGCCTCTCTGTTCAGGAACTCGTTGTCCTaGAGCACCTCGTCGATCCGCTGCTCACAGGCCACCAGGCTTTCT | + |
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Preference number: 5 (lower is better) Translates to: SSRRRCASLFRNSLS*STSSIRCSQATRLS Trigger: AGAAAGCCTGGTGGCCTGTGAGCAGCGGATCGACGAGGTGCTGCAGGACAACGAGTTCCTGAACAGAGAGGCGCAGCGCCTGCGCGAAGA 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000182172.2 ENSMUST00000183130.3 |
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| CDS-3UTR CAA 90 bp | TCCTCCACCCTATGCCCTACTGGCCTGCCTCCTCGTGTGGGTTCAGGCTTGCTCTCTGTAGTTTCCTGCTaGCGCCCCGCGTTTTGTCCG | + |
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Preference number: 5 (lower is better) Translates to: SSTLCPTGLPPRVGSGLLSVVSC*RPAFCP Trigger: CGGACAAAACGCGGGGCGCAAGCAGGAAACTACAGA...GAGCAAGCCTGAACCCACACGAGGAGGCAGGCCAGTAGGGCATAGGGTGGAGGA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000182172.2 |
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| CDS-3UTR CAA 90 bp | GCCTGCCTGCCTTGCTGGCTGTTGGTGGAAGAACATCGAATTCCAGCAGCCAAGGCGCTCCGAGAGCGGTaGCTCTGTAGTTTCCTGCTT | + |
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Preference number: 5 (lower is better) Translates to: ACLPCWLLVEEHRIPAAKALRER*LCSFLL Trigger: AAGCAGGAAACTACAGAGCAACCGCTCTCGGAGCGC...CTTGGCTGCTGGAATTCGATGTTCTTCCACCAACAGCCAGCAAGGCAGGCAGGC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000182172.2 ENSMUST00000183130.3 |
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| CDS-3UTR CAA 90 bp | GCCAGCCTGACCTATACAGACCCTTTCTATAAAGGAAAGGACAGACCAGCACAACGTCAGGGACTGCACTaGCAGCCGCGCCTCCCGCTC | + |
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Preference number: 5 (lower is better) Translates to: ASLTYTDPFYKGKDRPAQRQGLH*QPRLPL Trigger: GAGCGGGAGGCGCGGCTGCAAGTGCAGTCCCTGACG...TTGTGCTGGTCTGTCCTTTCCTTTATAGAAAGGGTCTGTATAGGTCAGGCTGGC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000183130.3 |
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| CDS-3UTR CAA 90 bp | AATCTTCCAAGGTTTGTCCTCCACCCTATGCCCTACTGGCCTGCCTCCTCGTGTGCGCTCCGAGAGCGGTaGCTCTGTAGTTTCCTGCTT | + |
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Preference number: 5 (lower is better) Translates to: NLPRFVLHPMPYWPASSCALRER*LCSFLL Trigger: AAGCAGGAAACTACAGAGCAACCGCTCTCGGAGCGC...ACACGAGGAGGCAGGCCAGTAGGGCATAGGGTGGAGGACAAACCTTGGAAGATT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000182172.2 ENSMUST00000183130.3 |
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| CDS-3UTR CAA 90 bp | TTAATCTCAGCACTGAAGAGACAGAGGCAGGAGGATCTCTTGGATTCAAGGCCAGCTGGGTTGGAGGCTTaGGGGTGGCTGCCAGAGCGG | + |
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Preference number: 5 (lower is better) Translates to: LISALKRQRQEDLLDSRPAGLEA*GWLPER Trigger: CCGCTCTGGCAGCCACCCCAAAGCCTCCAACCCAGC...TGGCCTTGAATCCAAGAGATCCTCCTGCCTCTGTCTCTTCAGTGCTGAGATTAA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000183130.3 |
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| CDS-3UTR CAA 90 bp | AGAGACAGAGGCAGGAGGATCTCTTGGATTCAAGGCCAGCCTGACCTATACAGATCTGTAGTTTCCTGCTaGCGCCCCGCGTTTTGTCCG | + |
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Preference number: 5 (lower is better) Translates to: RDRGRRISWIQGQPDLYRSVVSC*RPAFCP Trigger: CGGACAAAACGCGGGGCGCAAGCAGGAAACTACAGA...TCTGTATAGGTCAGGCTGGCCTTGAATCCAAGAGATCCTCCTGCCTCTGTCTCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000182172.2 ENSMUST00000183130.3 |
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| CDS-3UTR CAA 90 bp | GCCTGCCTGCCTTGCTGGCTGTTGGTGGAAGAACATCGAATTCCAGCAGCCAAGAATATAGATGGAGTCTaGGAGGGTCGGTGTGACAGA | + |
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Preference number: 5 (lower is better) Translates to: ACLPCWLLVEEHRIPAAKNIDGV*EGRCDR Trigger: TCTGTCACACCGACCCTCCAAGACTCCATCTATATT...CTTGGCTGCTGGAATTCGATGTTCTTCCACCAACAGCCAGCAAGGCAGGCAGGC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000183130.3 |
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| CDS-3UTR CAA 90 bp | GTGGATGCCTTTAATCTCAGCACTGAAGAGACAGAGGCAGGAGGATCTCTTGGAAGGGCTGTGGGAAGCTaGGAACTGGACTTTGCAGGT | + |
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Preference number: 5 (lower is better) Translates to: VDAFNLSTEETEAGGSLGRAVGS*ELDFAG Trigger: ACCTGCAAAGTCCAGTTCCAAGCTTCCCACAGCCCT...TCCAAGAGATCCTCCTGCCTCTGTCTCTTCAGTGCTGAGATTAAAGGCATCCAC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000183130.3 |
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| CDS-3UTR CAA 90 bp | ACCCAGGTAAGATCCATAGCTAGCTACAGACACCACAGGGACAATTTGGCCAGTCAACCAGCCGTGCATTaGCTCCAGGTTCTTCAAGTC | + |
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Preference number: 5 (lower is better) Translates to: TQVRSIASYRHHRDNLASQPAVH*LQVLQV Trigger: GACTTGAAGAACCTGGAGCAAATGCACGGCTGGTTG...ACTGGCCAAATTGTCCCTGTGGTGTCTGTAGCTAGCTATGGATCTTACCTGGGT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000183130.3 |
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| CDS-3UTR CAA 90 bp | GCTGAAAGTACCAAATATATAACATGCATCCCTGTTCATCTAGATGGGTGGCAAGATGCGCAAGCTGGGTaGGAGGCTTTGGGGTGGCTG | + |
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Preference number: 5 (lower is better) Translates to: AESTKYITCIPVHLDGWQDAQAG*EALGWL Trigger: CAGCCACCCCAAAGCCTCCAACCCAGCTTGCGCATC...TTGCCACCCATCTAGATGAACAGGGATGCATGTTATATATTTGGTACTTTCAGC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000183130.3 |
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| CDS CCA 72 bp | CGCTGCCACCGGATCTGCGCCAGATCCATGCGGTTCTaGTCTTCGACGCGCACGACGGCGTTGGCGCAGCGC | + |
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Preference number: 6 (lower is better) Translates to: RCHRICARSMRF*SSTRTTALAQR Trigger: GCGCTGCGCCAACGCCGTCGTGCGCGTCGAAGACCAGAACCGCATGGATCTGGCGCAGATCCGGTGGCAGCG 69% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000182172.2 ENSMUST00000183130.3 |
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| CDS CCA 72 bp | CCATGCGGTTCTGGTCTTCGACGCGCACGACGGCGTTaGCGCAGCGCAGAGCGTGCGCGCTCACGTAACCGA | + |
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Preference number: 6 (lower is better) Translates to: PCGSGLRRARRR*RSAERARSRNR Trigger: TCGGTTACGTGAGCGCGCACGCTCTGCGCTGCGCCAACGCCGTCGTGCGCGTCGAAGACCAGAACCGCATGG 68% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000182172.2 ENSMUST00000183130.3 |
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| CDS CAA 90 bp | CGGTTCTCTTCGCGCAGGCGCTGCGCCTCTCTGTTCAGGAACTCGTaGTCCTGCAGCACCTCGTCGATCCGCTGCTCACAGGCCACCAGG | + |
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Preference number: 6 (lower is better) Translates to: RFSSRRRCASLFRNS*SCSTSSIRCSQATR Trigger: CCTGGTGGCCTGTGAGCAGCGGATCGACGAGGTGCTGCAGGACAACGAGTTCCTGAACAGAGAGGCGCAGCGCCTGCGCGAAGAGAACCG 64% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000182172.2 ENSMUST00000183130.3 |
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| CDS CCA 72 bp | GCCGTCTTCTCATCTAGGAAGCGTCGCTTCACCCCGTaGAGGAGCTGCGTGTGCTCCACGCGCATGTGCAGC | + |
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Preference number: 6 (lower is better) Translates to: AVFSSRKRRFTP*RSCVCSTRMCS Trigger: GCTGCACATGCGCGTGGAGCACACGCAGCTCCTCCACGGGGTGAAGCGACGCTTCCTAGATGAGAAGACGGC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000183130.3 |
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| CDS CAA 72 bp | GCGCGCTCCGAGAGCGGTTGCTCTGTAGTTTCCTGCTaGCGCCCCGCGTTTTGTCCGCGCTTCTTCTTGGGC | + |
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Preference number: 6 (lower is better) Translates to: ARSESGCSVVSC*RPAFCPRFFLG Trigger: GCCCAAGAAGAAGCGCGGACAAAACGCGGGGCGCAAGCAGGAAACTACAGAGCAACCGCTCTCGGAGCGCGC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000182172.2 ENSMUST00000183130.3 |
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| CDS CAA 72 bp | TCGCGCAGGCGCTGCGCCTCTCTGTTCAGGAACTCGTaGTCCTGCAGCACCTCGTCGATCCGCTGCTCACAG | + |
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Preference number: 6 (lower is better) Translates to: SRRRCASLFRNS*SCSTSSIRCSQ Trigger: CTGTGAGCAGCGGATCGACGAGGTGCTGCAGGACAACGAGTTCCTGAACAGAGAGGCGCAGCGCCTGCGCGA 64% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000182172.2 ENSMUST00000183130.3 |
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| CDS GCA 72 bp | TGCGCGCGCTCCGAGAGCGGTTGCTCTGTAGTTTCCTaGTTGCGCCCCGCGTTTTGTCCGCGCTTCTTCTTG | + |
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Preference number: 6 (lower is better) Translates to: CARSESGCSVVS*LRPAFCPRFFL Trigger: CAAGAAGAAGCGCGGACAAAACGCGGGGCGCAAGCAGGAAACTACAGAGCAACCGCTCTCGGAGCGCGCGCA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000182172.2 ENSMUST00000183130.3 |
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| CDS GCA 72 bp | TCGCGCTGTAGGTACTGCGCGCGCTCCGAGAGCGGTTaGTCTGTAGTTTCCTGCTTGCGCCCCGCGTTTTGT | + |
|
Preference number: 6 (lower is better) Translates to: SRCRYCARSESG*SVVSCLRPAFC Trigger: ACAAAACGCGGGGCGCAAGCAGGAAACTACAGAGCAACCGCTCTCGGAGCGCGCGCAGTACCTACAGCGCGA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000182172.2 ENSMUST00000183130.3 |
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| CDS GCA 72 bp | CTTTCTGAGAGCAACGCGTACTCGCGCTGTAGGTACTaGGCGCGCTCCGAGAGCGGTTGCTCTGTAGTTTCC | + |
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Preference number: 6 (lower is better) Translates to: LSESNAYSRCRY*ARSESGCSVVS Trigger: GGAAACTACAGAGCAACCGCTCTCGGAGCGCGCGCAGTACCTACAGCGCGAGTACGCGTTGCTCTCAGAAAG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000182172.2 ENSMUST00000183130.3 |
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