Pregenerated sensors for CCDC163 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000028689Ensembl transcript IDs: ENSMUST00000030452.13, ENSMUST00000106462.9, ENSMUST00000106463.8, ENSMUST00000106464.3, ENSMUST00000125671.8, ENSMUST00000130828.8, ENSMUST00000135499.8, ENSMUST00000155391.8, ENSMUST00000156206.2
Found 131 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | GGAGAAGGACTGGCTGCACAGTGCGATGCCTCGGTAAAGAGGGCATaGACGGAGAGGATGAGGAGGCTGCCTGGGATAGAAGCTGCACCT | + |
|
Preference number: 1 (lower is better) Translates to: GEGLAAQCDASVKRA*TERMRRLPGIEAAP Trigger: AGGTGCAGCTTCTATCCCAGGCAGCCTCCTCATCCTCTCCGTTCATGCCCTCTTTACCGAGGCATCGCACTGTGCAGCCAGTCCTTCTCC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000030452.13 ENSMUST00000106462.9 ENSMUST00000106463.8 ENSMUST00000106464.3 ENSMUST00000155391.8 ENSMUST00000156206.2 |
||
| 3UTR TCA 90 bp | TCCTTCTGGGCATCATGGGCCTCTGTACTGGAAACCTCCAAGGTATaGACCCTGTCCATCTGGTCACTCTGCAGGTGCTCCAACTTCTTC | + |
|
Preference number: 1 (lower is better) Translates to: SFWASWASVLETSKV*TLSIWSLCRCSNFF Trigger: GAAGAAGTTGGAGCACCTGCAGAGTGACCAGATGGACAGGGTTCATACCTTGGAGGTTTCCAGTACAGAGGCCCATGATGCCCAGAAGGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000155391.8 |
||
| 3UTR CCA 90 bp | ACCTCATTTTTCTCACAAGTTCTTACAGGTCACTCTGGAAGATCGTaGGGCCCTCAAGGAACAGGTCCTCTTGCCCTAGACTCCAGGCAT | + |
|
Preference number: 1 (lower is better) Translates to: TSFFSQVLTGHSGRS*GPQGTGPLALDSRH Trigger: ATGCCTGGAGTCTAGGGCAAGAGGACCTGTTCCTTGAGGGCCCCACGATCTTCCAGAGTGACCTGTAAGAACTTGTGAGAAAAATGAGGT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000030452.13 ENSMUST00000155391.8 |
||
| 3UTR-3UTR CCA 90 bp | ATTAGCCAGGGAGAAGGACTGGCTGCACAGTGCGATGCCTCGGTAAAGAGGGCAGATGAGGAGGCTGCCTaGGATAGAAGCTGCACCTCA | + |
|
Preference number: 2 (lower is better) Translates to: ISQGEGLAAQCDASVKRADEEAA*DRSCTS Trigger: TGAGGTGCAGCTTCTATCCCAGGCAGCCTCCTCATC...TGCCCTCTTTACCGAGGCATCGCACTGTGCAGCCAGTCCTTCTCCCTGGCTAAT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000030452.13 ENSMUST00000106462.9 ENSMUST00000106463.8 ENSMUST00000106464.3 ENSMUST00000155391.8 ENSMUST00000156206.2 |
||
| 3UTR CAA 90 bp | CAACTTCTTCCAGCTGCGGGCCTGAACCTGGGGCCCTTTAGCTATTaGTTCCAGCAACAACTCCTGATGTTGGCTCAGCTGGTCTCGAAG | + |
|
Preference number: 2 (lower is better) Translates to: QLLPAAGLNLGPFSY*FQQQLLMLAQLVSK Trigger: CTTCGAGACCAGCTGAGCCAACATCAGGAGTTGTTGCTGGAACAAATAGCTAAAGGGCCCCAGGTTCAGGCCCGCAGCTGGAAGAAGTTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000155391.8 |
||
| 3UTR-3UTR TCA 90 bp | ACGGAGAGGATGAGGAGGCTGCCTGGGATAGAAGCTGCACCTCATTTTTCTCACTCGGTAAAGAGGGCATaGACGGAGAGGATGAGGAGG | + |
|
Preference number: 2 (lower is better) Translates to: TERMRRLPGIEAAPHFSHSVKRA*TERMRR Trigger: CCTCCTCATCCTCTCCGTTCATGCCCTCTTTACCGA...GTGAGAAAAATGAGGTGCAGCTTCTATCCCAGGCAGCCTCCTCATCCTCTCCGT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 6 transcripts: ENSMUST00000030452.13 ENSMUST00000106462.9 ENSMUST00000106463.8 ENSMUST00000106464.3 ENSMUST00000155391.8 ENSMUST00000156206.2 |
||
| 3UTR-3UTR GCA 90 bp | TGCACAGTGCGATGCCTCGGTAAAGAGGGCATGAACGGAGAGGATGAGGAGGCTGCCTGGGATAGAAGCTaGACCTCATTTTTCTCACAA | + |
|
Preference number: 2 (lower is better) Translates to: CTVRCLGKEGMNGEDEEAAWDRS*TSFFSQ Trigger: TTGTGAGAAAAATGAGGTGCAGCTTCTATCCCAGGC...AGCCTCCTCATCCTCTCCGTTCATGCCCTCTTTACCGAGGCATCGCACTGTGCA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 6 transcripts: ENSMUST00000030452.13 ENSMUST00000106462.9 ENSMUST00000106463.8 ENSMUST00000106464.3 ENSMUST00000155391.8 ENSMUST00000156206.2 |
||
| 3UTR-3UTR GCA 90 bp | ACGGAGAGGATGAGGAGGCTGCCTGGGATAGAAGCTGCACCTCATTTTTCTCACGCCTGGGATAGAAGCTaGACCTCATTTTTCTCACAA | + |
|
Preference number: 2 (lower is better) Translates to: TERMRRLPGIEAAPHFSHAWDRS*TSFFSQ Trigger: TTGTGAGAAAAATGAGGTGCAGCTTCTATCCCAGGC...GTGAGAAAAATGAGGTGCAGCTTCTATCCCAGGCAGCCTCCTCATCCTCTCCGT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 6 transcripts: ENSMUST00000030452.13 ENSMUST00000106462.9 ENSMUST00000106463.8 ENSMUST00000106464.3 ENSMUST00000155391.8 ENSMUST00000156206.2 |
||
| 3UTR-3UTR CCA 90 bp | AAGCTACTTTATTTTGAATTAGCCAGGGAGAAGGACTGGCTGCACAGTGCGATGGATGAGGAGGCTGCCTaGGATAGAAGCTGCACCTCA | + |
|
Preference number: 2 (lower is better) Translates to: KLLYFELAREKDWLHSAMDEEAA*DRSCTS Trigger: TGAGGTGCAGCTTCTATCCCAGGCAGCCTCCTCATC...CATCGCACTGTGCAGCCAGTCCTTCTCCCTGGCTAATTCAAAATAAAGTAGCTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000030452.13 ENSMUST00000106462.9 ENSMUST00000106463.8 ENSMUST00000106464.3 ENSMUST00000155391.8 ENSMUST00000156206.2 |
||
| 3UTR-3UTR GCA 90 bp | TTAGGAAGGGAGTTGTTCTGGAGTTCCCTATCCAATTTCTTTAAAAGTTCCCAGAGGAACAGGTCCTCTTaGCCTAGACTCCAGGCATGG | + |
|
Preference number: 2 (lower is better) Translates to: LGRELFWSSLSNFFKSSQRNRSS*PRLQAW Trigger: CCATGCCTGGAGTCTAGGGCAAGAGGACCTGTTCCT...CTGGGAACTTTTAAAGAAATTGGATAGGGAACTCCAGAACAACTCCCTTCCTAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000155391.8 |
||
| 3UTR TCA 72 bp | CTGGCTGCACAGTGCGATGCCTCGGTAAAGAGGGCATaGACGGAGAGGATGAGGAGGCTGCCTGGGATAGAA | + |
|
Preference number: 3 (lower is better) Translates to: LAAQCDASVKRA*TERMRRLPGIE Trigger: TTCTATCCCAGGCAGCCTCCTCATCCTCTCCGTTCATGCCCTCTTTACCGAGGCATCGCACTGTGCAGCCAG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000030452.13 ENSMUST00000106462.9 ENSMUST00000106463.8 ENSMUST00000106464.3 ENSMUST00000155391.8 ENSMUST00000156206.2 |
||
| 3UTR TCA 72 bp | CTCTGCAGGTGCTCCAACTTCTTCCAGCTGCGGGCCTaGACCTGGGGCCCTTTAGCTATTTGTTCCAGCAAC | + |
|
Preference number: 3 (lower is better) Translates to: LCRCSNFFQLRA*TWGPLAICSSN Trigger: GTTGCTGGAACAAATAGCTAAAGGGCCCCAGGTTCAGGCCCGCAGCTGGAAGAAGTTGGAGCACCTGCAGAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000155391.8 |
||
| 3UTR TCA 72 bp | GCATCATGGGCCTCTGTACTGGAAACCTCCAAGGTATaGACCCTGTCCATCTGGTCACTCTGCAGGTGCTCC | + |
|
Preference number: 3 (lower is better) Translates to: ASWASVLETSKV*TLSIWSLCRCS Trigger: GGAGCACCTGCAGAGTGACCAGATGGACAGGGTTCATACCTTGGAGGTTTCCAGTACAGAGGCCCATGATGC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000155391.8 |
||
| 3UTR CCA 72 bp | AGGGCTCTTCCTTCTGGGCATCATGGGCCTCTGTACTaGAAACCTCCAAGGTATGAACCCTGTCCATCTGGT | + |
|
Preference number: 3 (lower is better) Translates to: RALPSGHHGPLY*KPPRYEPCPSG Trigger: ACCAGATGGACAGGGTTCATACCTTGGAGGTTTCCAGTACAGAGGCCCATGATGCCCAGAAGGAAGAGCCCT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000155391.8 |
||
| 3UTR CCA 72 bp | TTCTCACAAGTTCTTACAGGTCACTCTGGAAGATCGTaGGGCCCTCAAGGAACAGGTCCTCTTGCCCTAGAC | + |
|
Preference number: 3 (lower is better) Translates to: FSQVLTGHSGRS*GPQGTGPLALD Trigger: GTCTAGGGCAAGAGGACCTGTTCCTTGAGGGCCCCACGATCTTCCAGAGTGACCTGTAAGAACTTGTGAGAA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000030452.13 ENSMUST00000155391.8 |
||
| 3UTR GCA 72 bp | AACGGAGAGGATGAGGAGGCTGCCTGGGATAGAAGCTaGACCTCATTTTTCTCACAAGTTCTTACAGGTCAC | + |
|
Preference number: 3 (lower is better) Translates to: NGEDEEAAWDRS*TSFFSQVLTGH Trigger: GTGACCTGTAAGAACTTGTGAGAAAAATGAGGTGCAGCTTCTATCCCAGGCAGCCTCCTCATCCTCTCCGTT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000030452.13 ENSMUST00000155391.8 |
||
| 3UTR CCA 72 bp | CACCTCATTTTTCTCACAAGTTCTTACAGGTCACTCTaGAAGATCGTGGGGCCCTCAAGGAACAGGTCCTCT | + |
|
Preference number: 3 (lower is better) Translates to: HLIFLTSSYRSL*KIVGPSRNRSS Trigger: AGAGGACCTGTTCCTTGAGGGCCCCACGATCTTCCAGAGTGACCTGTAAGAACTTGTGAGAAAAATGAGGTG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000030452.13 ENSMUST00000155391.8 |
||
| 3UTR CCA 72 bp | AAAGAGGGCATGAACGGAGAGGATGAGGAGGCTGCCTaGGATAGAAGCTGCACCTCATTTTTCTCACAAGTT | + |
|
Preference number: 3 (lower is better) Translates to: KEGMNGEDEEAA*DRSCTSFFSQV Trigger: AACTTGTGAGAAAAATGAGGTGCAGCTTCTATCCCAGGCAGCCTCCTCATCCTCTCCGTTCATGCCCTCTTT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 6 transcripts: ENSMUST00000030452.13 ENSMUST00000106462.9 ENSMUST00000106463.8 ENSMUST00000106464.3 ENSMUST00000155391.8 ENSMUST00000156206.2 |
||
| CDS-3UTR GCA 90 bp | GGCCCTCAAGGAACAGGTCCTCTTGCCCTAGACTCCAGGCATGGAACTGAGAGCCCAACTTCTTCCAGCTaGGGGCCTGAACCTGGGGCC | + |
|
Preference number: 4 (lower is better) Translates to: GPQGTGPLALDSRHGTESPTSSS*GPEPGA Trigger: GGCCCCAGGTTCAGGCCCGCAGCTGGAAGAAGTTGG...GCTCTCAGTTCCATGCCTGGAGTCTAGGGCAAGAGGACCTGTTCCTTGAGGGCC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000030452.13 |
||
| CDS-3UTR TCA 90 bp | ATTAGCCAGGGAGAAGGACTGGCTGCACAGTGCGATGCCTCGGTAAAGAGGGCACTCTGCAGCTCTTGGTaGAAGCCACTGGCAGGACCC | + |
|
Preference number: 4 (lower is better) Translates to: ISQGEGLAAQCDASVKRALCSSW*KPLAGP Trigger: GGGTCCTGCCAGTGGCTTTCACCAAGAGCTGCAGAG...TGCCCTCTTTACCGAGGCATCGCACTGTGCAGCCAGTCCTTCTCCCTGGCTAAT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000030452.13 ENSMUST00000106462.9 ENSMUST00000106463.8 ENSMUST00000106464.3 ENSMUST00000155391.8 |
||
| CDS-3UTR CCA 90 bp | AGGACTGGCTGCACAGTGCGATGCCTCGGTAAAGAGGGCATGAACGGAGAGGATGAAGGGCTCTCCCTTTaGGGCCCTCCTGCAGCAGTT | + |
|
Preference number: 4 (lower is better) Translates to: RTGCTVRCLGKEGMNGEDEGLSL*GPPAAV Trigger: AACTGCTGCAGGAGGGCCCCAAAGGGAGAGCCCTTC...ATCCTCTCCGTTCATGCCCTCTTTACCGAGGCATCGCACTGTGCAGCCAGTCCT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000030452.13 ENSMUST00000106462.9 ENSMUST00000106463.8 ENSMUST00000106464.3 ENSMUST00000155391.8 |
||
| CDS-3UTR GCA 90 bp | GGGAGAAGGACTGGCTGCACAGTGCGATGCCTCGGTAAAGAGGGCATGAACGGAAGGAACAGGTCCTCTTaGCCTAGACTCCAGGCATGG | + |
|
Preference number: 4 (lower is better) Translates to: GRRTGCTVRCLGKEGMNGRNRSS*PRLQAW Trigger: CCATGCCTGGAGTCTAGGGCAAGAGGACCTGTTCCT...TCCGTTCATGCCCTCTTTACCGAGGCATCGCACTGTGCAGCCAGTCCTTCTCCC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000106462.9 ENSMUST00000106463.8 ENSMUST00000106464.3 ENSMUST00000156206.2 |
||
| CDS-3UTR GCA 90 bp | GGCTGCACAGTGCGATGCCTCGGTAAAGAGGGCATGAACGGAGAGGATGAGGAGAGGAACAGGTCCTCTTaGCCTAGACTCCAGGCATGG | + |
|
Preference number: 4 (lower is better) Translates to: GCTVRCLGKEGMNGEDEERNRSS*PRLQAW Trigger: CCATGCCTGGAGTCTAGGGCAAGAGGACCTGTTCCT...CTCCTCATCCTCTCCGTTCATGCCCTCTTTACCGAGGCATCGCACTGTGCAGCC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000106462.9 ENSMUST00000106463.8 ENSMUST00000106464.3 ENSMUST00000156206.2 |
||
| CDS-3UTR GCA 90 bp | GGGAGAAGGACTGGCTGCACAGTGCGATGCCTCGGTAAAGAGGGCATGAACGGATGGTCACTCTGCAGGTaGTCCAACTTCTTCCAGCTG | + |
|
Preference number: 4 (lower is better) Translates to: GRRTGCTVRCLGKEGMNGWSLCR*SNFFQL Trigger: CAGCTGGAAGAAGTTGGAGCACCTGCAGAGTGACCA...TCCGTTCATGCCCTCTTTACCGAGGCATCGCACTGTGCAGCCAGTCCTTCTCCC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000030452.13 ENSMUST00000106462.9 ENSMUST00000106463.8 ENSMUST00000106464.3 |
||
| CDS-3UTR GCA 90 bp | AGGACTGGCTGCACAGTGCGATGCCTCGGTAAAGAGGGCATGAACGGAGAGGATAGGAACAGGTCCTCTTaGCCTAGACTCCAGGCATGG | + |
|
Preference number: 4 (lower is better) Translates to: RTGCTVRCLGKEGMNGEDRNRSS*PRLQAW Trigger: CCATGCCTGGAGTCTAGGGCAAGAGGACCTGTTCCT...ATCCTCTCCGTTCATGCCCTCTTTACCGAGGCATCGCACTGTGCAGCCAGTCCT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000106462.9 ENSMUST00000106463.8 ENSMUST00000106464.3 ENSMUST00000156206.2 |
||
| CDS-3UTR GCA 90 bp | ATTAGCCAGGGAGAAGGACTGGCTGCACAGTGCGATGCCTCGGTAAAGAGGGCAAGGAACAGGTCCTCTTaGCCTAGACTCCAGGCATGG | + |
|
Preference number: 4 (lower is better) Translates to: ISQGEGLAAQCDASVKRARNRSS*PRLQAW Trigger: CCATGCCTGGAGTCTAGGGCAAGAGGACCTGTTCCT...TGCCCTCTTTACCGAGGCATCGCACTGTGCAGCCAGTCCTTCTCCCTGGCTAAT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000106462.9 ENSMUST00000106463.8 ENSMUST00000106464.3 ENSMUST00000156206.2 |
||
| CDS-3UTR CCA 90 bp | CCAGGGAGAAGGACTGGCTGCACAGTGCGATGCCTCGGTAAAGAGGGCATGAACTCCTTCTGGGCATCATaGGCCTCTGTACTGGAAACC | + |
|
Preference number: 4 (lower is better) Translates to: PGRRTGCTVRCLGKEGMNSFWAS*ASVLET Trigger: GGTTTCCAGTACAGAGGCCCATGATGCCCAGAAGGA...GTTCATGCCCTCTTTACCGAGGCATCGCACTGTGCAGCCAGTCCTTCTCCCTGG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000030452.13 ENSMUST00000106462.9 ENSMUST00000106463.8 ENSMUST00000106464.3 |
||
| 3UTR CAA 72 bp | CCAGCTGCGGGCCTGAACCTGGGGCCCTTTAGCTATTaGTTCCAGCAACAACTCCTGATGTTGGCTCAGCTG | + |
|
Preference number: 4 (lower is better) Translates to: PAAGLNLGPFSY*FQQQLLMLAQL Trigger: CAGCTGAGCCAACATCAGGAGTTGTTGCTGGAACAAATAGCTAAAGGGCCCCAGGTTCAGGCCCGCAGCTGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000155391.8 |
||
| CDS-3UTR TCA 90 bp | GGAGAGGATGAGGAGGCTGCCTGGGATAGAAGCTGCACCTCATTTTTCTCACAACTCTGCAGCTCTTGGTaGAAGCCACTGGCAGGACCC | + |
|
Preference number: 4 (lower is better) Translates to: GEDEEAAWDRSCTSFFSQLCSSW*KPLAGP Trigger: GGGTCCTGCCAGTGGCTTTCACCAAGAGCTGCAGAG...TTGTGAGAAAAATGAGGTGCAGCTTCTATCCCAGGCAGCCTCCTCATCCTCTCC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 5 transcripts: ENSMUST00000030452.13 ENSMUST00000106462.9 ENSMUST00000106463.8 ENSMUST00000106464.3 ENSMUST00000155391.8 |
||
| CDS-3UTR TCA 90 bp | ACAGTGCGATGCCTCGGTAAAGAGGGCATGAACGGAGAGGATGAGGAGGCTGCCGAAACCTCCAAGGTATaGACCCTGTCCATCTGGTCA | + |
|
Preference number: 4 (lower is better) Translates to: TVRCLGKEGMNGEDEEAAETSKV*TLSIWS Trigger: TGACCAGATGGACAGGGTTCATACCTTGGAGGTTTC...GGCAGCCTCCTCATCCTCTCCGTTCATGCCCTCTTTACCGAGGCATCGCACTGT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000030452.13 ENSMUST00000106462.9 ENSMUST00000106463.8 ENSMUST00000106464.3 |
||
| CDS-3UTR TCA 90 bp | CCAGGGAGAAGGACTGGCTGCACAGTGCGATGCCTCGGTAAAGAGGGCATGAACGAAACCTCCAAGGTATaGACCCTGTCCATCTGGTCA | + |
|
Preference number: 4 (lower is better) Translates to: PGRRTGCTVRCLGKEGMNETSKV*TLSIWS Trigger: TGACCAGATGGACAGGGTTCATACCTTGGAGGTTTC...GTTCATGCCCTCTTTACCGAGGCATCGCACTGTGCAGCCAGTCCTTCTCCCTGG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000030452.13 ENSMUST00000106462.9 ENSMUST00000106463.8 ENSMUST00000106464.3 |
||
| CDS-3UTR GCA 90 bp | AGAAGGACTGGCTGCACAGTGCGATGCCTCGGTAAAGAGGGCATGAACGGAGAGTGGTCACTCTGCAGGTaGTCCAACTTCTTCCAGCTG | + |
|
Preference number: 4 (lower is better) Translates to: RRTGCTVRCLGKEGMNGEWSLCR*SNFFQL Trigger: CAGCTGGAAGAAGTTGGAGCACCTGCAGAGTGACCA...CTCTCCGTTCATGCCCTCTTTACCGAGGCATCGCACTGTGCAGCCAGTCCTTCT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000030452.13 ENSMUST00000106462.9 ENSMUST00000106463.8 ENSMUST00000106464.3 |
||
| CDS-3UTR CCA 90 bp | TACAGGTCACTCTGGAAGATCGTGGGGCCCTCAAGGAACAGGTCCTCTTGCCCTCAGAGAGAGGAGCTGTaGGCTTCAGTACAGCTCAGT | + |
|
Preference number: 4 (lower is better) Translates to: YRSLWKIVGPSRNRSSCPQREEL*ASVQLS Trigger: ACTGAGCTGTACTGAAGCCCACAGCTCCTCTCTCTG...AGGGCAAGAGGACCTGTTCCTTGAGGGCCCCACGATCTTCCAGAGTGACCTGTA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000030452.13 ENSMUST00000155391.8 |
||
| CDS-3UTR CCA 90 bp | CCAGGGAGAAGGACTGGCTGCACAGTGCGATGCCTCGGTAAAGAGGGCATGAACTCTTCCCACAAAACCTaGTGCTCACTCTGCAGCTCT | + |
|
Preference number: 4 (lower is better) Translates to: PGRRTGCTVRCLGKEGMNSSHKT*CSLCSS Trigger: AGAGCTGCAGAGTGAGCACCAGGTTTTGTGGGAAGA...GTTCATGCCCTCTTTACCGAGGCATCGCACTGTGCAGCCAGTCCTTCTCCCTGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000030452.13 ENSMUST00000106462.9 ENSMUST00000106463.8 ENSMUST00000106464.3 |
||
| CDS-3UTR TCA 90 bp | TTTCTCACAAGTTCTTACAGGTCACTCTGGAAGATCGTGGGGCCCTCAAGGAACCTCTGCAGCTCTTGGTaGAAGCCACTGGCAGGACCC | + |
|
Preference number: 4 (lower is better) Translates to: FLTSSYRSLWKIVGPSRNLCSSW*KPLAGP Trigger: GGGTCCTGCCAGTGGCTTTCACCAAGAGCTGCAGAG...GTTCCTTGAGGGCCCCACGATCTTCCAGAGTGACCTGTAAGAACTTGTGAGAAA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000030452.13 ENSMUST00000155391.8 |
||
| CDS-3UTR TCA 90 bp | ATTAGCCAGGGAGAAGGACTGGCTGCACAGTGCGATGCCTCGGTAAAGAGGGCAGAAACCTCCAAGGTATaGACCCTGTCCATCTGGTCA | + |
|
Preference number: 4 (lower is better) Translates to: ISQGEGLAAQCDASVKRAETSKV*TLSIWS Trigger: TGACCAGATGGACAGGGTTCATACCTTGGAGGTTTC...TGCCCTCTTTACCGAGGCATCGCACTGTGCAGCCAGTCCTTCTCCCTGGCTAAT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000030452.13 ENSMUST00000106462.9 ENSMUST00000106463.8 ENSMUST00000106464.3 |
||
| CDS-3UTR TCA 90 bp | GGCATGAACGGAGAGGATGAGGAGGCTGCCTGGGATAGAAGCTGCACCTCATTTCACAGTCTGGGAGACTaGCTTCAGAGCTGGATGAAG | + |
|
Preference number: 4 (lower is better) Translates to: GMNGEDEEAAWDRSCTSFHSLGD*LQSWMK Trigger: CTTCATCCAGCTCTGAAGTCAGTCTCCCAGACTGTG...AAATGAGGTGCAGCTTCTATCCCAGGCAGCCTCCTCATCCTCTCCGTTCATGCC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000156206.2 |
||
| CDS-3UTR GCA 90 bp | AGGACTGGCTGCACAGTGCGATGCCTCGGTAAAGAGGGCATGAACGGAGAGGATTCCATCTGGTCACTCTaGAGGTGCTCCAACTTCTTC | + |
|
Preference number: 4 (lower is better) Translates to: RTGCTVRCLGKEGMNGEDSIWSL*RCSNFF Trigger: GAAGAAGTTGGAGCACCTGCAGAGTGACCAGATGGA...ATCCTCTCCGTTCATGCCCTCTTTACCGAGGCATCGCACTGTGCAGCCAGTCCT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000030452.13 ENSMUST00000106462.9 ENSMUST00000106463.8 ENSMUST00000106464.3 |
||
| CDS-3UTR GCA 90 bp | TGCACAGTGCGATGCCTCGGTAAAGAGGGCATGAACGGAGAGGATGAGGAGGCTTCCATCTGGTCACTCTaGAGGTGCTCCAACTTCTTC | + |
|
Preference number: 4 (lower is better) Translates to: CTVRCLGKEGMNGEDEEASIWSL*RCSNFF Trigger: GAAGAAGTTGGAGCACCTGCAGAGTGACCAGATGGA...AGCCTCCTCATCCTCTCCGTTCATGCCCTCTTTACCGAGGCATCGCACTGTGCA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000030452.13 ENSMUST00000106462.9 ENSMUST00000106463.8 ENSMUST00000106464.3 |
||
| CDS-3UTR CCA 90 bp | GGCATGAACGGAGAGGATGAGGAGGCTGCCTGGGATAGAAGCTGCACCTCATTTCAGAGAGAGGAGCTGTaGGCTTCAGTACAGCTCAGT | + |
|
Preference number: 4 (lower is better) Translates to: GMNGEDEEAAWDRSCTSFQREEL*ASVQLS Trigger: ACTGAGCTGTACTGAAGCCCACAGCTCCTCTCTCTG...AAATGAGGTGCAGCTTCTATCCCAGGCAGCCTCCTCATCCTCTCCGTTCATGCC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000030452.13 ENSMUST00000106463.8 ENSMUST00000106464.3 ENSMUST00000155391.8 |
||
| CDS-3UTR CCA 90 bp | ATTAGCCAGGGAGAAGGACTGGCTGCACAGTGCGATGCCTCGGTAAAGAGGGCATCTTCCCACAAAACCTaGTGCTCACTCTGCAGCTCT | + |
|
Preference number: 4 (lower is better) Translates to: ISQGEGLAAQCDASVKRASSHKT*CSLCSS Trigger: AGAGCTGCAGAGTGAGCACCAGGTTTTGTGGGAAGA...TGCCCTCTTTACCGAGGCATCGCACTGTGCAGCCAGTCCTTCTCCCTGGCTAAT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000030452.13 ENSMUST00000106462.9 ENSMUST00000106463.8 ENSMUST00000106464.3 |
||
| CDS-3UTR CCA 90 bp | CCAGGGAGAAGGACTGGCTGCACAGTGCGATGCCTCGGTAAAGAGGGCATGAACCATGGGCCTCTGTACTaGAAACCTCCAAGGTATGAA | + |
|
Preference number: 4 (lower is better) Translates to: PGRRTGCTVRCLGKEGMNHGPLY*KPPRYE Trigger: TTCATACCTTGGAGGTTTCCAGTACAGAGGCCCATG...GTTCATGCCCTCTTTACCGAGGCATCGCACTGTGCAGCCAGTCCTTCTCCCTGG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000030452.13 ENSMUST00000106462.9 ENSMUST00000106463.8 ENSMUST00000106464.3 |
||
| CDS-3UTR TCA 90 bp | CTACTTTATTTTGAATTAGCCAGGGAGAAGGACTGGCTGCACAGTGCGATGCCTCTCTGCAGCTCTTGGTaGAAGCCACTGGCAGGACCC | + |
|
Preference number: 4 (lower is better) Translates to: LLYFELAREKDWLHSAMPLCSSW*KPLAGP Trigger: GGGTCCTGCCAGTGGCTTTCACCAAGAGCTGCAGAG...AGGCATCGCACTGTGCAGCCAGTCCTTCTCCCTGGCTAATTCAAAATAAAGTAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000030452.13 ENSMUST00000106462.9 ENSMUST00000106463.8 ENSMUST00000106464.3 ENSMUST00000155391.8 |
||
| CDS-3UTR GCA 90 bp | ACGGAGAGGATGAGGAGGCTGCCTGGGATAGAAGCTGCACCTCATTTTTCTCACTGGTCACTCTGCAGGTaGTCCAACTTCTTCCAGCTG | + |
|
Preference number: 4 (lower is better) Translates to: TERMRRLPGIEAAPHFSHWSLCR*SNFFQL Trigger: CAGCTGGAAGAAGTTGGAGCACCTGCAGAGTGACCA...GTGAGAAAAATGAGGTGCAGCTTCTATCCCAGGCAGCCTCCTCATCCTCTCCGT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000030452.13 ENSMUST00000106462.9 ENSMUST00000106463.8 ENSMUST00000106464.3 |
||
| CDS-3UTR CCA 90 bp | ATTAGCCAGGGAGAAGGACTGGCTGCACAGTGCGATGCCTCGGTAAAGAGGGCACATGGGCCTCTGTACTaGAAACCTCCAAGGTATGAA | + |
|
Preference number: 4 (lower is better) Translates to: ISQGEGLAAQCDASVKRAHGPLY*KPPRYE Trigger: TTCATACCTTGGAGGTTTCCAGTACAGAGGCCCATG...TGCCCTCTTTACCGAGGCATCGCACTGTGCAGCCAGTCCTTCTCCCTGGCTAAT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000030452.13 ENSMUST00000106462.9 ENSMUST00000106463.8 ENSMUST00000106464.3 |
||
| CDS-3UTR TCA 90 bp | ATGAAGCTACTTTATTTTGAATTAGCCAGGGAGAAGGACTGGCTGCACAGTGCGTGCCAGAGGCAGCTTTaGCTGCTGGGCAGGAACGGA | + |
|
Preference number: 4 (lower is better) Translates to: MKLLYFELAREKDWLHSACQRQL*LLGRNG Trigger: TCCGTTCCTGCCCAGCAGTCAAAGCTGCCTCTGGCA...CGCACTGTGCAGCCAGTCCTTCTCCCTGGCTAATTCAAAATAAAGTAGCTTCAT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000156206.2 |
||
| CDS-3UTR CCA 90 bp | GAGAGGATGAGGAGGCTGCCTGGGATAGAAGCTGCACCTCATTTTTCTCACAAGCAGAGAGAGGAGCTGTaGGCTTCAGTACAGCTCAGT | + |
|
Preference number: 4 (lower is better) Translates to: ERMRRLPGIEAAPHFSHKQREEL*ASVQLS Trigger: ACTGAGCTGTACTGAAGCCCACAGCTCCTCTCTCTG...CTTGTGAGAAAAATGAGGTGCAGCTTCTATCCCAGGCAGCCTCCTCATCCTCTC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000030452.13 ENSMUST00000106463.8 ENSMUST00000106464.3 ENSMUST00000155391.8 |
||
| CDS-3UTR CCA 90 bp | GAGGGCATGAACGGAGAGGATGAGGAGGCTGCCTGGGATAGAAGCTGCACCTCAAGGACCCAACTTTCCTaGTCTTGCTTTCATTTGGTT | + |
|
Preference number: 4 (lower is better) Translates to: EGMNGEDEEAAWDRSCTSRTQLS*SCFHLV Trigger: AACCAAATGAAAGCAAGACCAGGAAAGTTGGGTCCT...TGAGGTGCAGCTTCTATCCCAGGCAGCCTCCTCATCCTCTCCGTTCATGCCCTC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000030452.13 ENSMUST00000106462.9 ENSMUST00000106463.8 ENSMUST00000106464.3 ENSMUST00000155391.8 |
||
| CDS-3UTR TCA 90 bp | AGGATGAGGAGGCTGCCTGGGATAGAAGCTGCACCTCATTTTTCTCACAAGTTCGTTGTTCTGGAGTTCTaGGGAGGTAGGGCTCTTCCT | + |
|
Preference number: 4 (lower is better) Translates to: RMRRLPGIEAAPHFSHKFVVLEF*GGRALP Trigger: AGGAAGAGCCCTACCTCCTCAGAACTCCAGAACAAC...GAACTTGTGAGAAAAATGAGGTGCAGCTTCTATCCCAGGCAGCCTCCTCATCCT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000030452.13 |
||
| CDS-3UTR GCA 90 bp | GGAGAGGATGAGGAGGCTGCCTGGGATAGAAGCTGCACCTCATTTTTCTCACAATCCATCTGGTCACTCTaGAGGTGCTCCAACTTCTTC | + |
|
Preference number: 4 (lower is better) Translates to: GEDEEAAWDRSCTSFFSQSIWSL*RCSNFF Trigger: GAAGAAGTTGGAGCACCTGCAGAGTGACCAGATGGA...TTGTGAGAAAAATGAGGTGCAGCTTCTATCCCAGGCAGCCTCCTCATCCTCTCC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000030452.13 ENSMUST00000106462.9 ENSMUST00000106463.8 ENSMUST00000106464.3 |
||
| CDS-3UTR GCA 90 bp | AACGGAGAGGATGAGGAGGCTGCCTGGGATAGAAGCTGCACCTCATTTTTCTCATCCATCTGGTCACTCTaGAGGTGCTCCAACTTCTTC | + |
|
Preference number: 4 (lower is better) Translates to: NGEDEEAAWDRSCTSFFSSIWSL*RCSNFF Trigger: GAAGAAGTTGGAGCACCTGCAGAGTGACCAGATGGA...TGAGAAAAATGAGGTGCAGCTTCTATCCCAGGCAGCCTCCTCATCCTCTCCGTT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000030452.13 ENSMUST00000106462.9 ENSMUST00000106463.8 ENSMUST00000106464.3 |
||
| CDS-3UTR CCA 90 bp | AACGGAGAGGATGAGGAGGCTGCCTGGGATAGAAGCTGCACCTCATTTTTCTCATCTTCCCACAAAACCTaGTGCTCACTCTGCAGCTCT | + |
|
Preference number: 4 (lower is better) Translates to: NGEDEEAAWDRSCTSFFSSSHKT*CSLCSS Trigger: AGAGCTGCAGAGTGAGCACCAGGTTTTGTGGGAAGA...TGAGAAAAATGAGGTGCAGCTTCTATCCCAGGCAGCCTCCTCATCCTCTCCGTT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000030452.13 ENSMUST00000106462.9 ENSMUST00000106463.8 ENSMUST00000106464.3 |
||
| CDS-3UTR TCA 90 bp | GATAGAAGCTGCACCTCATTTTTCTCACAAGTTCTTACAGGTCACTCTGGAAGACTCTGCAGCTCTTGGTaGAAGCCACTGGCAGGACCC | + |
|
Preference number: 4 (lower is better) Translates to: DRSCTSFFSQVLTGHSGRLCSSW*KPLAGP Trigger: GGGTCCTGCCAGTGGCTTTCACCAAGAGCTGCAGAG...TCTTCCAGAGTGACCTGTAAGAACTTGTGAGAAAAATGAGGTGCAGCTTCTATC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000030452.13 ENSMUST00000155391.8 |
||
| CDS-3UTR TCA 90 bp | ACGGAGAGGATGAGGAGGCTGCCTGGGATAGAAGCTGCACCTCATTTTTCTCACGACTTCAGAGCTGGATaGAGAAAGAGACATGGTGAA | + |
|
Preference number: 4 (lower is better) Translates to: TERMRRLPGIEAAPHFSHDFRAG*RKRHGE Trigger: TTCACCATGTCTCTTTCTTCATCCAGCTCTGAAGTC...GTGAGAAAAATGAGGTGCAGCTTCTATCCCAGGCAGCCTCCTCATCCTCTCCGT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000156206.2 |
||
| CDS-3UTR GCA 90 bp | ATTTTTCTCACAAGTTCTTACAGGTCACTCTGGAAGATCGTGGGGCCCTCAAGGTCCCACAAAACCTGGTaGTCACTCTGCAGCTCTTGG | + |
|
Preference number: 4 (lower is better) Translates to: IFLTSSYRSLWKIVGPSRSHKTW*SLCSSW Trigger: CCAAGAGCTGCAGAGTGAGCACCAGGTTTTGTGGGA...CCTTGAGGGCCCCACGATCTTCCAGAGTGACCTGTAAGAACTTGTGAGAAAAAT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000030452.13 |
||
| CDS-3UTR CCA 90 bp | ATTTTTCTCACAAGTTCTTACAGGTCACTCTGGAAGATCGTGGGGCCCTCAAGGCAGAGAGAGGAGCTGTaGGCTTCAGTACAGCTCAGT | + |
|
Preference number: 4 (lower is better) Translates to: IFLTSSYRSLWKIVGPSRQREEL*ASVQLS Trigger: ACTGAGCTGTACTGAAGCCCACAGCTCCTCTCTCTG...CCTTGAGGGCCCCACGATCTTCCAGAGTGACCTGTAAGAACTTGTGAGAAAAAT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000030452.13 ENSMUST00000155391.8 |
||
| CDS-3UTR CCA 90 bp | AGGATGAGGAGGCTGCCTGGGATAGAAGCTGCACCTCATTTTTCTCACAAGTTCTCTTCCCACAAAACCTaGTGCTCACTCTGCAGCTCT | + |
|
Preference number: 4 (lower is better) Translates to: RMRRLPGIEAAPHFSHKFSSHKT*CSLCSS Trigger: AGAGCTGCAGAGTGAGCACCAGGTTTTGTGGGAAGA...GAACTTGTGAGAAAAATGAGGTGCAGCTTCTATCCCAGGCAGCCTCCTCATCCT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000030452.13 ENSMUST00000106462.9 ENSMUST00000106463.8 ENSMUST00000106464.3 |
||
| CDS-3UTR CCA 90 bp | AACGGAGAGGATGAGGAGGCTGCCTGGGATAGAAGCTGCACCTCATTTTTCTCACATGGGCCTCTGTACTaGAAACCTCCAAGGTATGAA | + |
|
Preference number: 4 (lower is better) Translates to: NGEDEEAAWDRSCTSFFSHGPLY*KPPRYE Trigger: TTCATACCTTGGAGGTTTCCAGTACAGAGGCCCATG...TGAGAAAAATGAGGTGCAGCTTCTATCCCAGGCAGCCTCCTCATCCTCTCCGTT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000030452.13 ENSMUST00000106462.9 ENSMUST00000106463.8 ENSMUST00000106464.3 |
||
| CDS-3UTR CCA 90 bp | CTCATTTTTCTCACAAGTTCTTACAGGTCACTCTGGAAGATCGTGGGGCCCTCATCCTTCTGGGCATCATaGGCCTCTGTACTGGAAACC | + |
|
Preference number: 4 (lower is better) Translates to: LIFLTSSYRSLWKIVGPSSFWAS*ASVLET Trigger: GGTTTCCAGTACAGAGGCCCATGATGCCCAGAAGGA...TGAGGGCCCCACGATCTTCCAGAGTGACCTGTAAGAACTTGTGAGAAAAATGAG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000030452.13 |
||
| CDS-3UTR CCA 90 bp | CTACTTTATTTTGAATTAGCCAGGGAGAAGGACTGGCTGCACAGTGCGATGCCTTCCTTCTGGGCATCATaGGCCTCTGTACTGGAAACC | + |
|
Preference number: 4 (lower is better) Translates to: LLYFELAREKDWLHSAMPSFWAS*ASVLET Trigger: GGTTTCCAGTACAGAGGCCCATGATGCCCAGAAGGA...AGGCATCGCACTGTGCAGCCAGTCCTTCTCCCTGGCTAATTCAAAATAAAGTAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000030452.13 ENSMUST00000106462.9 ENSMUST00000106463.8 ENSMUST00000106464.3 |
||
| CDS-3UTR TCA 90 bp | CTCATTTTTCTCACAAGTTCTTACAGGTCACTCTGGAAGATCGTGGGGCCCTCAGAAACCTCCAAGGTATaGACCCTGTCCATCTGGTCA | + |
|
Preference number: 4 (lower is better) Translates to: LIFLTSSYRSLWKIVGPSETSKV*TLSIWS Trigger: TGACCAGATGGACAGGGTTCATACCTTGGAGGTTTC...TGAGGGCCCCACGATCTTCCAGAGTGACCTGTAAGAACTTGTGAGAAAAATGAG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000030452.13 |
||
| CDS-3UTR GCA 90 bp | ATGAAGCTACTTTATTTTGAATTAGCCAGGGAGAAGGACTGGCTGCACAGTGCGTCCCACAAAACCTGGTaGTCACTCTGCAGCTCTTGG | + |
|
Preference number: 4 (lower is better) Translates to: MKLLYFELAREKDWLHSASHKTW*SLCSSW Trigger: CCAAGAGCTGCAGAGTGAGCACCAGGTTTTGTGGGA...CGCACTGTGCAGCCAGTCCTTCTCCCTGGCTAATTCAAAATAAAGTAGCTTCAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000030452.13 ENSMUST00000106462.9 ENSMUST00000106463.8 ENSMUST00000106464.3 |
||
| CDS-3UTR GCA 90 bp | GGGAGAATGAAGCTACTTTATTTTGAATTAGCCAGGGAGAAGGACTGGCTGCACTCCCACAAAACCTGGTaGTCACTCTGCAGCTCTTGG | + |
|
Preference number: 4 (lower is better) Translates to: GRMKLLYFELAREKDWLHSHKTW*SLCSSW Trigger: CCAAGAGCTGCAGAGTGAGCACCAGGTTTTGTGGGA...GTGCAGCCAGTCCTTCTCCCTGGCTAATTCAAAATAAAGTAGCTTCATTCTCCC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000106462.9 ENSMUST00000106463.8 ENSMUST00000106464.3 |
||
| CDS-3UTR GCA 90 bp | AAGCTACTTTATTTTGAATTAGCCAGGGAGAAGGACTGGCTGCACAGTGCGATGTCCCACAAAACCTGGTaGTCACTCTGCAGCTCTTGG | + |
|
Preference number: 4 (lower is better) Translates to: KLLYFELAREKDWLHSAMSHKTW*SLCSSW Trigger: CCAAGAGCTGCAGAGTGAGCACCAGGTTTTGTGGGA...CATCGCACTGTGCAGCCAGTCCTTCTCCCTGGCTAATTCAAAATAAAGTAGCTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000030452.13 ENSMUST00000106462.9 ENSMUST00000106463.8 ENSMUST00000106464.3 |
||
| CDS-3UTR GCA 90 bp | ATGAGGAGGCTGCCTGGGATAGAAGCTGCACCTCATTTTTCTCACAAGTTCTTATGGTCACTCTGCAGGTaGTCCAACTTCTTCCAGCTG | + |
|
Preference number: 4 (lower is better) Translates to: MRRLPGIEAAPHFSHKFLWSLCR*SNFFQL Trigger: CAGCTGGAAGAAGTTGGAGCACCTGCAGAGTGACCA...TAAGAACTTGTGAGAAAAATGAGGTGCAGCTTCTATCCCAGGCAGCCTCCTCAT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000030452.13 |
||
| CDS-3UTR CCA 90 bp | CTCACAAGTTCTTACAGGTCACTCTGGAAGATCGTGGGGCCCTCAAGGAACAGGAGGACCCAACTTTCCTaGTCTTGCTTTCATTTGGTT | + |
|
Preference number: 4 (lower is better) Translates to: LTSSYRSLWKIVGPSRNRRTQLS*SCFHLV Trigger: AACCAAATGAAAGCAAGACCAGGAAAGTTGGGTCCT...CCTGTTCCTTGAGGGCCCCACGATCTTCCAGAGTGACCTGTAAGAACTTGTGAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000030452.13 ENSMUST00000155391.8 |
||
| CDS-3UTR CCA 90 bp | AACGGAGAGGATGAGGAGGCTGCCTGGGATAGAAGCTGCACCTCATTTTTCTCAAGGACCCAACTTTCCTaGTCTTGCTTTCATTTGGTT | + |
|
Preference number: 4 (lower is better) Translates to: NGEDEEAAWDRSCTSFFSRTQLS*SCFHLV Trigger: AACCAAATGAAAGCAAGACCAGGAAAGTTGGGTCCT...TGAGAAAAATGAGGTGCAGCTTCTATCCCAGGCAGCCTCCTCATCCTCTCCGTT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 5 transcripts: ENSMUST00000030452.13 ENSMUST00000106462.9 ENSMUST00000106463.8 ENSMUST00000106464.3 ENSMUST00000155391.8 |
||
| CDS-3UTR CCA 90 bp | GAGGATGAGGAGGCTGCCTGGGATAGAAGCTGCACCTCATTTTTCTCACAAGTTGGAAGGGAGTTGTTCTaGAGTTCCCTATCCAATTTC | + |
|
Preference number: 4 (lower is better) Translates to: EDEEAAWDRSCTSFFSQVGRELF*SSLSNF Trigger: GAAATTGGATAGGGAACTCCAGAACAACTCCCTTCC...AACTTGTGAGAAAAATGAGGTGCAGCTTCTATCCCAGGCAGCCTCCTCATCCTC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000106462.9 ENSMUST00000106463.8 ENSMUST00000106464.3 ENSMUST00000156206.2 |
||
| CDS-3UTR CCA 90 bp | AGGATGAGGAGGCTGCCTGGGATAGAAGCTGCACCTCATTTTTCTCACAAGTTCGGAAGGGAGTTGTTCTaGAGTTCCCTATCCAATTTC | + |
|
Preference number: 4 (lower is better) Translates to: RMRRLPGIEAAPHFSHKFGRELF*SSLSNF Trigger: GAAATTGGATAGGGAACTCCAGAACAACTCCCTTCC...GAACTTGTGAGAAAAATGAGGTGCAGCTTCTATCCCAGGCAGCCTCCTCATCCT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000106462.9 ENSMUST00000106463.8 ENSMUST00000106464.3 ENSMUST00000156206.2 |
||
| CDS-3UTR TCA 90 bp | GAGAGGATGAGGAGGCTGCCTGGGATAGAAGCTGCACCTCATTTTTCTCACAAGCATATTTTCATCAGTTaGACTGAGAACCGCATGAAG | + |
|
Preference number: 4 (lower is better) Translates to: ERMRRLPGIEAAPHFSHKHIFIS*TENRMK Trigger: CTTCATGCGGTTCTCAGTTCAACTGATGAAAATATG...CTTGTGAGAAAAATGAGGTGCAGCTTCTATCCCAGGCAGCCTCCTCATCCTCTC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000106463.8 ENSMUST00000106464.3 ENSMUST00000155391.8 |
||
| CDS-3UTR CCA 90 bp | AGGATGAGGAGGCTGCCTGGGATAGAAGCTGCACCTCATTTTTCTCACAAGTTCAGGACCCAACTTTCCTaGTCTTGCTTTCATTTGGTT | + |
|
Preference number: 4 (lower is better) Translates to: RMRRLPGIEAAPHFSHKFRTQLS*SCFHLV Trigger: AACCAAATGAAAGCAAGACCAGGAAAGTTGGGTCCT...GAACTTGTGAGAAAAATGAGGTGCAGCTTCTATCCCAGGCAGCCTCCTCATCCT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 5 transcripts: ENSMUST00000030452.13 ENSMUST00000106462.9 ENSMUST00000106463.8 ENSMUST00000106464.3 ENSMUST00000155391.8 |
||
| CDS-3UTR CCA 90 bp | AAGCTACTTTATTTTGAATTAGCCAGGGAGAAGGACTGGCTGCACAGTGCGATGCATGGGCCTCTGTACTaGAAACCTCCAAGGTATGAA | + |
|
Preference number: 4 (lower is better) Translates to: KLLYFELAREKDWLHSAMHGPLY*KPPRYE Trigger: TTCATACCTTGGAGGTTTCCAGTACAGAGGCCCATG...CATCGCACTGTGCAGCCAGTCCTTCTCCCTGGCTAATTCAAAATAAAGTAGCTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000030452.13 ENSMUST00000106462.9 ENSMUST00000106463.8 ENSMUST00000106464.3 |
||
| CDS-3UTR CCA 90 bp | CTACTTTATTTTGAATTAGCCAGGGAGAAGGACTGGCTGCACAGTGCGATGCCTGGAAGGGAGTTGTTCTaGAGTTCCCTATCCAATTTC | + |
|
Preference number: 4 (lower is better) Translates to: LLYFELAREKDWLHSAMPGRELF*SSLSNF Trigger: GAAATTGGATAGGGAACTCCAGAACAACTCCCTTCC...AGGCATCGCACTGTGCAGCCAGTCCTTCTCCCTGGCTAATTCAAAATAAAGTAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000106462.9 ENSMUST00000106463.8 ENSMUST00000106464.3 ENSMUST00000156206.2 |
||
| CDS-3UTR CCA 90 bp | CTACTTTATTTTGAATTAGCCAGGGAGAAGGACTGGCTGCACAGTGCGATGCCTAGGACCCAACTTTCCTaGTCTTGCTTTCATTTGGTT | + |
|
Preference number: 4 (lower is better) Translates to: LLYFELAREKDWLHSAMPRTQLS*SCFHLV Trigger: AACCAAATGAAAGCAAGACCAGGAAAGTTGGGTCCT...AGGCATCGCACTGTGCAGCCAGTCCTTCTCCCTGGCTAATTCAAAATAAAGTAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000030452.13 ENSMUST00000106462.9 ENSMUST00000106463.8 ENSMUST00000106464.3 ENSMUST00000155391.8 |
||
| CDS-3UTR TCA 90 bp | CTACTTTATTTTGAATTAGCCAGGGAGAAGGACTGGCTGCACAGTGCGATGCCTCATATTTTCATCAGTTaGACTGAGAACCGCATGAAG | + |
|
Preference number: 4 (lower is better) Translates to: LLYFELAREKDWLHSAMPHIFIS*TENRMK Trigger: CTTCATGCGGTTCTCAGTTCAACTGATGAAAATATG...AGGCATCGCACTGTGCAGCCAGTCCTTCTCCCTGGCTAATTCAAAATAAAGTAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000106463.8 ENSMUST00000106464.3 ENSMUST00000155391.8 |
||
| CDS-3UTR CCA 90 bp | TCAGGGAGAATGAAGCTACTTTATTTTGAATTAGCCAGGGAGAAGGACTGGCTGGGAAGGGAGTTGTTCTaGAGTTCCCTATCCAATTTC | + |
|
Preference number: 4 (lower is better) Translates to: SGRMKLLYFELAREKDWLGRELF*SSLSNF Trigger: GAAATTGGATAGGGAACTCCAGAACAACTCCCTTCC...CAGCCAGTCCTTCTCCCTGGCTAATTCAAAATAAAGTAGCTTCATTCTCCCTGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000106463.8 |
||
| CDS-3UTR TCA 90 bp | AAGCTACTTTATTTTGAATTAGCCAGGGAGAAGGACTGGCTGCACAGTGCGATGCATATTTTCATCAGTTaGACTGAGAACCGCATGAAG | + |
|
Preference number: 4 (lower is better) Translates to: KLLYFELAREKDWLHSAMHIFIS*TENRMK Trigger: CTTCATGCGGTTCTCAGTTCAACTGATGAAAATATG...CATCGCACTGTGCAGCCAGTCCTTCTCCCTGGCTAATTCAAAATAAAGTAGCTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000106463.8 ENSMUST00000106464.3 ENSMUST00000155391.8 |
||
| CDS-3UTR CAA 90 bp | CCAGGGAGAAGGACTGGCTGCACAGTGCGATGCCTCGGTAAAGAGGGCATGAACCAGCCCTTCCAGGCATaGCTCCAGAAGGGCTCTCCC | + |
|
Preference number: 5 (lower is better) Translates to: PGRRTGCTVRCLGKEGMNQPFQA*LQKGSP Trigger: GGGAGAGCCCTTCTGGAGCAATGCCTGGAAGGGCTG...GTTCATGCCCTCTTTACCGAGGCATCGCACTGTGCAGCCAGTCCTTCTCCCTGG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000030452.13 ENSMUST00000106462.9 ENSMUST00000106463.8 ENSMUST00000106464.3 ENSMUST00000155391.8 |
||
| CDS-3UTR CAA 90 bp | ATTAGCCAGGGAGAAGGACTGGCTGCACAGTGCGATGCCTCGGTAAAGAGGGCACCAAGGCTGTTGAGCTaGGGCCTCTGGCTGAGGAGG | + |
|
Preference number: 5 (lower is better) Translates to: ISQGEGLAAQCDASVKRAPRLLS*GLWLRR Trigger: CCTCCTCAGCCAGAGGCCCAAGCTCAACAGCCTTGG...TGCCCTCTTTACCGAGGCATCGCACTGTGCAGCCAGTCCTTCTCCCTGGCTAAT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000106463.8 ENSMUST00000106464.3 ENSMUST00000155391.8 |
||
| CDS-3UTR CAA 90 bp | GGGAGAAGGACTGGCTGCACAGTGCGATGCCTCGGTAAAGAGGGCATGAACGGACTCACTCTGCAGCTCTaGGTGAAAGCCACTGGCAGG | + |
|
Preference number: 5 (lower is better) Translates to: GRRTGCTVRCLGKEGMNGLTLQL*VKATGR Trigger: CCTGCCAGTGGCTTTCACCAAGAGCTGCAGAGTGAG...TCCGTTCATGCCCTCTTTACCGAGGCATCGCACTGTGCAGCCAGTCCTTCTCCC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000030452.13 ENSMUST00000106462.9 ENSMUST00000106463.8 ENSMUST00000106464.3 |
||
| CDS-3UTR CAA 90 bp | GGCTGCACAGTGCGATGCCTCGGTAAAGAGGGCATGAACGGAGAGGATGAGGAGCTCACTCTGCAGCTCTaGGTGAAAGCCACTGGCAGG | + |
|
Preference number: 5 (lower is better) Translates to: GCTVRCLGKEGMNGEDEELTLQL*VKATGR Trigger: CCTGCCAGTGGCTTTCACCAAGAGCTGCAGAGTGAG...CTCCTCATCCTCTCCGTTCATGCCCTCTTTACCGAGGCATCGCACTGTGCAGCC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000030452.13 ENSMUST00000106462.9 ENSMUST00000106463.8 ENSMUST00000106464.3 |
||
| CDS-3UTR CAA 90 bp | CACAAGTTCTTACAGGTCACTCTGGAAGATCGTGGGGCCCTCAAGGAACAGGTCCAGCCCTTCCAGGCATaGCTCCAGAAGGGCTCTCCC | + |
|
Preference number: 5 (lower is better) Translates to: HKFLQVTLEDRGALKEQVQPFQA*LQKGSP Trigger: GGGAGAGCCCTTCTGGAGCAATGCCTGGAAGGGCTG...GACCTGTTCCTTGAGGGCCCCACGATCTTCCAGAGTGACCTGTAAGAACTTGTG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000030452.13 ENSMUST00000155391.8 |
||
| CDS-3UTR CAA 90 bp | ACGGAGAGGATGAGGAGGCTGCCTGGGATAGAAGCTGCACCTCATTTTTCTCACCAGCCCTTCCAGGCATaGCTCCAGAAGGGCTCTCCC | + |
|
Preference number: 5 (lower is better) Translates to: TERMRRLPGIEAAPHFSHQPFQA*LQKGSP Trigger: GGGAGAGCCCTTCTGGAGCAATGCCTGGAAGGGCTG...GTGAGAAAAATGAGGTGCAGCTTCTATCCCAGGCAGCCTCCTCATCCTCTCCGT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 5 transcripts: ENSMUST00000030452.13 ENSMUST00000106462.9 ENSMUST00000106463.8 ENSMUST00000106464.3 ENSMUST00000155391.8 |
||
| CDS-3UTR CAA 90 bp | TGCACAGTGCGATGCCTCGGTAAAGAGGGCATGAACGGAGAGGATGAGGAGGCTCTCACTCTGCAGCTCTaGGTGAAAGCCACTGGCAGG | + |
|
Preference number: 5 (lower is better) Translates to: CTVRCLGKEGMNGEDEEALTLQL*VKATGR Trigger: CCTGCCAGTGGCTTTCACCAAGAGCTGCAGAGTGAG...AGCCTCCTCATCCTCTCCGTTCATGCCCTCTTTACCGAGGCATCGCACTGTGCA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000030452.13 ENSMUST00000106462.9 ENSMUST00000106463.8 ENSMUST00000106464.3 |
||
| CDS-3UTR CAA 90 bp | ACGGAGAGGATGAGGAGGCTGCCTGGGATAGAAGCTGCACCTCATTTTTCTCACCCAAGGCTGTTGAGCTaGGGCCTCTGGCTGAGGAGG | + |
|
Preference number: 5 (lower is better) Translates to: TERMRRLPGIEAAPHFSHPRLLS*GLWLRR Trigger: CCTCCTCAGCCAGAGGCCCAAGCTCAACAGCCTTGG...GTGAGAAAAATGAGGTGCAGCTTCTATCCCAGGCAGCCTCCTCATCCTCTCCGT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000106463.8 ENSMUST00000106464.3 ENSMUST00000155391.8 |
||
| CDS CCA 90 bp | GAGAGGAGCTGTGGGCTTCAGTACAGCTCAGTCTCTCTCCAAGAGTaGGAGTCTTTAGAGCCCAAGGCTGTTGAGCTTGGGCCTCTGGCT | + |
|
Preference number: 5 (lower is better) Translates to: ERSCGLQYSSVSLQE*ESLEPKAVELGPLA Trigger: AGCCAGAGGCCCAAGCTCAACAGCCTTGGGCTCTAAAGACTCCCACTCTTGGAGAGAGACTGAGCTGTACTGAAGCCCACAGCTCCTCTC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000030452.13 ENSMUST00000106463.8 ENSMUST00000106464.3 ENSMUST00000125671.8 ENSMUST00000130828.8 ENSMUST00000155391.8 |
||
| CDS-3UTR CAA 90 bp | GAGAGGATGAGGAGGCTGCCTGGGATAGAAGCTGCACCTCATTTTTCTCACAAGCAGCCCTTCCAGGCATaGCTCCAGAAGGGCTCTCCC | + |
|
Preference number: 5 (lower is better) Translates to: ERMRRLPGIEAAPHFSHKQPFQA*LQKGSP Trigger: GGGAGAGCCCTTCTGGAGCAATGCCTGGAAGGGCTG...CTTGTGAGAAAAATGAGGTGCAGCTTCTATCCCAGGCAGCCTCCTCATCCTCTC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 5 transcripts: ENSMUST00000030452.13 ENSMUST00000106462.9 ENSMUST00000106463.8 ENSMUST00000106464.3 ENSMUST00000155391.8 |
||
| CDS-3UTR CAA 90 bp | GGGAGAAGGACTGGCTGCACAGTGCGATGCCTCGGTAAAGAGGGCATGAACGGACAACAACTCCTGATGTaGGCTCAGCTGGTCTCGAAG | + |
|
Preference number: 5 (lower is better) Translates to: GRRTGCTVRCLGKEGMNGQQLLM*AQLVSK Trigger: CTTCGAGACCAGCTGAGCCAACATCAGGAGTTGTTG...TCCGTTCATGCCCTCTTTACCGAGGCATCGCACTGTGCAGCCAGTCCTTCTCCC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000030452.13 ENSMUST00000106462.9 ENSMUST00000106463.8 ENSMUST00000106464.3 |
||
| CDS-3UTR CAA 90 bp | AACGGAGAGGATGAGGAGGCTGCCTGGGATAGAAGCTGCACCTCATTTTTCTCACCAAGGCTGTTGAGCTaGGGCCTCTGGCTGAGGAGG | + |
|
Preference number: 5 (lower is better) Translates to: NGEDEEAAWDRSCTSFFSPRLLS*GLWLRR Trigger: CCTCCTCAGCCAGAGGCCCAAGCTCAACAGCCTTGG...TGAGAAAAATGAGGTGCAGCTTCTATCCCAGGCAGCCTCCTCATCCTCTCCGTT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000106463.8 ENSMUST00000106464.3 ENSMUST00000155391.8 |
||
| CDS-3UTR CAA 90 bp | AGAAGGACTGGCTGCACAGTGCGATGCCTCGGTAAAGAGGGCATGAACGGAGAGCAACAACTCCTGATGTaGGCTCAGCTGGTCTCGAAG | + |
|
Preference number: 5 (lower is better) Translates to: RRTGCTVRCLGKEGMNGEQQLLM*AQLVSK Trigger: CTTCGAGACCAGCTGAGCCAACATCAGGAGTTGTTG...CTCTCCGTTCATGCCCTCTTTACCGAGGCATCGCACTGTGCAGCCAGTCCTTCT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000030452.13 ENSMUST00000106462.9 ENSMUST00000106463.8 ENSMUST00000106464.3 |
||
| CDS-3UTR CAA 90 bp | TGCACAGTGCGATGCCTCGGTAAAGAGGGCATGAACGGAGAGGATGAGGAGGCTCAACAACTCCTGATGTaGGCTCAGCTGGTCTCGAAG | + |
|
Preference number: 5 (lower is better) Translates to: CTVRCLGKEGMNGEDEEAQQLLM*AQLVSK Trigger: CTTCGAGACCAGCTGAGCCAACATCAGGAGTTGTTG...AGCCTCCTCATCCTCTCCGTTCATGCCCTCTTTACCGAGGCATCGCACTGTGCA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000030452.13 ENSMUST00000106462.9 ENSMUST00000106463.8 ENSMUST00000106464.3 |
||
| CDS-3UTR CAA 90 bp | GGCCCTCAAGGAACAGGTCCTCTTGCCCTAGACTCCAGGCATGGAACTGAGAGCGGGCCCTTTAGCTATTaGTTCCAGCAACAACTCCTG | + |
|
Preference number: 5 (lower is better) Translates to: GPQGTGPLALDSRHGTESGPFSY*FQQQLL Trigger: CAGGAGTTGTTGCTGGAACAAATAGCTAAAGGGCCC...GCTCTCAGTTCCATGCCTGGAGTCTAGGGCAAGAGGACCTGTTCCTTGAGGGCC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030452.13 |
||
| CDS-3UTR CAA 90 bp | GAGGGCATGAACGGAGAGGATGAGGAGGCTGCCTGGGATAGAAGCTGCACCTCAGGGCCCTTTAGCTATTaGTTCCAGCAACAACTCCTG | + |
|
Preference number: 5 (lower is better) Translates to: EGMNGEDEEAAWDRSCTSGPFSY*FQQQLL Trigger: CAGGAGTTGTTGCTGGAACAAATAGCTAAAGGGCCC...TGAGGTGCAGCTTCTATCCCAGGCAGCCTCCTCATCCTCTCCGTTCATGCCCTC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000030452.13 ENSMUST00000106462.9 ENSMUST00000106463.8 ENSMUST00000106464.3 |
||
| CDS-3UTR CAA 90 bp | GGCTGCACAGTGCGATGCCTCGGTAAAGAGGGCATGAACGGAGAGGATGAGGAGAGGTTAGGAAGGGAGTaGTTCTGGAGTTCCCTATCC | + |
|
Preference number: 5 (lower is better) Translates to: GCTVRCLGKEGMNGEDEERLGRE*FWSSLS Trigger: GGATAGGGAACTCCAGAACAACTCCCTTCCTAACCT...CTCCTCATCCTCTCCGTTCATGCCCTCTTTACCGAGGCATCGCACTGTGCAGCC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000106462.9 ENSMUST00000106463.8 ENSMUST00000106464.3 ENSMUST00000156206.2 |
||
| CDS-3UTR CAA 90 bp | TCACAAGTTCTTACAGGTCACTCTGGAAGATCGTGGGGCCCTCAAGGAACAGGTCTCACTCTGCAGCTCTaGGTGAAAGCCACTGGCAGG | + |
|
Preference number: 5 (lower is better) Translates to: SQVLTGHSGRSWGPQGTGLTLQL*VKATGR Trigger: CCTGCCAGTGGCTTTCACCAAGAGCTGCAGAGTGAG...ACCTGTTCCTTGAGGGCCCCACGATCTTCCAGAGTGACCTGTAAGAACTTGTGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030452.13 |
||
| CDS-3UTR CAA 90 bp | AGGACTGGCTGCACAGTGCGATGCCTCGGTAAAGAGGGCATGAACGGAGAGGATGGGCCCTTTAGCTATTaGTTCCAGCAACAACTCCTG | + |
|
Preference number: 5 (lower is better) Translates to: RTGCTVRCLGKEGMNGEDGPFSY*FQQQLL Trigger: CAGGAGTTGTTGCTGGAACAAATAGCTAAAGGGCCC...ATCCTCTCCGTTCATGCCCTCTTTACCGAGGCATCGCACTGTGCAGCCAGTCCT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000030452.13 ENSMUST00000106462.9 ENSMUST00000106463.8 ENSMUST00000106464.3 |
||
| CDS-3UTR CAA 90 bp | TGCACAGTGCGATGCCTCGGTAAAGAGGGCATGAACGGAGAGGATGAGGAGGCTGGGCCCTTTAGCTATTaGTTCCAGCAACAACTCCTG | + |
|
Preference number: 5 (lower is better) Translates to: CTVRCLGKEGMNGEDEEAGPFSY*FQQQLL Trigger: CAGGAGTTGTTGCTGGAACAAATAGCTAAAGGGCCC...AGCCTCCTCATCCTCTCCGTTCATGCCCTCTTTACCGAGGCATCGCACTGTGCA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000030452.13 ENSMUST00000106462.9 ENSMUST00000106463.8 ENSMUST00000106464.3 |
||
| CDS-3UTR CAA 90 bp | AGAAGGACTGGCTGCACAGTGCGATGCCTCGGTAAAGAGGGCATGAACGGAGAGAGGTTAGGAAGGGAGTaGTTCTGGAGTTCCCTATCC | + |
|
Preference number: 5 (lower is better) Translates to: RRTGCTVRCLGKEGMNGERLGRE*FWSSLS Trigger: GGATAGGGAACTCCAGAACAACTCCCTTCCTAACCT...CTCTCCGTTCATGCCCTCTTTACCGAGGCATCGCACTGTGCAGCCAGTCCTTCT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000106462.9 ENSMUST00000106463.8 ENSMUST00000106464.3 ENSMUST00000156206.2 |
||
| CDS-3UTR CAA 90 bp | AGGACTGGCTGCACAGTGCGATGCCTCGGTAAAGAGGGCATGAACGGAGAGGATAGGTTAGGAAGGGAGTaGTTCTGGAGTTCCCTATCC | + |
|
Preference number: 5 (lower is better) Translates to: RTGCTVRCLGKEGMNGEDRLGRE*FWSSLS Trigger: GGATAGGGAACTCCAGAACAACTCCCTTCCTAACCT...ATCCTCTCCGTTCATGCCCTCTTTACCGAGGCATCGCACTGTGCAGCCAGTCCT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000106462.9 ENSMUST00000106463.8 ENSMUST00000106464.3 ENSMUST00000156206.2 |
||
| CDS-3UTR CAA 90 bp | AAGCTACTTTATTTTGAATTAGCCAGGGAGAAGGACTGGCTGCACAGTGCGATGCAGCCCTTCCAGGCATaGCTCCAGAAGGGCTCTCCC | + |
|
Preference number: 5 (lower is better) Translates to: KLLYFELAREKDWLHSAMQPFQA*LQKGSP Trigger: GGGAGAGCCCTTCTGGAGCAATGCCTGGAAGGGCTG...CATCGCACTGTGCAGCCAGTCCTTCTCCCTGGCTAATTCAAAATAAAGTAGCTT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000030452.13 ENSMUST00000106462.9 ENSMUST00000106463.8 ENSMUST00000106464.3 ENSMUST00000155391.8 |
||
| CDS TCA 90 bp | CTCAGTCTCTCTCCAAGAGTGGGAGTCTTTAGAGCCCAAGGCTGTTaGGCTTGGGCCTCTGGCTGTAGAGGAAACTCGAAAGGGATACAA | + |
|
Preference number: 5 (lower is better) Translates to: LSLSPRVGVFRAQGC*AWASGCRGNSKGIQ Trigger: TTGTATCCCTTTCGAGTTTCCTCTACAGCCAGAGGCCCAAGCTCAACAGCCTTGGGCTCTAAAGACTCCCACTCTTGGAGAGAGACTGAG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030452.13 |
||
| CDS GCA 90 bp | CCTTCCAGGCATTGCTCCAGAAGGGCTCTCCCTTTGGGGCCCTCCTaGAGCAGTTTTAGTGATGCTTCTAGAGCACTGATCTTGAACATA | + |
|
Preference number: 5 (lower is better) Translates to: PSRHCSRRALPLGPS*SSFSDASRALILNI Trigger: TATGTTCAAGATCAGTGCTCTAGAAGCATCACTAAAACTGCTGCAGGAGGGCCCCAAAGGGAGAGCCCTTCTGGAGCAATGCCTGGAAGG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000030452.13 ENSMUST00000106463.8 ENSMUST00000106464.3 ENSMUST00000130828.8 ENSMUST00000155391.8 |
||
| CDS-3UTR CAA 90 bp | ATTAGCCAGGGAGAAGGACTGGCTGCACAGTGCGATGCCTCGGTAAAGAGGGCAGATCTTGAACATATGTaGCTCCCGATCCTTCAACAG | + |
|
Preference number: 5 (lower is better) Translates to: ISQGEGLAAQCDASVKRADLEHM*LPILQQ Trigger: CTGTTGAAGGATCGGGAGCAACATATGTTCAAGATC...TGCCCTCTTTACCGAGGCATCGCACTGTGCAGCCAGTCCTTCTCCCTGGCTAAT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000030452.13 ENSMUST00000106463.8 ENSMUST00000106464.3 ENSMUST00000155391.8 |
||
| CDS-3UTR CAA 90 bp | TGCACAGTGCGATGCCTCGGTAAAGAGGGCATGAACGGAGAGGATGAGGAGGCTGATCTTGAACATATGTaGCTCCCGATCCTTCAACAG | + |
|
Preference number: 5 (lower is better) Translates to: CTVRCLGKEGMNGEDEEADLEHM*LPILQQ Trigger: CTGTTGAAGGATCGGGAGCAACATATGTTCAAGATC...AGCCTCCTCATCCTCTCCGTTCATGCCCTCTTTACCGAGGCATCGCACTGTGCA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000030452.13 ENSMUST00000106463.8 ENSMUST00000106464.3 ENSMUST00000155391.8 |
||
| CDS-3UTR CAA 90 bp | GGCTGCACAGTGCGATGCCTCGGTAAAGAGGGCATGAACGGAGAGGATGAGGAGCCAACTTTCCTGGTCTaGCTTTCATTTGGTTTTGGA | + |
|
Preference number: 5 (lower is better) Translates to: GCTVRCLGKEGMNGEDEEPTFLV*LSFGFG Trigger: TCCAAAACCAAATGAAAGCAAGACCAGGAAAGTTGG...CTCCTCATCCTCTCCGTTCATGCCCTCTTTACCGAGGCATCGCACTGTGCAGCC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000030452.13 ENSMUST00000106462.9 ENSMUST00000106463.8 ENSMUST00000106464.3 ENSMUST00000155391.8 |
||
| CDS CCA 90 bp | CCCACAAAACCTGGTGCTCACTCTGCAGCTCTTGGTGAAAGCCACTaGCAGGACCCAACTTTCCTGGTCTTGCTTTCATTTGGTTTTGGA | + |
|
Preference number: 5 (lower is better) Translates to: PTKPGAHSAALGESH*QDPTFLVLLSFGFG Trigger: TCCAAAACCAAATGAAAGCAAGACCAGGAAAGTTGGGTCCTGCCAGTGGCTTTCACCAAGAGCTGCAGAGTGAGCACCAGGTTTTGTGGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000030452.13 ENSMUST00000106462.9 ENSMUST00000106463.8 ENSMUST00000106464.3 |
||
| CDS-3UTR CAA 90 bp | GGCATGAACGGAGAGGATGAGGAGGCTGCCTGGGATAGAAGCTGCACCTCATTTGATCTTGAACATATGTaGCTCCCGATCCTTCAACAG | + |
|
Preference number: 5 (lower is better) Translates to: GMNGEDEEAAWDRSCTSFDLEHM*LPILQQ Trigger: CTGTTGAAGGATCGGGAGCAACATATGTTCAAGATC...AAATGAGGTGCAGCTTCTATCCCAGGCAGCCTCCTCATCCTCTCCGTTCATGCC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000030452.13 ENSMUST00000106463.8 ENSMUST00000106464.3 ENSMUST00000155391.8 |
||
| CDS-3UTR CAA 90 bp | AGGACTGGCTGCACAGTGCGATGCCTCGGTAAAGAGGGCATGAACGGAGAGGATCCAACTTTCCTGGTCTaGCTTTCATTTGGTTTTGGA | + |
|
Preference number: 5 (lower is better) Translates to: RTGCTVRCLGKEGMNGEDPTFLV*LSFGFG Trigger: TCCAAAACCAAATGAAAGCAAGACCAGGAAAGTTGG...ATCCTCTCCGTTCATGCCCTCTTTACCGAGGCATCGCACTGTGCAGCCAGTCCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000030452.13 ENSMUST00000106462.9 ENSMUST00000106463.8 ENSMUST00000106464.3 ENSMUST00000155391.8 |
||
| CDS-3UTR CAA 90 bp | CTACTTTATTTTGAATTAGCCAGGGAGAAGGACTGGCTGCACAGTGCGATGCCTCAACAACTCCTGATGTaGGCTCAGCTGGTCTCGAAG | + |
|
Preference number: 5 (lower is better) Translates to: LLYFELAREKDWLHSAMPQQLLM*AQLVSK Trigger: CTTCGAGACCAGCTGAGCCAACATCAGGAGTTGTTG...AGGCATCGCACTGTGCAGCCAGTCCTTCTCCCTGGCTAATTCAAAATAAAGTAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000030452.13 ENSMUST00000106462.9 ENSMUST00000106463.8 ENSMUST00000106464.3 |
||
| CDS CCA 90 bp | GTGACAGCAGTGTCATTTCACTCTGCAGCTCTTGGTGAAAGCCACTaGCAGGACCCAACTTTCCTGGTCTTGCTTTCATTTGGTTTTGGA | + |
|
Preference number: 5 (lower is better) Translates to: VTAVSFHSAALGESH*QDPTFLVLLSFGFG Trigger: TCCAAAACCAAATGAAAGCAAGACCAGGAAAGTTGGGTCCTGCCAGTGGCTTTCACCAAGAGCTGCAGAGTGAAATGACACTGCTGTCAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000155391.8 |
||
| CDS-3UTR CAA 90 bp | AGGATGAGGAGGCTGCCTGGGATAGAAGCTGCACCTCATTTTTCTCACAAGTTCGATCTTGAACATATGTaGCTCCCGATCCTTCAACAG | + |
|
Preference number: 5 (lower is better) Translates to: RMRRLPGIEAAPHFSHKFDLEHM*LPILQQ Trigger: CTGTTGAAGGATCGGGAGCAACATATGTTCAAGATC...GAACTTGTGAGAAAAATGAGGTGCAGCTTCTATCCCAGGCAGCCTCCTCATCCT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000030452.13 ENSMUST00000106463.8 ENSMUST00000106464.3 ENSMUST00000155391.8 |
||
| CDS-3UTR CAA 90 bp | CTTTATTTTGAATTAGCCAGGGAGAAGGACTGGCTGCACAGTGCGATGCCTCGGCCAACTTTCCTGGTCTaGCTTTCATTTGGTTTTGGA | + |
|
Preference number: 5 (lower is better) Translates to: LYFELAREKDWLHSAMPRPTFLV*LSFGFG Trigger: TCCAAAACCAAATGAAAGCAAGACCAGGAAAGTTGG...CCGAGGCATCGCACTGTGCAGCCAGTCCTTCTCCCTGGCTAATTCAAAATAAAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000030452.13 ENSMUST00000106462.9 ENSMUST00000106463.8 ENSMUST00000106464.3 ENSMUST00000155391.8 |
||
| CDS-3UTR CAA 90 bp | TCTCACAAGTTCTTACAGGTCACTCTGGAAGATCGTGGGGCCCTCAAGGAACAGCCAACTTTCCTGGTCTaGCTTTCATTTGGTTTTGGA | + |
|
Preference number: 5 (lower is better) Translates to: SHKFLQVTLEDRGALKEQPTFLV*LSFGFG Trigger: TCCAAAACCAAATGAAAGCAAGACCAGGAAAGTTGG...CTGTTCCTTGAGGGCCCCACGATCTTCCAGAGTGACCTGTAAGAACTTGTGAGA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000030452.13 ENSMUST00000155391.8 |
||
| CDS-3UTR CAA 90 bp | GGGAGAATGAAGCTACTTTATTTTGAATTAGCCAGGGAGAAGGACTGGCTGCACAGGTTAGGAAGGGAGTaGTTCTGGAGTTCCCTATCC | + |
|
Preference number: 5 (lower is better) Translates to: GRMKLLYFELAREKDWLHRLGRE*FWSSLS Trigger: GGATAGGGAACTCCAGAACAACTCCCTTCCTAACCT...GTGCAGCCAGTCCTTCTCCCTGGCTAATTCAAAATAAAGTAGCTTCATTCTCCC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000106462.9 ENSMUST00000106463.8 ENSMUST00000106464.3 |
||
| CDS-3UTR CAA 90 bp | GAGGATGAGGAGGCTGCCTGGGATAGAAGCTGCACCTCATTTTTCTCACAAGTTCCAACTTTCCTGGTCTaGCTTTCATTTGGTTTTGGA | + |
|
Preference number: 5 (lower is better) Translates to: EDEEAAWDRSCTSFFSQVPTFLV*LSFGFG Trigger: TCCAAAACCAAATGAAAGCAAGACCAGGAAAGTTGG...AACTTGTGAGAAAAATGAGGTGCAGCTTCTATCCCAGGCAGCCTCCTCATCCTC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 5 transcripts: ENSMUST00000030452.13 ENSMUST00000106462.9 ENSMUST00000106463.8 ENSMUST00000106464.3 ENSMUST00000155391.8 |
||
| CDS-3UTR CAA 90 bp | AGAAGCTGCACCTCATTTTTCTCACAAGTTCTTACAGGTCACTCTGGAAGATCGTCTAGAGCACTGATCTaGAACATATGTTGCTCCCGA | + |
|
Preference number: 5 (lower is better) Translates to: RSCTSFFSQVLTGHSGRSSRALI*NICCSR Trigger: TCGGGAGCAACATATGTTCAAGATCAGTGCTCTAGA...CGATCTTCCAGAGTGACCTGTAAGAACTTGTGAGAAAAATGAGGTGCAGCTTCT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000030452.13 ENSMUST00000155391.8 |
||
| CDS CAA 90 bp | CTGACTCCGAAGGCCCTGCAGTTCCTTTTTCAGCCCTTCCAGGCATaGCTCCAGAAGGGCTCTCCCTTTGGGGCCCTCCTGCAGCAGTTT | + |
|
Preference number: 6 (lower is better) Translates to: LTPKALQFLFQPFQA*LQKGSPFGALLQQF Trigger: AAACTGCTGCAGGAGGGCCCCAAAGGGAGAGCCCTTCTGGAGCAATGCCTGGAAGGGCTGAAAAAGGAACTGCAGGGCCTTCGGAGTCAG 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 6 transcripts: ENSMUST00000030452.13 ENSMUST00000106462.9 ENSMUST00000106463.8 ENSMUST00000106464.3 ENSMUST00000130828.8 ENSMUST00000155391.8 |
||
| CDS CCA 72 bp | GCCCTTCCAGGCATTGCTCCAGAAGGGCTCTCCCTTTaGGGCCCTCCTGCAGCAGTTTTAGTGATGCTTCTA | + |
|
Preference number: 6 (lower is better) Translates to: ALPGIAPEGLSL*GPPAAVLVMLL Trigger: TAGAAGCATCACTAAAACTGCTGCAGGAGGGCCCCAAAGGGAGAGCCCTTCTGGAGCAATGCCTGGAAGGGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000030452.13 ENSMUST00000106462.9 ENSMUST00000106463.8 ENSMUST00000106464.3 ENSMUST00000130828.8 ENSMUST00000155391.8 |
||
| CDS CAA 72 bp | AGCCCTTCCAGGCATTGCTCCAGAAGGGCTCTCCCTTaGGGGCCCTCCTGCAGCAGTTTTAGTGATGCTTCT | + |
|
Preference number: 6 (lower is better) Translates to: SPSRHCSRRALP*GPSCSSFSDAS Trigger: AGAAGCATCACTAAAACTGCTGCAGGAGGGCCCCAAAGGGAGAGCCCTTCTGGAGCAATGCCTGGAAGGGCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 6 transcripts: ENSMUST00000030452.13 ENSMUST00000106462.9 ENSMUST00000106463.8 ENSMUST00000106464.3 ENSMUST00000130828.8 ENSMUST00000155391.8 |
||
| CDS TCA 72 bp | AAGAGACATGGTGAAAGCTCGTGCCAGAGGCAGCTTTaGCTGCTGGGCAGGAACGGAGTTCCTGAGGAGGTA | + |
|
Preference number: 6 (lower is better) Translates to: KRHGESSCQRQL*LLGRNGVPEEV Trigger: TACCTCCTCAGGAACTCCGTTCCTGCCCAGCAGTCAAAGCTGCCTCTGGCACGAGCTTTCACCATGTCTCTT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000156206.2 |
||
| CDS CAA 72 bp | CTCTTCCCACAAAACCTGGTGCTCACTCTGCAGCTCTaGGTGAAAGCCACTGGCAGGACCCAACTTTCCTGG | + |
|
Preference number: 6 (lower is better) Translates to: LFPQNLVLTLQL*VKATGRTQLSW Trigger: CCAGGAAAGTTGGGTCCTGCCAGTGGCTTTCACCAAGAGCTGCAGAGTGAGCACCAGGTTTTGTGGGAAGAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000030452.13 ENSMUST00000106462.9 ENSMUST00000106463.8 ENSMUST00000106464.3 |
||
| CDS TCA 72 bp | TCCCACAAAACCTGGTGCTCACTCTGCAGCTCTTGGTaGAAGCCACTGGCAGGACCCAACTTTCCTGGTCTT | + |
|
Preference number: 6 (lower is better) Translates to: SHKTWCSLCSSW*KPLAGPNFPGL Trigger: AAGACCAGGAAAGTTGGGTCCTGCCAGTGGCTTTCACCAAGAGCTGCAGAGTGAGCACCAGGTTTTGTGGGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000030452.13 ENSMUST00000106462.9 ENSMUST00000106463.8 ENSMUST00000106464.3 |
||
| CDS GCA 72 bp | CATTGCTCCAGAAGGGCTCTCCCTTTGGGGCCCTCCTaGAGCAGTTTTAGTGATGCTTCTAGAGCACTGATC | + |
|
Preference number: 6 (lower is better) Translates to: HCSRRALPLGPS*SSFSDASRALI Trigger: GATCAGTGCTCTAGAAGCATCACTAAAACTGCTGCAGGAGGGCCCCAAAGGGAGAGCCCTTCTGGAGCAATG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 6 transcripts: ENSMUST00000030452.13 ENSMUST00000106462.9 ENSMUST00000106463.8 ENSMUST00000106464.3 ENSMUST00000130828.8 ENSMUST00000155391.8 |
||
| CDS CCA 72 bp | TGTGGGCTTCAGTACAGCTCAGTCTCTCTCCAAGAGTaGGAGTCTTTAGAGCCCAAGGCTGTTGAGCTTGGG | + |
|
Preference number: 6 (lower is better) Translates to: CGLQYSSVSLQE*ESLEPKAVELG Trigger: CCCAAGCTCAACAGCCTTGGGCTCTAAAGACTCCCACTCTTGGAGAGAGACTGAGCTGTACTGAAGCCCACA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000030452.13 ENSMUST00000106463.8 ENSMUST00000106464.3 ENSMUST00000125671.8 ENSMUST00000130828.8 ENSMUST00000155391.8 |
||
| CDS TCA 72 bp | TCTCCAAGAGTGGGAGTCTTTAGAGCCCAAGGCTGTTaGGCTTGGGCCTCTGGCTGTAGAGGAAACTCGAAA | + |
|
Preference number: 6 (lower is better) Translates to: SPRVGVFRAQGC*AWASGCRGNSK Trigger: TTTCGAGTTTCCTCTACAGCCAGAGGCCCAAGCTCAACAGCCTTGGGCTCTAAAGACTCCCACTCTTGGAGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030452.13 |
||
| CDS TCA 72 bp | AGTGACAGCAGTGTCATTTCACTCTGCAGCTCTTGGTaGAAGCCACTGGCAGGACCCAACTTTCCTGGTCTT | + |
|
Preference number: 6 (lower is better) Translates to: SDSSVISLCSSW*KPLAGPNFPGL Trigger: AAGACCAGGAAAGTTGGGTCCTGCCAGTGGCTTTCACCAAGAGCTGCAGAGTGAAATGACACTGCTGTCACT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000155391.8 |
||
| CDS CAA 90 bp | GCAGCTCTTGGTGAAAGCCACTGGCAGGACCCAACTTTCCTGGTCTaGCTTTCATTTGGTTTTGGACTAGCTCTTGAACCTGACTCCGAA | + |
|
Preference number: 6 (lower is better) Translates to: AALGESHWQDPTFLV*LSFGFGLALEPDSE Trigger: TTCGGAGTCAGGTTCAAGAGCTAGTCCAAAACCAAATGAAAGCAAGACCAGGAAAGTTGGGTCCTGCCAGTGGCTTTCACCAAGAGCTGC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000030452.13 ENSMUST00000106462.9 ENSMUST00000106463.8 ENSMUST00000106464.3 ENSMUST00000130828.8 ENSMUST00000155391.8 |
||
| CDS TCA 72 bp | GTCTCGAAGCAACTTCAGTTCCTCCCGAAGAATTTCTaGCTCTTCCCACAAAACCTGGTGCTCACTCTGCAG | + |
|
Preference number: 6 (lower is better) Translates to: VSKQLQFLPKNF*LFPQNLVLTLQ Trigger: CTGCAGAGTGAGCACCAGGTTTTGTGGGAAGAGTCAGAAATTCTTCGGGAGGAACTGAAGTTGCTTCGAGAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000030452.13 ENSMUST00000106462.9 ENSMUST00000106463.8 ENSMUST00000106464.3 |
||
| CDS CAA 72 bp | GGTGAAAGCCACTGGCAGGACCCAACTTTCCTGGTCTaGCTTTCATTTGGTTTTGGACTAGCTCTTGAACCT | + |
|
Preference number: 6 (lower is better) Translates to: GESHWQDPTFLV*LSFGFGLALEP Trigger: AGGTTCAAGAGCTAGTCCAAAACCAAATGAAAGCAAGACCAGGAAAGTTGGGTCCTGCCAGTGGCTTTCACC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000030452.13 ENSMUST00000106462.9 ENSMUST00000106463.8 ENSMUST00000106464.3 ENSMUST00000130828.8 ENSMUST00000155391.8 |
||
| CDS TCA 72 bp | CAAACTCTGCTTAATCCGGGCCATATTTTCATCAGTTaGACTGAGAACCGCATGAAGCTGATCAGACCAGCT | + |
|
Preference number: 6 (lower is better) Translates to: QTLLNPGHIFIS*TENRMKLIRPA Trigger: AGCTGGTCTGATCAGCTTCATGCGGTTCTCAGTTCAACTGATGAAAATATGGCCCGGATTAAGCAGAGTTTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000106463.8 ENSMUST00000106464.3 ENSMUST00000125671.8 ENSMUST00000135499.8 |
||
| CDS TCA 72 bp | ATACAAACTCTTAATCCGGGCCATATTTTCATCAGTTaGACTGAGAACCGCATGAAGCTGATCAGACCAGCT | + |
|
Preference number: 6 (lower is better) Translates to: IQTLNPGHIFIS*TENRMKLIRPA Trigger: AGCTGGTCTGATCAGCTTCATGCGGTTCTCAGTTCAACTGATGAAAATATGGCCCGGATTAAGAGTTTGTAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000130828.8 ENSMUST00000155391.8 |
||