Pregenerated sensors for CCDC159 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000006241Ensembl transcript IDs: ENSMUST00000006403.7, ENSMUST00000170304.9, ENSMUST00000214734.2, ENSMUST00000216710.2
Found 164 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | AGGAGGGGCACTGAGAGCTCTTGCACTGGTGTCCTTTCTGGCCTCTaGGGCTGGAGGCCCTGGGTCTGGTGCCCATTGACAAAGCAAGAC | + |
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Preference number: 1 (lower is better) Translates to: RRGTESSCTGVLSGL*GWRPWVWCPLTKQD Trigger: GTCTTGCTTTGTCAATGGGCACCAGACCCAGGGCCTCCAGCCTCAGAGGCCAGAAAGGACACCAGTGCAAGAGCTCTCAGTGCCCCTCCT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000214734.2 |
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| 3UTR TCA 90 bp | ACCGGGAGGGTAGGATCCACTCTTGCTGAAAGGTCTCTCCCAGTCTaGATCGGAGTCCCAGGAGGGGCACTGAGAGCTCTTGCACTGGTG | + |
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Preference number: 1 (lower is better) Translates to: TGRVGSTLAERSLPV*IGVPGGALRALALV Trigger: CACCAGTGCAAGAGCTCTCAGTGCCCCTCCTGGGACTCCGATTCAGACTGGGAGAGACCTTTCAGCAAGAGTGGATCCTACCCTCCCGGT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000214734.2 |
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| 3UTR CCA 90 bp | CCAGCTCCTTCTGGAGGTCATCCTTACAGCAACCGTTGCCTTCTGTaGGCACCCCCTCGGCTTCTGGCCATGAATCGTATGCCTGCTGCT | + |
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Preference number: 1 (lower is better) Translates to: PAPSGGHPYSNRCLL*APPRLLAMNRMPAA Trigger: AGCAGCAGGCATACGATTCATGGCCAGAAGCCGAGGGGGTGCCCACAGAAGGCAACGGTTGCTGTAAGGATGACCTCCAGAAGGAGCTGG 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000214734.2 |
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| 3UTR CCA 90 bp | CAAGCAGTCCCAGCTGCTCAAGCTACAGGGAGAGAAGGTAGGTCGTaGTCTGGTTTGAACCAGGAGAACTCAGGGTTGCCAACCAGGGAC | + |
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Preference number: 1 (lower is better) Translates to: QAVPAAQATGREGRS*SGLNQENSGLPTRD Trigger: GTCCCTGGTTGGCAACCCTGAGTTCTCCTGGTTCAAACCAGACCACGACCTACCTTCTCTCCCTGTAGCTTGAGCAGCTGGGACTGCTTG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000214734.2 ENSMUST00000216710.2 |
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| 3UTR TCA 90 bp | CAGCTGCTCAAGCTACAGGGAGAGAAGGTAGGTCGTGGTCTGGTTTaGACCAGGAGAACTCAGGGTTGCCAACCAGGGACCAAATGCCCA | + |
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Preference number: 1 (lower is better) Translates to: QLLKLQGEKVGRGLV*TRRTQGCQPGTKCP Trigger: TGGGCATTTGGTCCCTGGTTGGCAACCCTGAGTTCTCCTGGTTCAAACCAGACCACGACCTACCTTCTCTCCCTGTAGCTTGAGCAGCTG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000214734.2 ENSMUST00000216710.2 |
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| 3UTR GCA 90 bp | ATATGTCACCCAGCTCCTTCTGGAGGTCATCCTTACAGCAACCGTTaGCTTCTGTGGGCACCCCCTCGGCTTCTGGCCATGAATCGTATG | + |
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Preference number: 1 (lower is better) Translates to: ICHPAPSGGHPYSNR*LLWAPPRLLAMNRM Trigger: CATACGATTCATGGCCAGAAGCCGAGGGGGTGCCCACAGAAGGCAACGGTTGCTGTAAGGATGACCTCCAGAAGGAGCTGGGTGACATAT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000214734.2 |
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| 3UTR CCA 90 bp | TGGAGGCCCTGGGTCTGGTGCCCATTGACAAAGCAAGACAGTCAATaGAGCTCTGCAGACTGTGAACGGCAGACCATATGTCACCCAGCT | + |
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Preference number: 1 (lower is better) Translates to: WRPWVWCPLTKQDSQ*SSADCERQTICHPA Trigger: AGCTGGGTGACATATGGTCTGCCGTTCACAGTCTGCAGAGCTCCATTGACTGTCTTGCTTTGTCAATGGGCACCAGACCCAGGGCCTCCA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000214734.2 |
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| 3UTR TCA 90 bp | GTGCCCATTGACAAAGCAAGACAGTCAATGGAGCTCTGCAGACTGTaGACGGCAGACCATATGTCACCCAGCTCCTTCTGGAGGTCATCC | + |
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Preference number: 1 (lower is better) Translates to: VPIDKARQSMELCRL*TADHMSPSSFWRSS Trigger: GGATGACCTCCAGAAGGAGCTGGGTGACATATGGTCTGCCGTTCACAGTCTGCAGAGCTCCATTGACTGTCTTGCTTTGTCAATGGGCAC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000214734.2 |
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| 3UTR TCA 90 bp | TATGCCTGCTGCTTCATCTTGGTAAGAACCTTGCGGCACTTCACCTaGGTTTTCTGCATCTTCTGGATATTCAGGAGATTCTCTGAGATC | + |
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Preference number: 1 (lower is better) Translates to: YACCFILVRTLRHFT*VFCIFWIFRRFSEI Trigger: GATCTCAGAGAATCTCCTGAATATCCAGAAGATGCAGAAAACTCAGGTGAAGTGCCGCAAGGTTCTTACCAAGATGAAGCAGCAGGCATA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000214734.2 |
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| 3UTR-3UTR TCA 90 bp | ACTCAGGGTTGCCAACCAGGGACCAAATGCCCAGATAGAGTGCCAGCCTCGAGGGGGATGGAGAGGGGCTaGGTAGGGTCTGTACCGGGA | + |
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Preference number: 2 (lower is better) Translates to: TQGCQPGTKCPDRVPASRGMERG*VGSVPG Trigger: TCCCGGTACAGACCCTACTCAGCCCCTCTCCATCCC...CCTCGAGGCTGGCACTCTATCTGGGCATTTGGTCCCTGGTTGGCAACCCTGAGT 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000214734.2 |
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| 3UTR-3UTR TCA 90 bp | ACTCAGGGTTGCCAACCAGGGACCAAATGCCCAGATAGAGTGCCAGCCTCGAGGTCCCAGGAGGGGCACTaGGAGCTCTTGCACTGGTGT | + |
|
Preference number: 2 (lower is better) Translates to: TQGCQPGTKCPDRVPASRSQEGH*ELLHWC Trigger: ACACCAGTGCAAGAGCTCTCAGTGCCCCTCCTGGGA...CCTCGAGGCTGGCACTCTATCTGGGCATTTGGTCCCTGGTTGGCAACCCTGAGT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000214734.2 |
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| 3UTR-3UTR GCA 90 bp | CCCAGTCTGAATCGGAGTCCCAGGAGGGGCACTGAGAGCTCTTGCACTGGTGTCAGGCCCTGGGTCTGGTaGCCATTGACAAAGCAAGAC | + |
|
Preference number: 2 (lower is better) Translates to: PSLNRSPRRGTESSCTGVRPWVW*PLTKQD Trigger: GTCTTGCTTTGTCAATGGGCACCAGACCCAGGGCCT...GACACCAGTGCAAGAGCTCTCAGTGCCCCTCCTGGGACTCCGATTCAGACTGGG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000214734.2 |
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| 3UTR CAA 90 bp | CCAGCTGCTCAAGCTACAGGGAGAGAAGGTAGGTCGTGGTCTGGTTaGAACCAGGAGAACTCAGGGTTGCCAACCAGGGACCAAATGCCC | + |
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Preference number: 2 (lower is better) Translates to: PAAQATGREGRSWSG*NQENSGLPTRDQMP Trigger: GGGCATTTGGTCCCTGGTTGGCAACCCTGAGTTCTCCTGGTTCAAACCAGACCACGACCTACCTTCTCTCCCTGTAGCTTGAGCAGCTGG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000214734.2 ENSMUST00000216710.2 |
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| 3UTR-3UTR TCA 90 bp | TTTTCTCTCTGGAGGGATCTTCAGGGCAAGCAGTCCCAGCTGCTCAAGCTACAGGGTCGTGGTCTGGTTTaGACCAGGAGAACTCAGGGT | + |
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Preference number: 2 (lower is better) Translates to: FSLWRDLQGKQSQLLKLQGRGLV*TRRTQG Trigger: ACCCTGAGTTCTCCTGGTTCAAACCAGACCACGACC...CTGTAGCTTGAGCAGCTGGGACTGCTTGCCCTGAAGATCCCTCCAGAGAGAAAA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000214734.2 ENSMUST00000216710.2 |
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| 3UTR-3UTR GCA 90 bp | GGCAGACCATATGTCACCCAGCTCCTTCTGGAGGTCATCCTTACAGCAACCGTTGAATCGTATGCCTGCTaGTTCATCTTGGTAAGAACC | + |
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Preference number: 2 (lower is better) Translates to: GRPYVTQLLLEVILTATVESYAC*FILVRT Trigger: GGTTCTTACCAAGATGAAGCAGCAGGCATACGATTC...AACGGTTGCTGTAAGGATGACCTCCAGAAGGAGCTGGGTGACATATGGTCTGCC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000214734.2 |
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| 3UTR-3UTR CCA 90 bp | TATTTTCTCTCTGGAGGGATCTTCAGGGCAAGCAGTCCCAGCTGCTCAAGCTACGTTTTCTGCATCTTCTaGATATTCAGGAGATTCTCT | + |
|
Preference number: 2 (lower is better) Translates to: YFLSGGIFRASSPSCSSYVFCIF*IFRRFS Trigger: AGAGAATCTCCTGAATATCCAGAAGATGCAGAAAAC...GTAGCTTGAGCAGCTGGGACTGCTTGCCCTGAAGATCCCTCCAGAGAGAAAATA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000214734.2 |
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| 3UTR GCA 72 bp | CCAGCTCCTTCTGGAGGTCATCCTTACAGCAACCGTTaGCTTCTGTGGGCACCCCCTCGGCTTCTGGCCATG | + |
|
Preference number: 3 (lower is better) Translates to: PAPSGGHPYSNR*LLWAPPRLLAM Trigger: CATGGCCAGAAGCCGAGGGGGTGCCCACAGAAGGCAACGGTTGCTGTAAGGATGACCTCCAGAAGGAGCTGG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000214734.2 |
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| 3UTR GCA 72 bp | ACCAGGAGAACTCAGGGTTGCCAACCAGGGACCAAATaGCCAGATAGAGTGCCAGCCTCGAGGCCTACACTG | + |
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Preference number: 3 (lower is better) Translates to: TRRTQGCQPGTK*PDRVPASRPTL Trigger: CAGTGTAGGCCTCGAGGCTGGCACTCTATCTGGGCATTTGGTCCCTGGTTGGCAACCCTGAGTTCTCCTGGT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000214734.2 ENSMUST00000216710.2 |
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| 3UTR-3UTR CAA 90 bp | TTTTCTCTCTGGAGGGATCTTCAGGGCAAGCAGTCCCAGCTGCTCAAGCTACAGTCCTTACAGCAACCGTaGCCTTCTGTGGGCACCCCC | + |
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Preference number: 3 (lower is better) Translates to: FSLWRDLQGKQSQLLKLQSLQQP*PSVGTP Trigger: GGGGGTGCCCACAGAAGGCAACGGTTGCTGTAAGGA...CTGTAGCTTGAGCAGCTGGGACTGCTTGCCCTGAAGATCCCTCCAGAGAGAAAA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000214734.2 |
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| 3UTR CCA 72 bp | TCTGGAGGTCATCCTTACAGCAACCGTTGCCTTCTGTaGGCACCCCCTCGGCTTCTGGCCATGAATCGTATG | + |
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Preference number: 3 (lower is better) Translates to: SGGHPYSNRCLL*APPRLLAMNRM Trigger: CATACGATTCATGGCCAGAAGCCGAGGGGGTGCCCACAGAAGGCAACGGTTGCTGTAAGGATGACCTCCAGA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000214734.2 |
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| 3UTR TCA 72 bp | GTTGCCTTCTGTGGGCACCCCCTCGGCTTCTGGCCATaGATCGTATGCCTGCTGCTTCATCTTGGTAAGAAC | + |
|
Preference number: 3 (lower is better) Translates to: VAFCGHPLGFWP*IVCLLLHLGKN Trigger: GTTCTTACCAAGATGAAGCAGCAGGCATACGATTCATGGCCAGAAGCCGAGGGGGTGCCCACAGAAGGCAAC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000214734.2 |
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| 3UTR TCA 72 bp | GTAGGATCCACTCTTGCTGAAAGGTCTCTCCCAGTCTaGATCGGAGTCCCAGGAGGGGCACTGAGAGCTCTT | + |
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Preference number: 3 (lower is better) Translates to: VGSTLAERSLPV*IGVPGGALRAL Trigger: AAGAGCTCTCAGTGCCCCTCCTGGGACTCCGATTCAGACTGGGAGAGACCTTTCAGCAAGAGTGGATCCTAC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000214734.2 |
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| 3UTR TCA 72 bp | AAGCTACAGGGAGAGAAGGTAGGTCGTGGTCTGGTTTaGACCAGGAGAACTCAGGGTTGCCAACCAGGGACC | + |
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Preference number: 3 (lower is better) Translates to: KLQGEKVGRGLV*TRRTQGCQPGT Trigger: GGTCCCTGGTTGGCAACCCTGAGTTCTCCTGGTTCAAACCAGACCACGACCTACCTTCTCTCCCTGTAGCTT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000214734.2 ENSMUST00000216710.2 |
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| 3UTR CCA 72 bp | CCAGCTGCTCAAGCTACAGGGAGAGAAGGTAGGTCGTaGTCTGGTTTGAACCAGGAGAACTCAGGGTTGCCA | + |
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Preference number: 3 (lower is better) Translates to: PAAQATGREGRS*SGLNQENSGLP Trigger: TGGCAACCCTGAGTTCTCCTGGTTCAAACCAGACCACGACCTACCTTCTCTCCCTGTAGCTTGAGCAGCTGG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000214734.2 ENSMUST00000216710.2 |
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| 3UTR TCA 72 bp | TGCTTCATCTTGGTAAGAACCTTGCGGCACTTCACCTaGGTTTTCTGCATCTTCTGGATATTCAGGAGATTC | + |
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Preference number: 3 (lower is better) Translates to: CFILVRTLRHFT*VFCIFWIFRRF Trigger: GAATCTCCTGAATATCCAGAAGATGCAGAAAACTCAGGTGAAGTGCCGCAAGGTTCTTACCAAGATGAAGCA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000214734.2 |
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| CDS-3UTR CCA 90 bp | TCTCTGGAGGGATCTTCAGGGCAAGCAGTCCCAGCTGCTCAAGCTACAGGGAGAGCTGCAGGCAGCGAGTaGTACGGGCCCGTTGCAGCT | + |
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Preference number: 4 (lower is better) Translates to: SLEGSSGQAVPAAQATGRAAGSE*YGPVAA Trigger: AGCTGCAACGGGCCCGTACCACTCGCTGCCTGCAGC...TCTCCCTGTAGCTTGAGCAGCTGGGACTGCTTGCCCTGAAGATCCCTCCAGAGA 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000214734.2 ENSMUST00000216710.2 |
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| CDS-3UTR TCA 90 bp | GGAGGGATCTTCAGGGCAAGCAGTCCCAGCTGCTCAAGCTACAGGGAGAGAAGGTCGAAAGCCTTGCTCTaGGCCTGCAGCTGGCTCCTG | + |
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Preference number: 4 (lower is better) Translates to: GGIFRASSPSCSSYRERRSKALL*ACSWLL Trigger: CAGGAGCCAGCTGCAGGCTCAGAGCAAGGCTTTCGA...CCTTCTCTCCCTGTAGCTTGAGCAGCTGGGACTGCTTGCCCTGAAGATCCCTCC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000214734.2 ENSMUST00000216710.2 |
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| CDS-3UTR TCA 90 bp | CAGGGCAAGCAGTCCCAGCTGCTCAAGCTACAGGGAGAGAAGGTAGGTCGTGGTTCCCAGGAGGGGCACTaGGAGCTCTTGCACTGGTGT | + |
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Preference number: 4 (lower is better) Translates to: QGKQSQLLKLQGEKVGRGSQEGH*ELLHWC Trigger: ACACCAGTGCAAGAGCTCTCAGTGCCCCTCCTGGGA...ACCACGACCTACCTTCTCTCCCTGTAGCTTGAGCAGCTGGGACTGCTTGCCCTG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000216710.2 |
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| CDS-3UTR TCA 90 bp | TCTCTCTGGAGGGATCTTCAGGGCAAGCAGTCCCAGCTGCTCAAGCTACAGGGAGGGATGGAGAGGGGCTaGGTAGGGTCTGTACCGGGA | + |
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Preference number: 4 (lower is better) Translates to: SLWRDLQGKQSQLLKLQGGMERG*VGSVPG Trigger: TCCCGGTACAGACCCTACTCAGCCCCTCTCCATCCC...TCCCTGTAGCTTGAGCAGCTGGGACTGCTTGCCCTGAAGATCCCTCCAGAGAGA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000216710.2 |
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| CDS-3UTR GCA 90 bp | AAGCAGTCCCAGCTGCTCAAGCTACAGGGAGAGAAGGTAGGTCGTGGTCTGGTTTCCCGGGCCAACAGCTaGAGGCAGCGAGTGGTACGG | + |
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Preference number: 4 (lower is better) Translates to: KQSQLLKLQGEKVGRGLVSRANS*RQRVVR Trigger: CCGTACCACTCGCTGCCTGCAGCTGTTGGCCCGGGA...AACCAGACCACGACCTACCTTCTCTCCCTGTAGCTTGAGCAGCTGGGACTGCTT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000214734.2 ENSMUST00000216710.2 |
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| CDS-3UTR TCA 90 bp | GCAGTCCCAGCTGCTCAAGCTACAGGGAGAGAAGGTAGGTCGTGGTCTGGTTTGCCTGCAGCTGGCTCCTaGGAGACTCCAGTTCGCATC | + |
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Preference number: 4 (lower is better) Translates to: AVPAAQATGREGRSWSGLPAAGS*ETPVRI Trigger: GATGCGAACTGGAGTCTCTCAGGAGCCAGCTGCAGG...CAAACCAGACCACGACCTACCTTCTCTCCCTGTAGCTTGAGCAGCTGGGACTGC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000214734.2 ENSMUST00000216710.2 |
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| CDS-3UTR CCA 90 bp | TCTCTGGAGGGATCTTCAGGGCAAGCAGTCCCAGCTGCTCAAGCTACAGGGAGACCATACTTCTCTCCTTaGCGGCTCGTGGGGCTCAGC | + |
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Preference number: 4 (lower is better) Translates to: SLEGSSGQAVPAAQATGRPYFSP*RLVGLS Trigger: GCTGAGCCCCACGAGCCGCCAAGGAGAGAAGTATGG...TCTCCCTGTAGCTTGAGCAGCTGGGACTGCTTGCCCTGAAGATCCCTCCAGAGA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000214734.2 ENSMUST00000216710.2 |
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| CDS-3UTR CCA 90 bp | TGGAGGGATCTTCAGGGCAAGCAGTCCCAGCTGCTCAAGCTACAGGGAGAGAAGCACTGGTGTCCTTTCTaGCCTCTGAGGCTGGAGGCC | + |
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Preference number: 4 (lower is better) Translates to: WRDLQGKQSQLLKLQGEKHWCPF*PLRLEA Trigger: GGCCTCCAGCCTCAGAGGCCAGAAAGGACACCAGTG...CTTCTCTCCCTGTAGCTTGAGCAGCTGGGACTGCTTGCCCTGAAGATCCCTCCA 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000216710.2 |
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| CDS-3UTR TCA 90 bp | AGGCTGGAGGCCCTGGGTCTGGTGCCCATTGACAAAGCAAGACAGTCAATGGAGCTCTCCAGGAGGTGGTaGGTACTGGCTCCTCTCCTT | + |
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Preference number: 4 (lower is better) Translates to: RLEALGLVPIDKARQSMELSRRW*VLAPLL Trigger: AAGGAGAGGAGCCAGTACTCACCACCTCCTGGAGAG...CTCCATTGACTGTCTTGCTTTGTCAATGGGCACCAGACCCAGGGCCTCCAGCCT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000214734.2 |
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| CDS-3UTR GCA 90 bp | TATGTCACCCAGCTCCTTCTGGAGGTCATCCTTACAGCAACCGTTGCCTTCTGTTCCCGGGCCAACAGCTaGAGGCAGCGAGTGGTACGG | + |
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Preference number: 4 (lower is better) Translates to: YVTQLLLEVILTATVAFCSRANS*RQRVVR Trigger: CCGTACCACTCGCTGCCTGCAGCTGTTGGCCCGGGA...ACAGAAGGCAACGGTTGCTGTAAGGATGACCTCCAGAAGGAGCTGGGTGACATA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000214734.2 |
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| CDS-3UTR CCA 90 bp | GCAGTCCCAGCTGCTCAAGCTACAGGGAGAGAAGGTAGGTCGTGGTCTGGTTTGCTCCTTGGCGGCTCGTaGGGCTCAGCACTTCTTCAA | + |
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Preference number: 4 (lower is better) Translates to: AVPAAQATGREGRSWSGLLLGGS*GSALLQ Trigger: TTGAAGAAGTGCTGAGCCCCACGAGCCGCCAAGGAG...CAAACCAGACCACGACCTACCTTCTCTCCCTGTAGCTTGAGCAGCTGGGACTGC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000214734.2 ENSMUST00000216710.2 |
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| CDS-3UTR TCA 90 bp | CAGCTAGTTTATTTTCTCTCTGGAGGGATCTTCAGGGCAAGCAGTCCCAGCTGCGTCCAAAGCCTTGTCTaGGGAGGGCCCAGGCTCTCC | + |
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Preference number: 4 (lower is better) Translates to: QLVYFLSGGIFRASSPSCVQSLV*GGPRLS Trigger: GGAGAGCCTGGGCCCTCCTCAGACAAGGCTTTGGAC...GCAGCTGGGACTGCTTGCCCTGAAGATCCCTCCAGAGAGAAAATAAACTAGCTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000006403.7 ENSMUST00000170304.9 ENSMUST00000214734.2 |
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| CDS-3UTR TCA 90 bp | CTCAGGGTTGCCAACCAGGGACCAAATGCCCAGATAGAGTGCCAGCCTCGAGGCAACTTTTACTTTGGCTaGGCTGGGCTCCAGGGACTT | + |
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Preference number: 4 (lower is better) Translates to: LRVANQGPNAQIECQPRGNFYFG*AGLQGL Trigger: AAGTCCCTGGAGCCCAGCTCAGCCAAAGTAAAAGTT...GCCTCGAGGCTGGCACTCTATCTGGGCATTTGGTCCCTGGTTGGCAACCCTGAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000214734.2 |
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| CDS-3UTR GCA 90 bp | GGGTGGAGAAAGGTCTCAGCTAGTTTATTTTCTCTCTGGAGGGATCTTCAGGGCTCCCGGGCCAACAGCTaGAGGCAGCGAGTGGTACGG | + |
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Preference number: 4 (lower is better) Translates to: GWRKVSASLFSLWRDLQGSRANS*RQRVVR Trigger: CCGTACCACTCGCTGCCTGCAGCTGTTGGCCCGGGA...GCCCTGAAGATCCCTCCAGAGAGAAAATAAACTAGCTGAGACCTTTCTCCACCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000006403.7 ENSMUST00000170304.9 |
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| CDS-3UTR GCA 90 bp | TTTTCTCTCTGGAGGGATCTTCAGGGCAAGCAGTCCCAGCTGCTCAAGCTACAGCCCACAGGAACTTCTTaGTGTCCCGGATCTCCCGGG | + |
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Preference number: 4 (lower is better) Translates to: FSLWRDLQGKQSQLLKLQPTGTS*CPGSPG Trigger: CCCGGGAGATCCGGGACAGCAAGAAGTTCCTGTGGG...CTGTAGCTTGAGCAGCTGGGACTGCTTGCCCTGAAGATCCCTCCAGAGAGAAAA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000216710.2 |
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| CDS-3UTR GCA 90 bp | TCTCTCTGGAGGGATCTTCAGGGCAAGCAGTCCCAGCTGCTCAAGCTACAGGGAAGGCCCTGGGTCTGGTaGCCATTGACAAAGCAAGAC | + |
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Preference number: 4 (lower is better) Translates to: SLWRDLQGKQSQLLKLQGRPWVW*PLTKQD Trigger: GTCTTGCTTTGTCAATGGGCACCAGACCCAGGGCCT...TCCCTGTAGCTTGAGCAGCTGGGACTGCTTGCCCTGAAGATCCCTCCAGAGAGA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000216710.2 |
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| CDS-3UTR CCA 90 bp | CTAGTTTATTTTCTCTCTGGAGGGATCTTCAGGGCAAGCAGTCCCAGCTGCTCAGCTGCAGGCAGCGAGTaGTACGGGCCCGTTGCAGCT | + |
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Preference number: 4 (lower is better) Translates to: LVYFLSGGIFRASSPSCSAAGSE*YGPVAA Trigger: AGCTGCAACGGGCCCGTACCACTCGCTGCCTGCAGC...TGAGCAGCTGGGACTGCTTGCCCTGAAGATCCCTCCAGAGAGAAAATAAACTAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000214734.2 ENSMUST00000216710.2 |
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| CDS-3UTR TCA 90 bp | TCAGCTAGTTTATTTTCTCTCTGGAGGGATCTTCAGGGCAAGCAGTCCCAGCTGGTCCAAAGCCTTGTCTaGGGAGGGCCCAGGCTCTCC | + |
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Preference number: 4 (lower is better) Translates to: SASLFSLWRDLQGKQSQLVQSLV*GGPRLS Trigger: GGAGAGCCTGGGCCCTCCTCAGACAAGGCTTTGGAC...CAGCTGGGACTGCTTGCCCTGAAGATCCCTCCAGAGAGAAAATAAACTAGCTGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000006403.7 ENSMUST00000170304.9 ENSMUST00000214734.2 |
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| CDS-3UTR TCA 90 bp | TATTTTCTCTCTGGAGGGATCTTCAGGGCAAGCAGTCCCAGCTGCTCAAGCTACTCGAAAGCCTTGCTCTaGGCCTGCAGCTGGCTCCTG | + |
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Preference number: 4 (lower is better) Translates to: YFLSGGIFRASSPSCSSYSKALL*ACSWLL Trigger: CAGGAGCCAGCTGCAGGCTCAGAGCAAGGCTTTCGA...GTAGCTTGAGCAGCTGGGACTGCTTGCCCTGAAGATCCCTCCAGAGAGAAAATA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000214734.2 ENSMUST00000216710.2 |
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| CDS-3UTR TCA 90 bp | TCAGGGCAAGCAGTCCCAGCTGCTCAAGCTACAGGGAGAGAAGGTAGGTCGTGGAGCATGGTCACAGAGTaGTTCAGGAACTCGAAAGCC | + |
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Preference number: 4 (lower is better) Translates to: SGQAVPAAQATGREGRSWSMVTE*FRNSKA Trigger: GGCTTTCGAGTTCCTGAATCACTCTGTGACCATGCT...CCACGACCTACCTTCTCTCCCTGTAGCTTGAGCAGCTGGGACTGCTTGCCCTGA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000214734.2 ENSMUST00000216710.2 |
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| CDS-3UTR TCA 90 bp | CAGGGCAAGCAGTCCCAGCTGCTCAAGCTACAGGGAGAGAAGGTAGGTCGTGGTTTGCGGCACTTCACCTaGGTTTTCTGCATCTTCTGG | + |
|
Preference number: 4 (lower is better) Translates to: QGKQSQLLKLQGEKVGRGLRHFT*VFCIFW Trigger: CCAGAAGATGCAGAAAACTCAGGTGAAGTGCCGCAA...ACCACGACCTACCTTCTCTCCCTGTAGCTTGAGCAGCTGGGACTGCTTGCCCTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000216710.2 |
||
| CDS-3UTR GCA 90 bp | AAGGTCTCAGCTAGTTTATTTTCTCTCTGGAGGGATCTTCAGGGCAAGCAGTCCTCCCGGGCCAACAGCTaGAGGCAGCGAGTGGTACGG | + |
|
Preference number: 4 (lower is better) Translates to: KVSASLFSLWRDLQGKQSSRANS*RQRVVR Trigger: CCGTACCACTCGCTGCCTGCAGCTGTTGGCCCGGGA...GGACTGCTTGCCCTGAAGATCCCTCCAGAGAGAAAATAAACTAGCTGAGACCTT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000006403.7 ENSMUST00000170304.9 ENSMUST00000214734.2 ENSMUST00000216710.2 |
||
| CDS-3UTR CCA 90 bp | AGGCTGGAGGCCCTGGGTCTGGTGCCCATTGACAAAGCAAGACAGTCAATGGAGCAGGCTCCAAAACCCTaGACCAGTGGGTCATACAGT | + |
|
Preference number: 4 (lower is better) Translates to: RLEALGLVPIDKARQSMEQAPKP*TSGSYS Trigger: ACTGTATGACCCACTGGTCCAGGGTTTTGGAGCCTG...CTCCATTGACTGTCTTGCTTTGTCAATGGGCACCAGACCCAGGGCCTCCAGCCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000214734.2 |
||
| CDS-3UTR CCA 90 bp | CAGCTAGTTTATTTTCTCTCTGGAGGGATCTTCAGGGCAAGCAGTCCCAGCTGCCCATACTTCTCTCCTTaGCGGCTCGTGGGGCTCAGC | + |
|
Preference number: 4 (lower is better) Translates to: QLVYFLSGGIFRASSPSCPYFSP*RLVGLS Trigger: GCTGAGCCCCACGAGCCGCCAAGGAGAGAAGTATGG...GCAGCTGGGACTGCTTGCCCTGAAGATCCCTCCAGAGAGAAAATAAACTAGCTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000006403.7 ENSMUST00000170304.9 ENSMUST00000214734.2 ENSMUST00000216710.2 |
||
| CDS-3UTR CCA 90 bp | AAGGTCTCAGCTAGTTTATTTTCTCTCTGGAGGGATCTTCAGGGCAAGCAGTCCGCTGCAGGCAGCGAGTaGTACGGGCCCGTTGCAGCT | + |
|
Preference number: 4 (lower is better) Translates to: KVSASLFSLWRDLQGKQSAAGSE*YGPVAA Trigger: AGCTGCAACGGGCCCGTACCACTCGCTGCCTGCAGC...GGACTGCTTGCCCTGAAGATCCCTCCAGAGAGAAAATAAACTAGCTGAGACCTT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000006403.7 ENSMUST00000170304.9 ENSMUST00000214734.2 ENSMUST00000216710.2 |
||
| CDS-3UTR CCA 90 bp | GGTGGAGAAAGGTCTCAGCTAGTTTATTTTCTCTCTGGAGGGATCTTCAGGGCAGCTGCAGGCAGCGAGTaGTACGGGCCCGTTGCAGCT | + |
|
Preference number: 4 (lower is better) Translates to: GGERSQLVYFLSGGIFRAAAGSE*YGPVAA Trigger: AGCTGCAACGGGCCCGTACCACTCGCTGCCTGCAGC...TGCCCTGAAGATCCCTCCAGAGAGAAAATAAACTAGCTGAGACCTTTCTCCACC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000006403.7 ENSMUST00000170304.9 |
||
| CDS-3UTR CCA 90 bp | CTCTGGAGGGATCTTCAGGGCAAGCAGTCCCAGCTGCTCAAGCTACAGGGAGAGTCACCCAGCTCCTTCTaGAGGTCATCCTTACAGCAA | + |
|
Preference number: 4 (lower is better) Translates to: LWRDLQGKQSQLLKLQGESPSSF*RSSLQQ Trigger: TTGCTGTAAGGATGACCTCCAGAAGGAGCTGGGTGA...CTCTCCCTGTAGCTTGAGCAGCTGGGACTGCTTGCCCTGAAGATCCCTCCAGAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000216710.2 |
||
| 3UTR CAA 72 bp | CAAGCTACAGGGAGAGAAGGTAGGTCGTGGTCTGGTTaGAACCAGGAGAACTCAGGGTTGCCAACCAGGGAC | + |
|
Preference number: 4 (lower is better) Translates to: QATGREGRSWSG*NQENSGLPTRD Trigger: GTCCCTGGTTGGCAACCCTGAGTTCTCCTGGTTCAAACCAGACCACGACCTACCTTCTCTCCCTGTAGCTTG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000214734.2 ENSMUST00000216710.2 |
||
| CDS-3UTR TCA 90 bp | TCTCAGCTAGTTTATTTTCTCTCTGGAGGGATCTTCAGGGCAAGCAGTCCCAGCCCTGCAGCTGGCTCCTaGGAGACTCCAGTTCGCATC | + |
|
Preference number: 4 (lower is better) Translates to: SQLVYFLSGGIFRASSPSPAAGS*ETPVRI Trigger: GATGCGAACTGGAGTCTCTCAGGAGCCAGCTGCAGG...GCTGGGACTGCTTGCCCTGAAGATCCCTCCAGAGAGAAAATAAACTAGCTGAGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000006403.7 ENSMUST00000170304.9 ENSMUST00000214734.2 ENSMUST00000216710.2 |
||
| CDS-3UTR TCA 90 bp | AGGTCTCAGCTAGTTTATTTTCTCTCTGGAGGGATCTTCAGGGCAAGCAGTCCCCCTGCAGCTGGCTCCTaGGAGACTCCAGTTCGCATC | + |
|
Preference number: 4 (lower is better) Translates to: RSQLVYFLSGGIFRASSPPAAGS*ETPVRI Trigger: GATGCGAACTGGAGTCTCTCAGGAGCCAGCTGCAGG...GGGACTGCTTGCCCTGAAGATCCCTCCAGAGAGAAAATAAACTAGCTGAGACCT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000006403.7 ENSMUST00000170304.9 ENSMUST00000214734.2 ENSMUST00000216710.2 |
||
| CDS-3UTR TCA 90 bp | AGGCTGGAGGCCCTGGGTCTGGTGCCCATTGACAAAGCAAGACAGTCAATGGAGCAAGCTGCTGAATCTTaGTCTGCTGTAGGCAGCTCT | + |
|
Preference number: 4 (lower is better) Translates to: RLEALGLVPIDKARQSMEQAAES*SAVGSS Trigger: AGAGCTGCCTACAGCAGATCAAGATTCAGCAGCTTG...CTCCATTGACTGTCTTGCTTTGTCAATGGGCACCAGACCCAGGGCCTCCAGCCT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000214734.2 |
||
| CDS-3UTR TCA 90 bp | GGAGGGATCTTCAGGGCAAGCAGTCCCAGCTGCTCAAGCTACAGGGAGAGAAGGATTCAGGAGATTCTCTaGGATCTCATCCTCCTGGTC | + |
|
Preference number: 4 (lower is better) Translates to: GGIFRASSPSCSSYRERRIQEIL*DLILLV Trigger: GACCAGGAGGATGAGATCTCAGAGAATCTCCTGAAT...CCTTCTCTCCCTGTAGCTTGAGCAGCTGGGACTGCTTGCCCTGAAGATCCCTCC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000216710.2 |
||
| CDS-3UTR TCA 90 bp | TCAGCTAGTTTATTTTCTCTCTGGAGGGATCTTCAGGGCAAGCAGTCCCAGCTGTCCCAGGAGGGGCACTaGGAGCTCTTGCACTGGTGT | + |
|
Preference number: 4 (lower is better) Translates to: SASLFSLWRDLQGKQSQLSQEGH*ELLHWC Trigger: ACACCAGTGCAAGAGCTCTCAGTGCCCCTCCTGGGA...CAGCTGGGACTGCTTGCCCTGAAGATCCCTCCAGAGAGAAAATAAACTAGCTGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000006403.7 ENSMUST00000170304.9 ENSMUST00000216710.2 |
||
| CDS-3UTR GCA 90 bp | GGGTGGAGAAAGGTCTCAGCTAGTTTATTTTCTCTCTGGAGGGATCTTCAGGGCCCCACAGGAACTTCTTaGTGTCCCGGATCTCCCGGG | + |
|
Preference number: 4 (lower is better) Translates to: GWRKVSASLFSLWRDLQGPTGTS*CPGSPG Trigger: CCCGGGAGATCCGGGACAGCAAGAAGTTCCTGTGGG...GCCCTGAAGATCCCTCCAGAGAGAAAATAAACTAGCTGAGACCTTTCTCCACCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000006403.7 ENSMUST00000170304.9 |
||
| CDS-3UTR CCA 90 bp | CAGCTAGTTTATTTTCTCTCTGGAGGGATCTTCAGGGCAAGCAGTCCCAGCTGCCTCCTTGGCGGCTCGTaGGGCTCAGCACTTCTTCAA | + |
|
Preference number: 4 (lower is better) Translates to: QLVYFLSGGIFRASSPSCLLGGS*GSALLQ Trigger: TTGAAGAAGTGCTGAGCCCCACGAGCCGCCAAGGAG...GCAGCTGGGACTGCTTGCCCTGAAGATCCCTCCAGAGAGAAAATAAACTAGCTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000006403.7 ENSMUST00000170304.9 ENSMUST00000214734.2 ENSMUST00000216710.2 |
||
| CDS-3UTR CCA 90 bp | GTCTCAGCTAGTTTATTTTCTCTCTGGAGGGATCTTCAGGGCAAGCAGTCCCAGCCATACTTCTCTCCTTaGCGGCTCGTGGGGCTCAGC | + |
|
Preference number: 4 (lower is better) Translates to: VSASLFSLWRDLQGKQSQPYFSP*RLVGLS Trigger: GCTGAGCCCCACGAGCCGCCAAGGAGAGAAGTATGG...CTGGGACTGCTTGCCCTGAAGATCCCTCCAGAGAGAAAATAAACTAGCTGAGAC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000006403.7 ENSMUST00000170304.9 ENSMUST00000214734.2 ENSMUST00000216710.2 |
||
| CDS-3UTR TCA 90 bp | AGGTCTCAGCTAGTTTATTTTCTCTCTGGAGGGATCTTCAGGGCAAGCAGTCCCCTCTCCAGGAGGTGGTaGGTACTGGCTCCTCTCCTT | + |
|
Preference number: 4 (lower is better) Translates to: RSQLVYFLSGGIFRASSPLSRRW*VLAPLL Trigger: AAGGAGAGGAGCCAGTACTCACCACCTCCTGGAGAG...GGGACTGCTTGCCCTGAAGATCCCTCCAGAGAGAAAATAAACTAGCTGAGACCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000006403.7 ENSMUST00000170304.9 ENSMUST00000214734.2 |
||
| CDS-3UTR TCA 90 bp | GGAGAAAGGTCTCAGCTAGTTTATTTTCTCTCTGGAGGGATCTTCAGGGCAAGCTCGAAAGCCTTGCTCTaGGCCTGCAGCTGGCTCCTG | + |
|
Preference number: 4 (lower is better) Translates to: GERSQLVYFLSGGIFRASSKALL*ACSWLL Trigger: CAGGAGCCAGCTGCAGGCTCAGAGCAAGGCTTTCGA...GCTTGCCCTGAAGATCCCTCCAGAGAGAAAATAAACTAGCTGAGACCTTTCTCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000006403.7 ENSMUST00000170304.9 |
||
| CDS-3UTR GCA 90 bp | TCAGGGCAAGCAGTCCCAGCTGCTCAAGCTACAGGGAGAGAAGGTAGGTCGTGGGAATCGTATGCCTGCTaGTTCATCTTGGTAAGAACC | + |
|
Preference number: 4 (lower is better) Translates to: SGQAVPAAQATGREGRSWESYAC*FILVRT Trigger: GGTTCTTACCAAGATGAAGCAGCAGGCATACGATTC...CCACGACCTACCTTCTCTCCCTGTAGCTTGAGCAGCTGGGACTGCTTGCCCTGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000216710.2 |
||
| CDS-3UTR CCA 90 bp | AGGAGAACTCAGGGTTGCCAACCAGGGACCAAATGCCCAGATAGAGTGCCAGCCTCTCCTTCTCCAGCATaGTCACAGAGTGATTCAGGA | + |
|
Preference number: 4 (lower is better) Translates to: RRTQGCQPGTKCPDRVPASPSPA*SQSDSG Trigger: TCCTGAATCACTCTGTGACCATGCTGGAGAAGGAGA...GGCTGGCACTCTATCTGGGCATTTGGTCCCTGGTTGGCAACCCTGAGTTCTCCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000214734.2 ENSMUST00000216710.2 |
||
| CDS-3UTR CCA 90 bp | GGGTGGAGAAAGGTCTCAGCTAGTTTATTTTCTCTCTGGAGGGATCTTCAGGGCCTCCTTGGCGGCTCGTaGGGCTCAGCACTTCTTCAA | + |
|
Preference number: 4 (lower is better) Translates to: GWRKVSASLFSLWRDLQGLLGGS*GSALLQ Trigger: TTGAAGAAGTGCTGAGCCCCACGAGCCGCCAAGGAG...GCCCTGAAGATCCCTCCAGAGAGAAAATAAACTAGCTGAGACCTTTCTCCACCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000006403.7 ENSMUST00000170304.9 |
||
| CDS-3UTR CCA 90 bp | TCAGCTAGTTTATTTTCTCTCTGGAGGGATCTTCAGGGCAAGCAGTCCCAGCTGCTCCTTGGCGGCTCGTaGGGCTCAGCACTTCTTCAA | + |
|
Preference number: 4 (lower is better) Translates to: SASLFSLWRDLQGKQSQLLLGGS*GSALLQ Trigger: TTGAAGAAGTGCTGAGCCCCACGAGCCGCCAAGGAG...CAGCTGGGACTGCTTGCCCTGAAGATCCCTCCAGAGAGAAAATAAACTAGCTGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000006403.7 ENSMUST00000170304.9 ENSMUST00000214734.2 ENSMUST00000216710.2 |
||
| CDS-3UTR TCA 90 bp | AAGGTCTCAGCTAGTTTATTTTCTCTCTGGAGGGATCTTCAGGGCAAGCAGTCCCTCTCCAGGAGGTGGTaGGTACTGGCTCCTCTCCTT | + |
|
Preference number: 4 (lower is better) Translates to: KVSASLFSLWRDLQGKQSLSRRW*VLAPLL Trigger: AAGGAGAGGAGCCAGTACTCACCACCTCCTGGAGAG...GGACTGCTTGCCCTGAAGATCCCTCCAGAGAGAAAATAAACTAGCTGAGACCTT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000006403.7 ENSMUST00000170304.9 ENSMUST00000214734.2 |
||
| CDS-3UTR TCA 90 bp | TCTCAGCTAGTTTATTTTCTCTCTGGAGGGATCTTCAGGGCAAGCAGTCCCAGCATGAGGCTGTGGTTCTaGGTCCCACTCCTTCTCCCA | + |
|
Preference number: 4 (lower is better) Translates to: SQLVYFLSGGIFRASSPSMRLWF*VPLLLP Trigger: TGGGAGAAGGAGTGGGACTCAGAACCACAGCCTCAT...GCTGGGACTGCTTGCCCTGAAGATCCCTCCAGAGAGAAAATAAACTAGCTGAGA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000006403.7 ENSMUST00000170304.9 ENSMUST00000214734.2 |
||
| CDS-3UTR TCA 90 bp | CTAGTTTATTTTCTCTCTGGAGGGATCTTCAGGGCAAGCAGTCCCAGCTGCTCAATGAGGCTGTGGTTCTaGGTCCCACTCCTTCTCCCA | + |
|
Preference number: 4 (lower is better) Translates to: LVYFLSGGIFRASSPSCSMRLWF*VPLLLP Trigger: TGGGAGAAGGAGTGGGACTCAGAACCACAGCCTCAT...TGAGCAGCTGGGACTGCTTGCCCTGAAGATCCCTCCAGAGAGAAAATAAACTAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000214734.2 |
||
| CDS-3UTR TCA 90 bp | TCTTCAGGGCAAGCAGTCCCAGCTGCTCAAGCTACAGGGAGAGAAGGTAGGTCGCATCGCAAGAGCTTCTaGGAGTCAGGAATTATCATG | + |
|
Preference number: 4 (lower is better) Translates to: SSGQAVPAAQATGREGRSHRKSF*ESGIIM Trigger: CATGATAATTCCTGACTCTCAGAAGCTCTTGCGATG...CGACCTACCTTCTCTCCCTGTAGCTTGAGCAGCTGGGACTGCTTGCCCTGAAGA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000214734.2 |
||
| CDS-3UTR TCA 90 bp | AGAAAGGTCTCAGCTAGTTTATTTTCTCTCTGGAGGGATCTTCAGGGCAAGCAGCCTGCAGCTGGCTCCTaGGAGACTCCAGTTCGCATC | + |
|
Preference number: 4 (lower is better) Translates to: RKVSASLFSLWRDLQGKQPAAGS*ETPVRI Trigger: GATGCGAACTGGAGTCTCTCAGGAGCCAGCTGCAGG...CTGCTTGCCCTGAAGATCCCTCCAGAGAGAAAATAAACTAGCTGAGACCTTTCT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000006403.7 ENSMUST00000170304.9 ENSMUST00000214734.2 |
||
| CDS-3UTR TCA 90 bp | TTTCTCTCTGGAGGGATCTTCAGGGCAAGCAGTCCCAGCTGCTCAAGCTACAGGGGAGTTTCTGATAGATaGAAGTCACCTCTTCCCGCA | + |
|
Preference number: 4 (lower is better) Translates to: FLSGGIFRASSPSCSSYRGVSDR*KSPLPA Trigger: TGCGGGAAGAGGTGACTTTCATCTATCAGAAACTCC...CCTGTAGCTTGAGCAGCTGGGACTGCTTGCCCTGAAGATCCCTCCAGAGAGAAA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000216710.2 |
||
| CDS-3UTR TCA 90 bp | GAAAGGTCTCAGCTAGTTTATTTTCTCTCTGGAGGGATCTTCAGGGCAAGCAGTTCCCAGGAGGGGCACTaGGAGCTCTTGCACTGGTGT | + |
|
Preference number: 4 (lower is better) Translates to: ERSQLVYFLSGGIFRASSSQEGH*ELLHWC Trigger: ACACCAGTGCAAGAGCTCTCAGTGCCCCTCCTGGGA...ACTGCTTGCCCTGAAGATCCCTCCAGAGAGAAAATAAACTAGCTGAGACCTTTC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000006403.7 ENSMUST00000170304.9 |
||
| CDS-3UTR GCA 90 bp | TGGAGAAAGGTCTCAGCTAGTTTATTTTCTCTCTGGAGGGATCTTCAGGGCAAGCCCACAGGAACTTCTTaGTGTCCCGGATCTCCCGGG | + |
|
Preference number: 4 (lower is better) Translates to: WRKVSASLFSLWRDLQGKPTGTS*CPGSPG Trigger: CCCGGGAGATCCGGGACAGCAAGAAGTTCCTGTGGG...CTTGCCCTGAAGATCCCTCCAGAGAGAAAATAAACTAGCTGAGACCTTTCTCCA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000006403.7 ENSMUST00000170304.9 |
||
| CDS-3UTR GCA 90 bp | TCAGCTAGTTTATTTTCTCTCTGGAGGGATCTTCAGGGCAAGCAGTCCCAGCTGGGCACTGAGAGCTCTTaGACTGGTGTCCTTTCTGGC | + |
|
Preference number: 4 (lower is better) Translates to: SASLFSLWRDLQGKQSQLGTESS*TGVLSG Trigger: GCCAGAAAGGACACCAGTGCAAGAGCTCTCAGTGCC...CAGCTGGGACTGCTTGCCCTGAAGATCCCTCCAGAGAGAAAATAAACTAGCTGA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000006403.7 ENSMUST00000170304.9 ENSMUST00000216710.2 |
||
| CDS-3UTR CCA 90 bp | CAGCTAGTTTATTTTCTCTCTGGAGGGATCTTCAGGGCAAGCAGTCCCAGCTGCGCTCCAGGGACTTCTTaGCTACACAGTGGTTCCTCT | + |
|
Preference number: 4 (lower is better) Translates to: QLVYFLSGGIFRASSPSCAPGTS*LHSGSS Trigger: AGAGGAACCACTGTGTAGCCAAGAAGTCCCTGGAGC...GCAGCTGGGACTGCTTGCCCTGAAGATCCCTCCAGAGAGAAAATAAACTAGCTG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000006403.7 ENSMUST00000170304.9 ENSMUST00000214734.2 |
||
| CDS-3UTR CCA 90 bp | AAGCAGTCCCAGCTGCTCAAGCTACAGGGAGAGAAGGTAGGTCGTGGTCTGGTTTCTCCTTCTCCAGCATaGTCACAGAGTGATTCAGGA | + |
|
Preference number: 4 (lower is better) Translates to: KQSQLLKLQGEKVGRGLVSPSPA*SQSDSG Trigger: TCCTGAATCACTCTGTGACCATGCTGGAGAAGGAGA...AACCAGACCACGACCTACCTTCTCTCCCTGTAGCTTGAGCAGCTGGGACTGCTT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000214734.2 ENSMUST00000216710.2 |
||
| CDS-3UTR CCA 90 bp | TGGAGAAAGGTCTCAGCTAGTTTATTTTCTCTCTGGAGGGATCTTCAGGGCAAGCACTGGTGTCCTTTCTaGCCTCTGAGGCTGGAGGCC | + |
|
Preference number: 4 (lower is better) Translates to: WRKVSASLFSLWRDLQGKHWCPF*PLRLEA Trigger: GGCCTCCAGCCTCAGAGGCCAGAAAGGACACCAGTG...CTTGCCCTGAAGATCCCTCCAGAGAGAAAATAAACTAGCTGAGACCTTTCTCCA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000006403.7 ENSMUST00000170304.9 |
||
| CDS-3UTR CCA 90 bp | GAAAGGTCTCAGCTAGTTTATTTTCTCTCTGGAGGGATCTTCAGGGCAAGCAGTCACTGGTGTCCTTTCTaGCCTCTGAGGCTGGAGGCC | + |
|
Preference number: 4 (lower is better) Translates to: ERSQLVYFLSGGIFRASSHWCPF*PLRLEA Trigger: GGCCTCCAGCCTCAGAGGCCAGAAAGGACACCAGTG...ACTGCTTGCCCTGAAGATCCCTCCAGAGAGAAAATAAACTAGCTGAGACCTTTC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000006403.7 ENSMUST00000170304.9 |
||
| CDS-3UTR TCA 90 bp | CAGCTAGTTTATTTTCTCTCTGGAGGGATCTTCAGGGCAAGCAGTCCCAGCTGCAGCATGGTCACAGAGTaGTTCAGGAACTCGAAAGCC | + |
|
Preference number: 4 (lower is better) Translates to: QLVYFLSGGIFRASSPSCSMVTE*FRNSKA Trigger: GGCTTTCGAGTTCCTGAATCACTCTGTGACCATGCT...GCAGCTGGGACTGCTTGCCCTGAAGATCCCTCCAGAGAGAAAATAAACTAGCTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000006403.7 ENSMUST00000170304.9 ENSMUST00000214734.2 ENSMUST00000216710.2 |
||
| CDS-3UTR GCA 90 bp | GGTGGAGAAAGGTCTCAGCTAGTTTATTTTCTCTCTGGAGGGATCTTCAGGGCAGGCACTGAGAGCTCTTaGACTGGTGTCCTTTCTGGC | + |
|
Preference number: 4 (lower is better) Translates to: GGERSQLVYFLSGGIFRAGTESS*TGVLSG Trigger: GCCAGAAAGGACACCAGTGCAAGAGCTCTCAGTGCC...TGCCCTGAAGATCCCTCCAGAGAGAAAATAAACTAGCTGAGACCTTTCTCCACC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000006403.7 ENSMUST00000170304.9 |
||
| CDS-3UTR CCA 90 bp | GGGTGGAGAAAGGTCTCAGCTAGTTTATTTTCTCTCTGGAGGGATCTTCAGGGCGCTCCAGGGACTTCTTaGCTACACAGTGGTTCCTCT | + |
|
Preference number: 4 (lower is better) Translates to: GWRKVSASLFSLWRDLQGAPGTS*LHSGSS Trigger: AGAGGAACCACTGTGTAGCCAAGAAGTCCCTGGAGC...GCCCTGAAGATCCCTCCAGAGAGAAAATAAACTAGCTGAGACCTTTCTCCACCC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000006403.7 ENSMUST00000170304.9 |
||
| CDS-3UTR TCA 90 bp | AGAAAGGTCTCAGCTAGTTTATTTTCTCTCTGGAGGGATCTTCAGGGCAAGCAGATGAGGCTGTGGTTCTaGGTCCCACTCCTTCTCCCA | + |
|
Preference number: 4 (lower is better) Translates to: RKVSASLFSLWRDLQGKQMRLWF*VPLLLP Trigger: TGGGAGAAGGAGTGGGACTCAGAACCACAGCCTCAT...CTGCTTGCCCTGAAGATCCCTCCAGAGAGAAAATAAACTAGCTGAGACCTTTCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000006403.7 ENSMUST00000170304.9 ENSMUST00000214734.2 |
||
| CDS-3UTR TCA 90 bp | TCTCAGCTAGTTTATTTTCTCTCTGGAGGGATCTTCAGGGCAAGCAGTCCCAGCAACTTTTACTTTGGCTaGGCTGGGCTCCAGGGACTT | + |
|
Preference number: 4 (lower is better) Translates to: SQLVYFLSGGIFRASSPSNFYFG*AGLQGL Trigger: AAGTCCCTGGAGCCCAGCTCAGCCAAAGTAAAAGTT...GCTGGGACTGCTTGCCCTGAAGATCCCTCCAGAGAGAAAATAAACTAGCTGAGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000006403.7 ENSMUST00000170304.9 ENSMUST00000214734.2 |
||
| CDS-3UTR TCA 90 bp | TCTCAGCTAGTTTATTTTCTCTCTGGAGGGATCTTCAGGGCAAGCAGTCCCAGCAGCATGGTCACAGAGTaGTTCAGGAACTCGAAAGCC | + |
|
Preference number: 4 (lower is better) Translates to: SQLVYFLSGGIFRASSPSSMVTE*FRNSKA Trigger: GGCTTTCGAGTTCCTGAATCACTCTGTGACCATGCT...GCTGGGACTGCTTGCCCTGAAGATCCCTCCAGAGAGAAAATAAACTAGCTGAGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000006403.7 ENSMUST00000170304.9 ENSMUST00000214734.2 ENSMUST00000216710.2 |
||
| CDS-3UTR TCA 90 bp | TCTCAGCTAGTTTATTTTCTCTCTGGAGGGATCTTCAGGGCAAGCAGTCCCAGCCAAGCTGCTGAATCTTaGTCTGCTGTAGGCAGCTCT | + |
|
Preference number: 4 (lower is better) Translates to: SQLVYFLSGGIFRASSPSQAAES*SAVGSS Trigger: AGAGCTGCCTACAGCAGATCAAGATTCAGCAGCTTG...GCTGGGACTGCTTGCCCTGAAGATCCCTCCAGAGAGAAAATAAACTAGCTGAGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000006403.7 ENSMUST00000170304.9 ENSMUST00000214734.2 ENSMUST00000216710.2 |
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| CDS-3UTR TCA 90 bp | AGGTCTCAGCTAGTTTATTTTCTCTCTGGAGGGATCTTCAGGGCAAGCAGTCCCCAAGCTGCTGAATCTTaGTCTGCTGTAGGCAGCTCT | + |
|
Preference number: 4 (lower is better) Translates to: RSQLVYFLSGGIFRASSPQAAES*SAVGSS Trigger: AGAGCTGCCTACAGCAGATCAAGATTCAGCAGCTTG...GGGACTGCTTGCCCTGAAGATCCCTCCAGAGAGAAAATAAACTAGCTGAGACCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000006403.7 ENSMUST00000170304.9 ENSMUST00000214734.2 ENSMUST00000216710.2 |
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| CDS-3UTR TCA 90 bp | AGGTCTCAGCTAGTTTATTTTCTCTCTGGAGGGATCTTCAGGGCAAGCAGTCCCTTGCGGCACTTCACCTaGGTTTTCTGCATCTTCTGG | + |
|
Preference number: 4 (lower is better) Translates to: RSQLVYFLSGGIFRASSPLRHFT*VFCIFW Trigger: CCAGAAGATGCAGAAAACTCAGGTGAAGTGCCGCAA...GGGACTGCTTGCCCTGAAGATCCCTCCAGAGAGAAAATAAACTAGCTGAGACCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000006403.7 ENSMUST00000170304.9 ENSMUST00000216710.2 |
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| CDS-3UTR TCA 90 bp | TCAGCTAGTTTATTTTCTCTCTGGAGGGATCTTCAGGGCAAGCAGTCCCAGCTGTTGCGGCACTTCACCTaGGTTTTCTGCATCTTCTGG | + |
|
Preference number: 4 (lower is better) Translates to: SASLFSLWRDLQGKQSQLLRHFT*VFCIFW Trigger: CCAGAAGATGCAGAAAACTCAGGTGAAGTGCCGCAA...CAGCTGGGACTGCTTGCCCTGAAGATCCCTCCAGAGAGAAAATAAACTAGCTGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000006403.7 ENSMUST00000170304.9 ENSMUST00000216710.2 |
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| CDS-3UTR GCA 90 bp | AAGGTCTCAGCTAGTTTATTTTCTCTCTGGAGGGATCTTCAGGGCAAGCAGTCCGGCCCCAGACTTCCCTaGTTGTTCAGAAGCAGTGTT | + |
|
Preference number: 4 (lower is better) Translates to: KVSASLFSLWRDLQGKQSGPRLP*LFRSSV Trigger: AACACTGCTTCTGAACAAGCAGGGAAGTCTGGGGCC...GGACTGCTTGCCCTGAAGATCCCTCCAGAGAGAAAATAAACTAGCTGAGACCTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000006403.7 ENSMUST00000170304.9 ENSMUST00000214734.2 |
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| CDS-3UTR GCA 90 bp | GGTGGAGAAAGGTCTCAGCTAGTTTATTTTCTCTCTGGAGGGATCTTCAGGGCAGGCCCCAGACTTCCCTaGTTGTTCAGAAGCAGTGTT | + |
|
Preference number: 4 (lower is better) Translates to: GGERSQLVYFLSGGIFRAGPRLP*LFRSSV Trigger: AACACTGCTTCTGAACAAGCAGGGAAGTCTGGGGCC...TGCCCTGAAGATCCCTCCAGAGAGAAAATAAACTAGCTGAGACCTTTCTCCACC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000006403.7 ENSMUST00000170304.9 |
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| CDS-3UTR GCA 90 bp | GAAAGGTCTCAGCTAGTTTATTTTCTCTCTGGAGGGATCTTCAGGGCAAGCAGTAGGCCCTGGGTCTGGTaGCCATTGACAAAGCAAGAC | + |
|
Preference number: 4 (lower is better) Translates to: ERSQLVYFLSGGIFRASSRPWVW*PLTKQD Trigger: GTCTTGCTTTGTCAATGGGCACCAGACCCAGGGCCT...ACTGCTTGCCCTGAAGATCCCTCCAGAGAGAAAATAAACTAGCTGAGACCTTTC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000006403.7 ENSMUST00000170304.9 |
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| CDS-3UTR CCA 90 bp | GGAGAAAGGTCTCAGCTAGTTTATTTTCTCTCTGGAGGGATCTTCAGGGCAAGCCAGGCTCCAAAACCCTaGACCAGTGGGTCATACAGT | + |
|
Preference number: 4 (lower is better) Translates to: GERSQLVYFLSGGIFRASQAPKP*TSGSYS Trigger: ACTGTATGACCCACTGGTCCAGGGTTTTGGAGCCTG...GCTTGCCCTGAAGATCCCTCCAGAGAGAAAATAAACTAGCTGAGACCTTTCTCC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000006403.7 ENSMUST00000170304.9 |
||
| CDS-3UTR CCA 90 bp | TCAGCTAGTTTATTTTCTCTCTGGAGGGATCTTCAGGGCAAGCAGTCCCAGCTGTCACCCAGCTCCTTCTaGAGGTCATCCTTACAGCAA | + |
|
Preference number: 4 (lower is better) Translates to: SASLFSLWRDLQGKQSQLSPSSF*RSSLQQ Trigger: TTGCTGTAAGGATGACCTCCAGAAGGAGCTGGGTGA...CAGCTGGGACTGCTTGCCCTGAAGATCCCTCCAGAGAGAAAATAAACTAGCTGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000006403.7 ENSMUST00000170304.9 ENSMUST00000216710.2 |
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| CDS-3UTR GCA 90 bp | GGGTGGAGAAAGGTCTCAGCTAGTTTATTTTCTCTCTGGAGGGATCTTCAGGGCCGAGTAACGGAGGTGTaGAGAGATGAGAAACACAGT | + |
|
Preference number: 4 (lower is better) Translates to: GWRKVSASLFSLWRDLQGRVTEV*RDEKHS Trigger: ACTGTGTTTCTCATCTCTGCACACCTCCGTTACTCG...GCCCTGAAGATCCCTCCAGAGAGAAAATAAACTAGCTGAGACCTTTCTCCACCC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000006403.7 ENSMUST00000170304.9 |
||
| CDS-3UTR GCA 90 bp | TCAGCTAGTTTATTTTCTCTCTGGAGGGATCTTCAGGGCAAGCAGTCCCAGCTGCGAGTAACGGAGGTGTaGAGAGATGAGAAACACAGT | + |
|
Preference number: 4 (lower is better) Translates to: SASLFSLWRDLQGKQSQLRVTEV*RDEKHS Trigger: ACTGTGTTTCTCATCTCTGCACACCTCCGTTACTCG...CAGCTGGGACTGCTTGCCCTGAAGATCCCTCCAGAGAGAAAATAAACTAGCTGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000006403.7 ENSMUST00000170304.9 ENSMUST00000214734.2 |
||
| CDS-3UTR GCA 90 bp | CAGCTAGTTTATTTTCTCTCTGGAGGGATCTTCAGGGCAAGCAGTCCCAGCTGCGAATCGTATGCCTGCTaGTTCATCTTGGTAAGAACC | + |
|
Preference number: 4 (lower is better) Translates to: QLVYFLSGGIFRASSPSCESYAC*FILVRT Trigger: GGTTCTTACCAAGATGAAGCAGCAGGCATACGATTC...GCAGCTGGGACTGCTTGCCCTGAAGATCCCTCCAGAGAGAAAATAAACTAGCTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000006403.7 ENSMUST00000170304.9 ENSMUST00000216710.2 |
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| CDS-3UTR CCA 90 bp | GAAAGGTCTCAGCTAGTTTATTTTCTCTCTGGAGGGATCTTCAGGGCAAGCAGTCAGGCTCCAAAACCCTaGACCAGTGGGTCATACAGT | + |
|
Preference number: 4 (lower is better) Translates to: ERSQLVYFLSGGIFRASSQAPKP*TSGSYS Trigger: ACTGTATGACCCACTGGTCCAGGGTTTTGGAGCCTG...ACTGCTTGCCCTGAAGATCCCTCCAGAGAGAAAATAAACTAGCTGAGACCTTTC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000006403.7 ENSMUST00000170304.9 ENSMUST00000214734.2 |
||
| CDS-3UTR CCA 90 bp | TCAGCTAGTTTATTTTCTCTCTGGAGGGATCTTCAGGGCAAGCAGTCCCAGCTGTCTCCTTCTCCAGCATaGTCACAGAGTGATTCAGGA | + |
|
Preference number: 4 (lower is better) Translates to: SASLFSLWRDLQGKQSQLSPSPA*SQSDSG Trigger: TCCTGAATCACTCTGTGACCATGCTGGAGAAGGAGA...CAGCTGGGACTGCTTGCCCTGAAGATCCCTCCAGAGAGAAAATAAACTAGCTGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000006403.7 ENSMUST00000170304.9 ENSMUST00000214734.2 ENSMUST00000216710.2 |
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| CDS-3UTR CCA 90 bp | GGAGAACTCAGGGTTGCCAACCAGGGACCAAATGCCCAGATAGAGTGCCAGCCTGTTTTCTGCATCTTCTaGATATTCAGGAGATTCTCT | + |
|
Preference number: 4 (lower is better) Translates to: GELRVANQGPNAQIECQPVFCIF*IFRRFS Trigger: AGAGAATCTCCTGAATATCCAGAAGATGCAGAAAAC...AGGCTGGCACTCTATCTGGGCATTTGGTCCCTGGTTGGCAACCCTGAGTTCTCC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000216710.2 |
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| CDS-3UTR CCA 90 bp | GGAGAAAGGTCTCAGCTAGTTTATTTTCTCTCTGGAGGGATCTTCAGGGCAAGCTCACCCAGCTCCTTCTaGAGGTCATCCTTACAGCAA | + |
|
Preference number: 4 (lower is better) Translates to: GERSQLVYFLSGGIFRASSPSSF*RSSLQQ Trigger: TTGCTGTAAGGATGACCTCCAGAAGGAGCTGGGTGA...GCTTGCCCTGAAGATCCCTCCAGAGAGAAAATAAACTAGCTGAGACCTTTCTCC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000006403.7 ENSMUST00000170304.9 |
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| CDS-3UTR TCA 90 bp | AGAAAGGTCTCAGCTAGTTTATTTTCTCTCTGGAGGGATCTTCAGGGCAAGCAGCAAGCTGCTGAATCTTaGTCTGCTGTAGGCAGCTCT | + |
|
Preference number: 4 (lower is better) Translates to: RKVSASLFSLWRDLQGKQQAAES*SAVGSS Trigger: AGAGCTGCCTACAGCAGATCAAGATTCAGCAGCTTG...CTGCTTGCCCTGAAGATCCCTCCAGAGAGAAAATAAACTAGCTGAGACCTTTCT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000006403.7 ENSMUST00000170304.9 ENSMUST00000214734.2 |
||
| CDS-3UTR TCA 90 bp | GGAGAAAGGTCTCAGCTAGTTTATTTTCTCTCTGGAGGGATCTTCAGGGCAAGCGGAGTTTCTGATAGATaGAAGTCACCTCTTCCCGCA | + |
|
Preference number: 4 (lower is better) Translates to: GERSQLVYFLSGGIFRASGVSDR*KSPLPA Trigger: TGCGGGAAGAGGTGACTTTCATCTATCAGAAACTCC...GCTTGCCCTGAAGATCCCTCCAGAGAGAAAATAAACTAGCTGAGACCTTTCTCC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000006403.7 ENSMUST00000170304.9 |
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| CDS-3UTR TCA 90 bp | CAGGGTGGAGAAAGGTCTCAGCTAGTTTATTTTCTCTCTGGAGGGATCTTCAGGATTCAGGAGATTCTCTaGGATCTCATCCTCCTGGTC | + |
|
Preference number: 4 (lower is better) Translates to: QGGERSQLVYFLSGGIFRIQEIL*DLILLV Trigger: GACCAGGAGGATGAGATCTCAGAGAATCTCCTGAAT...CCTGAAGATCCCTCCAGAGAGAAAATAAACTAGCTGAGACCTTTCTCCACCCTG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000006403.7 |
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| CDS-3UTR TCA 90 bp | GGTGGAGAAAGGTCTCAGCTAGTTTATTTTCTCTCTGGAGGGATCTTCAGGGCACATCGCAAGAGCTTCTaGGAGTCAGGAATTATCATG | + |
|
Preference number: 4 (lower is better) Translates to: GGERSQLVYFLSGGIFRAHRKSF*ESGIIM Trigger: CATGATAATTCCTGACTCTCAGAAGCTCTTGCGATG...TGCCCTGAAGATCCCTCCAGAGAGAAAATAAACTAGCTGAGACCTTTCTCCACC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000006403.7 ENSMUST00000170304.9 |
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| CDS-3UTR TCA 90 bp | GGAGAAAGGTCTCAGCTAGTTTATTTTCTCTCTGGAGGGATCTTCAGGGCAAGCCATCGCAAGAGCTTCTaGGAGTCAGGAATTATCATG | + |
|
Preference number: 4 (lower is better) Translates to: GERSQLVYFLSGGIFRASHRKSF*ESGIIM Trigger: CATGATAATTCCTGACTCTCAGAAGCTCTTGCGATG...GCTTGCCCTGAAGATCCCTCCAGAGAGAAAATAAACTAGCTGAGACCTTTCTCC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000006403.7 ENSMUST00000170304.9 |
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| CDS-3UTR TCA 90 bp | AGAAAGGTCTCAGCTAGTTTATTTTCTCTCTGGAGGGATCTTCAGGGCAAGCAGGGAGTTTCTGATAGATaGAAGTCACCTCTTCCCGCA | + |
|
Preference number: 4 (lower is better) Translates to: RKVSASLFSLWRDLQGKQGVSDR*KSPLPA Trigger: TGCGGGAAGAGGTGACTTTCATCTATCAGAAACTCC...CTGCTTGCCCTGAAGATCCCTCCAGAGAGAAAATAAACTAGCTGAGACCTTTCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000006403.7 ENSMUST00000170304.9 |
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| CDS-3UTR TCA 90 bp | AGAAAGGTCTCAGCTAGTTTATTTTCTCTCTGGAGGGATCTTCAGGGCAAGCAGATTCAGGAGATTCTCTaGGATCTCATCCTCCTGGTC | + |
|
Preference number: 4 (lower is better) Translates to: RKVSASLFSLWRDLQGKQIQEIL*DLILLV Trigger: GACCAGGAGGATGAGATCTCAGAGAATCTCCTGAAT...CTGCTTGCCCTGAAGATCCCTCCAGAGAGAAAATAAACTAGCTGAGACCTTTCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000006403.7 ENSMUST00000170304.9 |
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| CDS-3UTR GCA 90 bp | TGGAGAAAGGTCTCAGCTAGTTTATTTTCTCTCTGGAGGGATCTTCAGGGCAAGCGAGTAACGGAGGTGTaGAGAGATGAGAAACACAGT | + |
|
Preference number: 4 (lower is better) Translates to: WRKVSASLFSLWRDLQGKRVTEV*RDEKHS Trigger: ACTGTGTTTCTCATCTCTGCACACCTCCGTTACTCG...CTTGCCCTGAAGATCCCTCCAGAGAGAAAATAAACTAGCTGAGACCTTTCTCCA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000006403.7 ENSMUST00000170304.9 |
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| CDS-3UTR GCA 90 bp | GGAGAAAGGTCTCAGCTAGTTTATTTTCTCTCTGGAGGGATCTTCAGGGCAAGCGAATCGTATGCCTGCTaGTTCATCTTGGTAAGAACC | + |
|
Preference number: 4 (lower is better) Translates to: GERSQLVYFLSGGIFRASESYAC*FILVRT Trigger: GGTTCTTACCAAGATGAAGCAGCAGGCATACGATTC...GCTTGCCCTGAAGATCCCTCCAGAGAGAAAATAAACTAGCTGAGACCTTTCTCC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000006403.7 ENSMUST00000170304.9 |
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| CDS-3UTR CCA 90 bp | GAAAGGTCTCAGCTAGTTTATTTTCTCTCTGGAGGGATCTTCAGGGCAAGCAGTTCTCCTTCTCCAGCATaGTCACAGAGTGATTCAGGA | + |
|
Preference number: 4 (lower is better) Translates to: ERSQLVYFLSGGIFRASSSPSPA*SQSDSG Trigger: TCCTGAATCACTCTGTGACCATGCTGGAGAAGGAGA...ACTGCTTGCCCTGAAGATCCCTCCAGAGAGAAAATAAACTAGCTGAGACCTTTC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000006403.7 ENSMUST00000170304.9 ENSMUST00000214734.2 |
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| CDS-3UTR CCA 90 bp | GTCTCAGCTAGTTTATTTTCTCTCTGGAGGGATCTTCAGGGCAAGCAGTCCCAGGTTTTCTGCATCTTCTaGATATTCAGGAGATTCTCT | + |
|
Preference number: 4 (lower is better) Translates to: VSASLFSLWRDLQGKQSQVFCIF*IFRRFS Trigger: AGAGAATCTCCTGAATATCCAGAAGATGCAGAAAAC...CTGGGACTGCTTGCCCTGAAGATCCCTCCAGAGAGAAAATAAACTAGCTGAGAC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000006403.7 ENSMUST00000170304.9 ENSMUST00000216710.2 |
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| CDS-3UTR CCA 90 bp | GGGTGGAGAAAGGTCTCAGCTAGTTTATTTTCTCTCTGGAGGGATCTTCAGGGCGTTTTCTGCATCTTCTaGATATTCAGGAGATTCTCT | + |
|
Preference number: 4 (lower is better) Translates to: GWRKVSASLFSLWRDLQGVFCIF*IFRRFS Trigger: AGAGAATCTCCTGAATATCCAGAAGATGCAGAAAAC...GCCCTGAAGATCCCTCCAGAGAGAAAATAAACTAGCTGAGACCTTTCTCCACCC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000006403.7 ENSMUST00000170304.9 |
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| CDS GCA 90 bp | TCCCACAGGAACTTCTTGCTGTCCCGGATCTCCCGGGCCAACAGCTaGAGGCAGCGAGTGGTACGGGCCCGTTGCAGCTCCTCGCCTTCC | + |
|
Preference number: 5 (lower is better) Translates to: SHRNFLLSRISRANS*RQRVVRARCSSSPS Trigger: GGAAGGCGAGGAGCTGCAACGGGCCCGTACCACTCGCTGCCTGCAGCTGTTGGCCCGGGAGATCCGGGACAGCAAGAAGTTCCTGTGGGA 66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000006403.7 ENSMUST00000170304.9 ENSMUST00000216710.2 |
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| CDS CCA 90 bp | GTCCTCTGTCCCGGATCTCCCGGGCCAACAGCTGCAGGCAGCGAGTaGTACGGGCCCGTTGCAGCTCCTCGCCTTCCTTCAGTGTCTTCT | + |
|
Preference number: 5 (lower is better) Translates to: VLCPGSPGPTAAGSE*YGPVAAPRLPSVSS Trigger: AGAAGACACTGAAGGAAGGCGAGGAGCTGCAACGGGCCCGTACCACTCGCTGCCTGCAGCTGTTGGCCCGGGAGATCCGGGACAGAGGAC 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000214734.2 |
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| CDS CCA 90 bp | TCTTGCTGTCCCGGATCTCCCGGGCCAACAGCTGCAGGCAGCGAGTaGTACGGGCCCGTTGCAGCTCCTCGCCTTCCTTCAGTGTCTTCT | + |
|
Preference number: 5 (lower is better) Translates to: SCCPGSPGPTAAGSE*YGPVAAPRLPSVSS Trigger: AGAAGACACTGAAGGAAGGCGAGGAGCTGCAACGGGCCCGTACCACTCGCTGCCTGCAGCTGTTGGCCCGGGAGATCCGGGACAGCAAGA 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000006403.7 ENSMUST00000170304.9 ENSMUST00000216710.2 |
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| CDS-3UTR CAA 90 bp | CGTTGCCTTCTGTGGGCACCCCCTCGGCTTCTGGCCATGAATCGTATGCCTGCTCAACCCCTGCAGGCCTaGAGCCAGGGCCCCATACAG | + |
|
Preference number: 5 (lower is better) Translates to: RCLLWAPPRLLAMNRMPAQPLQA*SQGPIQ Trigger: CTGTATGGGGCCCTGGCTCAAGGCCTGCAGGGGTTG...AGCAGGCATACGATTCATGGCCAGAAGCCGAGGGGGTGCCCACAGAAGGCAACG 63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000214734.2 |
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| CDS-3UTR CAA 90 bp | TCAGGGCAAGCAGTCCCAGCTGCTCAAGCTACAGGGAGAGAAGGTAGGTCGTGGGCCATACTTCTCTCCTaGGCGGCTCGTGGGGCTCAG | + |
|
Preference number: 5 (lower is better) Translates to: SGQAVPAAQATGREGRSWAILLS*AARGAQ Trigger: CTGAGCCCCACGAGCCGCCAAGGAGAGAAGTATGGC...CCACGACCTACCTTCTCTCCCTGTAGCTTGAGCAGCTGGGACTGCTTGCCCTGA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000214734.2 ENSMUST00000216710.2 |
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| CDS-3UTR CAA 90 bp | TCTTCAGGGCAAGCAGTCCCAGCTGCTCAAGCTACAGGGAGAGAAGGTAGGTCGCAACCCCTGCAGGCCTaGAGCCAGGGCCCCATACAG | + |
|
Preference number: 5 (lower is better) Translates to: SSGQAVPAAQATGREGRSQPLQA*SQGPIQ Trigger: CTGTATGGGGCCCTGGCTCAAGGCCTGCAGGGGTTG...CGACCTACCTTCTCTCCCTGTAGCTTGAGCAGCTGGGACTGCTTGCCCTGAAGA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000214734.2 ENSMUST00000216710.2 |
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| CDS TCA 90 bp | AGCGGGAGGGTAGGATCCACTCTTGCTGAAAGGTCTCTCCCAGTCTaGATCGGAGTCCCAGGAGGGGCACTGAGAGCTCTTGCACTGGTG | + |
|
Preference number: 5 (lower is better) Translates to: SGRVGSTLAERSLPV*IGVPGGALRALALV Trigger: CACCAGTGCAAGAGCTCTCAGTGCCCCTCCTGGGACTCCGATTCAGACTGGGAGAGACCTTTCAGCAAGAGTGGATCCTACCCTCCCGCT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000006403.7 ENSMUST00000170304.9 |
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| CDS-3UTR CAA 90 bp | GGATCTTCAGGGCAAGCAGTCCCAGCTGCTCAAGCTACAGGGAGAGAAGGTAGGTCCTTACAGCAACCGTaGCCTTCTGTGGGCACCCCC | + |
|
Preference number: 5 (lower is better) Translates to: GSSGQAVPAAQATGREGRSLQQP*PSVGTP Trigger: GGGGGTGCCCACAGAAGGCAACGGTTGCTGTAAGGA...CCTACCTTCTCTCCCTGTAGCTTGAGCAGCTGGGACTGCTTGCCCTGAAGATCC 59% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000216710.2 |
||
| CDS-3UTR CAA 90 bp | GCAGTCCCAGCTGCTCAAGCTACAGGGAGAGAAGGTAGGTCGTGGTCTGGTTTGATACAGTCCAAAGCCTaGTCTGAGGAGGGCCCAGGC | + |
|
Preference number: 5 (lower is better) Translates to: AVPAAQATGREGRSWSGLIQSKA*SEEGPG Trigger: GCCTGGGCCCTCCTCAGACAAGGCTTTGGACTGTAT...CAAACCAGACCACGACCTACCTTCTCTCCCTGTAGCTTGAGCAGCTGGGACTGC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000214734.2 |
||
| CDS-3UTR CAA 90 bp | CAGCTAGTTTATTTTCTCTCTGGAGGGATCTTCAGGGCAAGCAGTCCCAGCTGCCAACCCCTGCAGGCCTaGAGCCAGGGCCCCATACAG | + |
|
Preference number: 5 (lower is better) Translates to: QLVYFLSGGIFRASSPSCQPLQA*SQGPIQ Trigger: CTGTATGGGGCCCTGGCTCAAGGCCTGCAGGGGTTG...GCAGCTGGGACTGCTTGCCCTGAAGATCCCTCCAGAGAGAAAATAAACTAGCTG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 4 transcripts: ENSMUST00000006403.7 ENSMUST00000170304.9 ENSMUST00000214734.2 ENSMUST00000216710.2 |
||
| CDS-3UTR CAA 90 bp | CAGCTAGTTTATTTTCTCTCTGGAGGGATCTTCAGGGCAAGCAGTCCCAGCTGCGCCATACTTCTCTCCTaGGCGGCTCGTGGGGCTCAG | + |
|
Preference number: 5 (lower is better) Translates to: QLVYFLSGGIFRASSPSCAILLS*AARGAQ Trigger: CTGAGCCCCACGAGCCGCCAAGGAGAGAAGTATGGC...GCAGCTGGGACTGCTTGCCCTGAAGATCCCTCCAGAGAGAAAATAAACTAGCTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000006403.7 ENSMUST00000170304.9 ENSMUST00000214734.2 ENSMUST00000216710.2 |
||
| CDS-3UTR CAA 90 bp | GTCTCAGCTAGTTTATTTTCTCTCTGGAGGGATCTTCAGGGCAAGCAGTCCCAGCAACCCCTGCAGGCCTaGAGCCAGGGCCCCATACAG | + |
|
Preference number: 5 (lower is better) Translates to: VSASLFSLWRDLQGKQSQQPLQA*SQGPIQ Trigger: CTGTATGGGGCCCTGGCTCAAGGCCTGCAGGGGTTG...CTGGGACTGCTTGCCCTGAAGATCCCTCCAGAGAGAAAATAAACTAGCTGAGAC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 4 transcripts: ENSMUST00000006403.7 ENSMUST00000170304.9 ENSMUST00000214734.2 ENSMUST00000216710.2 |
||
| CDS CCA 90 bp | TCAGAAGCAGTGTTCACGATCTCAGGCTCCAAAACCCTGGACCAGTaGGTCATACAGTCCAAAGCCTTGTCTGAGGAGGGCCCAGGCTCT | + |
|
Preference number: 5 (lower is better) Translates to: SEAVFTISGSKTLDQ*VIQSKALSEEGPGS Trigger: AGAGCCTGGGCCCTCCTCAGACAAGGCTTTGGACTGTATGACCCACTGGTCCAGGGTTTTGGAGCCTGAGATCGTGAACACTGCTTCTGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000006403.7 ENSMUST00000170304.9 ENSMUST00000214734.2 |
||
| CDS-3UTR CAA 90 bp | CTAGTTTATTTTCTCTCTGGAGGGATCTTCAGGGCAAGCAGTCCCAGCTGCTCAGCCATACTTCTCTCCTaGGCGGCTCGTGGGGCTCAG | + |
|
Preference number: 5 (lower is better) Translates to: LVYFLSGGIFRASSPSCSAILLS*AARGAQ Trigger: CTGAGCCCCACGAGCCGCCAAGGAGAGAAGTATGGC...TGAGCAGCTGGGACTGCTTGCCCTGAAGATCCCTCCAGAGAGAAAATAAACTAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000214734.2 ENSMUST00000216710.2 |
||
| CDS-3UTR CAA 90 bp | TCTCAGCTAGTTTATTTTCTCTCTGGAGGGATCTTCAGGGCAAGCAGTCCCAGCTCCTTACAGCAACCGTaGCCTTCTGTGGGCACCCCC | + |
|
Preference number: 5 (lower is better) Translates to: SQLVYFLSGGIFRASSPSSLQQP*PSVGTP Trigger: GGGGGTGCCCACAGAAGGCAACGGTTGCTGTAAGGA...GCTGGGACTGCTTGCCCTGAAGATCCCTCCAGAGAGAAAATAAACTAGCTGAGA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000006403.7 ENSMUST00000170304.9 ENSMUST00000216710.2 |
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| CDS TCA 90 bp | TTAGCAGCCCAAGATGTGATGGCGAGTAACGGAGGTGTGCAGAGATaGGAAACACAGTCGTCAGAGTCCCGGGATAGGCCAGCCAAAAGA | + |
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Preference number: 5 (lower is better) Translates to: LAAQDVMASNGGVQR*ETQSSESRDRPAKR Trigger: TCTTTTGGCTGGCCTATCCCGGGACTCTGACGACTGTGTTTCTCATCTCTGCACACCTCCGTTACTCGCCATCACATCTTGGGCTGCTAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000006403.7 ENSMUST00000170304.9 ENSMUST00000214734.2 |
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| CDS-3UTR CAA 90 bp | AGGTCTCAGCTAGTTTATTTTCTCTCTGGAGGGATCTTCAGGGCAAGCAGTCCCATACAGTCCAAAGCCTaGTCTGAGGAGGGCCCAGGC | + |
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Preference number: 5 (lower is better) Translates to: RSQLVYFLSGGIFRASSPIQSKA*SEEGPG Trigger: GCCTGGGCCCTCCTCAGACAAGGCTTTGGACTGTAT...GGGACTGCTTGCCCTGAAGATCCCTCCAGAGAGAAAATAAACTAGCTGAGACCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000006403.7 ENSMUST00000170304.9 ENSMUST00000214734.2 |
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| CDS-3UTR CAA 90 bp | TGGAGAAAGGTCTCAGCTAGTTTATTTTCTCTCTGGAGGGATCTTCAGGGCAAGGCCATACTTCTCTCCTaGGCGGCTCGTGGGGCTCAG | + |
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Preference number: 5 (lower is better) Translates to: WRKVSASLFSLWRDLQGKAILLS*AARGAQ Trigger: CTGAGCCCCACGAGCCGCCAAGGAGAGAAGTATGGC...CTTGCCCTGAAGATCCCTCCAGAGAGAAAATAAACTAGCTGAGACCTTTCTCCA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000006403.7 ENSMUST00000170304.9 |
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| CDS-3UTR CAA 90 bp | GGTGGAGAAAGGTCTCAGCTAGTTTATTTTCTCTCTGGAGGGATCTTCAGGGCATCCTTACAGCAACCGTaGCCTTCTGTGGGCACCCCC | + |
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Preference number: 5 (lower is better) Translates to: GGERSQLVYFLSGGIFRASLQQP*PSVGTP Trigger: GGGGGTGCCCACAGAAGGCAACGGTTGCTGTAAGGA...TGCCCTGAAGATCCCTCCAGAGAGAAAATAAACTAGCTGAGACCTTTCTCCACC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000006403.7 ENSMUST00000170304.9 |
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| CDS-3UTR CAA 90 bp | GCTGCTCAAGCTACAGGGAGAGAAGGTAGGTCGTGGTCTGGTTTGAACCAGGAGTGGGTCTGGTGCCCATaGACAAAGCAAGACAGTCAA | + |
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Preference number: 5 (lower is better) Translates to: AAQATGREGRSWSGLNQEWVWCP*TKQDSQ Trigger: TTGACTGTCTTGCTTTGTCAATGGGCACCAGACCCA...CTCCTGGTTCAAACCAGACCACGACCTACCTTCTCTCCCTGTAGCTTGAGCAGC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000216710.2 |
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| CDS CCA 90 bp | TCACAAGGTCCTGGTCATGATAATGGTCCTTGTTCACGTCTGAGCTaGAACAGGGTGTACCCTCATGAGGCTGTGGTTCTGAGTCCCACT | + |
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Preference number: 5 (lower is better) Translates to: SQGPGHDNGPCSRLS*NRVYPHEAVVLSPT Trigger: AGTGGGACTCAGAACCACAGCCTCATGAGGGTACACCCTGTTCCAGCTCAGACGTGAACAAGGACCATTATCATGACCAGGACCTTGTGA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000006403.7 ENSMUST00000170304.9 ENSMUST00000214734.2 |
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| CDS-3UTR CAA 90 bp | GGAGAAAGGTCTCAGCTAGTTTATTTTCTCTCTGGAGGGATCTTCAGGGCAAGCATACAGTCCAAAGCCTaGTCTGAGGAGGGCCCAGGC | + |
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Preference number: 5 (lower is better) Translates to: GERSQLVYFLSGGIFRASIQSKA*SEEGPG Trigger: GCCTGGGCCCTCCTCAGACAAGGCTTTGGACTGTAT...GCTTGCCCTGAAGATCCCTCCAGAGAGAAAATAAACTAGCTGAGACCTTTCTCC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000006403.7 ENSMUST00000170304.9 |
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| CDS-3UTR CAA 90 bp | CAGCTAGTTTATTTTCTCTCTGGAGGGATCTTCAGGGCAAGCAGTCCCAGCTGCCCCAGACTTCCCTGCTaGTTCAGAAGCAGTGTTCAC | + |
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Preference number: 5 (lower is better) Translates to: QLVYFLSGGIFRASSPSCPRLPC*FRSSVH Trigger: GTGAACACTGCTTCTGAACAAGCAGGGAAGTCTGGG...GCAGCTGGGACTGCTTGCCCTGAAGATCCCTCCAGAGAGAAAATAAACTAGCTG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000006403.7 ENSMUST00000170304.9 ENSMUST00000214734.2 |
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| CDS-3UTR CAA 90 bp | CCCTGGGTCTGGTGCCCATTGACAAAGCAAGACAGTCAATGGAGCTCTGCAGACTTCTTAACTTTTACTTaGGCTGAGCTGGGCTCCAGG | + |
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Preference number: 5 (lower is better) Translates to: PWVWCPLTKQDSQWSSADFLTFT*AELGSR Trigger: CCTGGAGCCCAGCTCAGCCAAAGTAAAAGTTAAGAA...GTCTGCAGAGCTCCATTGACTGTCTTGCTTTGTCAATGGGCACCAGACCCAGGG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000214734.2 |
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| CDS-3UTR CAA 90 bp | GGTGGAGAAAGGTCTCAGCTAGTTTATTTTCTCTCTGGAGGGATCTTCAGGGCACCCAGACTTCCCTGCTaGTTCAGAAGCAGTGTTCAC | + |
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Preference number: 5 (lower is better) Translates to: GGERSQLVYFLSGGIFRAPRLPC*FRSSVH Trigger: GTGAACACTGCTTCTGAACAAGCAGGGAAGTCTGGG...TGCCCTGAAGATCCCTCCAGAGAGAAAATAAACTAGCTGAGACCTTTCTCCACC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000006403.7 ENSMUST00000170304.9 |
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| CDS-3UTR CAA 90 bp | GGGTGGAGAAAGGTCTCAGCTAGTTTATTTTCTCTCTGGAGGGATCTTCAGGGCTGGGTCTGGTGCCCATaGACAAAGCAAGACAGTCAA | + |
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Preference number: 5 (lower is better) Translates to: GWRKVSASLFSLWRDLQGWVWCP*TKQDSQ Trigger: TTGACTGTCTTGCTTTGTCAATGGGCACCAGACCCA...GCCCTGAAGATCCCTCCAGAGAGAAAATAAACTAGCTGAGACCTTTCTCCACCC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000006403.7 ENSMUST00000170304.9 |
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| CDS-3UTR CAA 90 bp | TCTCAGCTAGTTTATTTTCTCTCTGGAGGGATCTTCAGGGCAAGCAGTCCCAGCTTCTTAACTTTTACTTaGGCTGAGCTGGGCTCCAGG | + |
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Preference number: 5 (lower is better) Translates to: SQLVYFLSGGIFRASSPSFLTFT*AELGSR Trigger: CCTGGAGCCCAGCTCAGCCAAAGTAAAAGTTAAGAA...GCTGGGACTGCTTGCCCTGAAGATCCCTCCAGAGAGAAAATAAACTAGCTGAGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000006403.7 ENSMUST00000170304.9 ENSMUST00000214734.2 |
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| CDS-3UTR CAA 90 bp | AGGTCTCAGCTAGTTTATTTTCTCTCTGGAGGGATCTTCAGGGCAAGCAGTCCCTTCTTAACTTTTACTTaGGCTGAGCTGGGCTCCAGG | + |
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Preference number: 5 (lower is better) Translates to: RSQLVYFLSGGIFRASSPFLTFT*AELGSR Trigger: CCTGGAGCCCAGCTCAGCCAAAGTAAAAGTTAAGAA...GGGACTGCTTGCCCTGAAGATCCCTCCAGAGAGAAAATAAACTAGCTGAGACCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000006403.7 ENSMUST00000170304.9 ENSMUST00000214734.2 |
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| CDS-3UTR CAA 90 bp | AGAAAGGTCTCAGCTAGTTTATTTTCTCTCTGGAGGGATCTTCAGGGCAAGCAGTGGGTCTGGTGCCCATaGACAAAGCAAGACAGTCAA | + |
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Preference number: 5 (lower is better) Translates to: RKVSASLFSLWRDLQGKQWVWCP*TKQDSQ Trigger: TTGACTGTCTTGCTTTGTCAATGGGCACCAGACCCA...CTGCTTGCCCTGAAGATCCCTCCAGAGAGAAAATAAACTAGCTGAGACCTTTCT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000006403.7 ENSMUST00000170304.9 |
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| CDS GCA 72 bp | CCTGGTCCTCTGTCCCGGATCTCCCGGGCCAACAGCTaGAGGCAGCGAGTGGTACGGGCCCGTTGCAGCTCC | + |
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Preference number: 6 (lower is better) Translates to: PGPLSRISRANS*RQRVVRARCSS Trigger: GGAGCTGCAACGGGCCCGTACCACTCGCTGCCTGCAGCTGTTGGCCCGGGAGATCCGGGACAGAGGACCAGG 69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000214734.2 |
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| CDS CCA 72 bp | CCCGGATCTCCCGGGCCAACAGCTGCAGGCAGCGAGTaGTACGGGCCCGTTGCAGCTCCTCGCCTTCCTTCA | + |
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Preference number: 6 (lower is better) Translates to: PGSPGPTAAGSE*YGPVAAPRLPS Trigger: TGAAGGAAGGCGAGGAGCTGCAACGGGCCCGTACCACTCGCTGCCTGCAGCTGTTGGCCCGGGAGATCCGGG 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000006403.7 ENSMUST00000170304.9 ENSMUST00000214734.2 ENSMUST00000216710.2 |
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| CDS GCA 72 bp | AACTTCTTGCTGTCCCGGATCTCCCGGGCCAACAGCTaGAGGCAGCGAGTGGTACGGGCCCGTTGCAGCTCC | + |
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Preference number: 6 (lower is better) Translates to: NFLLSRISRANS*RQRVVRARCSS Trigger: GGAGCTGCAACGGGCCCGTACCACTCGCTGCCTGCAGCTGTTGGCCCGGGAGATCCGGGACAGCAAGAAGTT 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000006403.7 ENSMUST00000170304.9 ENSMUST00000216710.2 |
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| CDS GCA 72 bp | GGCCTTGAGCCAGGGCCCCATACAGCTCCTGCTCTGTaGTCCACTTACGGCCATACTTCTCTCCTTGGCGGC | + |
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Preference number: 6 (lower is better) Translates to: GLEPGPHTAPAL*STYGHTSLLGG Trigger: GCCGCCAAGGAGAGAAGTATGGCCGTAAGTGGAGCACAGAGCAGGAGCTGTATGGGGCCCTGGCTCAAGGCC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000006403.7 ENSMUST00000170304.9 ENSMUST00000214734.2 ENSMUST00000216710.2 |
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| CDS GCA 72 bp | GCCAACAGCTGCAGGCAGCGAGTGGTACGGGCCCGTTaGAGCTCCTCGCCTTCCTTCAGTGTCTTCTGCAAC | + |
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Preference number: 6 (lower is better) Translates to: ANSCRQRVVRAR*SSSPSFSVFCN Trigger: GTTGCAGAAGACACTGAAGGAAGGCGAGGAGCTGCAACGGGCCCGTACCACTCGCTGCCTGCAGCTGTTGGC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000006403.7 ENSMUST00000170304.9 ENSMUST00000214734.2 ENSMUST00000216710.2 |
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| CDS CAA 72 bp | GGCCAACAGCTGCAGGCAGCGAGTGGTACGGGCCCGTaGCAGCTCCTCGCCTTCCTTCAGTGTCTTCTGCAA | + |
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Preference number: 6 (lower is better) Translates to: GQQLQAASGTGP*QLLAFLQCLLQ Trigger: TTGCAGAAGACACTGAAGGAAGGCGAGGAGCTGCAACGGGCCCGTACCACTCGCTGCCTGCAGCTGTTGGCC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000006403.7 ENSMUST00000170304.9 ENSMUST00000214734.2 ENSMUST00000216710.2 |
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| CDS CAA 90 bp | TCAGGCTCCAAAACCCTGGACCAGTGGGTCATACAGTCCAAAGCCTaGTCTGAGGAGGGCCCAGGCTCTCCAGGAGGTGGTGAGTACTGG | + |
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Preference number: 6 (lower is better) Translates to: SGSKTLDQWVIQSKA*SEEGPGSPGGGEYW Trigger: CCAGTACTCACCACCTCCTGGAGAGCCTGGGCCCTCCTCAGACAAGGCTTTGGACTGTATGACCCACTGGTCCAGGGTTTTGGAGCCTGA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000006403.7 ENSMUST00000170304.9 ENSMUST00000214734.2 |
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| CDS CCA 72 bp | TGCTCTGTGCTCCACTTACGGCCATACTTCTCTCCTTaGCGGCTCGTGGGGCTCAGCACTTCTTCAAGCTGC | + |
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Preference number: 6 (lower is better) Translates to: CSVLHLRPYFSP*RLVGLSTSSSC Trigger: GCAGCTTGAAGAAGTGCTGAGCCCCACGAGCCGCCAAGGAGAGAAGTATGGCCGTAAGTGGAGCACAGAGCA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000006403.7 ENSMUST00000170304.9 ENSMUST00000214734.2 ENSMUST00000216710.2 |
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| CDS CAA 72 bp | CTGCTCTGTGCTCCACTTACGGCCATACTTCTCTCCTaGGCGGCTCGTGGGGCTCAGCACTTCTTCAAGCTG | + |
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Preference number: 6 (lower is better) Translates to: LLCAPLTAILLS*AARGAQHFFKL Trigger: CAGCTTGAAGAAGTGCTGAGCCCCACGAGCCGCCAAGGAGAGAAGTATGGCCGTAAGTGGAGCACAGAGCAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000006403.7 ENSMUST00000170304.9 ENSMUST00000214734.2 ENSMUST00000216710.2 |
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| CDS TCA 72 bp | ACTCGAAAGCCTTGCTCTGAGCCTGCAGCTGGCTCCTaGGAGACTCCAGTTCGCATCGCAAGAGCTTCTGAG | + |
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Preference number: 6 (lower is better) Translates to: TRKPCSEPAAGS*ETPVRIARASE Trigger: CTCAGAAGCTCTTGCGATGCGAACTGGAGTCTCTCAGGAGCCAGCTGCAGGCTCAGAGCAAGGCTTTCGAGT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000006403.7 ENSMUST00000170304.9 ENSMUST00000214734.2 ENSMUST00000216710.2 |
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| CDS CAA 72 bp | GTCCCACTCCTTCTCCCAGGCCCCAGACTTCCCTGCTaGTTCAGAAGCAGTGTTCACGATCTCAGGCTCCAA | + |
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Preference number: 6 (lower is better) Translates to: VPLLLPGPRLPC*FRSSVHDLRLQ Trigger: TTGGAGCCTGAGATCGTGAACACTGCTTCTGAACAAGCAGGGAAGTCTGGGGCCTGGGAGAAGGAGTGGGAC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000006403.7 ENSMUST00000170304.9 ENSMUST00000214734.2 |
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| CDS TCA 72 bp | TTGTTCACGTCTGAGCTGGAACAGGGTGTACCCTCATaGGGCTGTGGTTCTGAGTCCCACTCCTTCTCCCAG | + |
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Preference number: 6 (lower is better) Translates to: LFTSELEQGVPS*GCGSESHSFSQ Trigger: CTGGGAGAAGGAGTGGGACTCAGAACCACAGCCTCATGAGGGTACACCCTGTTCCAGCTCAGACGTGAACAA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000006403.7 ENSMUST00000170304.9 ENSMUST00000214734.2 |
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| CDS CCA 72 bp | GTGTTCACGATCTCAGGCTCCAAAACCCTGGACCAGTaGGTCATACAGTCCAAAGCCTTGTCTGAGGAGGGC | + |
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Preference number: 6 (lower is better) Translates to: VFTISGSKTLDQ*VIQSKALSEEG Trigger: GCCCTCCTCAGACAAGGCTTTGGACTGTATGACCCACTGGTCCAGGGTTTTGGAGCCTGAGATCGTGAACAC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000006403.7 ENSMUST00000170304.9 ENSMUST00000214734.2 |
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| CDS CAA 90 bp | ATACAGCTCCTGCTCTGTGCTCCACTTACGGCCATACTTCTCTCCTaGGCGGCTCGTGGGGCTCAGCACTTCTTCAAGCTGCTGAATCTT | + |
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Preference number: 6 (lower is better) Translates to: IQLLLCAPLTAILLS*AARGAQHFFKLLNL Trigger: AAGATTCAGCAGCTTGAAGAAGTGCTGAGCCCCACGAGCCGCCAAGGAGAGAAGTATGGCCGTAAGTGGAGCACAGAGCAGGAGCTGTAT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000006403.7 ENSMUST00000170304.9 ENSMUST00000214734.2 ENSMUST00000216710.2 |
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| CDS TCA 72 bp | CAAGATGTGATGGCGAGTAACGGAGGTGTGCAGAGATaGGAAACACAGTCGTCAGAGTCCCGGGATAGGCCA | + |
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Preference number: 6 (lower is better) Translates to: QDVMASNGGVQR*ETQSSESRDRP Trigger: TGGCCTATCCCGGGACTCTGACGACTGTGTTTCTCATCTCTGCACACCTCCGTTACTCGCCATCACATCTTG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000006403.7 ENSMUST00000170304.9 ENSMUST00000214734.2 |
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| CDS TCA 72 bp | TCGTGGGGCTCAGCACTTCTTCAAGCTGCTGAATCTTaGTCTGCTGTAGGCAGCTCTCCTTCTCCAGCATGG | + |
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Preference number: 6 (lower is better) Translates to: SWGSALLQAAES*SAVGSSPSPAW Trigger: CCATGCTGGAGAAGGAGAGCTGCCTACAGCAGATCAAGATTCAGCAGCTTGAAGAAGTGCTGAGCCCCACGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000006403.7 ENSMUST00000170304.9 ENSMUST00000214734.2 ENSMUST00000216710.2 |
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| CDS TCA 72 bp | AAGGTCCTGGTCATGATAATGGTCCTTGTTCACGTCTaGGCTGGAACAGGGTGTACCCTCATGAGGCTGTGG | + |
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Preference number: 6 (lower is better) Translates to: KVLVMIMVLVHV*AGTGCTLMRLW Trigger: CCACAGCCTCATGAGGGTACACCCTGTTCCAGCTCAGACGTGAACAAGGACCATTATCATGACCAGGACCTT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000006403.7 ENSMUST00000170304.9 ENSMUST00000214734.2 |
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| CDS CCA 72 bp | CAGAAGCAGTGTTCACGATCTCAGGCTCCAAAACCCTaGACCAGTGGGTCATACAGTCCAAAGCCTTGTCTG | + |
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Preference number: 6 (lower is better) Translates to: QKQCSRSQAPKP*TSGSYSPKPCL Trigger: CAGACAAGGCTTTGGACTGTATGACCCACTGGTCCAGGGTTTTGGAGCCTGAGATCGTGAACACTGCTTCTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000006403.7 ENSMUST00000170304.9 ENSMUST00000214734.2 |
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| CDS CCA 72 bp | CCTGGTCATGATAATGGTCCTTGTTCACGTCTGAGCTaGAACAGGGTGTACCCTCATGAGGCTGTGGTTCTG | + |
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Preference number: 6 (lower is better) Translates to: PGHDNGPCSRLS*NRVYPHEAVVL Trigger: CAGAACCACAGCCTCATGAGGGTACACCCTGTTCCAGCTCAGACGTGAACAAGGACCATTATCATGACCAGG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000006403.7 ENSMUST00000170304.9 ENSMUST00000214734.2 |
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| CDS TCA 72 bp | AGGAATTATCATGGTGTTCTTAACTTTTACTTTGGCTaGGCTGGGCTCCAGGGACTTCTTGGCTACACAGTG | + |
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Preference number: 6 (lower is better) Translates to: RNYHGVLNFYFG*AGLQGLLGYTV Trigger: CACTGTGTAGCCAAGAAGTCCCTGGAGCCCAGCTCAGCCAAAGTAAAAGTTAAGAACACCATGATAATTCCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000006403.7 ENSMUST00000170304.9 ENSMUST00000214734.2 |
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| CDS CAA 72 bp | GAGTCAGGAATTATCATGGTGTTCTTAACTTTTACTTaGGCTGAGCTGGGCTCCAGGGACTTCTTGGCTACA | + |
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Preference number: 6 (lower is better) Translates to: ESGIIMVFLTFT*AELGSRDFLAT Trigger: TGTAGCCAAGAAGTCCCTGGAGCCCAGCTCAGCCAAAGTAAAAGTTAAGAACACCATGATAATTCCTGACTC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000006403.7 ENSMUST00000170304.9 ENSMUST00000214734.2 |
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