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Pregenerated sensors for CCDC152 (Mus musculus)

Ensembl gene IDs: ENSMUSG00000091119

Ensembl transcript IDs: ENSMUST00000165386.2, ENSMUST00000226261.2, ENSMUST00000228405.2

Found 17 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR TCA 90 bp TATCTGTGCATCTTGTTCTCTTCATTTAATGCTGTACTGTTCTGCTaGGCTCTGAGGGACTATCTTGAGAGATGTAATGGAAGGAAAGCG +
Preference number: 1 (lower is better)
Translates to: YLCILFSSFNAVLFC*ALRDYLERCNGRKA
Trigger: CGCTTTCCTTCCATTACATCTCTCAAGATAGTCCCTCAGAGCTCAGCAGAACAGTACAGCATTAAATGAAGAGAACAAGATGCACAGATA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000226261.2
3UTR-3UTR TCA 90 bp CATCATTTTCTCTCTCAGAGTCCTAGCTTGAGTTGCACTGCATGTATCTGTGCAGCTGTACTGTTCTGCTaGGCTCTGAGGGACTATCTT +
Preference number: 2 (lower is better)
Translates to: HHFLSQSPSLSCTACICAAVLFC*ALRDYL
Trigger: AAGATAGTCCCTCAGAGCTCAGCAGAACAGTACAGC...TGCACAGATACATGCAGTGCAACTCAAGCTAGGACTCTGAGAGAGAAAATGATG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000226261.2
3UTR-3UTR CCA 90 bp TTTCTCTCTCAGAGTCCTAGCTTGAGTTGCACTGCATGTATCTGTGCATCTTGTGAGTACAGAATTAAGTaGCTACAGTACACACTTATC +
Preference number: 2 (lower is better)
Translates to: FLSQSPSLSCTACICASCEYRIK*LQYTLI
Trigger: GATAAGTGTGTACTGTAGCCACTTAATTCTGTACTC...ACAAGATGCACAGATACATGCAGTGCAACTCAAGCTAGGACTCTGAGAGAGAAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000226261.2
3UTR-3UTR CAA 90 bp TCTCAGAGTCCTAGCTTGAGTTGCACTGCATGTATCTGTGCATCTTGTTCTCTTAAGTGTGTGTCTTTATaGTTCAGCATGCTCACATTG +
Preference number: 3 (lower is better)
Translates to: SQSPSLSCTACICASCSLKCVSL*FSMLTL
Trigger: CAATGTGAGCATGCTGAACAATAAAGACACACACTT...AAGAGAACAAGATGCACAGATACATGCAGTGCAACTCAAGCTAGGACTCTGAGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000226261.2
3UTR GCA 72 bp ACTCATCATTTTCTCTCTCAGAGTCCTAGCTTGAGTTaGACTGCATGTATCTGTGCATCTTGTTCTCTTCAT +
Preference number: 3 (lower is better)
Translates to: THHFLSQSPSLS*TACICASCSLH
Trigger: ATGAAGAGAACAAGATGCACAGATACATGCAGTGCAACTCAAGCTAGGACTCTGAGAGAGAAAATGATGAGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000226261.2
3UTR TCA 72 bp ATCTTGTTCTCTTCATTTAATGCTGTACTGTTCTGCTaGGCTCTGAGGGACTATCTTGAGAGATGTAATGGA +
Preference number: 3 (lower is better)
Translates to: ILFSSFNAVLFC*ALRDYLERCNG
Trigger: TCCATTACATCTCTCAAGATAGTCCCTCAGAGCTCAGCAGAACAGTACAGCATTAAATGAAGAGAACAAGAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000226261.2
CDS-3UTR GCA 90 bp TTTCTCTCTCAGAGTCCTAGCTTGAGTTGCACTGCATGTATCTGTGCATCTTGTTCTCGGATAGTGTTCTaGAGACTTGCAATTTCTTTG +
Preference number: 4 (lower is better)
Translates to: FLSQSPSLSCTACICASCSRIVF*RLAISL
Trigger: CAAAGAAATTGCAAGTCTGCAGAACACTATCCGAGA...ACAAGATGCACAGATACATGCAGTGCAACTCAAGCTAGGACTCTGAGAGAGAAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000226261.2
CDS-3UTR TCA 90 bp TCTCAGAGTCCTAGCTTGAGTTGCACTGCATGTATCTGTGCATCTTGTTCTCTTGATTTTGATTTAGTCTaGGCTCTTGCTAGTTTAGTG +
Preference number: 4 (lower is better)
Translates to: SQSPSLSCTACICASCSLDFDLV*ALASLV
Trigger: CACTAAACTAGCAAGAGCTCAGACTAAATCAAAATC...AAGAGAACAAGATGCACAGATACATGCAGTGCAACTCAAGCTAGGACTCTGAGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000226261.2
CDS-3UTR GCA 90 bp TCTCAGAGTCCTAGCTTGAGTTGCACTGCATGTATCTGTGCATCTTGTTCTCTTAGTGTTCTGCAGACTTaGAATTTCTTTGCTCTTTTC +
Preference number: 4 (lower is better)
Translates to: SQSPSLSCTACICASCSLSVLQT*NFFALF
Trigger: GAAAAGAGCAAAGAAATTGCAAGTCTGCAGAACACT...AAGAGAACAAGATGCACAGATACATGCAGTGCAACTCAAGCTAGGACTCTGAGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000226261.2
CDS-3UTR TCA 90 bp TTTATGGCTAATACGACTAAGCAAGAATGGAGTACAGAATTAAGTGGCTACAGTTGCTTTTCCTTCTCCTaGGTCCTCAACTTTGCATTT +
Preference number: 4 (lower is better)
Translates to: FMANTTKQEWSTELSGYSCFSFS*VLNFAF
Trigger: AAATGCAAAGTTGAGGACTCAGGAGAAGGAAAAGCA...ACTGTAGCCACTTAATTCTGTACTCCATTCTTGCTTAGTCGTATTAGCCATAAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000226261.2
CDS-3UTR TCA 90 bp TTTATGGCTAATACGACTAAGCAAGAATGGAGTACAGAATTAAGTGGCTACAGTTTAGTCTTTTCCAGCTaGATATCCAGAAGGTTGTTC +
Preference number: 4 (lower is better)
Translates to: FMANTTKQEWSTELSGYSLVFSS*ISRRLF
Trigger: GAACAACCTTCTGGATATTCAGCTGGAAAAGACTAA...ACTGTAGCCACTTAATTCTGTACTCCATTCTTGCTTAGTCGTATTAGCCATAAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000226261.2
CDS-3UTR CAA 90 bp CATCATTTTCTCTCTCAGAGTCCTAGCTTGAGTTGCACTGCATGTATCTGTGCATCTGAGGATTTCATTTaGCTTTTCCTTCTCCTGAGT +
Preference number: 5 (lower is better)
Translates to: HHFLSQSPSLSCTACICASEDFI*LFLLLS
Trigger: ACTCAGGAGAAGGAAAAGCAAAATGAAATCCTCAGA...TGCACAGATACATGCAGTGCAACTCAAGCTAGGACTCTGAGAGAGAAAATGATG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000226261.2
CDS TCA 90 bp CTCTGCAGCAAAATAGTCGTGTCCGGATATGATTTTGATTTAGTCTaGGCTCTTGCTAGTTTAGTGTCAAATTCTAGATGCAGTCTGAGG +
Preference number: 5 (lower is better)
Translates to: LCSKIVVSGYDFDLV*ALASLVSNSRCSLR
Trigger: CCTCAGACTGCATCTAGAATTTGACACTAAACTAGCAAGAGCTCAGACTAAATCAAAATCATATCCGGACACGACTATTTTGCTGCAGAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000165386.2
ENSMUST00000226261.2
ENSMUST00000228405.2
CDS-3UTR CAA 90 bp TCTCAGAGTCCTAGCTTGAGTTGCACTGCATGTATCTGTGCATCTTGTTCTCTTCCTGAGTCCTCAACTTaGCATTTAACTCTGATATTT +
Preference number: 5 (lower is better)
Translates to: SQSPSLSCTACICASCSLPESST*HLTLIF
Trigger: AAATATCAGAGTTAAATGCAAAGTTGAGGACTCAGG...AAGAGAACAAGATGCACAGATACATGCAGTGCAACTCAAGCTAGGACTCTGAGA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000226261.2
CDS TCA 90 bp AATTCTAGATGCAGTCTGAGGATTTCATTTTGCTTTTCCTTCTCCTaGGTCCTCAACTTTGCATTTAACTCTGATATTTCCATCTCCTTC +
Preference number: 5 (lower is better)
Translates to: NSRCSLRISFCFSFS*VLNFAFNSDISISF
Trigger: GAAGGAGATGGAAATATCAGAGTTAAATGCAAAGTTGAGGACTCAGGAGAAGGAAAAGCAAAATGAAATCCTCAGACTGCATCTAGAATT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000165386.2
ENSMUST00000226261.2
ENSMUST00000228405.2
CDS CAA 72 bp TTTCATTTTGCTTTTCCTTCTCCTGAGTCCTCAACTTaGCATTTAACTCTGATATTTCCATCTCCTTCCTTG +
Preference number: 6 (lower is better)
Translates to: FHFAFPSPESST*HLTLIFPSPSL
Trigger: CAAGGAAGGAGATGGAAATATCAGAGTTAAATGCAAAGTTGAGGACTCAGGAGAAGGAAAAGCAAAATGAAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000165386.2
ENSMUST00000226261.2
ENSMUST00000228405.2
CDS TCA 72 bp AAAATAGTCGTGTCCGGATATGATTTTGATTTAGTCTaGGCTCTTGCTAGTTTAGTGTCAAATTCTAGATGC +
Preference number: 6 (lower is better)
Translates to: KIVVSGYDFDLV*ALASLVSNSRC
Trigger: GCATCTAGAATTTGACACTAAACTAGCAAGAGCTCAGACTAAATCAAAATCATATCCGGACACGACTATTTT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000165386.2
ENSMUST00000226261.2
ENSMUST00000228405.2