Pregenerated sensors for CCDC150 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000025983Ensembl transcript IDs: ENSMUST00000027128.11, ENSMUST00000160472.8, ENSMUST00000163072.8
Found 339 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | GTTATATCTAGAGACTTCTGTAGTGGCTCAATCTCACTGCCGTGCTaGGCCTCCACAATCAGCATCCTGGCCTGCCACTGGTCCACTTCC | + |
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Preference number: 1 (lower is better) Translates to: VISRDFCSGSISLPC*ASTISILACHWSTS Trigger: GGAAGTGGACCAGTGGCAGGCCAGGATGCTGATTGTGGAGGCCCAGCACGGCAGTGAGATTGAGCCACTACAGAAGTCTCTAGATATAAC 54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000160472.8 |
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| 3UTR GCA 90 bp | CTAGTTATATCTAGAGACTTCTGTAGTGGCTCAATCTCACTGCCGTaGTGGGCCTCCACAATCAGCATCCTGGCCTGCCACTGGTCCACT | + |
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Preference number: 1 (lower is better) Translates to: LVISRDFCSGSISLP*WASTISILACHWST Trigger: AGTGGACCAGTGGCAGGCCAGGATGCTGATTGTGGAGGCCCAGCACGGCAGTGAGATTGAGCCACTACAGAAGTCTCTAGATATAACTAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000160472.8 |
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| 3UTR GCA 90 bp | CGCTCTGCATGCAATTCTGCTTCTACTTTGGATTCCTCAGCAACCTaGTCTTTGAAGGCTTCCAGACTCTGCCGCTCACGCTCTTTGCTT | + |
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Preference number: 1 (lower is better) Translates to: RSACNSASTLDSSAT*SLKASRLCRSRSLL Trigger: AAGCAAAGAGCGTGAGCGGCAGAGTCTGGAAGCCTTCAAAGAGCAGGTTGCTGAGGAATCCAAAGTAGAAGCAGAATTGCATGCAGAGCG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000160472.8 |
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| 3UTR TCA 90 bp | AGACTCTGCCGCTCACGCTCTTTGCTTTCCAGTTTTTCTTGGAGGTaGTCAAGCTTTGACTGCAGATGGCCATTTGTCTGGAGAGCTTGC | + |
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Preference number: 1 (lower is better) Translates to: RLCRSRSLLSSFSWR*SSFDCRWPFVWRAC Trigger: GCAAGCTCTCCAGACAAATGGCCATCTGCAGTCAAAGCTTGATCACCTCCAAGAAAAACTGGAAAGCAAAGAGCGTGAGCGGCAGAGTCT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000160472.8 |
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| 3UTR GCA 90 bp | GCAATGTGTTTGTACAGTGTCCCGACAGCCATCAGTCTGAGGAAGTaGTCTCTGGGTGAGACTGTTCTGACTCCACACTGGCTTCTTTTA | + |
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Preference number: 1 (lower is better) Translates to: AMCLYSVPTAISLRK*SLGETVLTPHWLLL Trigger: TAAAAGAAGCCAGTGTGGAGTCAGAACAGTCTCACCCAGAGAGCACTTCCTCAGACTGATGGCTGTCGGGACACTGTACAAACACATTGC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000160472.8 |
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| 3UTR TCA 90 bp | GCCTGCCACTGGTCCACTTCCGCTTCAAGCTTTTGTACTCTTTGTTaGTTTAGAGACCTTTCCTTCTTAAGGCCTGCGATCTCCGAATCC | + |
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Preference number: 1 (lower is better) Translates to: ACHWSTSASSFCTLC*FRDLSFLRPAISES Trigger: GGATTCGGAGATCGCAGGCCTTAAGAAGGAAAGGTCTCTAAATCAACAAAGAGTACAAAAGCTTGAAGCGGAAGTGGACCAGTGGCAGGC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000160472.8 |
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| 3UTR TCA 90 bp | CGATGTAGAACAGATTGGCTGGTTGCAACATTATGCATCATATCTTaGTTCTCTTCCAGCCACCTGTCTTCCCGGGGAAGCCTCTGCAAC | + |
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Preference number: 1 (lower is better) Translates to: RCRTDWLVATLCIIS*FSSSHLSSRGSLCN Trigger: GTTGCAGAGGCTTCCCCGGGAAGACAGGTGGCTGGAAGAGAATCAAGATATGATGCATAATGTTGCAACCAGCCAATCTGTTCTACATCG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000160472.8 |
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| 3UTR GCA 90 bp | CTCTCTCTCGGTTTGAAACTGCTTCCTCAGAGCTTCAATGCGCTCTaGATGCAATTCTGCTTCTACTTTGGATTCCTCAGCAACCTGCTC | + |
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Preference number: 1 (lower is better) Translates to: LSLGLKLLPQSFNAL*MQFCFYFGFLSNLL Trigger: GAGCAGGTTGCTGAGGAATCCAAAGTAGAAGCAGAATTGCATGCAGAGCGCATTGAAGCTCTGAGGAAGCAGTTTCAAACCGAGAGAGAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000160472.8 |
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| 3UTR TCA 90 bp | GAAACTTCCCTCTGTGATGCTTTCTTTGCAGTCTCTCTCTCGGTTTaGAACTGCTTCCTCAGAGCTTCAATGCGCTCTGCATGCAATTCT | + |
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Preference number: 1 (lower is better) Translates to: ETSLCDAFFAVSLSV*NCFLRASMRSACNS Trigger: AGAATTGCATGCAGAGCGCATTGAAGCTCTGAGGAAGCAGTTTCAAACCGAGAGAGAGACTGCAAAGAAAGCATCACAGAGGGAAGTTTC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000160472.8 |
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| 3UTR GCA 90 bp | TTGAAACTGCTTCCTCAGAGCTTCAATGCGCTCTGCATGCAATTCTaGTTCTACTTTGGATTCCTCAGCAACCTGCTCTTTGAAGGCTTC | + |
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Preference number: 1 (lower is better) Translates to: LKLLPQSFNALCMQF*FYFGFLSNLLFEGF Trigger: GAAGCCTTCAAAGAGCAGGTTGCTGAGGAATCCAAAGTAGAAGCAGAATTGCATGCAGAGCGCATTGAAGCTCTGAGGAAGCAGTTTCAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000160472.8 |
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| 3UTR CCA 90 bp | AGGAGACACCTGTGTCAAGGTCACTTCTTCCTCTCTGTGTCAGAATaGTACTTCTGCTTAGTTTCCCATCGATGTAGAACAGATTGGCTG | + |
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Preference number: 1 (lower is better) Translates to: RRHLCQGHFFLSVSE*YFCLVSHRCRTDWL Trigger: CAGCCAATCTGTTCTACATCGATGGGAAACTAAGCAGAAGTACCATTCTGACACAGAGAGGAAGAAGTGACCTTGACACAGGTGTCTCCT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000160472.8 |
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| 3UTR TCA 90 bp | AGTTCTTCCTCATTTTTCCCAAGAATAGATTTCATCTCTTTCAGGTaGGCTTCTGTCTGCTCCAGATACGCCTTGCTGGCACTCAGCTCT | + |
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Preference number: 1 (lower is better) Translates to: SSSSFFPRIDFISFR*ASVCSRYALLALSS Trigger: AGAGCTGAGTGCCAGCAAGGCGTATCTGGAGCAGACAGAAGCTCACCTGAAAGAGATGAAATCTATTCTTGGGAAAAATGAGGAAGAACT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000160472.8 |
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| 3UTR GCA 90 bp | CTGTGTCAAGGTCACTTCTTCCTCTCTGTGTCAGAATGGTACTTCTaGTTAGTTTCCCATCGATGTAGAACAGATTGGCTGGTTGCAACA | + |
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Preference number: 1 (lower is better) Translates to: LCQGHFFLSVSEWYF*LVSHRCRTDWLVAT Trigger: TGTTGCAACCAGCCAATCTGTTCTACATCGATGGGAAACTAAGCAGAAGTACCATTCTGACACAGAGAGGAAGAAGTGACCTTGACACAG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000160472.8 |
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| 3UTR TCA 90 bp | AGCTTATGTAGATGGTCCTTCTGCAGCATGGTTTCAGCGAATGTGTaGAGCTGTGCTTCTAGCTGTTTAACCTTTGTCTCTTCCTTTCAG | + |
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Preference number: 1 (lower is better) Translates to: SLCRWSFCSMVSANV*SCASSCLTFVSSFQ Trigger: CTGAAAGGAAGAGACAAAGGTTAAACAGCTAGAAGCACAGCTTCACACATTCGCTGAAACCATGCTGCAGAAGGACCATCTACATAAGCT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000160472.8 |
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| 3UTR GCA 90 bp | TTTCAACTTCTGGCTCTCTTTCAGGGCAGCATCTCGACACTTCACTaGTTGGGCCAGTTCTTCCTCATTTTTCCCAAGAATAGATTTCAT | + |
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Preference number: 1 (lower is better) Translates to: FQLLALFQGSISTLH*LGQFFLIFPKNRFH Trigger: ATGAAATCTATTCTTGGGAAAAATGAGGAAGAACTGGCCCAAGCAGTGAAGTGTCGAGATGCTGCCCTGAAAGAGAGCCAGAAGTTGAAA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000160472.8 |
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| 3UTR CAA 90 bp | CAGCACACATCATGGTCTTCTAACGTAGAAACAGGCCAGCCCCACTaGCTGGCCAGCAGAATAGCTTCTACGGAGGAGACACCTGTGTCA | + |
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Preference number: 2 (lower is better) Translates to: QHTSWSSNVETGQPH*LASRIASTEETPVS Trigger: TGACACAGGTGTCTCCTCCGTAGAAGCTATTCTGCTGGCCAGCAAGTGGGGCTGGCCTGTTTCTACGTTAGAAGACCATGATGTGTGCTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000027128.11 ENSMUST00000163072.8 |
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| 3UTR-3UTR GCA 90 bp | CATATCTCCCATGGGTTCCTTGCAATGTGTTTGTACAGTGTCCCGACAGCCATCGATCCTCAGCTGCACTaGCTCCCACTCTCCAACTCC | + |
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Preference number: 2 (lower is better) Translates to: HISHGFLAMCLYSVPTAIDPQLH*LPLSNS Trigger: GGAGTTGGAGAGTGGGAGGCAGTGCAGCTGAGGATC...GATGGCTGTCGGGACACTGTACAAACACATTGCAAGGAACCCATGGGAGATATG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000160472.8 |
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| 3UTR-3UTR TCA 90 bp | TTTGGATTCCTCAGCAACCTGCTCTTTGAAGGCTTCCAGACTCTGCCGCTCACGCCCTGCATCTTACTGTaGGAAGCCAGCACATTTTCC | + |
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Preference number: 2 (lower is better) Translates to: FGFLSNLLFEGFQTLPLTPCILL*EASTFS Trigger: GGAAAATGTGCTGGCTTCTCACAGTAAGATGCAGGG...CGTGAGCGGCAGAGTCTGGAAGCCTTCAAAGAGCAGGTTGCTGAGGAATCCAAA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000160472.8 |
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| 3UTR-3UTR TCA 90 bp | GCATCATATCTTGATTCTCTTCCAGCCACCTGTCTTCCCGGGGAAGCCTCTGCAGTCTCTCTCTCGGTTTaGAACTGCTTCCTCAGAGCT | + |
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Preference number: 2 (lower is better) Translates to: ASYLDSLPATCLPGEASAVSLSV*NCFLRA Trigger: AGCTCTGAGGAAGCAGTTTCAAACCGAGAGAGAGAC...TGCAGAGGCTTCCCCGGGAAGACAGGTGGCTGGAAGAGAATCAAGATATGATGC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000160472.8 |
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| 3UTR-3UTR GCA 90 bp | TTTGGATTCCTCAGCAACCTGCTCTTTGAAGGCTTCCAGACTCTGCCGCTCACGTTTGTCTGGAGAGCTTaGTCTAGGCTCATGGCCAGT | + |
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Preference number: 2 (lower is better) Translates to: FGFLSNLLFEGFQTLPLTFVWRA*SRLMAS Trigger: ACTGGCCATGAGCCTAGAGCAAGCTCTCCAGACAAA...CGTGAGCGGCAGAGTCTGGAAGCCTTCAAAGAGCAGGTTGCTGAGGAATCCAAA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000160472.8 |
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| 3UTR-3UTR CCA 90 bp | TTTGGATTCCTCAGCAACCTGCTCTTTGAAGGCTTCCAGACTCTGCCGCTCACGTCCCCTTTCAACTTCTaGCTCTCTTTCAGGGCAGCA | + |
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Preference number: 2 (lower is better) Translates to: FGFLSNLLFEGFQTLPLTSPFNF*LSFRAA Trigger: TGCTGCCCTGAAAGAGAGCCAGAAGTTGAAAGGGGA...CGTGAGCGGCAGAGTCTGGAAGCCTTCAAAGAGCAGGTTGCTGAGGAATCCAAA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000160472.8 |
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| 3UTR-3UTR CCA 90 bp | TTTGGATTCCTCAGCAACCTGCTCTTTGAAGGCTTCCAGACTCTGCCGCTCACGAGATGGCCATTTGTCTaGAGAGCTTGCTCTAGGCTC | + |
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Preference number: 2 (lower is better) Translates to: FGFLSNLLFEGFQTLPLTRWPFV*RACSRL Trigger: GAGCCTAGAGCAAGCTCTCCAGACAAATGGCCATCT...CGTGAGCGGCAGAGTCTGGAAGCCTTCAAAGAGCAGGTTGCTGAGGAATCCAAA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000160472.8 |
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| 3UTR CAA 90 bp | AGTTTTTCCTTGTTACTGTTCACCACTTTTTCCAGCTCCGTAGCTTaGTGTCGTAGCTCTCGGTTTGCCCGGGACACTTCCACCGACCTG | + |
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Preference number: 2 (lower is better) Translates to: SFSLLLFTTFSSSVA*CRSSRFARDTSTDL Trigger: CAGGTCGGTGGAAGTGTCCCGGGCAAACCGAGAGCTACGACACAAAGCTACGGAGCTGGAAAAAGTGGTGAACAGTAACAAGGAAAAACT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000160472.8 |
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| 3UTR CAA 90 bp | CTTCCAGCCACCTGTCTTCCCGGGGAAGCCTCTGCAACCGGTTTTTaGTCAGCTCAAGTTGTAGTCCATCGAACCTTGTACATCAGAAGA | + |
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Preference number: 2 (lower is better) Translates to: LPATCLPGEASATGF*SAQVVVHRTLYIRR Trigger: TCTTCTGATGTACAAGGTTCGATGGACTACAACTTGAGCTGACAAAAAACCGGTTGCAGAGGCTTCCCCGGGAAGACAGGTGGCTGGAAG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000160472.8 |
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| 3UTR-3UTR TCA 90 bp | CATATCTCCCATGGGTTCCTTGCAATGTGTTTGTACAGTGTCCCGACAGCCATCGAAGTGCTCTCTGGGTaGGACTGTTCTGACTCCACA | + |
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Preference number: 2 (lower is better) Translates to: HISHGFLAMCLYSVPTAIEVLSG*DCSDST Trigger: TGTGGAGTCAGAACAGTCTCACCCAGAGAGCACTTC...GATGGCTGTCGGGACACTGTACAAACACATTGCAAGGAACCCATGGGAGATATG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000160472.8 |
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| 3UTR-3UTR CCA 90 bp | CTTCGTCAAGAGCTTTCTTCAGCTCAGAAACTTCCCTCTGTGATGCTTTCTTTGATCCTGGCCTGCCACTaGTCCACTTCCGCTTCAAGC | + |
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Preference number: 2 (lower is better) Translates to: LRQELSSAQKLPSVMLSLILACH*STSASS Trigger: GCTTGAAGCGGAAGTGGACCAGTGGCAGGCCAGGAT...CAAAGAAAGCATCACAGAGGGAAGTTTCTGAGCTGAAGAAAGCTCTTGACGAAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000160472.8 |
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| 3UTR CAA 90 bp | CCAGTTTTTCTTGGAGGTGATCAAGCTTTGACTGCAGATGGCCATTaGTCTGGAGAGCTTGCTCTAGGCTCATGGCCAGTTTCCTGTTGT | + |
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Preference number: 2 (lower is better) Translates to: PVFLGGDQALTADGH*SGELALGSWPVSCC Trigger: ACAACAGGAAACTGGCCATGAGCCTAGAGCAAGCTCTCCAGACAAATGGCCATCTGCAGTCAAAGCTTGATCACCTCCAAGAAAAACTGG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000160472.8 |
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| 3UTR CAA 90 bp | GCTCACGCTCTTTGCTTTCCAGTTTTTCTTGGAGGTGATCAAGCTTaGACTGCAGATGGCCATTTGTCTGGAGAGCTTGCTCTAGGCTCA | + |
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Preference number: 2 (lower is better) Translates to: AHALCFPVFLGGDQA*TADGHLSGELALGS Trigger: TGAGCCTAGAGCAAGCTCTCCAGACAAATGGCCATCTGCAGTCAAAGCTTGATCACCTCCAAGAAAAACTGGAAAGCAAAGAGCGTGAGC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000160472.8 |
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| 3UTR CAA 90 bp | TTCCTCAGAGCTTCAATGCGCTCTGCATGCAATTCTGCTTCTACTTaGGATTCCTCAGCAACCTGCTCTTTGAAGGCTTCCAGACTCTGC | + |
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Preference number: 2 (lower is better) Translates to: FLRASMRSACNSAST*DSSATCSLKASRLC Trigger: GCAGAGTCTGGAAGCCTTCAAAGAGCAGGTTGCTGAGGAATCCAAAGTAGAAGCAGAATTGCATGCAGAGCGCATTGAAGCTCTGAGGAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000160472.8 |
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| 3UTR-3UTR GCA 90 bp | TCCTCTCCATGTTCTGTGCGTTATTTGCCTTGGCTGACAAGTGCAGCTTTATTTTTTCAGATCCTCAGCTaGACTGCCTCCCACTCTCCA | + |
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Preference number: 2 (lower is better) Translates to: SSPCSVRYLPWLTSAALFFQILS*TASHSP Trigger: TGGAGAGTGGGAGGCAGTGCAGCTGAGGATCTGAAA...AAATAAAGCTGCACTTGTCAGCCAAGGCAAATAACGCACAGAACATGGAGAGGA 48% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt. Matches the following 1 transcripts: ENSMUST00000160472.8 |
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| 3UTR-3UTR GCA 90 bp | TCCTCTCCATGTTCTGTGCGTTATTTGCCTTGGCTGACAAGTGCAGCTTTATTTTTCCTTCTTAAGGCCTaGGATCTCCGAATCCCTCCG | + |
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Preference number: 2 (lower is better) Translates to: SSPCSVRYLPWLTSAALFFLLKA*DLRIPP Trigger: CGGAGGGATTCGGAGATCGCAGGCCTTAAGAAGGAA...AAATAAAGCTGCACTTGTCAGCCAAGGCAAATAACGCACAGAACATGGAGAGGA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000160472.8 |
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| 3UTR-3UTR GCA 90 bp | CATATCTCCCATGGGTTCCTTGCAATGTGTTTGTACAGTGTCCCGACAGCCATCAGCTCCATCTCCTTCTaGAGGGTATTCATCTCAGAT | + |
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Preference number: 2 (lower is better) Translates to: HISHGFLAMCLYSVPTAISSISF*RVFISD Trigger: ATCTGAGATGAATACCCTGCAGAAGGAGATGGAGCT...GATGGCTGTCGGGACACTGTACAAACACATTGCAAGGAACCCATGGGAGATATG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000160472.8 |
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| 3UTR-3UTR CCA 90 bp | TTTCAGGGCAGCATCTCGACACTTCACTGCTTGGGCCAGTTCTTCCTCATTTTTGGTCCTTCTGCAGCATaGTTTCAGCGAATGTGTGAA | + |
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Preference number: 2 (lower is better) Translates to: FQGSISTLHCLGQFFLIFGPSAA*FQRMCE Trigger: TTCACACATTCGCTGAAACCATGCTGCAGAAGGACC...AAAAATGAGGAAGAACTGGCCCAAGCAGTGAAGTGTCGAGATGCTGCCCTGAAA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000160472.8 |
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| 3UTR-3UTR CCA 90 bp | CATATCTCCCATGGGTTCCTTGCAATGTGTTTGTACAGTGTCCCGACAGCCATCGTGCGTTATTTGCCTTaGCTGACAAGTGCAGCTTTA | + |
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Preference number: 2 (lower is better) Translates to: HISHGFLAMCLYSVPTAIVRYLP*LTSAAL Trigger: TAAAGCTGCACTTGTCAGCCAAGGCAAATAACGCAC...GATGGCTGTCGGGACACTGTACAAACACATTGCAAGGAACCCATGGGAGATATG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000160472.8 |
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| 3UTR CAA 90 bp | CAACTTCTGGCTCTCTTTCAGGGCAGCATCTCGACACTTCACTGCTaGGGCCAGTTCTTCCTCATTTTTCCCAAGAATAGATTTCATCTC | + |
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Preference number: 2 (lower is better) Translates to: QLLALFQGSISTLHC*GQFFLIFPKNRFHL Trigger: GAGATGAAATCTATTCTTGGGAAAAATGAGGAAGAACTGGCCCAAGCAGTGAAGTGTCGAGATGCTGCCCTGAAAGAGAGCCAGAAGTTG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000160472.8 |
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| 3UTR CAA 90 bp | CAAGAGCTTTCTTCAGCTCAGAAACTTCCCTCTGTGATGCTTTCTTaGCAGTCTCTCTCTCGGTTTGAAACTGCTTCCTCAGAGCTTCAA | + |
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Preference number: 2 (lower is better) Translates to: QELSSAQKLPSVMLS*QSLSRFETASSELQ Trigger: TTGAAGCTCTGAGGAAGCAGTTTCAAACCGAGAGAGAGACTGCAAAGAAAGCATCACAGAGGGAAGTTTCTGAGCTGAAGAAAGCTCTTG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000160472.8 |
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| 3UTR-3UTR TCA 90 bp | CATATCTCCCATGGGTTCCTTGCAATGTGTTTGTACAGTGTCCCGACAGCCATCAGCTCTGAGTTTGCCTaGGTATATTTGACCTCTAAA | + |
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Preference number: 2 (lower is better) Translates to: HISHGFLAMCLYSVPTAISSEFA*VYLTSK Trigger: TTTAGAGGTCAAATATACTCAGGCAAACTCAGAGCT...GATGGCTGTCGGGACACTGTACAAACACATTGCAAGGAACCCATGGGAGATATG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000160472.8 |
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| 3UTR-3UTR TCA 90 bp | GTGTCAGAATGGTACTTCTGCTTAGTTTCCCATCGATGTAGAACAGATTGGCTGTTCATCTCTTTCAGGTaGGCTTCTGTCTGCTCCAGA | + |
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Preference number: 2 (lower is better) Translates to: VSEWYFCLVSHRCRTDWLFISFR*ASVCSR Trigger: TCTGGAGCAGACAGAAGCTCACCTGAAAGAGATGAA...CAGCCAATCTGTTCTACATCGATGGGAAACTAAGCAGAAGTACCATTCTGACAC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000160472.8 |
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| 3UTR-3UTR CCA 90 bp | CTTCGTCAAGAGCTTTCTTCAGCTCAGAAACTTCCCTCTGTGATGCTTTCTTTGCGACACTTCACTGCTTaGGCCAGTTCTTCCTCATTT | + |
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Preference number: 2 (lower is better) Translates to: LRQELSSAQKLPSVMLSLRHFTA*ASSSSF Trigger: AAATGAGGAAGAACTGGCCCAAGCAGTGAAGTGTCG...CAAAGAAAGCATCACAGAGGGAAGTTTCTGAGCTGAAGAAAGCTCTTGACGAAG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000160472.8 |
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| 3UTR CAA 90 bp | TTTGCCTTGGCTGACAAGTGCAGCTTTATTTGGGCCCTTTGGTTCTaGAGTTTTTCCTTGTTACTGTTCACCACTTTTTCCAGCTCCGTA | + |
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Preference number: 2 (lower is better) Translates to: FALADKCSFIWALWF*SFSLLLFTTFSSSV Trigger: TACGGAGCTGGAAAAAGTGGTGAACAGTAACAAGGAAAAACTCAAGAACCAAAGGGCCCAAATAAAGCTGCACTTGTCAGCCAAGGCAAA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000160472.8 |
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| 3UTR-3UTR TCA 90 bp | TCCTCTCCATGTTCTGTGCGTTATTTGCCTTGGCTGACAAGTGCAGCTTTATTTAGAAACTTCCCTCTGTaGTGCTTTCTTTGCAGTCTC | + |
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Preference number: 2 (lower is better) Translates to: SSPCSVRYLPWLTSAALFRNFPL*CFLCSL Trigger: GAGACTGCAAAGAAAGCATCACAGAGGGAAGTTTCT...AAATAAAGCTGCACTTGTCAGCCAAGGCAAATAACGCACAGAACATGGAGAGGA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000160472.8 |
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| 3UTR-3UTR GCA 90 bp | ATTCCTTGCACCGATTTTCTAGTTCCAGCCTCATTTTTCTCTCAGCCACTAGTCTGTAGATGGTCCTTCTaGAGCATGGTTTCAGCGAAT | + |
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Preference number: 2 (lower is better) Translates to: IPCTDFLVPASFFSQPLVCRWSF*SMVSAN Trigger: ATTCGCTGAAACCATGCTGCAGAAGGACCATCTACA...GACTAGTGGCTGAGAGAAAAATGAGGCTGGAACTAGAAAATCGGTGCAAGGAAT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000160472.8 |
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| 3UTR-3UTR GCA 90 bp | TGCTTAGTTTCCCATCGATGTAGAACAGATTGGCTGGTTGCAACATTATGCATCGCCGCTCACGCTCTTTaGTTTCCAGTTTTTCTTGGA | + |
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Preference number: 2 (lower is better) Translates to: CLVSHRCRTDWLVATLCIAAHAL*FPVFLG Trigger: TCCAAGAAAAACTGGAAAGCAAAGAGCGTGAGCGGC...GATGCATAATGTTGCAACCAGCCAATCTGTTCTACATCGATGGGAAACTAAGCA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000160472.8 |
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| 3UTR-3UTR CCA 90 bp | AGGTCACTTCTTCCTCTCTGTGTCAGAATGGTACTTCTGCTTAGTTTCCCATCGATTCTGCTTCTACTTTaGATTCCTCAGCAACCTGCT | + |
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Preference number: 2 (lower is better) Translates to: RSLLPLCVRMVLLLSFPSILLLL*IPQQPA Trigger: AGCAGGTTGCTGAGGAATCCAAAGTAGAAGCAGAAT...CGATGGGAAACTAAGCAGAAGTACCATTCTGACACAGAGAGGAAGAAGTGACCT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000160472.8 |
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| 3UTR CAA 90 bp | ATTTCTATTTGCTTCATCCTCTCCATGTTCTGTGCGTTATTTGCCTaGGCTGACAAGTGCAGCTTTATTTGGGCCCTTTGGTTCTTGAGT | + |
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Preference number: 2 (lower is better) Translates to: ISICFILSMFCALFA*ADKCSFIWALWFLS Trigger: ACTCAAGAACCAAAGGGCCCAAATAAAGCTGCACTTGTCAGCCAAGGCAAATAACGCACAGAACATGGAGAGGATGAAGCAAATAGAAAT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000160472.8 |
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| 3UTR CAA 90 bp | ATTCCATTTCTATTTGCTTCATCCTCTCCATGTTCTGTGCGTTATTaGCCTTGGCTGACAAGTGCAGCTTTATTTGGGCCCTTTGGTTCT | + |
|
Preference number: 2 (lower is better) Translates to: IPFLFASSSPCSVRY*PWLTSAALFGPFGS Trigger: AGAACCAAAGGGCCCAAATAAAGCTGCACTTGTCAGCCAAGGCAAATAACGCACAGAACATGGAGAGGATGAAGCAAATAGAAATGGAAT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000160472.8 |
||
| 3UTR-3UTR TCA 90 bp | ATTCCTTGCACCGATTTTCTAGTTCCAGCCTCATTTTTCTCTCAGCCACTAGTCGTTATTTGCCTTGGCTaGCAAGTGCAGCTTTATTTG | + |
|
Preference number: 2 (lower is better) Translates to: IPCTDFLVPASFFSQPLVVICLG*QVQLYL Trigger: CAAATAAAGCTGCACTTGTCAGCCAAGGCAAATAAC...GACTAGTGGCTGAGAGAAAAATGAGGCTGGAACTAGAAAATCGGTGCAAGGAAT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000160472.8 |
||
| 3UTR-3UTR TCA 90 bp | TGCTTAGTTTCCCATCGATGTAGAACAGATTGGCTGGTTGCAACATTATGCATCTCTGCTAATTGTTTCTaGAAGTTTCCCACCTTCTTG | + |
|
Preference number: 2 (lower is better) Translates to: CLVSHRCRTDWLVATLCISANCF*KFPTFL Trigger: CAAGAAGGTGGGAAACTTTCAGAAACAATTAGCAGA...GATGCATAATGTTGCAACCAGCCAATCTGTTCTACATCGATGGGAAACTAAGCA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000160472.8 |
||
| 3UTR-3UTR GCA 90 bp | CTTCCAATTCCTTGCACCGATTTTCTAGTTCCAGCCTCATTTTTCTCTCAGCCAATACAAATCTCTGGATaGTCAAGGACTGTTCATAGT | + |
|
Preference number: 2 (lower is better) Translates to: LPIPCTDFLVPASFFSQPIQISG*SRTVHS Trigger: ACTATGAACAGTCCTTGAGCATCCAGAGATTTGTAT...TGGCTGAGAGAAAAATGAGGCTGGAACTAGAAAATCGGTGCAAGGAATTGGAAG 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000160472.8 |
||
| 3UTR CCA 72 bp | ACTCTCCAACTCCAGAGAGCAGCCATCGGGTCACAGTaGTCCCACCCAGGGACCTGGAGCCAGAAGCAGGGC | + |
|
Preference number: 3 (lower is better) Translates to: TLQLQRAAIGSQ*SHPGTWSQKQG Trigger: GCCCTGCTTCTGGCTCCAGGTCCCTGGGTGGGACCACTGTGACCCGATGGCTGCTCTCTGGAGTTGGAGAGT 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000160472.8 |
||
| 3UTR GCA 72 bp | CTGCCGTGCTGGGCCTCCACAATCAGCATCCTGGCCTaGCACTGGTCCACTTCCGCTTCAAGCTTTTGTACT | + |
|
Preference number: 3 (lower is better) Translates to: LPCWASTISILA*HWSTSASSFCT Trigger: AGTACAAAAGCTTGAAGCGGAAGTGGACCAGTGGCAGGCCAGGATGCTGATTGTGGAGGCCCAGCACGGCAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000160472.8 |
||
| 3UTR CCA 72 bp | AGAGACTTCTGTAGTGGCTCAATCTCACTGCCGTGCTaGGCCTCCACAATCAGCATCCTGGCCTGCCACTGG | + |
|
Preference number: 3 (lower is better) Translates to: RDFCSGSISLPC*ASTISILACHW Trigger: CCAGTGGCAGGCCAGGATGCTGATTGTGGAGGCCCAGCACGGCAGTGAGATTGAGCCACTACAGAAGTCTCT 58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000160472.8 |
||
| 3UTR GCA 72 bp | TCTAGAGACTTCTGTAGTGGCTCAATCTCACTGCCGTaGTGGGCCTCCACAATCAGCATCCTGGCCTGCCAC | + |
|
Preference number: 3 (lower is better) Translates to: SRDFCSGSISLP*WASTISILACH Trigger: GTGGCAGGCCAGGATGCTGATTGTGGAGGCCCAGCACGGCAGTGAGATTGAGCCACTACAGAAGTCTCTAGA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000160472.8 |
||
| 3UTR TCA 72 bp | GTAGCTCTCGGTTTGCCCGGGACACTTCCACCGACCTaGAGTTGGCTTCGTCAAGAGCTTTCTTCAGCTCAG | + |
|
Preference number: 3 (lower is better) Translates to: VALGLPGTLPPT*SWLRQELSSAQ Trigger: CTGAGCTGAAGAAAGCTCTTGACGAAGCCAACTTCAGGTCGGTGGAAGTGTCCCGGGCAAACCGAGAGCTAC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000160472.8 |
||
| 3UTR CCA 72 bp | TGCTGGGCCTCCACAATCAGCATCCTGGCCTGCCACTaGTCCACTTCCGCTTCAAGCTTTTGTACTCTTTGT | + |
|
Preference number: 3 (lower is better) Translates to: CWASTISILACH*STSASSFCTLC Trigger: ACAAAGAGTACAAAAGCTTGAAGCGGAAGTGGACCAGTGGCAGGCCAGGATGCTGATTGTGGAGGCCCAGCA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000160472.8 |
||
| 3UTR-3UTR CAA 90 bp | TTTTCCAGCTCCGTAGCTTTGTGTCGTAGCTCTCGGTTTGCCCGGGACACTTCCAAGTTTCCCACCTTCTaGCTCTCCCTGTCCTCCAAT | + |
|
Preference number: 3 (lower is better) Translates to: FSSSVALCRSSRFARDTSKFPTF*LSLSSN Trigger: ATTGGAGGACAGGGAGAGCAAGAAGGTGGGAAACTT...GGAAGTGTCCCGGGCAAACCGAGAGCTACGACACAAAGCTACGGAGCTGGAAAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000160472.8 |
||
| 3UTR CCA 72 bp | CTGTCCTCCAATGCCTTCAGGTCCCCTTTCAACTTCTaGCTCTCTTTCAGGGCAGCATCTCGACACTTCACT | + |
|
Preference number: 3 (lower is better) Translates to: LSSNAFRSPFNF*LSFRAASRHFT Trigger: AGTGAAGTGTCGAGATGCTGCCCTGAAAGAGAGCCAGAAGTTGAAAGGGGACCTGAAGGCATTGGAGGACAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000160472.8 |
||
| 3UTR-3UTR CAA 90 bp | TTTGGATTCCTCAGCAACCTGCTCTTTGAAGGCTTCCAGACTCTGCCGCTCACGACTGCAGATGGCCATTaGTCTGGAGAGCTTGCTCTA | + |
|
Preference number: 3 (lower is better) Translates to: FGFLSNLLFEGFQTLPLTTADGH*SGELAL Trigger: TAGAGCAAGCTCTCCAGACAAATGGCCATCTGCAGT...CGTGAGCGGCAGAGTCTGGAAGCCTTCAAAGAGCAGGTTGCTGAGGAATCCAAA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000160472.8 |
||
| 3UTR-3UTR CAA 90 bp | TGCTTAGTTTCCCATCGATGTAGAACAGATTGGCTGGTTGCAACATTATGCATCGTCGTAGCTCTCGGTTaGCCCGGGACACTTCCACCG | + |
|
Preference number: 3 (lower is better) Translates to: CLVSHRCRTDWLVATLCIVVALG*PGTLPP Trigger: CGGTGGAAGTGTCCCGGGCAAACCGAGAGCTACGAC...GATGCATAATGTTGCAACCAGCCAATCTGTTCTACATCGATGGGAAACTAAGCA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000160472.8 |
||
| 3UTR GCA 72 bp | TGTTTAACCTTTGTCTCTTCCTTTCAGATCCTCAGCTaGACTGCCTCCCACTCTCCAACTCCAGAGAGCAGC | + |
|
Preference number: 3 (lower is better) Translates to: CLTFVSSFQILS*TASHSPTPESS Trigger: GCTGCTCTCTGGAGTTGGAGAGTGGGAGGCAGTGCAGCTGAGGATCTGAAAGGAAGAGACAAAGGTTAAACA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000160472.8 |
||
| 3UTR GCA 72 bp | TTATATCTAGAGACTTCTGTAGTGGCTCAATCTCACTaGCGTGCTGGGCCTCCACAATCAGCATCCTGGCCT | + |
|
Preference number: 3 (lower is better) Translates to: LYLETSVVAQSH*RAGPPQSASWP Trigger: AGGCCAGGATGCTGATTGTGGAGGCCCAGCACGGCAGTGAGATTGAGCCACTACAGAAGTCTCTAGATATAA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000160472.8 |
||
| 3UTR GCA 72 bp | TCCTCAGCAACCTGCTCTTTGAAGGCTTCCAGACTCTaGCGCTCACGCTCTTTGCTTTCCAGTTTTTCTTGG | + |
|
Preference number: 3 (lower is better) Translates to: SSATCSLKASRL*RSRSLLSSFSW Trigger: CCAAGAAAAACTGGAAAGCAAAGAGCGTGAGCGGCAGAGTCTGGAAGCCTTCAAAGAGCAGGTTGCTGAGGA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000160472.8 |
||
| 3UTR GCA 72 bp | TGCAATTCTGCTTCTACTTTGGATTCCTCAGCAACCTaGTCTTTGAAGGCTTCCAGACTCTGCCGCTCACGC | + |
|
Preference number: 3 (lower is better) Translates to: CNSASTLDSSAT*SLKASRLCRSR Trigger: GCGTGAGCGGCAGAGTCTGGAAGCCTTCAAAGAGCAGGTTGCTGAGGAATCCAAAGTAGAAGCAGAATTGCA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000160472.8 |
||
| 3UTR CCA 72 bp | AGCTCCTGCTGCTTATTTCTCGCCGAGGTCTCATACTaGCTCTTAGTTAACAGCTCCATCTCCTTCTGCAGG | + |
|
Preference number: 3 (lower is better) Translates to: SSCCLFLAEVSY*LLVNSSISFCR Trigger: CCTGCAGAAGGAGATGGAGCTGTTAACTAAGAGCCAGTATGAGACCTCGGCGAGAAATAAGCAGCAGGAGCT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000160472.8 |
||
| 3UTR-3UTR CAA 90 bp | TGCTTAGTTTCCCATCGATGTAGAACAGATTGGCTGGTTGCAACATTATGCATCACAGGCCAGCCCCACTaGCTGGCCAGCAGAATAGCT | + |
|
Preference number: 3 (lower is better) Translates to: CLVSHRCRTDWLVATLCITGQPH*LASRIA Trigger: AGCTATTCTGCTGGCCAGCAAGTGGGGCTGGCCTGT...GATGCATAATGTTGCAACCAGCCAATCTGTTCTACATCGATGGGAAACTAAGCA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000160472.8 |
||
| 3UTR-3UTR CAA 90 bp | GCTTCATCCTCTCCATGTTCTGTGCGTTATTTGCCTTGGCTGACAAGTGCAGCTTCGACACTTCACTGCTaGGGCCAGTTCTTCCTCATT | + |
|
Preference number: 3 (lower is better) Translates to: ASSSPCSVRYLPWLTSAASTLHC*GQFFLI Trigger: AATGAGGAAGAACTGGCCCAAGCAGTGAAGTGTCGA...AGCTGCACTTGTCAGCCAAGGCAAATAACGCACAGAACATGGAGAGGATGAAGC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000160472.8 |
||
| 3UTR GCA 72 bp | CTTTCAGGTGAGCTTCTGTCTGCTCCAGATACGCCTTaGTGGCACTCAGCTCTGAGTTTGCCTGAGTATATT | + |
|
Preference number: 3 (lower is better) Translates to: LSGELLSAPDTP*WHSALSLPEYI Trigger: AATATACTCAGGCAAACTCAGAGCTGAGTGCCAGCAAGGCGTATCTGGAGCAGACAGAAGCTCACCTGAAAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000160472.8 |
||
| 3UTR-3UTR CAA 90 bp | ATAAAGGACAAAGCCCAAAACCTTCAGCACACATCATGGTCTTCTAACGTAGAAACAGGCCAGCCCCACTaGCTGGCCAGCAGAATAGCT | + |
|
Preference number: 3 (lower is better) Translates to: IKDKAQNLQHTSWSSNVETGQPH*LASRIA Trigger: AGCTATTCTGCTGGCCAGCAAGTGGGGCTGGCCTGT...TTCTACGTTAGAAGACCATGATGTGTGCTGAAGGTTTTGGGCTTTGTCCTTTAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000027128.11 ENSMUST00000163072.8 |
||
| 3UTR TCA 72 bp | CGCTCACGCTCTTTGCTTTCCAGTTTTTCTTGGAGGTaGTCAAGCTTTGACTGCAGATGGCCATTTGTCTGG | + |
|
Preference number: 3 (lower is better) Translates to: RSRSLLSSFSWR*SSFDCRWPFVW Trigger: CCAGACAAATGGCCATCTGCAGTCAAAGCTTGATCACCTCCAAGAAAAACTGGAAAGCAAAGAGCGTGAGCG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000160472.8 |
||
| 3UTR TCA 72 bp | CTCTGTGATGCTTTCTTTGCAGTCTCTCTCTCGGTTTaGAACTGCTTCCTCAGAGCTTCAATGCGCTCTGCA | + |
|
Preference number: 3 (lower is better) Translates to: LCDAFFAVSLSV*NCFLRASMRSA Trigger: TGCAGAGCGCATTGAAGCTCTGAGGAAGCAGTTTCAAACCGAGAGAGAGACTGCAAAGAAAGCATCACAGAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000160472.8 |
||
| 3UTR TCA 72 bp | ACAGATTGGCTGGTTGCAACATTATGCATCATATCTTaGTTCTCTTCCAGCCACCTGTCTTCCCGGGGAAGC | + |
|
Preference number: 3 (lower is better) Translates to: TDWLVATLCIIS*FSSSHLSSRGS Trigger: GCTTCCCCGGGAAGACAGGTGGCTGGAAGAGAATCAAGATATGATGCATAATGTTGCAACCAGCCAATCTGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000160472.8 |
||
| 3UTR GCA 72 bp | CTCATTTTTCTCTCAGCCACTAGTCTCAGCTCCTGCTaGTTATTTCTCGCCGAGGTCTCATACTGGCTCTTA | + |
|
Preference number: 3 (lower is better) Translates to: LIFLSATSLSSC*LFLAEVSYWLL Trigger: TAAGAGCCAGTATGAGACCTCGGCGAGAAATAAGCAGCAGGAGCTGAGACTAGTGGCTGAGAGAAAAATGAG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000160472.8 |
||
| 3UTR-3UTR CAA 90 bp | CAGAGAACATCGTACAAAATTCATCTAGAACATCTTACTGTGGCCATTTCACACACAGGCCAGCCCCACTaGCTGGCCAGCAGAATAGCT | + |
|
Preference number: 3 (lower is better) Translates to: QRTSYKIHLEHLTVAISHTGQPH*LASRIA Trigger: AGCTATTCTGCTGGCCAGCAAGTGGGGCTGGCCTGT...GTGTGAAATGGCCACAGTAAGATGTTCTAGATGAATTTTGTACGATGTTCTCTG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000027128.11 |
||
| 3UTR-3UTR CAA 90 bp | CTTCGTCAAGAGCTTTCTTCAGCTCAGAAACTTCCCTCTGTGATGCTTTCTTTGTGCCGCTCACGCTCTTaGCTTTCCAGTTTTTCTTGG | + |
|
Preference number: 3 (lower is better) Translates to: LRQELSSAQKLPSVMLSLCRSRS*LSSFSW Trigger: CCAAGAAAAACTGGAAAGCAAAGAGCGTGAGCGGCA...CAAAGAAAGCATCACAGAGGGAAGTTTCTGAGCTGAAGAAAGCTCTTGACGAAG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000160472.8 |
||
| 3UTR GCA 72 bp | CTTCCTCAGAGCTTCAATGCGCTCTGCATGCAATTCTaGTTCTACTTTGGATTCCTCAGCAACCTGCTCTTT | + |
|
Preference number: 3 (lower is better) Translates to: LPQSFNALCMQF*FYFGFLSNLLF Trigger: AAAGAGCAGGTTGCTGAGGAATCCAAAGTAGAAGCAGAATTGCATGCAGAGCGCATTGAAGCTCTGAGGAAG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000160472.8 |
||
| 3UTR GCA 72 bp | GGTTTGAAACTGCTTCCTCAGAGCTTCAATGCGCTCTaGATGCAATTCTGCTTCTACTTTGGATTCCTCAGC | + |
|
Preference number: 3 (lower is better) Translates to: GLKLLPQSFNAL*MQFCFYFGFLS Trigger: GCTGAGGAATCCAAAGTAGAAGCAGAATTGCATGCAGAGCGCATTGAAGCTCTGAGGAAGCAGTTTCAAACC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000160472.8 |
||
| 3UTR GCA 72 bp | TGTACATCAGAAGACTCATATCTCCCATGGGTTCCTTaGAATGTGTTTGTACAGTGTCCCGACAGCCATCAG | + |
|
Preference number: 3 (lower is better) Translates to: CTSEDSYLPWVP*NVFVQCPDSHQ Trigger: CTGATGGCTGTCGGGACACTGTACAAACACATTGCAAGGAACCCATGGGAGATATGAGTCTTCTGATGTACA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000160472.8 |
||
| 3UTR-3UTR CAA 90 bp | TGCTTCATCCTCTCCATGTTCTGTGCGTTATTTGCCTTGGCTGACAAGTGCAGCAGCATGATTGTAACTTaGCAGTTGTCTTCTTTAGCC | + |
|
Preference number: 3 (lower is better) Translates to: CFILSMFCALFALADKCSSMIVT*QLSSLA Trigger: GGCTAAAGAAGACAACTGCAAAGTTACAATCATGCT...GCTGCACTTGTCAGCCAAGGCAAATAACGCACAGAACATGGAGAGGATGAAGCA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000160472.8 |
||
| 3UTR-3UTR CAA 90 bp | AGGTCACTTCTTCCTCTCTGTGTCAGAATGGTACTTCTGCTTAGTTTCCCATCGTGGGCCCTTTGGTTCTaGAGTTTTTCCTTGTTACTG | + |
|
Preference number: 3 (lower is better) Translates to: RSLLPLCVRMVLLLSFPSWALWF*SFSLLL Trigger: CAGTAACAAGGAAAAACTCAAGAACCAAAGGGCCCA...CGATGGGAAACTAAGCAGAAGTACCATTCTGACACAGAGAGGAAGAAGTGACCT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000160472.8 |
||
| 3UTR TCA 72 bp | AGATGGTCCTTCTGCAGCATGGTTTCAGCGAATGTGTaGAGCTGTGCTTCTAGCTGTTTAACCTTTGTCTCT | + |
|
Preference number: 3 (lower is better) Translates to: RWSFCSMVSANV*SCASSCLTFVS Trigger: AGAGACAAAGGTTAAACAGCTAGAAGCACAGCTTCACACATTCGCTGAAACCATGCTGCAGAAGGACCATCT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000160472.8 |
||
| 3UTR GCA 72 bp | GGTCACTTCTTCCTCTCTGTGTCAGAATGGTACTTCTaGTTAGTTTCCCATCGATGTAGAACAGATTGGCTG | + |
|
Preference number: 3 (lower is better) Translates to: GHFFLSVSEWYF*LVSHRCRTDWL Trigger: CAGCCAATCTGTTCTACATCGATGGGAAACTAAGCAGAAGTACCATTCTGACACAGAGAGGAAGAAGTGACC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000160472.8 |
||
| 3UTR CCA 72 bp | CCTTATTCAGCTTATGTAGATGGTCCTTCTGCAGCATaGTTTCAGCGAATGTGTGAAGCTGTGCTTCTAGCT | + |
|
Preference number: 3 (lower is better) Translates to: PYSAYVDGPSAA*FQRMCEAVLLA Trigger: AGCTAGAAGCACAGCTTCACACATTCGCTGAAACCATGCTGCAGAAGGACCATCTACATAAGCTGAATAAGG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000160472.8 |
||
| 3UTR CCA 72 bp | ATCGAACCTTGTACATCAGAAGACTCATATCTCCCATaGGTTCCTTGCAATGTGTTTGTACAGTGTCCCGAC | + |
|
Preference number: 3 (lower is better) Translates to: IEPCTSEDSYLP*VPCNVFVQCPD Trigger: GTCGGGACACTGTACAAACACATTGCAAGGAACCCATGGGAGATATGAGTCTTCTGATGTACAAGGTTCGAT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000160472.8 |
||
| 3UTR-3UTR CAA 90 bp | TGCTTAGTTTCCCATCGATGTAGAACAGATTGGCTGGTTGCAACATTATGCATCTGTGCGTTATTTGCCTaGGCTGACAAGTGCAGCTTT | + |
|
Preference number: 3 (lower is better) Translates to: CLVSHRCRTDWLVATLCICALFA*ADKCSF Trigger: AAAGCTGCACTTGTCAGCCAAGGCAAATAACGCACA...GATGCATAATGTTGCAACCAGCCAATCTGTTCTACATCGATGGGAAACTAAGCA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000160472.8 |
||
| 3UTR TCA 72 bp | AGATACGCCTTGCTGGCACTCAGCTCTGAGTTTGCCTaGGTATATTTGACCTCTAAAGCCTTATTCAGCTTA | + |
|
Preference number: 3 (lower is better) Translates to: RYALLALSSEFA*VYLTSKALFSL Trigger: TAAGCTGAATAAGGCTTTAGAGGTCAAATATACTCAGGCAAACTCAGAGCTGAGTGCCAGCAAGGCGTATCT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000160472.8 |
||
| 3UTR GCA 72 bp | TCCATGTTCTGTGCGTTATTTGCCTTGGCTGACAAGTaGAGCTTTATTTGGGCCCTTTGGTTCTTGAGTTTT | + |
|
Preference number: 3 (lower is better) Translates to: SMFCALFALADK*SFIWALWFLSF Trigger: AAAACTCAAGAACCAAAGGGCCCAAATAAAGCTGCACTTGTCAGCCAAGGCAAATAACGCACAGAACATGGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000160472.8 |
||
| 3UTR CCA 72 bp | CTGTGTCAAGGTCACTTCTTCCTCTCTGTGTCAGAATaGTACTTCTGCTTAGTTTCCCATCGATGTAGAACA | + |
|
Preference number: 3 (lower is better) Translates to: LCQGHFFLSVSE*YFCLVSHRCRT Trigger: TGTTCTACATCGATGGGAAACTAAGCAGAAGTACCATTCTGACACAGAGAGGAAGAAGTGACCTTGACACAG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000160472.8 |
||
| 3UTR-3UTR CAA 90 bp | TCATCCTCTCCATGTTCTGTGCGTTATTTGCCTTGGCTGACAAGTGCAGCTTTAATTGTAACTTTGCAGTaGTCTTCTTTAGCCTCTGCT | + |
|
Preference number: 3 (lower is better) Translates to: SSSPCSVRYLPWLTSAALIVTLQ*SSLASA Trigger: AGCAGAGGCTAAAGAAGACAACTGCAAAGTTACAAT...TAAAGCTGCACTTGTCAGCCAAGGCAAATAACGCACAGAACATGGAGAGGATGA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000160472.8 |
||
| 3UTR-3UTR CAA 90 bp | ATTCCTTGCACCGATTTTCTAGTTCCAGCCTCATTTTTCTCTCAGCCACTAGTCCTTTATTTGGGCCCTTaGGTTCTTGAGTTTTTCCTT | + |
|
Preference number: 3 (lower is better) Translates to: IPCTDFLVPASFFSQPLVLYLGP*VLEFFL Trigger: AAGGAAAAACTCAAGAACCAAAGGGCCCAAATAAAG...GACTAGTGGCTGAGAGAAAAATGAGGCTGGAACTAGAAAATCGGTGCAAGGAAT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000160472.8 |
||
| 3UTR-3UTR CAA 90 bp | TGCTTAGTTTCCCATCGATGTAGAACAGATTGGCTGGTTGCAACATTATGCATCGTTTCTTCCAATTCCTaGCACCGATTTTCTAGTTCC | + |
|
Preference number: 3 (lower is better) Translates to: CLVSHRCRTDWLVATLCIVSSNS*HRFSSS Trigger: GGAACTAGAAAATCGGTGCAAGGAATTGGAAGAAAC...GATGCATAATGTTGCAACCAGCCAATCTGTTCTACATCGATGGGAAACTAAGCA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000160472.8 |
||
| 3UTR TCA 72 bp | TTACTGTGGCCATTTCACACAACACTAAATTCTTCCTaGAAACAGCAAATACCATGTGACACATCTACTATC | + |
|
Preference number: 3 (lower is better) Translates to: LLWPFHTTLNSS*KQQIPCDTSTI Trigger: GATAGTAGATGTGTCACATGGTATTTGCTGTTTTCAGGAAGAATTTAGTGTTGTGTGAAATGGCCACAGTAA 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027128.11 |
||
| CDS-3UTR CCA 90 bp | CAGCACACATCATGGTCTTCTAACGTAGAAACAGGCCAGCCCCACTTGCTGGCCTCGGCGCGCCACATTTaGAATAACACTGGGCAGGGC | + |
|
Preference number: 4 (lower is better) Translates to: QHTSWSSNVETGQPHLLASARHI*NNTGQG Trigger: GCCCTGCCCAGTGTTATTCCAAATGTGGCGCGCCGA...GGCCAGCAAGTGGGGCTGGCCTGTTTCTACGTTAGAAGACCATGATGTGTGCTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000163072.8 |
||
| CDS-3UTR TCA 90 bp | TTTGGATTCCTCAGCAACCTGCTCTTTGAAGGCTTCCAGACTCTGCCGCTCACGCAGAAGCTGTCCCATTaGTGTGGGTTGGAGACAGGA | + |
|
Preference number: 4 (lower is better) Translates to: FGFLSNLLFEGFQTLPLTQKLSH*CGLETG Trigger: TCCTGTCTCCAACCCACATCAATGGGACAGCTTCTG...CGTGAGCGGCAGAGTCTGGAAGCCTTCAAAGAGCAGGTTGCTGAGGAATCCAAA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000160472.8 |
||
| CDS-3UTR TCA 90 bp | CAGCACACATCATGGTCTTCTAACGTAGAAACAGGCCAGCCCCACTTGCTGGCCCCCTGCATCTTACTGTaGGAAGCCAGCACATTTTCC | + |
|
Preference number: 4 (lower is better) Translates to: QHTSWSSNVETGQPHLLAPCILL*EASTFS Trigger: GGAAAATGTGCTGGCTTCTCACAGTAAGATGCAGGG...GGCCAGCAAGTGGGGCTGGCCTGTTTCTACGTTAGAAGACCATGATGTGTGCTG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000027128.11 ENSMUST00000163072.8 |
||
| CDS-3UTR GCA 90 bp | CAGCACACATCATGGTCTTCTAACGTAGAAACAGGCCAGCCCCACTTGCTGGCCTGCGCCTTTTCATTCTaGACAGCTTGGAGCTCTCCT | + |
|
Preference number: 4 (lower is better) Translates to: QHTSWSSNVETGQPHLLACAFSF*TAWSSP Trigger: AGGAGAGCTCCAAGCTGTGCAGAATGAAAAGGCGCA...GGCCAGCAAGTGGGGCTGGCCTGTTTCTACGTTAGAAGACCATGATGTGTGCTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000027128.11 |
||
| CDS-3UTR CCA 90 bp | CAGCACACATCATGGTCTTCTAACGTAGAAACAGGCCAGCCCCACTTGCTGGCCTCCCCTTTCAACTTCTaGCTCTCTTTCAGGGCAGCA | + |
|
Preference number: 4 (lower is better) Translates to: QHTSWSSNVETGQPHLLASPFNF*LSFRAA Trigger: TGCTGCCCTGAAAGAGAGCCAGAAGTTGAAAGGGGA...GGCCAGCAAGTGGGGCTGGCCTGTTTCTACGTTAGAAGACCATGATGTGTGCTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000027128.11 ENSMUST00000163072.8 |
||
| 3UTR CAA 72 bp | TCATGGTCTTCTAACGTAGAAACAGGCCAGCCCCACTaGCTGGCCAGCAGAATAGCTTCTACGGAGGAGACA | + |
|
Preference number: 4 (lower is better) Translates to: SWSSNVETGQPH*LASRIASTEET Trigger: TGTCTCCTCCGTAGAAGCTATTCTGCTGGCCAGCAAGTGGGGCTGGCCTGTTTCTACGTTAGAAGACCATGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000027128.11 ENSMUST00000163072.8 |
||
| 3UTR CAA 72 bp | TCTCGGTTTGCCCGGGACACTTCCACCGACCTGAAGTaGGCTTCGTCAAGAGCTTTCTTCAGCTCAGAAACT | + |
|
Preference number: 4 (lower is better) Translates to: SRFARDTSTDLK*ASSRAFFSSET Trigger: AGTTTCTGAGCTGAAGAAAGCTCTTGACGAAGCCAACTTCAGGTCGGTGGAAGTGTCCCGGGCAAACCGAGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000160472.8 |
||
| CDS-3UTR TCA 90 bp | CAAAACCTTCAGCACACATCATGGTCTTCTAACGTAGAAACAGGCCAGCCCCACCAGCAACCTGCTCTTTaGAGGCTTCCAGACTCTGCC | + |
|
Preference number: 4 (lower is better) Translates to: QNLQHTSWSSNVETGQPHQQPAL*RLPDSA Trigger: GGCAGAGTCTGGAAGCCTTCAAAGAGCAGGTTGCTG...GTGGGGCTGGCCTGTTTCTACGTTAGAAGACCATGATGTGTGCTGAAGGTTTTG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000027128.11 ENSMUST00000163072.8 |
||
| CDS-3UTR TCA 90 bp | CAGCACACATCATGGTCTTCTAACGTAGAAACAGGCCAGCCCCACTTGCTGGCCCATTTAAACCAGCGGTaGGCCTCTTCCAGATTAGCT | + |
|
Preference number: 4 (lower is better) Translates to: QHTSWSSNVETGQPHLLAHLNQR*ASSRLA Trigger: AGCTAATCTGGAAGAGGCTCACCGCTGGTTTAAATG...GGCCAGCAAGTGGGGCTGGCCTGTTTCTACGTTAGAAGACCATGATGTGTGCTG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000027128.11 ENSMUST00000163072.8 |
||
| CDS-3UTR GCA 90 bp | CAGCACACATCATGGTCTTCTAACGTAGAAACAGGCCAGCCCCACTTGCTGGCCGCCGCTCACGCTCTTTaGTTTCCAGTTTTTCTTGGA | + |
|
Preference number: 4 (lower is better) Translates to: QHTSWSSNVETGQPHLLAAAHAL*FPVFLG Trigger: TCCAAGAAAAACTGGAAAGCAAAGAGCGTGAGCGGC...GGCCAGCAAGTGGGGCTGGCCTGTTTCTACGTTAGAAGACCATGATGTGTGCTG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000027128.11 ENSMUST00000163072.8 |
||
| CDS-3UTR CCA 90 bp | TTTGGATTCCTCAGCAACCTGCTCTTTGAAGGCTTCCAGACTCTGCCGCTCACGGGTTGGAGACAGGACTaGTCTGCACACTGTAGTTTC | + |
|
Preference number: 4 (lower is better) Translates to: FGFLSNLLFEGFQTLPLTGWRQD*SAHCSF Trigger: GAAACTACAGTGTGCAGACCAGTCCTGTCTCCAACC...CGTGAGCGGCAGAGTCTGGAAGCCTTCAAAGAGCAGGTTGCTGAGGAATCCAAA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000160472.8 |
||
| CDS-3UTR CCA 90 bp | GCTTCATCCTCTCCATGTTCTGTGCGTTATTTGCCTTGGCTGACAAGTGCAGCTTTCTTCCGCTGTTCCTaGGCCAGCAGGTCTTGGGTT | + |
|
Preference number: 4 (lower is better) Translates to: ASSSPCSVRYLPWLTSAAFFRCS*ASRSWV Trigger: AACCCAAGACCTGCTGGCCCAGGAACAGCGGAAGAA...AGCTGCACTTGTCAGCCAAGGCAAATAACGCACAGAACATGGAGAGGATGAAGC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000160472.8 |
||
| CDS-3UTR CCA 90 bp | CAGCACACATCATGGTCTTCTAACGTAGAAACAGGCCAGCCCCACTTGCTGGCCAGCTTTGACTGCAGATaGCCATTTGTCTGGAGAGCT | + |
|
Preference number: 4 (lower is better) Translates to: QHTSWSSNVETGQPHLLASFDCR*PFVWRA Trigger: AGCTCTCCAGACAAATGGCCATCTGCAGTCAAAGCT...GGCCAGCAAGTGGGGCTGGCCTGTTTCTACGTTAGAAGACCATGATGTGTGCTG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000027128.11 ENSMUST00000163072.8 |
||
| CDS-3UTR TCA 90 bp | CTTTCAGGTGAGCTTCTGTCTGCTCCAGATACGCCTTGCTGGCACTCAGCTCTGTGTCTTCTTCCTCCTTaGCAACTTTCAATTGCTGGC | + |
|
Preference number: 4 (lower is better) Translates to: LSGELLSAPDTPCWHSALCLLPP*QLSIAG Trigger: GCCAGCAATTGAAAGTTGTCAAGGAGGAAGAAGACA...CAGAGCTGAGTGCCAGCAAGGCGTATCTGGAGCAGACAGAAGCTCACCTGAAAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000160472.8 |
||
| CDS-3UTR TCA 90 bp | AGGTCACTTCTTCCTCTCTGTGTCAGAATGGTACTTCTGCTTAGTTTCCCATCGCTGACAAGCTTCTCCTaGGCCAGTTGTCGCCGTAGC | + |
|
Preference number: 4 (lower is better) Translates to: RSLLPLCVRMVLLLSFPSLTSFS*ASCRRS Trigger: GCTACGGCGACAACTGGCTCAGGAGAAGCTTGTCAG...CGATGGGAAACTAAGCAGAAGTACCATTCTGACACAGAGAGGAAGAAGTGACCT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000160472.8 |
||
| CDS-3UTR GCA 90 bp | TTTGGATTCCTCAGCAACCTGCTCTTTGAAGGCTTCCAGACTCTGCCGCTCACGAGATCAGACTTGAGCTaGGAGATAGTCATCCCCAAG | + |
|
Preference number: 4 (lower is better) Translates to: FGFLSNLLFEGFQTLPLTRSDLS*EIVIPK Trigger: CTTGGGGATGACTATCTCGCAGCTCAAGTCTGATCT...CGTGAGCGGCAGAGTCTGGAAGCCTTCAAAGAGCAGGTTGCTGAGGAATCCAAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000160472.8 |
||
| CDS-3UTR GCA 90 bp | CAGCACACATCATGGTCTTCTAACGTAGAAACAGGCCAGCCCCACTTGCTGGCCAGCTTCAATGCGCTCTaGATGCAATTCTGCTTCTAC | + |
|
Preference number: 4 (lower is better) Translates to: QHTSWSSNVETGQPHLLASFNAL*MQFCFY Trigger: GTAGAAGCAGAATTGCATGCAGAGCGCATTGAAGCT...GGCCAGCAAGTGGGGCTGGCCTGTTTCTACGTTAGAAGACCATGATGTGTGCTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000027128.11 ENSMUST00000163072.8 |
||
| 3UTR CAA 72 bp | CTTGGAGGTGATCAAGCTTTGACTGCAGATGGCCATTaGTCTGGAGAGCTTGCTCTAGGCTCATGGCCAGTT | + |
|
Preference number: 4 (lower is better) Translates to: LGGDQALTADGH*SGELALGSWPV Trigger: AACTGGCCATGAGCCTAGAGCAAGCTCTCCAGACAAATGGCCATCTGCAGTCAAAGCTTGATCACCTCCAAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000160472.8 |
||
| 3UTR CAA 72 bp | TCTGCTTCTACTTTGGATTCCTCAGCAACCTGCTCTTaGAAGGCTTCCAGACTCTGCCGCTCACGCTCTTTG | + |
|
Preference number: 4 (lower is better) Translates to: SASTLDSSATCS*KASRLCRSRSL Trigger: CAAAGAGCGTGAGCGGCAGAGTCTGGAAGCCTTCAAAGAGCAGGTTGCTGAGGAATCCAAAGTAGAAGCAGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000160472.8 |
||
| 3UTR CAA 72 bp | TTGTTACTGTTCACCACTTTTTCCAGCTCCGTAGCTTaGTGTCGTAGCTCTCGGTTTGCCCGGGACACTTCC | + |
|
Preference number: 4 (lower is better) Translates to: LLLFTTFSSSVA*CRSSRFARDTS Trigger: GGAAGTGTCCCGGGCAAACCGAGAGCTACGACACAAAGCTACGGAGCTGGAAAAAGTGGTGAACAGTAACAA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000160472.8 |
||
| 3UTR CAA 72 bp | ACCTGTCTTCCCGGGGAAGCCTCTGCAACCGGTTTTTaGTCAGCTCAAGTTGTAGTCCATCGAACCTTGTAC | + |
|
Preference number: 4 (lower is better) Translates to: TCLPGEASATGF*SAQVVVHRTLY Trigger: GTACAAGGTTCGATGGACTACAACTTGAGCTGACAAAAAACCGGTTGCAGAGGCTTCCCCGGGAAGACAGGT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000160472.8 |
||
| CDS-3UTR GCA 90 bp | CAGCACACATCATGGTCTTCTAACGTAGAAACAGGCCAGCCCCACTTGCTGGCCACTGTAGTTTCCATTTaGACCCCTGATTCATCCAAC | + |
|
Preference number: 4 (lower is better) Translates to: QHTSWSSNVETGQPHLLATVVSI*TPDSSN Trigger: GTTGGATGAATCAGGGGTGCAAATGGAAACTACAGT...GGCCAGCAAGTGGGGCTGGCCTGTTTCTACGTTAGAAGACCATGATGTGTGCTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000027128.11 |
||
| CDS-3UTR GCA 90 bp | GACAAAGCCCAAAACCTTCAGCACACATCATGGTCTTCTAACGTAGAAACAGGCGCTCCAGATACGCCTTaGTGGCACTCAGCTCTGAGT | + |
|
Preference number: 4 (lower is better) Translates to: DKAQNLQHTSWSSNVETGAPDTP*WHSALS Trigger: ACTCAGAGCTGAGTGCCAGCAAGGCGTATCTGGAGC...GCCTGTTTCTACGTTAGAAGACCATGATGTGTGCTGAAGGTTTTGGGCTTTGTC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027128.11 |
||
| CDS-3UTR GCA 90 bp | CAGCACACATCATGGTCTTCTAACGTAGAAACAGGCCAGCCCCACTTGCTGGCCTCAATGCGCTCTGCATaGAATTCTGCTTCTACTTTG | + |
|
Preference number: 4 (lower is better) Translates to: QHTSWSSNVETGQPHLLASMRSA*NSASTL Trigger: CAAAGTAGAAGCAGAATTGCATGCAGAGCGCATTGA...GGCCAGCAAGTGGGGCTGGCCTGTTTCTACGTTAGAAGACCATGATGTGTGCTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000027128.11 ENSMUST00000163072.8 |
||
| CDS-3UTR CCA 90 bp | AAAGCCCAAAACCTTCAGCACACATCATGGTCTTCTAACGTAGAAACAGGCCAGTTCTTCCGCTGTTCCTaGGCCAGCAGGTCTTGGGTT | + |
|
Preference number: 4 (lower is better) Translates to: KAQNLQHTSWSSNVETGQFFRCS*ASRSWV Trigger: AACCCAAGACCTGCTGGCCCAGGAACAGCGGAAGAA...CTGGCCTGTTTCTACGTTAGAAGACCATGATGTGTGCTGAAGGTTTTGGGCTTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027128.11 |
||
| CDS-3UTR CCA 90 bp | CAAAACCTTCAGCACACATCATGGTCTTCTAACGTAGAAACAGGCCAGCCCCACCCTGTGATGCTGGCATaGGCTGCGTCTAACAGTAAA | + |
|
Preference number: 4 (lower is better) Translates to: QNLQHTSWSSNVETGQPHPVMLA*AASNSK Trigger: TTTACTGTTAGACGCAGCCCATGCCAGCATCACAGG...GTGGGGCTGGCCTGTTTCTACGTTAGAAGACCATGATGTGTGCTGAAGGTTTTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000027128.11 |
||
| CDS-3UTR TCA 90 bp | CTGTTTAACCTTTGTCTCTTCCTTTCAGATCCTCAGCTGCACTGCCTCCCACTCTCTGCTGAAGTACTGTaGACGTTTCAGAAGCTGTCC | + |
|
Preference number: 4 (lower is better) Translates to: LFNLCLFLSDPQLHCLPLSAEVL*TFQKLS Trigger: GGACAGCTTCTGAAACGTTCACAGTACTTCAGCAGA...GAGTGGGAGGCAGTGCAGCTGAGGATCTGAAAGGAAGAGACAAAGGTTAAACAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000160472.8 |
||
| CDS-3UTR TCA 90 bp | TTTCAGGGCAGCATCTCGACACTTCACTGCTTGGGCCAGTTCTTCCTCATTTTTTTCTGCCTCCACCACTaGCCCCATCTCTTGTACTTT | + |
|
Preference number: 4 (lower is better) Translates to: FQGSISTLHCLGQFFLIFFCLHH*PHLLYF Trigger: AAAGTACAAGAGATGGGGTCAGTGGTGGAGGCAGAA...AAAAATGAGGAAGAACTGGCCCAAGCAGTGAAGTGTCGAGATGCTGCCCTGAAA 49% GC, longest homopolymer 7 nt, total homopolymer stretches 11 nt. Matches the following 1 transcripts: ENSMUST00000160472.8 |
||
| CDS-3UTR TCA 90 bp | GACAAAGCCCAAAACCTTCAGCACACATCATGGTCTTCTAACGTAGAAACAGGCGAGTCTCCCATCCCCTaGGACATTCTCATAGAAGGC | + |
|
Preference number: 4 (lower is better) Translates to: DKAQNLQHTSWSSNVETGESPIP*DILIEG Trigger: GCCTTCTATGAGAATGTCTCAGGGGATGGGAGACTC...GCCTGTTTCTACGTTAGAAGACCATGATGTGTGCTGAAGGTTTTGGGCTTTGTC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000163072.8 |
||
| CDS-3UTR GCA 90 bp | CTGTTTAACCTTTGTCTCTTCCTTTCAGATCCTCAGCTGCACTGCCTCCCACTCGAGGAGCATGGACGATaGAGATGTCTCAAGAGATTC | + |
|
Preference number: 4 (lower is better) Translates to: LFNLCLFLSDPQLHCLPLEEHGR*RCLKRF Trigger: GAATCTCTTGAGACATCTGCATCGTCCATGCTCCTC...GAGTGGGAGGCAGTGCAGCTGAGGATCTGAAAGGAAGAGACAAAGGTTAAACAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000160472.8 |
||
| CDS-3UTR GCA 90 bp | CAAAACCTTCAGCACACATCATGGTCTTCTAACGTAGAAACAGGCCAGCCCCACTCCTCAGAGCTTCAATaGGCTCTGCATGCAATTCTG | + |
|
Preference number: 4 (lower is better) Translates to: QNLQHTSWSSNVETGQPHSSELQ*ALHAIL Trigger: CAGAATTGCATGCAGAGCGCATTGAAGCTCTGAGGA...GTGGGGCTGGCCTGTTTCTACGTTAGAAGACCATGATGTGTGCTGAAGGTTTTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000027128.11 ENSMUST00000163072.8 |
||
| CDS-3UTR CCA 90 bp | GACAAAGCCCAAAACCTTCAGCACACATCATGGTCTTCTAACGTAGAAACAGGCGCTGTCCCATTGATGTaGGTTGGAGACAGGACTGGT | + |
|
Preference number: 4 (lower is better) Translates to: DKAQNLQHTSWSSNVETGAVPLM*VGDRTG Trigger: ACCAGTCCTGTCTCCAACCCACATCAATGGGACAGC...GCCTGTTTCTACGTTAGAAGACCATGATGTGTGCTGAAGGTTTTGGGCTTTGTC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027128.11 |
||
| CDS-3UTR CCA 90 bp | GCATCATATCTTGATTCTCTTCCAGCCACCTGTCTTCCCGGGGAAGCCTCTGCATGGCAATTTCCAGAGTaGCAGTCAATCTCTGCATTT | + |
|
Preference number: 4 (lower is better) Translates to: ASYLDSLPATCLPGEASAWQFPE*QSISAF Trigger: AAATGCAGAGATTGACTGCCACTCTGGAAATTGCCA...TGCAGAGGCTTCCCCGGGAAGACAGGTGGCTGGAAGAGAATCAAGATATGATGC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000160472.8 |
||
| 3UTR CAA 72 bp | TGCTTCATCCTCTCCATGTTCTGTGCGTTATTTGCCTaGGCTGACAAGTGCAGCTTTATTTGGGCCCTTTGG | + |
|
Preference number: 4 (lower is better) Translates to: CFILSMFCALFA*ADKCSFIWALW Trigger: CCAAAGGGCCCAAATAAAGCTGCACTTGTCAGCCAAGGCAAATAACGCACAGAACATGGAGAGGATGAAGCA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000160472.8 |
||
| CDS-3UTR TCA 90 bp | CAAAACCTTCAGCACACATCATGGTCTTCTAACGTAGAAACAGGCCAGCCCCACCTTCTCAGCCTCCTGTaGTTTCTGAAGACACTGATT | + |
|
Preference number: 4 (lower is better) Translates to: QNLQHTSWSSNVETGQPHLLSLL*FLKTLI Trigger: AATCAGTGTCTTCAGAAATCACAGGAGGCTGAGAAG...GTGGGGCTGGCCTGTTTCTACGTTAGAAGACCATGATGTGTGCTGAAGGTTTTG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000027128.11 |
||
| CDS-3UTR TCA 90 bp | CAAAACCTTCAGCACACATCATGGTCTTCTAACGTAGAAACAGGCCAGCCCCACAGCTGTTATCTGTTCTaGCTCCACACTGGCTTCTTT | + |
|
Preference number: 4 (lower is better) Translates to: QNLQHTSWSSNVETGQPHSCYLF*LHTGFF Trigger: AAAGAAGCCAGTGTGGAGTCAGAACAGATAACAGCT...GTGGGGCTGGCCTGTTTCTACGTTAGAAGACCATGATGTGTGCTGAAGGTTTTG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000027128.11 ENSMUST00000163072.8 |
||
| CDS-3UTR GCA 90 bp | CAGCACACATCATGGTCTTCTAACGTAGAAACAGGCCAGCCCCACTTGCTGGCCATACAAATCTCTGGATaGTCAAGGACTGTTCATAGT | + |
|
Preference number: 4 (lower is better) Translates to: QHTSWSSNVETGQPHLLAIQISG*SRTVHS Trigger: ACTATGAACAGTCCTTGAGCATCCAGAGATTTGTAT...GGCCAGCAAGTGGGGCTGGCCTGTTTCTACGTTAGAAGACCATGATGTGTGCTG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000027128.11 ENSMUST00000163072.8 |
||
| CDS-3UTR GCA 90 bp | CAGCACACATCATGGTCTTCTAACGTAGAAACAGGCCAGCCCCACTTGCTGGCCTTTCTTCCAATTCCTTaGACCGATTTTCTAGTTCCA | + |
|
Preference number: 4 (lower is better) Translates to: QHTSWSSNVETGQPHLLAFLPIP*TDFLVP Trigger: TGGAACTAGAAAATCGGTGCAAGGAATTGGAAGAAA...GGCCAGCAAGTGGGGCTGGCCTGTTTCTACGTTAGAAGACCATGATGTGTGCTG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000027128.11 ENSMUST00000163072.8 |
||
| CDS-3UTR CCA 90 bp | GACAAAGCCCAAAACCTTCAGCACACATCATGGTCTTCTAACGTAGAAACAGGCGGTTGGAGACAGGACTaGTCTGCACACTGTAGTTTC | + |
|
Preference number: 4 (lower is better) Translates to: DKAQNLQHTSWSSNVETGGWRQD*SAHCSF Trigger: GAAACTACAGTGTGCAGACCAGTCCTGTCTCCAACC...GCCTGTTTCTACGTTAGAAGACCATGATGTGTGCTGAAGGTTTTGGGCTTTGTC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027128.11 |
||
| CDS-3UTR CCA 90 bp | TGCTTCTACTTTGGATTCCTCAGCAACCTGCTCTTTGAAGGCTTCCAGACTCTGACAGCTTCAGGCCCTTaGAATGCTCCCCTTGTATTA | + |
|
Preference number: 4 (lower is better) Translates to: CFYFGFLSNLLFEGFQTLTASGP*NAPLVL Trigger: TAATACAAGGGGAGCATTCCAAGGGCCTGAAGCTGT...CAGAGTCTGGAAGCCTTCAAAGAGCAGGTTGCTGAGGAATCCAAAGTAGAAGCA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000160472.8 |
||
| CDS-3UTR CCA 90 bp | TTTCAGGGCAGCATCTCGACACTTCACTGCTTGGGCCAGTTCTTCCTCATTTTTTCTTCTTTGTCTCCGTaGCAATTTCCAGAGTGGCAG | + |
|
Preference number: 4 (lower is better) Translates to: FQGSISTLHCLGQFFLIFSSLSP*QFPEWQ Trigger: CTGCCACTCTGGAAATTGCCACGGAGACAAAGAAGA...AAAAATGAGGAAGAACTGGCCCAAGCAGTGAAGTGTCGAGATGCTGCCCTGAAA 48% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt. Matches the following 1 transcripts: ENSMUST00000160472.8 |
||
| CDS-3UTR CCA 90 bp | CAGCACACATCATGGTCTTCTAACGTAGAAACAGGCCAGCCCCACTTGCTGGCCGCTCTGAACACTTTTTaGAAAGCTGGTCATTCAAAA | + |
|
Preference number: 4 (lower is better) Translates to: QHTSWSSNVETGQPHLLAALNTF*KAGHSK Trigger: TTTTGAATGACCAGCTTTCCAAAAAGTGTTCAGAGC...GGCCAGCAAGTGGGGCTGGCCTGTTTCTACGTTAGAAGACCATGATGTGTGCTG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000027128.11 |
||
| CDS-3UTR CCA 90 bp | TCATCCTCTCCATGTTCTGTGCGTTATTTGCCTTGGCTGACAAGTGCAGCTTTACCTGTGATGCTGGCATaGGCTGCGTCTAACAGTAAA | + |
|
Preference number: 4 (lower is better) Translates to: SSSPCSVRYLPWLTSAALPVMLA*AASNSK Trigger: TTTACTGTTAGACGCAGCCCATGCCAGCATCACAGG...TAAAGCTGCACTTGTCAGCCAAGGCAAATAACGCACAGAACATGGAGAGGATGA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000160472.8 |
||
| CDS-3UTR CCA 90 bp | ATAAAGGACAAAGCCCAAAACCTTCAGCACACATCATGGTCTTCTAACGTAGAAATCCTGGCCTGCCACTaGTCCACTTCCGCTTCAAGC | + |
|
Preference number: 4 (lower is better) Translates to: IKDKAQNLQHTSWSSNVEILACH*STSASS Trigger: GCTTGAAGCGGAAGTGGACCAGTGGCAGGCCAGGAT...TTCTACGTTAGAAGACCATGATGTGTGCTGAAGGTTTTGGGCTTTGTCCTTTAT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000027128.11 ENSMUST00000163072.8 |
||
| CDS-3UTR CCA 90 bp | CAAAACCTTCAGCACACATCATGGTCTTCTAACGTAGAAACAGGCCAGCCCCACGTGCGTTATTTGCCTTaGCTGACAAGTGCAGCTTTA | + |
|
Preference number: 4 (lower is better) Translates to: QNLQHTSWSSNVETGQPHVRYLP*LTSAAL Trigger: TAAAGCTGCACTTGTCAGCCAAGGCAAATAACGCAC...GTGGGGCTGGCCTGTTTCTACGTTAGAAGACCATGATGTGTGCTGAAGGTTTTG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000027128.11 ENSMUST00000163072.8 |
||
| CDS-3UTR TCA 90 bp | AAAGCCCAAAACCTTCAGCACACATCATGGTCTTCTAACGTAGAAACAGGCCAGTCTGCTGAAGTACTGTaGACGTTTCAGAAGCTGTCC | + |
|
Preference number: 4 (lower is better) Translates to: KAQNLQHTSWSSNVETGQSAEVL*TFQKLS Trigger: GGACAGCTTCTGAAACGTTCACAGTACTTCAGCAGA...CTGGCCTGTTTCTACGTTAGAAGACCATGATGTGTGCTGAAGGTTTTGGGCTTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027128.11 |
||
| CDS-3UTR TCA 90 bp | TTCTGCAGTAATAGAAAAGAGTTCATAAAGGACAAAGCCCAAAACCTTCAGCACCTGACAAGCTTCTCCTaGGCCAGTTGTCGCCGTAGC | + |
|
Preference number: 4 (lower is better) Translates to: FCSNRKEFIKDKAQNLQHLTSFS*ASCRRS Trigger: GCTACGGCGACAACTGGCTCAGGAGAAGCTTGTCAG...GTGCTGAAGGTTTTGGGCTTTGTCCTTTATGAACTCTTTTCTATTACTGCAGAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000027128.11 |
||
| CDS-3UTR TCA 90 bp | CAAAACCTTCAGCACACATCATGGTCTTCTAACGTAGAAACAGGCCAGCCCCACCCACCAACTTGCAAATaGGGTTATCTCTGGAATTCA | + |
|
Preference number: 4 (lower is better) Translates to: QNLQHTSWSSNVETGQPHPPTCK*GYLWNS Trigger: TGAATTCCAGAGATAACCTCATTTGCAAGTTGGTGG...GTGGGGCTGGCCTGTTTCTACGTTAGAAGACCATGATGTGTGCTGAAGGTTTTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000027128.11 |
||
| CDS-3UTR TCA 90 bp | TGCTTCTACTTTGGATTCCTCAGCAACCTGCTCTTTGAAGGCTTCCAGACTCTGCTTCTCAGCCTCCTGTaGTTTCTGAAGACACTGATT | + |
|
Preference number: 4 (lower is better) Translates to: CFYFGFLSNLLFEGFQTLLLSLL*FLKTLI Trigger: AATCAGTGTCTTCAGAAATCACAGGAGGCTGAGAAG...CAGAGTCTGGAAGCCTTCAAAGAGCAGGTTGCTGAGGAATCCAAAGTAGAAGCA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000160472.8 |
||
| CDS-3UTR TCA 90 bp | AAAGCCCAAAACCTTCAGCACACATCATGGTCTTCTAACGTAGAAACAGGCCAGTTCATCTCTTTCAGGTaGGCTTCTGTCTGCTCCAGA | + |
|
Preference number: 4 (lower is better) Translates to: KAQNLQHTSWSSNVETGQFISFR*ASVCSR Trigger: TCTGGAGCAGACAGAAGCTCACCTGAAAGAGATGAA...CTGGCCTGTTTCTACGTTAGAAGACCATGATGTGTGCTGAAGGTTTTGGGCTTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027128.11 |
||
| CDS-3UTR TCA 90 bp | GACAAAGCCCAAAACCTTCAGCACACATCATGGTCTTCTAACGTAGAAACAGGCCATTTAAACCAGCGGTaGGCCTCTTCCAGATTAGCT | + |
|
Preference number: 4 (lower is better) Translates to: DKAQNLQHTSWSSNVETGHLNQR*ASSRLA Trigger: AGCTAATCTGGAAGAGGCTCACCGCTGGTTTAAATG...GCCTGTTTCTACGTTAGAAGACCATGATGTGTGCTGAAGGTTTTGGGCTTTGTC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000027128.11 ENSMUST00000163072.8 |
||
| CDS-3UTR GCA 90 bp | TGCTTCTACTTTGGATTCCTCAGCAACCTGCTCTTTGAAGGCTTCCAGACTCTGAGGTGTATCTGGAGTTaGGCCTTTTCATTCTGCACA | + |
|
Preference number: 4 (lower is better) Translates to: CFYFGFLSNLLFEGFQTLRCIWS*AFSFCT Trigger: TGTGCAGAATGAAAAGGCGCAACTCCAGATACACCT...CAGAGTCTGGAAGCCTTCAAAGAGCAGGTTGCTGAGGAATCCAAAGTAGAAGCA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000160472.8 |
||
| CDS-3UTR GCA 90 bp | GACAAAGCCCAAAACCTTCAGCACACATCATGGTCTTCTAACGTAGAAACAGGCGCCGCTCACGCTCTTTaGTTTCCAGTTTTTCTTGGA | + |
|
Preference number: 4 (lower is better) Translates to: DKAQNLQHTSWSSNVETGAAHAL*FPVFLG Trigger: TCCAAGAAAAACTGGAAAGCAAAGAGCGTGAGCGGC...GCCTGTTTCTACGTTAGAAGACCATGATGTGTGCTGAAGGTTTTGGGCTTTGTC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000027128.11 ENSMUST00000163072.8 |
||
| CDS-3UTR CCA 90 bp | TGCTTAGTTTCCCATCGATGTAGAACAGATTGGCTGGTTGCAACATTATGCATCGCTGTCCCATTGATGTaGGTTGGAGACAGGACTGGT | + |
|
Preference number: 4 (lower is better) Translates to: CLVSHRCRTDWLVATLCIAVPLM*VGDRTG Trigger: ACCAGTCCTGTCTCCAACCCACATCAATGGGACAGC...GATGCATAATGTTGCAACCAGCCAATCTGTTCTACATCGATGGGAAACTAAGCA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000160472.8 |
||
| CDS-3UTR CCA 90 bp | GACAAAGCCCAAAACCTTCAGCACACATCATGGTCTTCTAACGTAGAAACAGGCACAGCTTCAGGCCCTTaGAATGCTCCCCTTGTATTA | + |
|
Preference number: 4 (lower is better) Translates to: DKAQNLQHTSWSSNVETGTASGP*NAPLVL Trigger: TAATACAAGGGGAGCATTCCAAGGGCCTGAAGCTGT...GCCTGTTTCTACGTTAGAAGACCATGATGTGTGCTGAAGGTTTTGGGCTTTGTC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000027128.11 |
||
| CDS-3UTR CCA 90 bp | CAAAACCTTCAGCACACATCATGGTCTTCTAACGTAGAAACAGGCCAGCCCCACTGGCAATTTCCAGAGTaGCAGTCAATCTCTGCATTT | + |
|
Preference number: 4 (lower is better) Translates to: QNLQHTSWSSNVETGQPHWQFPE*QSISAF Trigger: AAATGCAGAGATTGACTGCCACTCTGGAAATTGCCA...GTGGGGCTGGCCTGTTTCTACGTTAGAAGACCATGATGTGTGCTGAAGGTTTTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000027128.11 |
||
| CDS-3UTR CCA 90 bp | TTTGGATTCCTCAGCAACCTGCTCTTTGAAGGCTTCCAGACTCTGCCGCTCACGTGTCGCCGTAGCTCTTaGATTTTAAGGTTCATTTTA | + |
|
Preference number: 4 (lower is better) Translates to: FGFLSNLLFEGFQTLPLTCRRSS*ILRFIL Trigger: TAAAATGAACCTTAAAATCCAAGAGCTACGGCGACA...CGTGAGCGGCAGAGTCTGGAAGCCTTCAAAGAGCAGGTTGCTGAGGAATCCAAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000160472.8 |
||
| CDS-3UTR CCA 90 bp | CTTCGTCAAGAGCTTTCTTCAGCTCAGAAACTTCCCTCTGTGATGCTTTCTTTGTGGGCCAGCAGGTCTTaGGTTGTTTTCATAGAGCTG | + |
|
Preference number: 4 (lower is better) Translates to: LRQELSSAQKLPSVMLSLWASRS*VVFIEL Trigger: CAGCTCTATGAAAACAACCCAAGACCTGCTGGCCCA...CAAAGAAAGCATCACAGAGGGAAGTTTCTGAGCTGAAGAAAGCTCTTGACGAAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000160472.8 |
||
| CDS-3UTR CCA 90 bp | GCATCATATCTTGATTCTCTTCCAGCCACCTGTCTTCCCGGGGAAGCCTCTGCAGCTCTGAACACTTTTTaGAAAGCTGGTCATTCAAAA | + |
|
Preference number: 4 (lower is better) Translates to: ASYLDSLPATCLPGEASAALNTF*KAGHSK Trigger: TTTTGAATGACCAGCTTTCCAAAAAGTGTTCAGAGC...TGCAGAGGCTTCCCCGGGAAGACAGGTGGCTGGAAGAGAATCAAGATATGATGC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000160472.8 |
||
| CDS-3UTR CCA 90 bp | ATTCCTTGCACCGATTTTCTAGTTCCAGCCTCATTTTTCTCTCAGCCACTAGTCTCATTCTGCACAGCTTaGAGCTCTCCTGTGATGCTG | + |
|
Preference number: 4 (lower is better) Translates to: IPCTDFLVPASFFSQPLVSFCTA*SSPVML Trigger: CAGCATCACAGGAGAGCTCCAAGCTGTGCAGAATGA...GACTAGTGGCTGAGAGAAAAATGAGGCTGGAACTAGAAAATCGGTGCAAGGAAT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000160472.8 |
||
| CDS-3UTR CCA 90 bp | GACAAAGCCCAAAACCTTCAGCACACATCATGGTCTTCTAACGTAGAAACAGGCCGACACTTCACTGCTTaGGCCAGTTCTTCCTCATTT | + |
|
Preference number: 4 (lower is better) Translates to: DKAQNLQHTSWSSNVETGRHFTA*ASSSSF Trigger: AAATGAGGAAGAACTGGCCCAAGCAGTGAAGTGTCG...GCCTGTTTCTACGTTAGAAGACCATGATGTGTGCTGAAGGTTTTGGGCTTTGTC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000027128.11 ENSMUST00000163072.8 |
||
| CDS-3UTR CCA 90 bp | TTCTGCAGTAATAGAAAAGAGTTCATAAAGGACAAAGCCCAAAACCTTCAGCACATCCTGGCCTGCCACTaGTCCACTTCCGCTTCAAGC | + |
|
Preference number: 4 (lower is better) Translates to: FCSNRKEFIKDKAQNLQHILACH*STSASS Trigger: GCTTGAAGCGGAAGTGGACCAGTGGCAGGCCAGGAT...GTGCTGAAGGTTTTGGGCTTTGTCCTTTATGAACTCTTTTCTATTACTGCAGAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000027128.11 ENSMUST00000163072.8 |
||
| CDS-3UTR CCA 90 bp | ATAAAGGACAAAGCCCAAAACCTTCAGCACACATCATGGTCTTCTAACGTAGAACCACAATCAGCATCCTaGCCTGCCACTGGTCCACTT | + |
|
Preference number: 4 (lower is better) Translates to: IKDKAQNLQHTSWSSNVEPQSAS*PATGPL Trigger: AAGTGGACCAGTGGCAGGCCAGGATGCTGATTGTGG...TTCTACGTTAGAAGACCATGATGTGTGCTGAAGGTTTTGGGCTTTGTCCTTTAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000027128.11 ENSMUST00000163072.8 |
||
| 3UTR CAA 72 bp | CTATTTGCTTCATCCTCTCCATGTTCTGTGCGTTATTaGCCTTGGCTGACAAGTGCAGCTTTATTTGGGCCC | + |
|
Preference number: 4 (lower is better) Translates to: LFASSSPCSVRY*PWLTSAALFGP Trigger: GGGCCCAAATAAAGCTGCACTTGTCAGCCAAGGCAAATAACGCACAGAACATGGAGAGGATGAAGCAAATAG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000160472.8 |
||
| CDS-3UTR TCA 90 bp | AAAGCCCAAAACCTTCAGCACACATCATGGTCTTCTAACGTAGAAACAGGCCAGTGTCTTCTTCCTCCTTaGCAACTTTCAATTGCTGGC | + |
|
Preference number: 4 (lower is better) Translates to: KAQNLQHTSWSSNVETGQCLLPP*QLSIAG Trigger: GCCAGCAATTGAAAGTTGTCAAGGAGGAAGAAGACA...CTGGCCTGTTTCTACGTTAGAAGACCATGATGTGTGCTGAAGGTTTTGGGCTTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027128.11 |
||
| CDS-3UTR TCA 90 bp | TGCTTCTACTTTGGATTCCTCAGCAACCTGCTCTTTGAAGGCTTCCAGACTCTGCCACCAACTTGCAAATaGGGTTATCTCTGGAATTCA | + |
|
Preference number: 4 (lower is better) Translates to: CFYFGFLSNLLFEGFQTLPPTCK*GYLWNS Trigger: TGAATTCCAGAGATAACCTCATTTGCAAGTTGGTGG...CAGAGTCTGGAAGCCTTCAAAGAGCAGGTTGCTGAGGAATCCAAAGTAGAAGCA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000160472.8 |
||
| CDS-3UTR TCA 90 bp | TCATCCTCTCCATGTTCTGTGCGTTATTTGCCTTGGCTGACAAGTGCAGCTTTATCAGAAGTGGCTTTGTaGTGTTCAAGGGAAGCCATT | + |
|
Preference number: 4 (lower is better) Translates to: SSSPCSVRYLPWLTSAALSEVAL*CSREAI Trigger: AATGGCTTCCCTTGAACATCACAAAGCCACTTCTGA...TAAAGCTGCACTTGTCAGCCAAGGCAAATAACGCACAGAACATGGAGAGGATGA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000160472.8 |
||
| CDS-3UTR TCA 90 bp | GAACATCTTACTGTGGCCATTTCACACAACACTAAATTCTTCCTGAAAACAGCACAGCAACCTGCTCTTTaGAGGCTTCCAGACTCTGCC | + |
|
Preference number: 4 (lower is better) Translates to: EHLTVAISHNTKFFLKTAQQPAL*RLPDSA Trigger: GGCAGAGTCTGGAAGCCTTCAAAGAGCAGGTTGCTG...TGCTGTTTTCAGGAAGAATTTAGTGTTGTGTGAAATGGCCACAGTAAGATGTTC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027128.11 |
||
| CDS-3UTR TCA 90 bp | AAAGCCCAAAACCTTCAGCACACATCATGGTCTTCTAACGTAGAAACAGGCCAGAGAAACTTCCCTCTGTaGTGCTTTCTTTGCAGTCTC | + |
|
Preference number: 4 (lower is better) Translates to: KAQNLQHTSWSSNVETGQRNFPL*CFLCSL Trigger: GAGACTGCAAAGAAAGCATCACAGAGGGAAGTTTCT...CTGGCCTGTTTCTACGTTAGAAGACCATGATGTGTGCTGAAGGTTTTGGGCTTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000027128.11 ENSMUST00000163072.8 |
||
| CDS-3UTR GCA 90 bp | TGCTTAGTTTCCCATCGATGTAGAACAGATTGGCTGGTTGCAACATTATGCATCTGCGCCTTTTCATTCTaGACAGCTTGGAGCTCTCCT | + |
|
Preference number: 4 (lower is better) Translates to: CLVSHRCRTDWLVATLCICAFSF*TAWSSP Trigger: AGGAGAGCTCCAAGCTGTGCAGAATGAAAAGGCGCA...GATGCATAATGTTGCAACCAGCCAATCTGTTCTACATCGATGGGAAACTAAGCA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000160472.8 |
||
| CDS-3UTR GCA 90 bp | CATCTAGAACATCTTACTGTGGCCATTTCACACAACACTAAATTCTTCCTGAAAATCAGCATCCTGGCCTaGCACTGGTCCACTTCCGCT | + |
|
Preference number: 4 (lower is better) Translates to: HLEHLTVAISHNTKFFLKISILA*HWSTSA Trigger: AGCGGAAGTGGACCAGTGGCAGGCCAGGATGCTGAT...TTTCAGGAAGAATTTAGTGTTGTGTGAAATGGCCACAGTAAGATGTTCTAGATG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027128.11 |
||
| CDS-3UTR GCA 90 bp | GACAAAGAGATGGGTTGGTTCTGCAGTAATAGAAAAGAGTTCATAAAGGACAAAATCAGCATCCTGGCCTaGCACTGGTCCACTTCCGCT | + |
|
Preference number: 4 (lower is better) Translates to: DKEMGWFCSNRKEFIKDKISILA*HWSTSA Trigger: AGCGGAAGTGGACCAGTGGCAGGCCAGGATGCTGAT...TTTGTCCTTTATGAACTCTTTTCTATTACTGCAGAACCAACCCATCTCTTTGTC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000027128.11 ENSMUST00000163072.8 |
||
| CDS-3UTR GCA 90 bp | AAAGCCCAAAACCTTCAGCACACATCATGGTCTTCTAACGTAGAAACAGGCCAGAGCTCCATCTCCTTCTaGAGGGTATTCATCTCAGAT | + |
|
Preference number: 4 (lower is better) Translates to: KAQNLQHTSWSSNVETGQSSISF*RVFISD Trigger: ATCTGAGATGAATACCCTGCAGAAGGAGATGGAGCT...CTGGCCTGTTTCTACGTTAGAAGACCATGATGTGTGCTGAAGGTTTTGGGCTTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000027128.11 ENSMUST00000163072.8 |
||
| CDS-3UTR CCA 90 bp | TTTCAGGGCAGCATCTCGACACTTCACTGCTTGGGCCAGTTCTTCCTCATTTTTTCCAGAAGTTCTTTTTaGACCACTGTCCTCTTCTCA | + |
|
Preference number: 4 (lower is better) Translates to: FQGSISTLHCLGQFFLIFSRSSF*TTVLFS Trigger: TGAGAAGAGGACAGTGGTCCAAAAAGAACTTCTGGA...AAAAATGAGGAAGAACTGGCCCAAGCAGTGAAGTGTCGAGATGCTGCCCTGAAA 46% GC, longest homopolymer 6 nt, total homopolymer stretches 11 nt. Matches the following 1 transcripts: ENSMUST00000160472.8 |
||
| 3UTR CAA 72 bp | TCTTCAGCTCAGAAACTTCCCTCTGTGATGCTTTCTTaGCAGTCTCTCTCTCGGTTTGAAACTGCTTCCTCA | + |
|
Preference number: 4 (lower is better) Translates to: SSAQKLPSVMLS*QSLSRFETASS Trigger: TGAGGAAGCAGTTTCAAACCGAGAGAGAGACTGCAAAGAAAGCATCACAGAGGGAAGTTTCTGAGCTGAAGA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000160472.8 |
||
| CDS-3UTR TCA 90 bp | GACAAAGCCCAAAACCTTCAGCACACATCATGGTCTTCTAACGTAGAAACAGGCGTTATTTGCCTTGGCTaGCAAGTGCAGCTTTATTTG | + |
|
Preference number: 4 (lower is better) Translates to: DKAQNLQHTSWSSNVETGVICLG*QVQLYL Trigger: CAAATAAAGCTGCACTTGTCAGCCAAGGCAAATAAC...GCCTGTTTCTACGTTAGAAGACCATGATGTGTGCTGAAGGTTTTGGGCTTTGTC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000027128.11 ENSMUST00000163072.8 |
||
| CDS-3UTR TCA 90 bp | AAAGCCCAAAACCTTCAGCACACATCATGGTCTTCTAACGTAGAAACAGGCCAGGTTATTTGCCTTGGCTaGCAAGTGCAGCTTTATTTG | + |
|
Preference number: 4 (lower is better) Translates to: KAQNLQHTSWSSNVETGQVICLG*QVQLYL Trigger: CAAATAAAGCTGCACTTGTCAGCCAAGGCAAATAAC...CTGGCCTGTTTCTACGTTAGAAGACCATGATGTGTGCTGAAGGTTTTGGGCTTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000027128.11 ENSMUST00000163072.8 |
||
| CDS-3UTR TCA 90 bp | GACAAAGCCCAAAACCTTCAGCACACATCATGGTCTTCTAACGTAGAAACAGGCTTATGCATCATATCTTaGTTCTCTTCCAGCCACCTG | + |
|
Preference number: 4 (lower is better) Translates to: DKAQNLQHTSWSSNVETGLCIIS*FSSSHL Trigger: CAGGTGGCTGGAAGAGAATCAAGATATGATGCATAA...GCCTGTTTCTACGTTAGAAGACCATGATGTGTGCTGAAGGTTTTGGGCTTTGTC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000027128.11 ENSMUST00000163072.8 |
||
| CDS-3UTR TCA 90 bp | CAAAACCTTCAGCACACATCATGGTCTTCTAACGTAGAAACAGGCCAGCCCCACTTTCCTTTACATTACTaGCATAAAACCGAGAGCCTT | + |
|
Preference number: 4 (lower is better) Translates to: QNLQHTSWSSNVETGQPHFPLHY*HKTESL Trigger: AAGGCTCTCGGTTTTATGTCAGTAATGTAAAGGAAA...GTGGGGCTGGCCTGTTTCTACGTTAGAAGACCATGATGTGTGCTGAAGGTTTTG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000163072.8 |
||
| CDS-3UTR GCA 90 bp | TGCTTCATCCTCTCCATGTTCTGTGCGTTATTTGCCTTGGCTGACAAGTGCAGCTTGACAACTTTCAATTaGTGGCGCAAATTCATCACT | + |
|
Preference number: 4 (lower is better) Translates to: CFILSMFCALFALADKCSLTTFN*WRKFIT Trigger: AGTGATGAATTTGCGCCAGCAATTGAAAGTTGTCAA...GCTGCACTTGTCAGCCAAGGCAAATAACGCACAGAACATGGAGAGGATGAAGCA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000160472.8 |
||
| CDS-3UTR GCA 90 bp | TTCTGCAGTAATAGAAAAGAGTTCATAAAGGACAAAGCCCAAAACCTTCAGCACTTCCTTCTTAAGGCCTaGGATCTCCGAATCCCTCCG | + |
|
Preference number: 4 (lower is better) Translates to: FCSNRKEFIKDKAQNLQHFLLKA*DLRIPP Trigger: CGGAGGGATTCGGAGATCGCAGGCCTTAAGAAGGAA...GTGCTGAAGGTTTTGGGCTTTGTCCTTTATGAACTCTTTTCTATTACTGCAGAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000027128.11 ENSMUST00000163072.8 |
||
| CDS-3UTR GCA 90 bp | ATAAAGGACAAAGCCCAAAACCTTCAGCACACATCATGGTCTTCTAACGTAGAATTTGTCTGGAGAGCTTaGTCTAGGCTCATGGCCAGT | + |
|
Preference number: 4 (lower is better) Translates to: IKDKAQNLQHTSWSSNVEFVWRA*SRLMAS Trigger: ACTGGCCATGAGCCTAGAGCAAGCTCTCCAGACAAA...TTCTACGTTAGAAGACCATGATGTGTGCTGAAGGTTTTGGGCTTTGTCCTTTAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000027128.11 ENSMUST00000163072.8 |
||
| CDS-3UTR GCA 90 bp | AAAGCCCAAAACCTTCAGCACACATCATGGTCTTCTAACGTAGAAACAGGCCAGCTCTGCATGCAATTCTaGTTCTACTTTGGATTCCTC | + |
|
Preference number: 4 (lower is better) Translates to: KAQNLQHTSWSSNVETGQLCMQF*FYFGFL Trigger: GAGGAATCCAAAGTAGAAGCAGAATTGCATGCAGAG...CTGGCCTGTTTCTACGTTAGAAGACCATGATGTGTGCTGAAGGTTTTGGGCTTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000027128.11 ENSMUST00000163072.8 |
||
| CDS-3UTR CCA 90 bp | GCTTCATCCTCTCCATGTTCTGTGCGTTATTTGCCTTGGCTGACAAGTGCAGCTATTACCTGGGCTTTCTaGACAAATTACTTCATTTGG | + |
|
Preference number: 4 (lower is better) Translates to: ASSSPCSVRYLPWLTSAAITWAF*TNYFIW Trigger: CCAAATGAAGTAATTTGTCCAGAAAGCCCAGGTAAT...AGCTGCACTTGTCAGCCAAGGCAAATAACGCACAGAACATGGAGAGGATGAAGC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000160472.8 |
||
| CDS-3UTR CCA 90 bp | TGCTTCATCCTCTCCATGTTCTGTGCGTTATTTGCCTTGGCTGACAAGTGCAGCTCATTTTACGCTTTGTaGTCTTTAGTTCCTCCTCAA | + |
|
Preference number: 4 (lower is better) Translates to: CFILSMFCALFALADKCSSFYAL*SLVPPQ Trigger: TTGAGGAGGAACTAAAGACCACAAAGCGTAAAATGA...GCTGCACTTGTCAGCCAAGGCAAATAACGCACAGAACATGGAGAGGATGAAGCA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000160472.8 |
||
| CDS-3UTR CCA 90 bp | ACATCGTACAAAATTCATCTAGAACATCTTACTGTGGCCATTTCACACAACACTCCACAATCAGCATCCTaGCCTGCCACTGGTCCACTT | + |
|
Preference number: 4 (lower is better) Translates to: TSYKIHLEHLTVAISHNTPQSAS*PATGPL Trigger: AAGTGGACCAGTGGCAGGCCAGGATGCTGATTGTGG...AGTGTTGTGTGAAATGGCCACAGTAAGATGTTCTAGATGAATTTTGTACGATGT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027128.11 |
||
| CDS-3UTR TCA 90 bp | CATCTAGAACATCTTACTGTGGCCATTTCACACAACACTAAATTCTTCCTGAAACAGAAGCTGTCCCATTaGTGTGGGTTGGAGACAGGA | + |
|
Preference number: 4 (lower is better) Translates to: HLEHLTVAISHNTKFFLKQKLSH*CGLETG Trigger: TCCTGTCTCCAACCCACATCAATGGGACAGCTTCTG...TTTCAGGAAGAATTTAGTGTTGTGTGAAATGGCCACAGTAAGATGTTCTAGATG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027128.11 |
||
| CDS-3UTR TCA 90 bp | CTTCCAATTCCTTGCACCGATTTTCTAGTTCCAGCCTCATTTTTCTCTCAGCCATCCATTTTAACAACCTaGAGCATGCTGGTTAGCTCT | + |
|
Preference number: 4 (lower is better) Translates to: LPIPCTDFLVPASFFSQPSILTT*SMLVSS Trigger: AGAGCTAACCAGCATGCTTCAGGTTGTTAAAATGGA...TGGCTGAGAGAAAAATGAGGCTGGAACTAGAAAATCGGTGCAAGGAATTGGAAG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000160472.8 |
||
| CDS-3UTR TCA 90 bp | TGCTTAGTTTCCCATCGATGTAGAACAGATTGGCTGGTTGCAACATTATGCATCCTTCTTCTCCTGCAATaGTGCTTTCAGTTCACCTTG | + |
|
Preference number: 4 (lower is better) Translates to: CLVSHRCRTDWLVATLCILLLLQ*CFQFTL Trigger: CAAGGTGAACTGAAAGCATCATTGCAGGAGAAGAAG...GATGCATAATGTTGCAACCAGCCAATCTGTTCTACATCGATGGGAAACTAAGCA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000160472.8 |
||
| CDS-3UTR GCA 90 bp | GTGTCAGAATGGTACTTCTGCTTAGTTTCCCATCGATGTAGAACAGATTGGCTGTTCAGGCCCTTGGAATaGTCCCCTTGTATTATATTC | + |
|
Preference number: 4 (lower is better) Translates to: VSEWYFCLVSHRCRTDWLFRPLE*SPCIIF Trigger: GAATATAATACAAGGGGAGCATTCCAAGGGCCTGAA...CAGCCAATCTGTTCTACATCGATGGGAAACTAAGCAGAAGTACCATTCTGACAC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000160472.8 |
||
| CDS-3UTR GCA 90 bp | GACAAAGAGATGGGTTGGTTCTGCAGTAATAGAAAAGAGTTCATAAAGGACAAATTCCTTCTTAAGGCCTaGGATCTCCGAATCCCTCCG | + |
|
Preference number: 4 (lower is better) Translates to: DKEMGWFCSNRKEFIKDKFLLKA*DLRIPP Trigger: CGGAGGGATTCGGAGATCGCAGGCCTTAAGAAGGAA...TTTGTCCTTTATGAACTCTTTTCTATTACTGCAGAACCAACCCATCTCTTTGTC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000027128.11 ENSMUST00000163072.8 |
||
| CDS-3UTR GCA 90 bp | TTCTGCAGTAATAGAAAAGAGTTCATAAAGGACAAAGCCCAAAACCTTCAGCACTTTGTCTGGAGAGCTTaGTCTAGGCTCATGGCCAGT | + |
|
Preference number: 4 (lower is better) Translates to: FCSNRKEFIKDKAQNLQHFVWRA*SRLMAS Trigger: ACTGGCCATGAGCCTAGAGCAAGCTCTCCAGACAAA...GTGCTGAAGGTTTTGGGCTTTGTCCTTTATGAACTCTTTTCTATTACTGCAGAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000027128.11 ENSMUST00000163072.8 |
||
| CDS-3UTR CCA 90 bp | ATTCCTTGCACCGATTTTCTAGTTCCAGCCTCATTTTTCTCTCAGCCACTAGTCCCTCCACAAATTACCTaGGCTTTCTGGACAAATTAC | + |
|
Preference number: 4 (lower is better) Translates to: IPCTDFLVPASFFSQPLVPPQIT*AFWTNY Trigger: GTAATTTGTCCAGAAAGCCCAGGTAATTTGTGGAGG...GACTAGTGGCTGAGAGAAAAATGAGGCTGGAACTAGAAAATCGGTGCAAGGAAT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000160472.8 |
||
| CDS-3UTR CCA 90 bp | AGGTCACTTCTTCCTCTCTGTGTCAGAATGGTACTTCTGCTTAGTTTCCCATCGCACTTTTTGGAAAGCTaGTCATTCAAAACCTGTGCT | + |
|
Preference number: 4 (lower is better) Translates to: RSLLPLCVRMVLLLSFPSHFLES*SFKTCA Trigger: AGCACAGGTTTTGAATGACCAGCTTTCCAAAAAGTG...CGATGGGAAACTAAGCAGAAGTACCATTCTGACACAGAGAGGAAGAAGTGACCT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000160472.8 |
||
| CDS-3UTR CCA 90 bp | CTTCCAATTCCTTGCACCGATTTTCTAGTTCCAGCCTCATTTTTCTCTCAGCCACAACCTGAAGCATGCTaGTTAGCTCTGAACACTTTT | + |
|
Preference number: 4 (lower is better) Translates to: LPIPCTDFLVPASFFSQPQPEAC*LALNTF Trigger: AAAAGTGTTCAGAGCTAACCAGCATGCTTCAGGTTG...TGGCTGAGAGAAAAATGAGGCTGGAACTAGAAAATCGGTGCAAGGAATTGGAAG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000160472.8 |
||
| CDS-3UTR CCA 90 bp | ATAAAGGACAAAGCCCAAAACCTTCAGCACACATCATGGTCTTCTAACGTAGAAGGTCCTTCTGCAGCATaGTTTCAGCGAATGTGTGAA | + |
|
Preference number: 4 (lower is better) Translates to: IKDKAQNLQHTSWSSNVEGPSAA*FQRMCE Trigger: TTCACACATTCGCTGAAACCATGCTGCAGAAGGACC...TTCTACGTTAGAAGACCATGATGTGTGCTGAAGGTTTTGGGCTTTGTCCTTTAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027128.11 |
||
| CDS-3UTR CCA 90 bp | CAGAGAACATCGTACAAAATTCATCTAGAACATCTTACTGTGGCCATTTCACACTCCCCTTTCAACTTCTaGCTCTCTTTCAGGGCAGCA | + |
|
Preference number: 4 (lower is better) Translates to: QRTSYKIHLEHLTVAISHSPFNF*LSFRAA Trigger: TGCTGCCCTGAAAGAGAGCCAGAAGTTGAAAGGGGA...GTGTGAAATGGCCACAGTAAGATGTTCTAGATGAATTTTGTACGATGTTCTCTG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000027128.11 |
||
| CDS-3UTR CCA 90 bp | CAGAGAACATCGTACAAAATTCATCTAGAACATCTTACTGTGGCCATTTCACACAGATGGCCATTTGTCTaGAGAGCTTGCTCTAGGCTC | + |
|
Preference number: 4 (lower is better) Translates to: QRTSYKIHLEHLTVAISHRWPFV*RACSRL Trigger: GAGCCTAGAGCAAGCTCTCCAGACAAATGGCCATCT...GTGTGAAATGGCCACAGTAAGATGTTCTAGATGAATTTTGTACGATGTTCTCTG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027128.11 |
||
| CDS-3UTR CCA 90 bp | TTCTGCAGTAATAGAAAAGAGTTCATAAAGGACAAAGCCCAAAACCTTCAGCACAGATGGCCATTTGTCTaGAGAGCTTGCTCTAGGCTC | + |
|
Preference number: 4 (lower is better) Translates to: FCSNRKEFIKDKAQNLQHRWPFV*RACSRL Trigger: GAGCCTAGAGCAAGCTCTCCAGACAAATGGCCATCT...GTGCTGAAGGTTTTGGGCTTTGTCCTTTATGAACTCTTTTCTATTACTGCAGAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000027128.11 ENSMUST00000163072.8 |
||
| CDS-3UTR CCA 90 bp | AAAGCCCAAAACCTTCAGCACACATCATGGTCTTCTAACGTAGAAACAGGCCAGGTAGAACAGATTGGCTaGTTGCAACATTATGCATCA | + |
|
Preference number: 4 (lower is better) Translates to: KAQNLQHTSWSSNVETGQVEQIG*LQHYAS Trigger: TGATGCATAATGTTGCAACCAGCCAATCTGTTCTAC...CTGGCCTGTTTCTACGTTAGAAGACCATGATGTGTGCTGAAGGTTTTGGGCTTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000027128.11 ENSMUST00000163072.8 |
||
| CDS-3UTR TCA 90 bp | ACATCGTACAAAATTCATCTAGAACATCTTACTGTGGCCATTTCACACAACACTTTCTGCCTCCACCACTaGCCCCATCTCTTGTACTTT | + |
|
Preference number: 4 (lower is better) Translates to: TSYKIHLEHLTVAISHNTFCLHH*PHLLYF Trigger: AAAGTACAAGAGATGGGGTCAGTGGTGGAGGCAGAA...AGTGTTGTGTGAAATGGCCACAGTAAGATGTTCTAGATGAATTTTGTACGATGT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000027128.11 |
||
| CDS-3UTR TCA 90 bp | TTCCAGAGAACATCGTACAAAATTCATCTAGAACATCTTACTGTGGCCATTTCACCCTGCATCTTACTGTaGGAAGCCAGCACATTTTCC | + |
|
Preference number: 4 (lower is better) Translates to: FQRTSYKIHLEHLTVAISPCILL*EASTFS Trigger: GGAAAATGTGCTGGCTTCTCACAGTAAGATGCAGGG...TGAAATGGCCACAGTAAGATGTTCTAGATGAATTTTGTACGATGTTCTCTGGAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000027128.11 |
||
| CDS-3UTR TCA 90 bp | ACATCGTACAAAATTCATCTAGAACATCTTACTGTGGCCATTTCACACAACACTGTCTCTCTCTCGGTTTaGAACTGCTTCCTCAGAGCT | + |
|
Preference number: 4 (lower is better) Translates to: TSYKIHLEHLTVAISHNTVSLSV*NCFLRA Trigger: AGCTCTGAGGAAGCAGTTTCAAACCGAGAGAGAGAC...AGTGTTGTGTGAAATGGCCACAGTAAGATGTTCTAGATGAATTTTGTACGATGT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027128.11 |
||
| CDS-3UTR TCA 90 bp | GACAAAGAGATGGGTTGGTTCTGCAGTAATAGAAAAGAGTTCATAAAGGACAAAGTCTCTCTCTCGGTTTaGAACTGCTTCCTCAGAGCT | + |
|
Preference number: 4 (lower is better) Translates to: DKEMGWFCSNRKEFIKDKVSLSV*NCFLRA Trigger: AGCTCTGAGGAAGCAGTTTCAAACCGAGAGAGAGAC...TTTGTCCTTTATGAACTCTTTTCTATTACTGCAGAACCAACCCATCTCTTTGTC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000027128.11 ENSMUST00000163072.8 |
||
| CDS-3UTR GCA 90 bp | TGCTTAGTTTCCCATCGATGTAGAACAGATTGGCTGGTTGCAACATTATGCATCACTGTAGTTTCCATTTaGACCCCTGATTCATCCAAC | + |
|
Preference number: 4 (lower is better) Translates to: CLVSHRCRTDWLVATLCITVVSI*TPDSSN Trigger: GTTGGATGAATCAGGGGTGCAAATGGAAACTACAGT...GATGCATAATGTTGCAACCAGCCAATCTGTTCTACATCGATGGGAAACTAAGCA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000160472.8 |
||
| CDS-3UTR GCA 90 bp | ATAAAGGACAAAGCCCAAAACCTTCAGCACACATCATGGTCTTCTAACGTAGAAAGCTCCATCTCCTTCTaGAGGGTATTCATCTCAGAT | + |
|
Preference number: 4 (lower is better) Translates to: IKDKAQNLQHTSWSSNVESSISF*RVFISD Trigger: ATCTGAGATGAATACCCTGCAGAAGGAGATGGAGCT...TTCTACGTTAGAAGACCATGATGTGTGCTGAAGGTTTTGGGCTTTGTCCTTTAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000027128.11 ENSMUST00000163072.8 |
||
| CDS-3UTR CCA 90 bp | GAACATCTTACTGTGGCCATTTCACACAACACTAAATTCTTCCTGAAAACAGCATCTTCTTTGTCTCCGTaGCAATTTCCAGAGTGGCAG | + |
|
Preference number: 4 (lower is better) Translates to: EHLTVAISHNTKFFLKTASSLSP*QFPEWQ Trigger: CTGCCACTCTGGAAATTGCCACGGAGACAAAGAAGA...TGCTGTTTTCAGGAAGAATTTAGTGTTGTGTGAAATGGCCACAGTAAGATGTTC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027128.11 |
||
| CDS-3UTR CCA 90 bp | AAAGCCCAAAACCTTCAGCACACATCATGGTCTTCTAACGTAGAAACAGGCCAGTGTCGCCGTAGCTCTTaGATTTTAAGGTTCATTTTA | + |
|
Preference number: 4 (lower is better) Translates to: KAQNLQHTSWSSNVETGQCRRSS*ILRFIL Trigger: TAAAATGAACCTTAAAATCCAAGAGCTACGGCGACA...CTGGCCTGTTTCTACGTTAGAAGACCATGATGTGTGCTGAAGGTTTTGGGCTTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000027128.11 |
||
| CDS-3UTR CCA 90 bp | ACATCGTACAAAATTCATCTAGAACATCTTACTGTGGCCATTTCACACAACACTTGGGCCAGCAGGTCTTaGGTTGTTTTCATAGAGCTG | + |
|
Preference number: 4 (lower is better) Translates to: TSYKIHLEHLTVAISHNTWASRS*VVFIEL Trigger: CAGCTCTATGAAAACAACCCAAGACCTGCTGGCCCA...AGTGTTGTGTGAAATGGCCACAGTAAGATGTTCTAGATGAATTTTGTACGATGT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000027128.11 |
||
| CDS-3UTR CCA 90 bp | AACATCGTACAAAATTCATCTAGAACATCTTACTGTGGCCATTTCACACAACACTCATTCTGCACAGCTTaGAGCTCTCCTGTGATGCTG | + |
|
Preference number: 4 (lower is better) Translates to: NIVQNSSRTSYCGHFTQHSFCTA*SSPVML Trigger: CAGCATCACAGGAGAGCTCCAAGCTGTGCAGAATGA...GTGTTGTGTGAAATGGCCACAGTAAGATGTTCTAGATGAATTTTGTACGATGTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027128.11 |
||
| 3UTR CAA 72 bp | CATCTCTTCAGGTGTCTGATAGTTTCTTCCAATTCCTaGCACCGATTTTCTAGTTCCAGCCTCATTTTTCTC | + |
|
Preference number: 4 (lower is better) Translates to: HLFRCLIVSSNS*HRFSSSSLIFL Trigger: GAGAAAAATGAGGCTGGAACTAGAAAATCGGTGCAAGGAATTGGAAGAAACTATCAGACACCTGAAGAGATG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000160472.8 |
||
| CDS-3UTR TCA 90 bp | TTCTGCAGTAATAGAAAAGAGTTCATAAAGGACAAAGCCCAAAACCTTCAGCACTCTTCAAGGACTGAATaGGGTTCTCCAAGTAGCACA | + |
|
Preference number: 4 (lower is better) Translates to: FCSNRKEFIKDKAQNLQHSSRTE*GSPSST Trigger: TGTGCTACTTGGAGAACCTCATTCAGTCCTTGAAGA...GTGCTGAAGGTTTTGGGCTTTGTCCTTTATGAACTCTTTTCTATTACTGCAGAA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000027128.11 |
||
| CDS-3UTR TCA 90 bp | TTCTGCAGTAATAGAAAAGAGTTCATAAAGGACAAAGCCCAAAACCTTCAGCACAGAAACTTCCCTCTGTaGTGCTTTCTTTGCAGTCTC | + |
|
Preference number: 4 (lower is better) Translates to: FCSNRKEFIKDKAQNLQHRNFPL*CFLCSL Trigger: GAGACTGCAAAGAAAGCATCACAGAGGGAAGTTTCT...GTGCTGAAGGTTTTGGGCTTTGTCCTTTATGAACTCTTTTCTATTACTGCAGAA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000027128.11 ENSMUST00000163072.8 |
||
| CDS-3UTR TCA 90 bp | GAACATCTTACTGTGGCCATTTCACACAACACTAAATTCTTCCTGAAAACAGCAAGCTGTTATCTGTTCTaGCTCCACACTGGCTTCTTT | + |
|
Preference number: 4 (lower is better) Translates to: EHLTVAISHNTKFFLKTASCYLF*LHTGFF Trigger: AAAGAAGCCAGTGTGGAGTCAGAACAGATAACAGCT...TGCTGTTTTCAGGAAGAATTTAGTGTTGTGTGAAATGGCCACAGTAAGATGTTC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027128.11 |
||
| CDS-3UTR GCA 90 bp | GAACATCTTACTGTGGCCATTTCACACAACACTAAATTCTTCCTGAAAACAGCATTCATCACTTCAAGTTaGAACAGCTTCAGGCCCTTG | + |
|
Preference number: 4 (lower is better) Translates to: EHLTVAISHNTKFFLKTAFITSS*NSFRPL Trigger: CAAGGGCCTGAAGCTGTTGCAACTTGAAGTGATGAA...TGCTGTTTTCAGGAAGAATTTAGTGTTGTGTGAAATGGCCACAGTAAGATGTTC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027128.11 |
||
| CDS-3UTR GCA 90 bp | AACATCGTACAAAATTCATCTAGAACATCTTACTGTGGCCATTTCACACAACACGAGGAGCATGGACGATaGAGATGTCTCAAGAGATTC | + |
|
Preference number: 4 (lower is better) Translates to: NIVQNSSRTSYCGHFTQHEEHGR*RCLKRF Trigger: GAATCTCTTGAGACATCTGCATCGTCCATGCTCCTC...GTGTTGTGTGAAATGGCCACAGTAAGATGTTCTAGATGAATTTTGTACGATGTT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027128.11 |
||
| CDS-3UTR GCA 90 bp | TTCCAGAGAACATCGTACAAAATTCATCTAGAACATCTTACTGTGGCCATTTCAAGATCAGACTTGAGCTaGGAGATAGTCATCCCCAAG | + |
|
Preference number: 4 (lower is better) Translates to: FQRTSYKIHLEHLTVAISRSDLS*EIVIPK Trigger: CTTGGGGATGACTATCTCGCAGCTCAAGTCTGATCT...TGAAATGGCCACAGTAAGATGTTCTAGATGAATTTTGTACGATGTTCTCTGGAA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000027128.11 |
||
| CDS-3UTR CCA 90 bp | ACATCGTACAAAATTCATCTAGAACATCTTACTGTGGCCATTTCACACAACACTCGACACTTCACTGCTTaGGCCAGTTCTTCCTCATTT | + |
|
Preference number: 4 (lower is better) Translates to: TSYKIHLEHLTVAISHNTRHFTA*ASSSSF Trigger: AAATGAGGAAGAACTGGCCCAAGCAGTGAAGTGTCG...AGTGTTGTGTGAAATGGCCACAGTAAGATGTTCTAGATGAATTTTGTACGATGT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027128.11 |
||
| CDS-3UTR CCA 90 bp | ACATCGTACAAAATTCATCTAGAACATCTTACTGTGGCCATTTCACACAACACTAGCTTTGACTGCAGATaGCCATTTGTCTGGAGAGCT | + |
|
Preference number: 4 (lower is better) Translates to: TSYKIHLEHLTVAISHNTSFDCR*PFVWRA Trigger: AGCTCTCCAGACAAATGGCCATCTGCAGTCAAAGCT...AGTGTTGTGTGAAATGGCCACAGTAAGATGTTCTAGATGAATTTTGTACGATGT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027128.11 |
||
| CDS-3UTR TCA 90 bp | ACATCGTACAAAATTCATCTAGAACATCTTACTGTGGCCATTTCACACAACACTCTTCTTCTCCTGCAATaGTGCTTTCAGTTCACCTTG | + |
|
Preference number: 4 (lower is better) Translates to: TSYKIHLEHLTVAISHNTLLLLQ*CFQFTL Trigger: CAAGGTGAACTGAAAGCATCATTGCAGGAGAAGAAG...AGTGTTGTGTGAAATGGCCACAGTAAGATGTTCTAGATGAATTTTGTACGATGT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027128.11 |
||
| CDS-3UTR TCA 90 bp | CATCTAGAACATCTTACTGTGGCCATTTCACACAACACTAAATTCTTCCTGAAATCAGAAGTGGCTTTGTaGTGTTCAAGGGAAGCCATT | + |
|
Preference number: 4 (lower is better) Translates to: HLEHLTVAISHNTKFFLKSEVAL*CSREAI Trigger: AATGGCTTCCCTTGAACATCACAAAGCCACTTCTGA...TTTCAGGAAGAATTTAGTGTTGTGTGAAATGGCCACAGTAAGATGTTCTAGATG 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027128.11 |
||
| CDS-3UTR TCA 90 bp | ATAAAGGACAAAGCCCAAAACCTTCAGCACACATCATGGTCTTCTAACGTAGAATCTGCTAATTGTTTCTaGAAGTTTCCCACCTTCTTG | + |
|
Preference number: 4 (lower is better) Translates to: IKDKAQNLQHTSWSSNVESANCF*KFPTFL Trigger: CAAGAAGGTGGGAAACTTTCAGAAACAATTAGCAGA...TTCTACGTTAGAAGACCATGATGTGTGCTGAAGGTTTTGGGCTTTGTCCTTTAT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000027128.11 ENSMUST00000163072.8 |
||
| CDS-3UTR GCA 90 bp | TTCCAGAGAACATCGTACAAAATTCATCTAGAACATCTTACTGTGGCCATTTCAAGGTGTATCTGGAGTTaGGCCTTTTCATTCTGCACA | + |
|
Preference number: 4 (lower is better) Translates to: FQRTSYKIHLEHLTVAISRCIWS*AFSFCT Trigger: TGTGCAGAATGAAAAGGCGCAACTCCAGATACACCT...TGAAATGGCCACAGTAAGATGTTCTAGATGAATTTTGTACGATGTTCTCTGGAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000027128.11 |
||
| CDS-3UTR GCA 90 bp | CATCTAGAACATCTTACTGTGGCCATTTCACACAACACTAAATTCTTCCTGAAATGTAGATGGTCCTTCTaGAGCATGGTTTCAGCGAAT | + |
|
Preference number: 4 (lower is better) Translates to: HLEHLTVAISHNTKFFLKCRWSF*SMVSAN Trigger: ATTCGCTGAAACCATGCTGCAGAAGGACCATCTACA...TTTCAGGAAGAATTTAGTGTTGTGTGAAATGGCCACAGTAAGATGTTCTAGATG 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027128.11 |
||
| CDS-3UTR CCA 90 bp | AACATCGTACAAAATTCATCTAGAACATCTTACTGTGGCCATTTCACACAACACCATCTCTCAGAGAGCTaGTCTGTTCCTCAACTATTC | + |
|
Preference number: 4 (lower is better) Translates to: NIVQNSSRTSYCGHFTQHHLSES*SVPQLF Trigger: GAATAGTTGAGGAACAGACCAGCTCTCTGAGAGATG...GTGTTGTGTGAAATGGCCACAGTAAGATGTTCTAGATGAATTTTGTACGATGTT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027128.11 |
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| CDS-3UTR CCA 90 bp | CAGAGAACATCGTACAAAATTCATCTAGAACATCTTACTGTGGCCATTTCACACCCTCCACAAATTACCTaGGCTTTCTGGACAAATTAC | + |
|
Preference number: 4 (lower is better) Translates to: QRTSYKIHLEHLTVAISHPPQIT*AFWTNY Trigger: GTAATTTGTCCAGAAAGCCCAGGTAATTTGTGGAGG...GTGTGAAATGGCCACAGTAAGATGTTCTAGATGAATTTTGTACGATGTTCTCTG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027128.11 |
||
| CDS-3UTR CCA 90 bp | ATAAAGGACAAAGCCCAAAACCTTCAGCACACATCATGGTCTTCTAACGTAGAACACTTTTTGGAAAGCTaGTCATTCAAAACCTGTGCT | + |
|
Preference number: 4 (lower is better) Translates to: IKDKAQNLQHTSWSSNVEHFLES*SFKTCA Trigger: AGCACAGGTTTTGAATGACCAGCTTTCCAAAAAGTG...TTCTACGTTAGAAGACCATGATGTGTGCTGAAGGTTTTGGGCTTTGTCCTTTAT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000027128.11 |
||
| CDS-3UTR CCA 90 bp | GAACATCTTACTGTGGCCATTTCACACAACACTAAATTCTTCCTGAAAACAGCACAACCTGAAGCATGCTaGTTAGCTCTGAACACTTTT | + |
|
Preference number: 4 (lower is better) Translates to: EHLTVAISHNTKFFLKTAQPEAC*LALNTF Trigger: AAAAGTGTTCAGAGCTAACCAGCATGCTTCAGGTTG...TGCTGTTTTCAGGAAGAATTTAGTGTTGTGTGAAATGGCCACAGTAAGATGTTC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027128.11 |
||
| CDS-3UTR CCA 90 bp | GAACATCTTACTGTGGCCATTTCACACAACACTAAATTCTTCCTGAAAACAGCATCCAGAAGTTCTTTTTaGACCACTGTCCTCTTCTCA | + |
|
Preference number: 4 (lower is better) Translates to: EHLTVAISHNTKFFLKTASRSSF*TTVLFS Trigger: TGAGAAGAGGACAGTGGTCCAAAAAGAACTTCTGGA...TGCTGTTTTCAGGAAGAATTTAGTGTTGTGTGAAATGGCCACAGTAAGATGTTC 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000027128.11 |
||
| CDS-3UTR CCA 90 bp | TTCTGCAGTAATAGAAAAGAGTTCATAAAGGACAAAGCCCAAAACCTTCAGCACATTCTGCTTCTACTTTaGATTCCTCAGCAACCTGCT | + |
|
Preference number: 4 (lower is better) Translates to: FCSNRKEFIKDKAQNLQHILLLL*IPQQPA Trigger: AGCAGGTTGCTGAGGAATCCAAAGTAGAAGCAGAAT...GTGCTGAAGGTTTTGGGCTTTGTCCTTTATGAACTCTTTTCTATTACTGCAGAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000027128.11 ENSMUST00000163072.8 |
||
| CDS-3UTR TCA 90 bp | CATCTAGAACATCTTACTGTGGCCATTTCACACAACACTAAATTCTTCCTGAAATCCATTTTAACAACCTaGAGCATGCTGGTTAGCTCT | + |
|
Preference number: 4 (lower is better) Translates to: HLEHLTVAISHNTKFFLKSILTT*SMLVSS Trigger: AGAGCTAACCAGCATGCTTCAGGTTGTTAAAATGGA...TTTCAGGAAGAATTTAGTGTTGTGTGAAATGGCCACAGTAAGATGTTCTAGATG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027128.11 |
||
| CDS-3UTR TCA 90 bp | GACAAAGAGATGGGTTGGTTCTGCAGTAATAGAAAAGAGTTCATAAAGGACAAATTATGCATCATATCTTaGTTCTCTTCCAGCCACCTG | + |
|
Preference number: 4 (lower is better) Translates to: DKEMGWFCSNRKEFIKDKLCIIS*FSSSHL Trigger: CAGGTGGCTGGAAGAGAATCAAGATATGATGCATAA...TTTGTCCTTTATGAACTCTTTTCTATTACTGCAGAACCAACCCATCTCTTTGTC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000027128.11 ENSMUST00000163072.8 |
||
| CDS-3UTR GCA 90 bp | TTCCAGAGAACATCGTACAAAATTCATCTAGAACATCTTACTGTGGCCATTTCATTCAGGCCCTTGGAATaGTCCCCTTGTATTATATTC | + |
|
Preference number: 4 (lower is better) Translates to: FQRTSYKIHLEHLTVAISFRPLE*SPCIIF Trigger: GAATATAATACAAGGGGAGCATTCCAAGGGCCTGAA...TGAAATGGCCACAGTAAGATGTTCTAGATGAATTTTGTACGATGTTCTCTGGAA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000027128.11 |
||
| CDS-3UTR GCA 90 bp | TTCCAGAGAACATCGTACAAAATTCATCTAGAACATCTTACTGTGGCCATTTCACTCTGCATGCAATTCTaGTTCTACTTTGGATTCCTC | + |
|
Preference number: 4 (lower is better) Translates to: FQRTSYKIHLEHLTVAISLCMQF*FYFGFL Trigger: GAGGAATCCAAAGTAGAAGCAGAATTGCATGCAGAG...TGAAATGGCCACAGTAAGATGTTCTAGATGAATTTTGTACGATGTTCTCTGGAA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027128.11 |
||
| CDS-3UTR GCA 90 bp | GACAAAGAGATGGGTTGGTTCTGCAGTAATAGAAAAGAGTTCATAAAGGACAAATCAATGCGCTCTGCATaGAATTCTGCTTCTACTTTG | + |
|
Preference number: 4 (lower is better) Translates to: DKEMGWFCSNRKEFIKDKSMRSA*NSASTL Trigger: CAAAGTAGAAGCAGAATTGCATGCAGAGCGCATTGA...TTTGTCCTTTATGAACTCTTTTCTATTACTGCAGAACCAACCCATCTCTTTGTC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000027128.11 ENSMUST00000163072.8 |
||
| CDS-3UTR GCA 90 bp | ATAAAGGACAAAGCCCAAAACCTTCAGCACACATCATGGTCTTCTAACGTAGAAATACAAATCTCTGGATaGTCAAGGACTGTTCATAGT | + |
|
Preference number: 4 (lower is better) Translates to: IKDKAQNLQHTSWSSNVEIQISG*SRTVHS Trigger: ACTATGAACAGTCCTTGAGCATCCAGAGATTTGTAT...TTCTACGTTAGAAGACCATGATGTGTGCTGAAGGTTTTGGGCTTTGTCCTTTAT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000027128.11 ENSMUST00000163072.8 |
||
| CDS-3UTR CCA 90 bp | ATAAAGGACAAAGCCCAAAACCTTCAGCACACATCATGGTCTTCTAACGTAGAAATTACCTGGGCTTTCTaGACAAATTACTTCATTTGG | + |
|
Preference number: 4 (lower is better) Translates to: IKDKAQNLQHTSWSSNVEITWAF*TNYFIW Trigger: CCAAATGAAGTAATTTGTCCAGAAAGCCCAGGTAAT...TTCTACGTTAGAAGACCATGATGTGTGCTGAAGGTTTTGGGCTTTGTCCTTTAT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027128.11 |
||
| CDS-3UTR CCA 90 bp | CATCTAGAACATCTTACTGTGGCCATTTCACACAACACTAAATTCTTCCTGAAAATTCTGCTTCTACTTTaGATTCCTCAGCAACCTGCT | + |
|
Preference number: 4 (lower is better) Translates to: HLEHLTVAISHNTKFFLKILLLL*IPQQPA Trigger: AGCAGGTTGCTGAGGAATCCAAAGTAGAAGCAGAAT...TTTCAGGAAGAATTTAGTGTTGTGTGAAATGGCCACAGTAAGATGTTCTAGATG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027128.11 |
||
| CDS-3UTR CCA 90 bp | ATAAAGGACAAAGCCCAAAACCTTCAGCACACATCATGGTCTTCTAACGTAGAATTTATTTGGGCCCTTTaGTTCTTGAGTTTTTCCTTG | + |
|
Preference number: 4 (lower is better) Translates to: IKDKAQNLQHTSWSSNVEFIWAL*FLSFSL Trigger: CAAGGAAAAACTCAAGAACCAAAGGGCCCAAATAAA...TTCTACGTTAGAAGACCATGATGTGTGCTGAAGGTTTTGGGCTTTGTCCTTTAT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000027128.11 ENSMUST00000163072.8 |
||
| CDS-3UTR TCA 90 bp | ACATCGTACAAAATTCATCTAGAACATCTTACTGTGGCCATTTCACACAACACTAGCTCTGAGTTTGCCTaGGTATATTTGACCTCTAAA | + |
|
Preference number: 4 (lower is better) Translates to: TSYKIHLEHLTVAISHNTSSEFA*VYLTSK Trigger: TTTAGAGGTCAAATATACTCAGGCAAACTCAGAGCT...AGTGTTGTGTGAAATGGCCACAGTAAGATGTTCTAGATGAATTTTGTACGATGT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027128.11 |
||
| CDS-3UTR TCA 90 bp | GACAAAGAGATGGGTTGGTTCTGCAGTAATAGAAAAGAGTTCATAAAGGACAAATCTGCTAATTGTTTCTaGAAGTTTCCCACCTTCTTG | + |
|
Preference number: 4 (lower is better) Translates to: DKEMGWFCSNRKEFIKDKSANCF*KFPTFL Trigger: CAAGAAGGTGGGAAACTTTCAGAAACAATTAGCAGA...TTTGTCCTTTATGAACTCTTTTCTATTACTGCAGAACCAACCCATCTCTTTGTC 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000027128.11 ENSMUST00000163072.8 |
||
| CDS-3UTR GCA 90 bp | CAGAGAACATCGTACAAAATTCATCTAGAACATCTTACTGTGGCCATTTCACACTTGACAACTTTCAATTaGTGGCGCAAATTCATCACT | + |
|
Preference number: 4 (lower is better) Translates to: QRTSYKIHLEHLTVAISHLTTFN*WRKFIT Trigger: AGTGATGAATTTGCGCCAGCAATTGAAAGTTGTCAA...GTGTGAAATGGCCACAGTAAGATGTTCTAGATGAATTTTGTACGATGTTCTCTG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027128.11 |
||
| CDS-3UTR GCA 90 bp | GACAAAGAGATGGGTTGGTTCTGCAGTAATAGAAAAGAGTTCATAAAGGACAAACAAGAATGTCTATTTTaGCTTCTAGTCTTCCCTCCA | + |
|
Preference number: 4 (lower is better) Translates to: DKEMGWFCSNRKEFIKDKQECLF*LLVFPP Trigger: TGGAGGGAAGACTAGAAGGCAAAATAGACATTCTTG...TTTGTCCTTTATGAACTCTTTTCTATTACTGCAGAACCAACCCATCTCTTTGTC 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000163072.8 |
||
| CDS-3UTR CCA 90 bp | GAACATCTTACTGTGGCCATTTCACACAACACTAAATTCTTCCTGAAAACAGCATTTATTTGGGCCCTTTaGTTCTTGAGTTTTTCCTTG | + |
|
Preference number: 4 (lower is better) Translates to: EHLTVAISHNTKFFLKTAFIWAL*FLSFSL Trigger: CAAGGAAAAACTCAAGAACCAAAGGGCCCAAATAAA...TGCTGTTTTCAGGAAGAATTTAGTGTTGTGTGAAATGGCCACAGTAAGATGTTC 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000027128.11 |
||
| CDS-3UTR CCA 90 bp | AACATCGTACAAAATTCATCTAGAACATCTTACTGTGGCCATTTCACACAACACGTAGAACAGATTGGCTaGTTGCAACATTATGCATCA | + |
|
Preference number: 4 (lower is better) Translates to: NIVQNSSRTSYCGHFTQHVEQIG*LQHYAS Trigger: TGATGCATAATGTTGCAACCAGCCAATCTGTTCTAC...GTGTTGTGTGAAATGGCCACAGTAAGATGTTCTAGATGAATTTTGTACGATGTT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027128.11 |
||
| CDS-3UTR GCA 90 bp | GACAAAGAGATGGGTTGGTTCTGCAGTAATAGAAAAGAGTTCATAAAGGACAAATTTCTTCCAATTCCTTaGACCGATTTTCTAGTTCCA | + |
|
Preference number: 4 (lower is better) Translates to: DKEMGWFCSNRKEFIKDKFLPIP*TDFLVP Trigger: TGGAACTAGAAAATCGGTGCAAGGAATTGGAAGAAA...TTTGTCCTTTATGAACTCTTTTCTATTACTGCAGAACCAACCCATCTCTTTGTC 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000027128.11 ENSMUST00000163072.8 |
||
| CDS-3UTR CCA 90 bp | TTCCAGAGAACATCGTACAAAATTCATCTAGAACATCTTACTGTGGCCATTTCATCATTTTACGCTTTGTaGTCTTTAGTTCCTCCTCAA | + |
|
Preference number: 4 (lower is better) Translates to: FQRTSYKIHLEHLTVAISSFYAL*SLVPPQ Trigger: TTGAGGAGGAACTAAAGACCACAAAGCGTAAAATGA...TGAAATGGCCACAGTAAGATGTTCTAGATGAATTTTGTACGATGTTCTCTGGAA 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000027128.11 |
||
| CDS GCA 90 bp | GAGCTGTGTAGGGCAGTGCACTTCTCCTGCAAAGCGTGTACCTGCTaGCGTTCTGCCTCCACCACTGACCCCATCTCTTGTACTTTGAGG | + |
|
Preference number: 5 (lower is better) Translates to: ELCRAVHFSCKACTC*RSASTTDPISCTLR Trigger: CCTCAAAGTACAAGAGATGGGGTCAGTGGTGGAGGCAGAACGGCAGCAGGTACACGCTTTGCAGGAGAAGTGCACTGCCCTACACAGCTC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000027128.11 ENSMUST00000160472.8 |
||
| CDS GCA 90 bp | GGAGTCTCCCATCCCCTGAGACATTCTCATAGAAGGCAAGGTGGGTaGAAAGCTCACTCGGCGCGCCACATTTGGAATAACACTGGGCAG | + |
|
Preference number: 5 (lower is better) Translates to: GVSHPLRHSHRRQGG*KAHSARHIWNNTGQ Trigger: CTGCCCAGTGTTATTCCAAATGTGGCGCGCCGAGTGAGCTTTGCACCCACCTTGCCTTCTATGAGAATGTCTCAGGGGATGGGAGACTCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000163072.8 |
||
| CDS-3UTR CAA 90 bp | CAAAACCTTCAGCACACATCATGGTCTTCTAACGTAGAAACAGGCCAGCCCCACGTCGTAGCTCTCGGTTaGCCCGGGACACTTCCACCG | + |
|
Preference number: 5 (lower is better) Translates to: QNLQHTSWSSNVETGQPHVVALG*PGTLPP Trigger: CGGTGGAAGTGTCCCGGGCAAACCGAGAGCTACGAC...GTGGGGCTGGCCTGTTTCTACGTTAGAAGACCATGATGTGTGCTGAAGGTTTTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000027128.11 ENSMUST00000163072.8 |
||
| CDS TCA 90 bp | TGGAGACAGGACTGGTCTGCACACTGTAGTTTCCATTTGCACCCCTaGTTCATCCAACAGCCCGTAGCTCGGTCCTCCAGGCAGCAAGTT | + |
|
Preference number: 5 (lower is better) Translates to: WRQDWSAHCSFHLHP*FIQQPVARSSRQQV Trigger: AACTTGCTGCCTGGAGGACCGAGCTACGGGCTGTTGGATGAATCAGGGGTGCAAATGGAAACTACAGTGTGCAGACCAGTCCTGTCTCCA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000027128.11 ENSMUST00000160472.8 |
||
| CDS TCA 90 bp | CTTCTCCTGCAAAGCGTGTACCTGCTGCCGTTCTGCCTCCACCACTaGCCCCATCTCTTGTACTTTGAGGAGCATGGACGATGCAGATGT | + |
|
Preference number: 5 (lower is better) Translates to: LLLQSVYLLPFCLHH*PHLLYFEEHGRCRC Trigger: ACATCTGCATCGTCCATGCTCCTCAAAGTACAAGAGATGGGGTCAGTGGTGGAGGCAGAACGGCAGCAGGTACACGCTTTGCAGGAGAAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000027128.11 ENSMUST00000160472.8 |
||
| CDS GCA 90 bp | ATAGAGCTGTGTAGGGCAGTGCACTTCTCCTGCAAAGCGTGTACCTaGTGCCGTTCTGCCTCCACCACTGACCCCATCTCTTGTACTTTG | + |
|
Preference number: 5 (lower is better) Translates to: IELCRAVHFSCKACT*CRSASTTDPISCTL Trigger: CAAAGTACAAGAGATGGGGTCAGTGGTGGAGGCAGAACGGCAGCAGGTACACGCTTTGCAGGAGAAGTGCACTGCCCTACACAGCTCTAT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000027128.11 ENSMUST00000160472.8 |
||
| CDS-3UTR CAA 90 bp | CAGCACACATCATGGTCTTCTAACGTAGAAACAGGCCAGCCCCACTTGCTGGCCTGTGCGTTATTTGCCTaGGCTGACAAGTGCAGCTTT | + |
|
Preference number: 5 (lower is better) Translates to: QHTSWSSNVETGQPHLLACALFA*ADKCSF Trigger: AAAGCTGCACTTGTCAGCCAAGGCAAATAACGCACA...GGCCAGCAAGTGGGGCTGGCCTGTTTCTACGTTAGAAGACCATGATGTGTGCTG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000027128.11 ENSMUST00000163072.8 |
||
| CDS-3UTR CAA 90 bp | CAGCACACATCATGGTCTTCTAACGTAGAAACAGGCCAGCCCCACTTGCTGGCCTGTTCTGTGCGTTATTaGCCTTGGCTGACAAGTGCA | + |
|
Preference number: 5 (lower is better) Translates to: QHTSWSSNVETGQPHLLACSVRY*PWLTSA Trigger: TGCACTTGTCAGCCAAGGCAAATAACGCACAGAACA...GGCCAGCAAGTGGGGCTGGCCTGTTTCTACGTTAGAAGACCATGATGTGTGCTG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000027128.11 ENSMUST00000163072.8 |
||
| CDS GCA 90 bp | AGGATTAAATGGTCTAGGTGTATCTGGAGTTGCGCCTTTTCATTCTaGACAGCTTGGAGCTCTCCTGTGATGCTGGCATGGGCTGCGTCT | + |
|
Preference number: 5 (lower is better) Translates to: RIKWSRCIWSCAFSF*TAWSSPVMLAWAAS Trigger: AGACGCAGCCCATGCCAGCATCACAGGAGAGCTCCAAGCTGTGCAGAATGAAAAGGCGCAACTCCAGATACACCTAGACCATTTAATCCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000027128.11 ENSMUST00000160472.8 |
||
| CDS CCA 90 bp | TGGTCTAGGTGTATCTGGAGTTGCGCCTTTTCATTCTGCACAGCTTaGAGCTCTCCTGTGATGCTGGCATGGGCTGCGTCTAACAGTAAA | + |
|
Preference number: 5 (lower is better) Translates to: WSRCIWSCAFSFCTA*SSPVMLAWAASNSK Trigger: TTTACTGTTAGACGCAGCCCATGCCAGCATCACAGGAGAGCTCCAAGCTGTGCAGAATGAAAAGGCGCAACTCCAGATACACCTAGACCA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000027128.11 ENSMUST00000160472.8 |
||
| CDS-3UTR CAA 90 bp | CAGCACACATCATGGTCTTCTAACGTAGAAACAGGCCAGCCCCACTTGCTGGCCATTCATCACTTCAAGTaGCAACAGCTTCAGGCCCTT | + |
|
Preference number: 5 (lower is better) Translates to: QHTSWSSNVETGQPHLLAIHHFK*QQLQAL Trigger: AAGGGCCTGAAGCTGTTGCAACTTGAAGTGATGAAT...GGCCAGCAAGTGGGGCTGGCCTGTTTCTACGTTAGAAGACCATGATGTGTGCTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027128.11 |
||
| CDS-3UTR CAA 90 bp | CTTTCAGGTGAGCTTCTGTCTGCTCCAGATACGCCTTGCTGGCACTCAGCTCTGATTCATCACTTCAAGTaGCAACAGCTTCAGGCCCTT | + |
|
Preference number: 5 (lower is better) Translates to: LSGELLSAPDTPCWHSALIHHFK*QQLQAL Trigger: AAGGGCCTGAAGCTGTTGCAACTTGAAGTGATGAAT...CAGAGCTGAGTGCCAGCAAGGCGTATCTGGAGCAGACAGAAGCTCACCTGAAAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000160472.8 |
||
| CDS CCA 90 bp | CTGAAGTACTGTGAACGTTTCAGAAGCTGTCCCATTGATGTGGGTTaGAGACAGGACTGGTCTGCACACTGTAGTTTCCATTTGCACCCC | + |
|
Preference number: 5 (lower is better) Translates to: LKYCERFRSCPIDVG*RQDWSAHCSFHLHP Trigger: GGGGTGCAAATGGAAACTACAGTGTGCAGACCAGTCCTGTCTCCAACCCACATCAATGGGACAGCTTCTGAAACGTTCACAGTACTTCAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000027128.11 ENSMUST00000160472.8 |
||
| CDS-3UTR CAA 90 bp | GCATCATATCTTGATTCTCTTCCAGCCACCTGTCTTCCCGGGGAAGCCTCTGCATTCCAGAAGTTCTTTTaGGACCACTGTCCTCTTCTC | + |
|
Preference number: 5 (lower is better) Translates to: ASYLDSLPATCLPGEASAFQKFF*DHCPLL Trigger: GAGAAGAGGACAGTGGTCCAAAAAGAACTTCTGGAA...TGCAGAGGCTTCCCCGGGAAGACAGGTGGCTGGAAGAGAATCAAGATATGATGC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000160472.8 |
||
| CDS-3UTR CAA 90 bp | ATAAAGGACAAAGCCCAAAACCTTCAGCACACATCATGGTCTTCTAACGTAGAAGTCGTAGCTCTCGGTTaGCCCGGGACACTTCCACCG | + |
|
Preference number: 5 (lower is better) Translates to: IKDKAQNLQHTSWSSNVEVVALG*PGTLPP Trigger: CGGTGGAAGTGTCCCGGGCAAACCGAGAGCTACGAC...TTCTACGTTAGAAGACCATGATGTGTGCTGAAGGTTTTGGGCTTTGTCCTTTAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000027128.11 ENSMUST00000163072.8 |
||
| CDS TCA 90 bp | TCTGGAGTTGCGCCTTTTCATTCTGCACAGCTTGGAGCTCTCCTGTaGTGCTGGCATGGGCTGCGTCTAACAGTAAATTTTGCTCTTGAA | + |
|
Preference number: 5 (lower is better) Translates to: SGVAPFHSAQLGALL*CWHGLRLTVNFALE Trigger: TTCAAGAGCAAAATTTACTGTTAGACGCAGCCCATGCCAGCATCACAGGAGAGCTCCAAGCTGTGCAGAATGAAAAGGCGCAACTCCAGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000027128.11 ENSMUST00000160472.8 |
||
| CDS-3UTR CAA 90 bp | CAGCACACATCATGGTCTTCTAACGTAGAAACAGGCCAGCCCCACTTGCTGGCCCTTTATTTGGGCCCTTaGGTTCTTGAGTTTTTCCTT | + |
|
Preference number: 5 (lower is better) Translates to: QHTSWSSNVETGQPHLLALYLGP*VLEFFL Trigger: AAGGAAAAACTCAAGAACCAAAGGGCCCAAATAAAG...GGCCAGCAAGTGGGGCTGGCCTGTTTCTACGTTAGAAGACCATGATGTGTGCTG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000027128.11 ENSMUST00000163072.8 |
||
| CDS TCA 90 bp | GTCAGCTCAAGTTGTAGTCCATCGAACCTGCATTTAAACCAGCGGTaGGCCTCTTCCAGATTAGCTGTTATCTGTTCTGACTCCACACTG | + |
|
Preference number: 5 (lower is better) Translates to: VSSSCSPSNLHLNQR*ASSRLAVICSDSTL Trigger: CAGTGTGGAGTCAGAACAGATAACAGCTAATCTGGAAGAGGCTCACCGCTGGTTTAAATGCAGGTTCGATGGACTACAACTTGAGCTGAC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000027128.11 ENSMUST00000163072.8 |
||
| CDS-3UTR CAA 90 bp | TCCTCTCCATGTTCTGTGCGTTATTTGCCTTGGCTGACAAGTGCAGCTTTATTTTCAGAAGCTGTCCCATaGATGTGGGTTGGAGACAGG | + |
|
Preference number: 5 (lower is better) Translates to: SSPCSVRYLPWLTSAALFSEAVP*MWVGDR Trigger: CCTGTCTCCAACCCACATCAATGGGACAGCTTCTGA...AAATAAAGCTGCACTTGTCAGCCAAGGCAAATAACGCACAGAACATGGAGAGGA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000160472.8 |
||
| CDS-3UTR CAA 90 bp | GACAAAGCCCAAAACCTTCAGCACACATCATGGTCTTCTAACGTAGAAACAGGCAAGTTTCCCACCTTCTaGCTCTCCCTGTCCTCCAAT | + |
|
Preference number: 5 (lower is better) Translates to: DKAQNLQHTSWSSNVETGKFPTF*LSLSSN Trigger: ATTGGAGGACAGGGAGAGCAAGAAGGTGGGAAACTT...GCCTGTTTCTACGTTAGAAGACCATGATGTGTGCTGAAGGTTTTGGGCTTTGTC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000027128.11 ENSMUST00000163072.8 |
||
| CDS-3UTR CAA 90 bp | CAAAACCTTCAGCACACATCATGGTCTTCTAACGTAGAAACAGGCCAGCCCCACTCTGTGATGCTTTCTTaGCAGTCTCTCTCTCGGTTT | + |
|
Preference number: 5 (lower is better) Translates to: QNLQHTSWSSNVETGQPHSVMLS*QSLSRF Trigger: AAACCGAGAGAGAGACTGCAAAGAAAGCATCACAGA...GTGGGGCTGGCCTGTTTCTACGTTAGAAGACCATGATGTGTGCTGAAGGTTTTG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000027128.11 ENSMUST00000163072.8 |
||
| CDS-3UTR CAA 90 bp | CAAAACCTTCAGCACACATCATGGTCTTCTAACGTAGAAACAGGCCAGCCCCACTCTGCAACCGGTTTTTaGTCAGCTCAAGTTGTAGTC | + |
|
Preference number: 5 (lower is better) Translates to: QNLQHTSWSSNVETGQPHSATGF*SAQVVV Trigger: GACTACAACTTGAGCTGACAAAAAACCGGTTGCAGA...GTGGGGCTGGCCTGTTTCTACGTTAGAAGACCATGATGTGTGCTGAAGGTTTTG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000027128.11 ENSMUST00000163072.8 |
||
| CDS TCA 90 bp | AGCTTATGTAGATGGTCCTTCTGCAGCATGGTTTCAGCGAATGTGTaGAGCTGTGCTTCTAGCTGTTTAACCTTTGTCTGGAGTTTCCCC | + |
|
Preference number: 5 (lower is better) Translates to: SLCRWSFCSMVSANV*SCASSCLTFVWSFP Trigger: GGGGAAACTCCAGACAAAGGTTAAACAGCTAGAAGCACAGCTTCACACATTCGCTGAAACCATGCTGCAGAAGGACCATCTACATAAGCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027128.11 |
||
| CDS GCA 90 bp | ATTTCATCCTGTGCCCTGTCTTCTTCCTCCTTGACAACTTTCAATTaGTGGCGCAAATTCATCACTTCAAGTTGCAACAGCTTCAGGCCC | + |
|
Preference number: 5 (lower is better) Translates to: ISSCALSSSSLTTFN*WRKFITSSCNSFRP Trigger: GGGCCTGAAGCTGTTGCAACTTGAAGTGATGAATTTGCGCCAGCAATTGAAAGTTGTCAAGGAGGAAGAAGACAGGGCACAGGATGAAAT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000027128.11 ENSMUST00000160472.8 |
||
| CDS-3UTR CAA 90 bp | CAAAACCTTCAGCACACATCATGGTCTTCTAACGTAGAAACAGGCCAGCCCCACCTTGACAACTTTCAATaGCTGGCGCAAATTCATCAC | + |
|
Preference number: 5 (lower is better) Translates to: QNLQHTSWSSNVETGQPHLDNFQ*LAQIHH Trigger: GTGATGAATTTGCGCCAGCAATTGAAAGTTGTCAAG...GTGGGGCTGGCCTGTTTCTACGTTAGAAGACCATGATGTGTGCTGAAGGTTTTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000027128.11 |
||
| CDS-3UTR CAA 90 bp | CTCTCTCTCGGTTTGAAACTGCTTCCTCAGAGCTTCAATGCGCTCTGCATGCAAGGTTCATTTTACGCTTaGTGGTCTTTAGTTCCTCCT | + |
|
Preference number: 5 (lower is better) Translates to: LSLGLKLLPQSFNALCMQGSFYA*WSLVPP Trigger: AGGAGGAACTAAAGACCACAAAGCGTAAAATGAACC...TTGCATGCAGAGCGCATTGAAGCTCTGAGGAAGCAGTTTCAAACCGAGAGAGAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000160472.8 |
||
| CDS-3UTR CAA 90 bp | GACAAAGCCCAAAACCTTCAGCACACATCATGGTCTTCTAACGTAGAAACAGGCTGTTCTGTGCGTTATTaGCCTTGGCTGACAAGTGCA | + |
|
Preference number: 5 (lower is better) Translates to: DKAQNLQHTSWSSNVETGCSVRY*PWLTSA Trigger: TGCACTTGTCAGCCAAGGCAAATAACGCACAGAACA...GCCTGTTTCTACGTTAGAAGACCATGATGTGTGCTGAAGGTTTTGGGCTTTGTC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000027128.11 ENSMUST00000163072.8 |
||
| CDS TCA 90 bp | ATGGACGATGCAGATGTCTCAAGAGATTCCCTGACAAGCTTCTCCTaGGCCAGTTGTCGCCGTAGCTCTTGGATTTTAAGGTTCATTTTA | + |
|
Preference number: 5 (lower is better) Translates to: MDDADVSRDSLTSFS*ASCRRSSWILRFIL Trigger: TAAAATGAACCTTAAAATCCAAGAGCTACGGCGACAACTGGCTCAGGAGAAGCTTGTCAGGGAATCTCTTGAGACATCTGCATCGTCCAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000027128.11 ENSMUST00000160472.8 |
||
| CDS CCA 90 bp | GCTGGCGCAAATTCATCACTTCAAGTTGCAACAGCTTCAGGCCCTTaGAATGCTCCCCTTGTATTATATTCAGCTGATCGTTCAGAAAAG | + |
|
Preference number: 5 (lower is better) Translates to: AGANSSLQVATASGP*NAPLVLYSADRSEK Trigger: CTTTTCTGAACGATCAGCTGAATATAATACAAGGGGAGCATTCCAAGGGCCTGAAGCTGTTGCAACTTGAAGTGATGAATTTGCGCCAGC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000027128.11 ENSMUST00000160472.8 |
||
| CDS-3UTR CAA 90 bp | ATAAAGGACAAAGCCCAAAACCTTCAGCACACATCATGGTCTTCTAACGTAGAATCAGAAGCTGTCCCATaGATGTGGGTTGGAGACAGG | + |
|
Preference number: 5 (lower is better) Translates to: IKDKAQNLQHTSWSSNVESEAVP*MWVGDR Trigger: CCTGTCTCCAACCCACATCAATGGGACAGCTTCTGA...TTCTACGTTAGAAGACCATGATGTGTGCTGAAGGTTTTGGGCTTTGTCCTTTAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027128.11 |
||
| CDS-3UTR CAA 90 bp | ATAAAGGACAAAGCCCAAAACCTTCAGCACACATCATGGTCTTCTAACGTAGAATCAGCAACCTGCTCTTaGAAGGCTTCCAGACTCTGC | + |
|
Preference number: 5 (lower is better) Translates to: IKDKAQNLQHTSWSSNVESATCS*KASRLC Trigger: GCAGAGTCTGGAAGCCTTCAAAGAGCAGGTTGCTGA...TTCTACGTTAGAAGACCATGATGTGTGCTGAAGGTTTTGGGCTTTGTCCTTTAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000027128.11 ENSMUST00000163072.8 |
||
| CDS-3UTR CAA 90 bp | AAAGCCCAAAACCTTCAGCACACATCATGGTCTTCTAACGTAGAAACAGGCCAGTGGGCCCTTTGGTTCTaGAGTTTTTCCTTGTTACTG | + |
|
Preference number: 5 (lower is better) Translates to: KAQNLQHTSWSSNVETGQWALWF*SFSLLL Trigger: CAGTAACAAGGAAAAACTCAAGAACCAAAGGGCCCA...CTGGCCTGTTTCTACGTTAGAAGACCATGATGTGTGCTGAAGGTTTTGGGCTTT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000027128.11 ENSMUST00000163072.8 |
||
| CDS-3UTR CAA 90 bp | GACAAAGCCCAAAACCTTCAGCACACATCATGGTCTTCTAACGTAGAAACAGGCCTTGGAATGCTCCCCTaGTATTATATTCAGCTGATC | + |
|
Preference number: 5 (lower is better) Translates to: DKAQNLQHTSWSSNVETGLGMLP*YYIQLI Trigger: GATCAGCTGAATATAATACAAGGGGAGCATTCCAAG...GCCTGTTTCTACGTTAGAAGACCATGATGTGTGCTGAAGGTTTTGGGCTTTGTC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000027128.11 |
||
| CDS-3UTR CAA 90 bp | AAAGCCCAAAACCTTCAGCACACATCATGGTCTTCTAACGTAGAAACAGGCCAGGGTTCATTTTACGCTTaGTGGTCTTTAGTTCCTCCT | + |
|
Preference number: 5 (lower is better) Translates to: KAQNLQHTSWSSNVETGQGSFYA*WSLVPP Trigger: AGGAGGAACTAAAGACCACAAAGCGTAAAATGAACC...CTGGCCTGTTTCTACGTTAGAAGACCATGATGTGTGCTGAAGGTTTTGGGCTTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000027128.11 |
||
| CDS-3UTR CAA 90 bp | TGCTTCTACTTTGGATTCCTCAGCAACCTGCTCTTTGAAGGCTTCCAGACTCTGAGCTCTGAACACTTTTaGGAAAGCTGGTCATTCAAA | + |
|
Preference number: 5 (lower is better) Translates to: CFYFGFLSNLLFEGFQTLSSEHF*ESWSFK Trigger: TTTGAATGACCAGCTTTCCAAAAAGTGTTCAGAGCT...CAGAGTCTGGAAGCCTTCAAAGAGCAGGTTGCTGAGGAATCCAAAGTAGAAGCA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000160472.8 |
||
| CDS-3UTR CAA 90 bp | ATAAAGGACAAAGCCCAAAACCTTCAGCACACATCATGGTCTTCTAACGTAGAATGCCGCTCACGCTCTTaGCTTTCCAGTTTTTCTTGG | + |
|
Preference number: 5 (lower is better) Translates to: IKDKAQNLQHTSWSSNVECRSRS*LSSFSW Trigger: CCAAGAAAAACTGGAAAGCAAAGAGCGTGAGCGGCA...TTCTACGTTAGAAGACCATGATGTGTGCTGAAGGTTTTGGGCTTTGTCCTTTAT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000027128.11 ENSMUST00000163072.8 |
||
| CDS-3UTR CAA 90 bp | TTCTGCAGTAATAGAAAAGAGTTCATAAAGGACAAAGCCCAAAACCTTCAGCACTCAGCAACCTGCTCTTaGAAGGCTTCCAGACTCTGC | + |
|
Preference number: 5 (lower is better) Translates to: FCSNRKEFIKDKAQNLQHSATCS*KASRLC Trigger: GCAGAGTCTGGAAGCCTTCAAAGAGCAGGTTGCTGA...GTGCTGAAGGTTTTGGGCTTTGTCCTTTATGAACTCTTTTCTATTACTGCAGAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000027128.11 ENSMUST00000163072.8 |
||
| CDS-3UTR CAA 90 bp | GACAAAGCCCAAAACCTTCAGCACACATCATGGTCTTCTAACGTAGAAACAGGCCACTTAGGAAGGGTCTaGAGGCAAGAATGTCTATTT | + |
|
Preference number: 5 (lower is better) Translates to: DKAQNLQHTSWSSNVETGHLGRV*RQECLF Trigger: AAATAGACATTCTTGCCTCAAGACCCTTCCTAAGTG...GCCTGTTTCTACGTTAGAAGACCATGATGTGTGCTGAAGGTTTTGGGCTTTGTC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000163072.8 |
||
| CDS GCA 90 bp | TCCTTGACAACTTTCAATTGCTGGCGCAAATTCATCACTTCAAGTTaGAACAGCTTCAGGCCCTTGGAATGCTCCCCTTGTATTATATTC | + |
|
Preference number: 5 (lower is better) Translates to: SLTTFNCWRKFITSS*NSFRPLECSPCIIF Trigger: GAATATAATACAAGGGGAGCATTCCAAGGGCCTGAAGCTGTTGCAACTTGAAGTGATGAATTTGCGCCAGCAATTGAAAGTTGTCAAGGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000027128.11 ENSMUST00000160472.8 |
||
| CDS-3UTR CAA 90 bp | TGCTTCTACTTTGGATTCCTCAGCAACCTGCTCTTTGAAGGCTTCCAGACTCTGGGTCTTCTAAATAGTTaGGAGTTTCTAATTGACCTC | + |
|
Preference number: 5 (lower is better) Translates to: CFYFGFLSNLLFEGFQTLGLLNS*EFLIDL Trigger: GAGGTCAATTAGAAACTCCAAACTATTTAGAAGACC...CAGAGTCTGGAAGCCTTCAAAGAGCAGGTTGCTGAGGAATCCAAAGTAGAAGCA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000160472.8 |
||
| CDS-3UTR CAA 90 bp | TCCTCTCCATGTTCTGTGCGTTATTTGCCTTGGCTGACAAGTGCAGCTTTATTTCTTGACAACTTTCAATaGCTGGCGCAAATTCATCAC | + |
|
Preference number: 5 (lower is better) Translates to: SSPCSVRYLPWLTSAALFLDNFQ*LAQIHH Trigger: GTGATGAATTTGCGCCAGCAATTGAAAGTTGTCAAG...AAATAAAGCTGCACTTGTCAGCCAAGGCAAATAACGCACAGAACATGGAGAGGA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000160472.8 |
||
| CDS-3UTR CAA 90 bp | TGCTTAGTTTCCCATCGATGTAGAACAGATTGGCTGGTTGCAACATTATGCATCCTGTCTTCTTCCTCCTaGACAACTTTCAATTGCTGG | + |
|
Preference number: 5 (lower is better) Translates to: CLVSHRCRTDWLVATLCILSSSS*TTFNCW Trigger: CCAGCAATTGAAAGTTGTCAAGGAGGAAGAAGACAG...GATGCATAATGTTGCAACCAGCCAATCTGTTCTACATCGATGGGAAACTAAGCA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000160472.8 |
||
| CDS-3UTR CAA 90 bp | CATCTAGAACATCTTACTGTGGCCATTTCACACAACACTAAATTCTTCCTGAAACTGGGCCAGCAGGTCTaGGGTTGTTTTCATAGAGCT | + |
|
Preference number: 5 (lower is better) Translates to: HLEHLTVAISHNTKFFLKLGQQV*GCFHRA Trigger: AGCTCTATGAAAACAACCCAAGACCTGCTGGCCCAG...TTTCAGGAAGAATTTAGTGTTGTGTGAAATGGCCACAGTAAGATGTTCTAGATG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027128.11 |
||
| CDS-3UTR CAA 90 bp | TTCTTCCTCATTTTTCCCAAGAATAGATTTCATCTCTTTCAGGTGAGCTTCTGTCTGGGCCAGCAGGTCTaGGGTTGTTTTCATAGAGCT | + |
|
Preference number: 5 (lower is better) Translates to: FFLIFPKNRFHLFQVSFCLGQQV*GCFHRA Trigger: AGCTCTATGAAAACAACCCAAGACCTGCTGGCCCAG...ACAGAAGCTCACCTGAAAGAGATGAAATCTATTCTTGGGAAAAATGAGGAAGAA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000160472.8 |
||
| CDS-3UTR CAA 90 bp | GAACATCTTACTGTGGCCATTTCACACAACACTAAATTCTTCCTGAAAACAGCATCGACACTTCACTGCTaGGGCCAGTTCTTCCTCATT | + |
|
Preference number: 5 (lower is better) Translates to: EHLTVAISHNTKFFLKTASTLHC*GQFFLI Trigger: AATGAGGAAGAACTGGCCCAAGCAGTGAAGTGTCGA...TGCTGTTTTCAGGAAGAATTTAGTGTTGTGTGAAATGGCCACAGTAAGATGTTC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027128.11 |
||
| CDS-3UTR CAA 90 bp | TTCTGCAGTAATAGAAAAGAGTTCATAAAGGACAAAGCCCAAAACCTTCAGCACTCGACACTTCACTGCTaGGGCCAGTTCTTCCTCATT | + |
|
Preference number: 5 (lower is better) Translates to: FCSNRKEFIKDKAQNLQHSTLHC*GQFFLI Trigger: AATGAGGAAGAACTGGCCCAAGCAGTGAAGTGTCGA...GTGCTGAAGGTTTTGGGCTTTGTCCTTTATGAACTCTTTTCTATTACTGCAGAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000027128.11 ENSMUST00000163072.8 |
||
| CDS-3UTR CAA 90 bp | TTCTGCAGTAATAGAAAAGAGTTCATAAAGGACAAAGCCCAAAACCTTCAGCACAAGTTTCCCACCTTCTaGCTCTCCCTGTCCTCCAAT | + |
|
Preference number: 5 (lower is better) Translates to: FCSNRKEFIKDKAQNLQHKFPTF*LSLSSN Trigger: ATTGGAGGACAGGGAGAGCAAGAAGGTGGGAAACTT...GTGCTGAAGGTTTTGGGCTTTGTCCTTTATGAACTCTTTTCTATTACTGCAGAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000027128.11 ENSMUST00000163072.8 |
||
| CDS-3UTR CAA 90 bp | AAAGCCCAAAACCTTCAGCACACATCATGGTCTTCTAACGTAGAAACAGGCCAGATTGTAACTTTGCAGTaGTCTTCTTTAGCCTCTGCT | + |
|
Preference number: 5 (lower is better) Translates to: KAQNLQHTSWSSNVETGQIVTLQ*SSLASA Trigger: AGCAGAGGCTAAAGAAGACAACTGCAAAGTTACAAT...CTGGCCTGTTTCTACGTTAGAAGACCATGATGTGTGCTGAAGGTTTTGGGCTTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000027128.11 ENSMUST00000163072.8 |
||
| CDS-3UTR CAA 90 bp | GACAAAGCCCAAAACCTTCAGCACACATCATGGTCTTCTAACGTAGAAACAGGCAGCATGATTGTAACTTaGCAGTTGTCTTCTTTAGCC | + |
|
Preference number: 5 (lower is better) Translates to: DKAQNLQHTSWSSNVETGSMIVT*QLSSLA Trigger: GGCTAAAGAAGACAACTGCAAAGTTACAATCATGCT...GCCTGTTTCTACGTTAGAAGACCATGATGTGTGCTGAAGGTTTTGGGCTTTGTC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000027128.11 ENSMUST00000163072.8 |
||
| CDS-3UTR CAA 90 bp | AAAGCCCAAAACCTTCAGCACACATCATGGTCTTCTAACGTAGAAACAGGCCAGCTTTATTTGGGCCCTTaGGTTCTTGAGTTTTTCCTT | + |
|
Preference number: 5 (lower is better) Translates to: KAQNLQHTSWSSNVETGQLYLGP*VLEFFL Trigger: AAGGAAAAACTCAAGAACCAAAGGGCCCAAATAAAG...CTGGCCTGTTTCTACGTTAGAAGACCATGATGTGTGCTGAAGGTTTTGGGCTTT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000027128.11 ENSMUST00000163072.8 |
||
| CDS-3UTR CAA 90 bp | GACAAAGCCCAAAACCTTCAGCACACATCATGGTCTTCTAACGTAGAAACAGGCATTATGCATCATATCTaGATTCTCTTCCAGCCACCT | + |
|
Preference number: 5 (lower is better) Translates to: DKAQNLQHTSWSSNVETGIMHHI*ILFQPP Trigger: AGGTGGCTGGAAGAGAATCAAGATATGATGCATAAT...GCCTGTTTCTACGTTAGAAGACCATGATGTGTGCTGAAGGTTTTGGGCTTTGTC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000027128.11 ENSMUST00000163072.8 |
||
| CDS-3UTR CAA 90 bp | AGGTCACTTCTTCCTCTCTGTGTCAGAATGGTACTTCTGCTTAGTTTCCCATCGTCTTCATGTTCTTTCTaGAGAGATATTTGTGTAGCC | + |
|
Preference number: 5 (lower is better) Translates to: RSLLPLCVRMVLLLSFPSSSCSF*RDICVA Trigger: GGCTACACAAATATCTCTCAAGAAAGAACATGAAGA...CGATGGGAAACTAAGCAGAAGTACCATTCTGACACAGAGAGGAAGAAGTGACCT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000160472.8 |
||
| CDS-3UTR CAA 90 bp | ACATCGTACAAAATTCATCTAGAACATCTTACTGTGGCCATTTCACACAACACTACTGCAGATGGCCATTaGTCTGGAGAGCTTGCTCTA | + |
|
Preference number: 5 (lower is better) Translates to: TSYKIHLEHLTVAISHNTTADGH*SGELAL Trigger: TAGAGCAAGCTCTCCAGACAAATGGCCATCTGCAGT...AGTGTTGTGTGAAATGGCCACAGTAAGATGTTCTAGATGAATTTTGTACGATGT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027128.11 |
||
| CDS-3UTR CAA 90 bp | GACAAAGAGATGGGTTGGTTCTGCAGTAATAGAAAAGAGTTCATAAAGGACAAAACTGCAGATGGCCATTaGTCTGGAGAGCTTGCTCTA | + |
|
Preference number: 5 (lower is better) Translates to: DKEMGWFCSNRKEFIKDKTADGH*SGELAL Trigger: TAGAGCAAGCTCTCCAGACAAATGGCCATCTGCAGT...TTTGTCCTTTATGAACTCTTTTCTATTACTGCAGAACCAACCCATCTCTTTGTC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000027128.11 ENSMUST00000163072.8 |
||
| CDS-3UTR CAA 90 bp | ATAAAGGACAAAGCCCAAAACCTTCAGCACACATCATGGTCTTCTAACGTAGAATCTGCAACCGGTTTTTaGTCAGCTCAAGTTGTAGTC | + |
|
Preference number: 5 (lower is better) Translates to: IKDKAQNLQHTSWSSNVESATGF*SAQVVV Trigger: GACTACAACTTGAGCTGACAAAAAACCGGTTGCAGA...TTCTACGTTAGAAGACCATGATGTGTGCTGAAGGTTTTGGGCTTTGTCCTTTAT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000027128.11 ENSMUST00000163072.8 |
||
| CDS-3UTR CAA 90 bp | TGCTTAGTTTCCCATCGATGTAGAACAGATTGGCTGGTTGCAACATTATGCATCTTTTCTTCCACCAACTaGCAAATGAGGTTATCTCTG | + |
|
Preference number: 5 (lower is better) Translates to: CLVSHRCRTDWLVATLCIFSSTN*QMRLSL Trigger: CAGAGATAACCTCATTTGCAAGTTGGTGGAAGAAAA...GATGCATAATGTTGCAACCAGCCAATCTGTTCTACATCGATGGGAAACTAAGCA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000160472.8 |
||
| CDS-3UTR CAA 90 bp | TTCTGCAGTAATAGAAAAGAGTTCATAAAGGACAAAGCCCAAAACCTTCAGCACTTCCAGAAGTTCTTTTaGGACCACTGTCCTCTTCTC | + |
|
Preference number: 5 (lower is better) Translates to: FCSNRKEFIKDKAQNLQHFQKFF*DHCPLL Trigger: GAGAAGAGGACAGTGGTCCAAAAAGAACTTCTGGAA...GTGCTGAAGGTTTTGGGCTTTGTCCTTTATGAACTCTTTTCTATTACTGCAGAA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000027128.11 |
||
| CDS-3UTR CAA 90 bp | CATCTAGAACATCTTACTGTGGCCATTTCACACAACACTAAATTCTTCCTGAAATGTGCGTTATTTGCCTaGGCTGACAAGTGCAGCTTT | + |
|
Preference number: 5 (lower is better) Translates to: HLEHLTVAISHNTKFFLKCALFA*ADKCSF Trigger: AAAGCTGCACTTGTCAGCCAAGGCAAATAACGCACA...TTTCAGGAAGAATTTAGTGTTGTGTGAAATGGCCACAGTAAGATGTTCTAGATG 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027128.11 |
||
| CDS-3UTR CAA 90 bp | ATAAAGGACAAAGCCCAAAACCTTCAGCACACATCATGGTCTTCTAACGTAGAAGTTTCTTCCAATTCCTaGCACCGATTTTCTAGTTCC | + |
|
Preference number: 5 (lower is better) Translates to: IKDKAQNLQHTSWSSNVEVSSNS*HRFSSS Trigger: GGAACTAGAAAATCGGTGCAAGGAATTGGAAGAAAC...TTCTACGTTAGAAGACCATGATGTGTGCTGAAGGTTTTGGGCTTTGTCCTTTAT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000027128.11 ENSMUST00000163072.8 |
||
| CDS CCA 90 bp | GCACATTCGATTTACCAGAAATTCATAGTTCCTCCACAAATTACCTaGGCTTTCTGGACAAATTACTTCATTTGGGATAGGACTAATGGC | + |
|
Preference number: 5 (lower is better) Translates to: AHSIYQKFIVPPQIT*AFWTNYFIWDRTNG Trigger: GCCATTAGTCCTATCCCAAATGAAGTAATTTGTCCAGAAAGCCCAGGTAATTTGTGGAGGAACTATGAATTTCTGGTAAATCGAATGTGC 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000027128.11 ENSMUST00000160472.8 |
||
| CDS-3UTR CAA 90 bp | AACATCGTACAAAATTCATCTAGAACATCTTACTGTGGCCATTTCACACAACACCTGTCTTCTTCCTCCTaGACAACTTTCAATTGCTGG | + |
|
Preference number: 5 (lower is better) Translates to: NIVQNSSRTSYCGHFTQHLSSSS*TTFNCW Trigger: CCAGCAATTGAAAGTTGTCAAGGAGGAAGAAGACAG...GTGTTGTGTGAAATGGCCACAGTAAGATGTTCTAGATGAATTTTGTACGATGTT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027128.11 |
||
| CDS-3UTR CAA 90 bp | CATCTAGAACATCTTACTGTGGCCATTTCACACAACACTAAATTCTTCCTGAAATCTGTGATGCTTTCTTaGCAGTCTCTCTCTCGGTTT | + |
|
Preference number: 5 (lower is better) Translates to: HLEHLTVAISHNTKFFLKSVMLS*QSLSRF Trigger: AAACCGAGAGAGAGACTGCAAAGAAAGCATCACAGA...TTTCAGGAAGAATTTAGTGTTGTGTGAAATGGCCACAGTAAGATGTTCTAGATG 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027128.11 |
||
| CDS-3UTR CAA 90 bp | ACATCGTACAAAATTCATCTAGAACATCTTACTGTGGCCATTTCACACAACACTTGGGCCCTTTGGTTCTaGAGTTTTTCCTTGTTACTG | + |
|
Preference number: 5 (lower is better) Translates to: TSYKIHLEHLTVAISHNTWALWF*SFSLLL Trigger: CAGTAACAAGGAAAAACTCAAGAACCAAAGGGCCCA...AGTGTTGTGTGAAATGGCCACAGTAAGATGTTCTAGATGAATTTTGTACGATGT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000027128.11 |
||
| CDS-3UTR CAA 90 bp | GAACATCTTACTGTGGCCATTTCACACAACACTAAATTCTTCCTGAAAACAGCAGTTTCTTCCAATTCCTaGCACCGATTTTCTAGTTCC | + |
|
Preference number: 5 (lower is better) Translates to: EHLTVAISHNTKFFLKTAVSSNS*HRFSSS Trigger: GGAACTAGAAAATCGGTGCAAGGAATTGGAAGAAAC...TGCTGTTTTCAGGAAGAATTTAGTGTTGTGTGAAATGGCCACAGTAAGATGTTC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000027128.11 |
||
| CDS TCA 90 bp | CCTTTTCAGTTTGCAGGTGAAAGATGTTCATCTTCAAGGACTGAATaGGGTTCTCCAAGTAGCACATTCGATTTACCAGAAATTCATAGT | + |
|
Preference number: 5 (lower is better) Translates to: PFQFAGERCSSSRTE*GSPSSTFDLPEIHS Trigger: ACTATGAATTTCTGGTAAATCGAATGTGCTACTTGGAGAACCTCATTCAGTCCTTGAAGATGAACATCTTTCACCTGCAAACTGAAAAGG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000027128.11 ENSMUST00000160472.8 |
||
| CDS CCA 90 bp | ATTTACCAGAAATTCATAGTTCCTCCACAAATTACCTGGGCTTTCTaGACAAATTACTTCATTTGGGATAGGACTAATGGCTTTCTGGCT | + |
|
Preference number: 5 (lower is better) Translates to: IYQKFIVPPQITWAF*TNYFIWDRTNGFLA Trigger: AGCCAGAAAGCCATTAGTCCTATCCCAAATGAAGTAATTTGTCCAGAAAGCCCAGGTAATTTGTGGAGGAACTATGAATTTCTGGTAAAT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000027128.11 ENSMUST00000160472.8 |
||
| CDS-3UTR CAA 90 bp | GAACATCTTACTGTGGCCATTTCACACAACACTAAATTCTTCCTGAAAACAGCATTTTCTTCCACCAACTaGCAAATGAGGTTATCTCTG | + |
|
Preference number: 5 (lower is better) Translates to: EHLTVAISHNTKFFLKTAFSSTN*QMRLSL Trigger: CAGAGATAACCTCATTTGCAAGTTGGTGGAAGAAAA...TGCTGTTTTCAGGAAGAATTTAGTGTTGTGTGAAATGGCCACAGTAAGATGTTC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000027128.11 |
||
| CDS-3UTR CAA 90 bp | TTCTGCAGTAATAGAAAAGAGTTCATAAAGGACAAAGCCCAAAACCTTCAGCACATTGTAACTTTGCAGTaGTCTTCTTTAGCCTCTGCT | + |
|
Preference number: 5 (lower is better) Translates to: FCSNRKEFIKDKAQNLQHIVTLQ*SSLASA Trigger: AGCAGAGGCTAAAGAAGACAACTGCAAAGTTACAAT...GTGCTGAAGGTTTTGGGCTTTGTCCTTTATGAACTCTTTTCTATTACTGCAGAA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000027128.11 ENSMUST00000163072.8 |
||
| CDS-3UTR CAA 90 bp | GAACATCTTACTGTGGCCATTTCACACAACACTAAATTCTTCCTGAAAACAGCATCTTCATGTTCTTTCTaGAGAGATATTTGTGTAGCC | + |
|
Preference number: 5 (lower is better) Translates to: EHLTVAISHNTKFFLKTASSCSF*RDICVA Trigger: GGCTACACAAATATCTCTCAAGAAAGAACATGAAGA...TGCTGTTTTCAGGAAGAATTTAGTGTTGTGTGAAATGGCCACAGTAAGATGTTC 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027128.11 |
||
| CDS-3UTR CAA 90 bp | ACATCGTACAAAATTCATCTAGAACATCTTACTGTGGCCATTTCACACAACACTAGCTCTGAACACTTTTaGGAAAGCTGGTCATTCAAA | + |
|
Preference number: 5 (lower is better) Translates to: TSYKIHLEHLTVAISHNTSSEHF*ESWSFK Trigger: TTTGAATGACCAGCTTTCCAAAAAGTGTTCAGAGCT...AGTGTTGTGTGAAATGGCCACAGTAAGATGTTCTAGATGAATTTTGTACGATGT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000027128.11 |
||
| CDS-3UTR CAA 90 bp | TTCCAGAGAACATCGTACAAAATTCATCTAGAACATCTTACTGTGGCCATTTCAAGCATGATTGTAACTTaGCAGTTGTCTTCTTTAGCC | + |
|
Preference number: 5 (lower is better) Translates to: FQRTSYKIHLEHLTVAISSMIVT*QLSSLA Trigger: GGCTAAAGAAGACAACTGCAAAGTTACAATCATGCT...TGAAATGGCCACAGTAAGATGTTCTAGATGAATTTTGTACGATGTTCTCTGGAA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027128.11 |
||
| CDS-3UTR CAA 90 bp | GACAAAGAGATGGGTTGGTTCTGCAGTAATAGAAAAGAGTTCATAAAGGACAAAATTATGCATCATATCTaGATTCTCTTCCAGCCACCT | + |
|
Preference number: 5 (lower is better) Translates to: DKEMGWFCSNRKEFIKDKIMHHI*ILFQPP Trigger: AGGTGGCTGGAAGAGAATCAAGATATGATGCATAAT...TTTGTCCTTTATGAACTCTTTTCTATTACTGCAGAACCAACCCATCTCTTTGTC 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000027128.11 ENSMUST00000163072.8 |
||
| CDS-3UTR CAA 90 bp | GACAAAGAGATGGGTTGGTTCTGCAGTAATAGAAAAGAGTTCATAAAGGACAAAGGTCTTCTAAATAGTTaGGAGTTTCTAATTGACCTC | + |
|
Preference number: 5 (lower is better) Translates to: DKEMGWFCSNRKEFIKDKGLLNS*EFLIDL Trigger: GAGGTCAATTAGAAACTCCAAACTATTTAGAAGACC...TTTGTCCTTTATGAACTCTTTTCTATTACTGCAGAACCAACCCATCTCTTTGTC 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027128.11 |
||
| CDS TCA 72 bp | GACTGGTCTGCACACTGTAGTTTCCATTTGCACCCCTaGTTCATCCAACAGCCCGTAGCTCGGTCCTCCAGG | + |
|
Preference number: 6 (lower is better) Translates to: DWSAHCSFHLHP*FIQQPVARSSR Trigger: CCTGGAGGACCGAGCTACGGGCTGTTGGATGAATCAGGGGTGCAAATGGAAACTACAGTGTGCAGACCAGTC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000027128.11 ENSMUST00000160472.8 |
||
| CDS CAA 72 bp | GTGTATCTGGAGTTGCGCCTTTTCATTCTGCACAGCTaGGAGCTCTCCTGTGATGCTGGCATGGGCTGCGTC | + |
|
Preference number: 6 (lower is better) Translates to: VYLELRLFILHS*ELSCDAGMGCV Trigger: GACGCAGCCCATGCCAGCATCACAGGAGAGCTCCAAGCTGTGCAGAATGAAAAGGCGCAACTCCAGATACAC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000027128.11 ENSMUST00000160472.8 |
||
| CDS TCA 72 bp | GGAGCATGGACGATGCAGATGTCTCAAGAGATTCCCTaGCAAGCTTCTCCTGAGCCAGTTGTCGCCGTAGCT | + |
|
Preference number: 6 (lower is better) Translates to: GAWTMQMSQEIP*QASPEPVVAVA Trigger: AGCTACGGCGACAACTGGCTCAGGAGAAGCTTGTCAGGGAATCTCTTGAGACATCTGCATCGTCCATGCTCC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000027128.11 ENSMUST00000160472.8 |
||
| CDS CCA 72 bp | TGTATCTGGAGTTGCGCCTTTTCATTCTGCACAGCTTaGAGCTCTCCTGTGATGCTGGCATGGGCTGCGTCT | + |
|
Preference number: 6 (lower is better) Translates to: CIWSCAFSFCTA*SSPVMLAWAAS Trigger: AGACGCAGCCCATGCCAGCATCACAGGAGAGCTCCAAGCTGTGCAGAATGAAAAGGCGCAACTCCAGATACA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000027128.11 ENSMUST00000160472.8 |
||
| CDS GCA 72 bp | TGGTCTAGGTGTATCTGGAGTTGCGCCTTTTCATTCTaGACAGCTTGGAGCTCTCCTGTGATGCTGGCATGG | + |
|
Preference number: 6 (lower is better) Translates to: WSRCIWSCAFSF*TAWSSPVMLAW Trigger: CCATGCCAGCATCACAGGAGAGCTCCAAGCTGTGCAGAATGAAAAGGCGCAACTCCAGATACACCTAGACCA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000027128.11 ENSMUST00000160472.8 |
||
| CDS GCA 72 bp | CATCCCCTGAGACATTCTCATAGAAGGCAAGGTGGGTaGAAAGCTCACTCGGCGCGCCACATTTGGAATAAC | + |
|
Preference number: 6 (lower is better) Translates to: HPLRHSHRRQGG*KAHSARHIWNN Trigger: GTTATTCCAAATGTGGCGCGCCGAGTGAGCTTTGCACCCACCTTGCCTTCTATGAGAATGTCTCAGGGGATG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000163072.8 |
||
| CDS GCA 72 bp | GTCTCCGTGGCAATTTCCAGAGTGGCAGTCAATCTCTaGATTTCATCCTGTGCCCTGTCTTCTTCCTCCTTG | + |
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Preference number: 6 (lower is better) Translates to: VSVAISRVAVNL*ISSCALSSSSL Trigger: CAAGGAGGAAGAAGACAGGGCACAGGATGAAATGCAGAGATTGACTGCCACTCTGGAAATTGCCACGGAGAC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000027128.11 ENSMUST00000160472.8 |
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| CDS CAA 72 bp | ACCTGTCTTCCCGGGGAAGCCTCTGCAACCGGTTTTTaGTCAGCTCAAGTTGTAGTCCATCGAACCTGCATT | + |
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Preference number: 6 (lower is better) Translates to: TCLPGEASATGF*SAQVVVHRTCI Trigger: AATGCAGGTTCGATGGACTACAACTTGAGCTGACAAAAAACCGGTTGCAGAGGCTTCCCCGGGAAGACAGGT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000027128.11 ENSMUST00000163072.8 |
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| CDS TCA 72 bp | GCAGATGTCTCAAGAGATTCCCTGACAAGCTTCTCCTaGGCCAGTTGTCGCCGTAGCTCTTGGATTTTAAGG | + |
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Preference number: 6 (lower is better) Translates to: ADVSRDSLTSFS*ASCRRSSWILR Trigger: CCTTAAAATCCAAGAGCTACGGCGACAACTGGCTCAGGAGAAGCTTGTCAGGGAATCTCTTGAGACATCTGC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000027128.11 ENSMUST00000160472.8 |
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| CDS TCA 72 bp | GTTCTGCCTCCACCACTGACCCCATCTCTTGTACTTTaGGGAGCATGGACGATGCAGATGTCTCAAGAGATT | + |
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Preference number: 6 (lower is better) Translates to: VLPPPLTPSLVL*GAWTMQMSQEI Trigger: AATCTCTTGAGACATCTGCATCGTCCATGCTCCTCAAAGTACAAGAGATGGGGTCAGTGGTGGAGGCAGAAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000027128.11 ENSMUST00000160472.8 |
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| CDS CCA 72 bp | ATAGTCATCCCCAAGTCTTCATTCTTCCGCTGTTCCTaGGCCAGCAGGTCTTGGGTTGTTTTCATAGAGCTG | + |
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Preference number: 6 (lower is better) Translates to: IVIPKSSFFRCS*ASRSWVVFIEL Trigger: CAGCTCTATGAAAACAACCCAAGACCTGCTGGCCCAGGAACAGCGGAAGAATGAAGACTTGGGGATGACTAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000027128.11 ENSMUST00000160472.8 |
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| CDS CCA 72 bp | AGTACTGTGAACGTTTCAGAAGCTGTCCCATTGATGTaGGTTGGAGACAGGACTGGTCTGCACACTGTAGTT | + |
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Preference number: 6 (lower is better) Translates to: STVNVSEAVPLM*VGDRTGLHTVV Trigger: AACTACAGTGTGCAGACCAGTCCTGTCTCCAACCCACATCAATGGGACAGCTTCTGAAACGTTCACAGTACT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000027128.11 ENSMUST00000160472.8 |
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| CDS CAA 90 bp | CATTTCATCCTGTGCCCTGTCTTCTTCCTCCTTGACAACTTTCAATaGCTGGCGCAAATTCATCACTTCAAGTTGCAACAGCTTCAGGCC | + |
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Preference number: 6 (lower is better) Translates to: HFILCPVFFLLDNFQ*LAQIHHFKLQQLQA Trigger: GGCCTGAAGCTGTTGCAACTTGAAGTGATGAATTTGCGCCAGCAATTGAAAGTTGTCAAGGAGGAAGAAGACAGGGCACAGGATGAAATG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000027128.11 ENSMUST00000160472.8 |
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| CDS CAA 90 bp | CAACTTCTGGCTCTCTTTCAGGGCAGCATCTCGACACTTCACTGCTaGGGCCAGTTCTTCCTCATTTTTCCCAAGAATAGATTTCATCGA | + |
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Preference number: 6 (lower is better) Translates to: QLLALFQGSISTLHC*GQFFLIFPKNRFHR Trigger: TCGATGAAATCTATTCTTGGGAAAAATGAGGAAGAACTGGCCCAAGCAGTGAAGTGTCGAGATGCTGCCCTGAAAGAGAGCCAGAAGTTG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000163072.8 |
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| CDS TCA 72 bp | AGATGGTCCTTCTGCAGCATGGTTTCAGCGAATGTGTaGAGCTGTGCTTCTAGCTGTTTAACCTTTGTCTGG | + |
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Preference number: 6 (lower is better) Translates to: RWSFCSMVSANV*SCASSCLTFVW Trigger: CCAGACAAAGGTTAAACAGCTAGAAGCACAGCTTCACACATTCGCTGAAACCATGCTGCAGAAGGACCATCT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027128.11 |
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| CDS GCA 72 bp | ACTTTCAATTGCTGGCGCAAATTCATCACTTCAAGTTaGAACAGCTTCAGGCCCTTGGAATGCTCCCCTTGT | + |
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Preference number: 6 (lower is better) Translates to: TFNCWRKFITSS*NSFRPLECSPC Trigger: ACAAGGGGAGCATTCCAAGGGCCTGAAGCTGTTGCAACTTGAAGTGATGAATTTGCGCCAGCAATTGAAAGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000027128.11 ENSMUST00000160472.8 |
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| CDS GCA 72 bp | TGCTCAAGGATTAAATGGTCTAGGTGTATCTGGAGTTaGGCCTTTTCATTCTGCACAGCTTGGAGCTCTCCT | + |
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Preference number: 6 (lower is better) Translates to: CSRIKWSRCIWS*AFSFCTAWSSP Trigger: AGGAGAGCTCCAAGCTGTGCAGAATGAAAAGGCGCAACTCCAGATACACCTAGACCATTTAATCCTTGAGCA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000027128.11 ENSMUST00000160472.8 |
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| CDS CAA 72 bp | AACTTTCAATTGCTGGCGCAAATTCATCACTTCAAGTaGCAACAGCTTCAGGCCCTTGGAATGCTCCCCTTG | + |
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Preference number: 6 (lower is better) Translates to: NFQLLAQIHHFK*QQLQALGMLPL Trigger: CAAGGGGAGCATTCCAAGGGCCTGAAGCTGTTGCAACTTGAAGTGATGAATTTGCGCCAGCAATTGAAAGTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000027128.11 ENSMUST00000160472.8 |
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| CDS CAA 90 bp | GCAGTCAATCTCTGCATTTCATCCTGTGCCCTGTCTTCTTCCTCCTaGACAACTTTCAATTGCTGGCGCAAATTCATCACTTCAAGTTGC | + |
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Preference number: 6 (lower is better) Translates to: AVNLCISSCALSSSS*TTFNCWRKFITSSC Trigger: GCAACTTGAAGTGATGAATTTGCGCCAGCAATTGAAAGTTGTCAAGGAGGAAGAAGACAGGGCACAGGATGAAATGCAGAGATTGACTGC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000027128.11 ENSMUST00000160472.8 |
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| CDS TCA 72 bp | AGTTGTAGTCCATCGAACCTGCATTTAAACCAGCGGTaGGCCTCTTCCAGATTAGCTGTTATCTGTTCTGAC | + |
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Preference number: 6 (lower is better) Translates to: SCSPSNLHLNQR*ASSRLAVICSD Trigger: GTCAGAACAGATAACAGCTAATCTGGAAGAGGCTCACCGCTGGTTTAAATGCAGGTTCGATGGACTACAACT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000027128.11 ENSMUST00000163072.8 |
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| CDS GCA 72 bp | ATGAGGTTATCTCTGGAATTCAGATCAGACTTGAGCTaGGAGATAGTCATCCCCAAGTCTTCATTCTTCCGC | + |
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Preference number: 6 (lower is better) Translates to: MRLSLEFRSDLS*EIVIPKSSFFR Trigger: GCGGAAGAATGAAGACTTGGGGATGACTATCTCGCAGCTCAAGTCTGATCTGAATTCCAGAGATAACCTCAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000027128.11 ENSMUST00000160472.8 |
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| CDS CAA 72 bp | CTGTGCCCTGTCTTCTTCCTCCTTGACAACTTTCAATaGCTGGCGCAAATTCATCACTTCAAGTTGCAACAG | + |
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Preference number: 6 (lower is better) Translates to: LCPVFFLLDNFQ*LAQIHHFKLQQ Trigger: CTGTTGCAACTTGAAGTGATGAATTTGCGCCAGCAATTGAAAGTTGTCAAGGAGGAAGAAGACAGGGCACAG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000027128.11 ENSMUST00000160472.8 |
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| CDS CAA 90 bp | CTCCTTGACAACTTTCAATTGCTGGCGCAAATTCATCACTTCAAGTaGCAACAGCTTCAGGCCCTTGGAATGCTCCCCTTGTATTATATT | + |
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Preference number: 6 (lower is better) Translates to: LLDNFQLLAQIHHFK*QQLQALGMLPLYYI Trigger: AATATAATACAAGGGGAGCATTCCAAGGGCCTGAAGCTGTTGCAACTTGAAGTGATGAATTTGCGCCAGCAATTGAAAGTTGTCAAGGAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000027128.11 ENSMUST00000160472.8 |
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| CDS CCA 72 bp | CGTATCCTAGCATTATTAGGTCATCTCTCAGAGAGCTaGTCTGTTCCTCAACTATTCTCATCTTCTGCTGAA | + |
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Preference number: 6 (lower is better) Translates to: RILALLGHLSES*SVPQLFSSSAE Trigger: TTCAGCAGAAGATGAGAATAGTTGAGGAACAGACCAGCTCTCTGAGAGATGACCTAATAATGCTAGGATACG 43% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000027128.11 ENSMUST00000160472.8 |
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| CDS CCA 72 bp | AATTCATCACTTCAAGTTGCAACAGCTTCAGGCCCTTaGAATGCTCCCCTTGTATTATATTCAGCTGATCGT | + |
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Preference number: 6 (lower is better) Translates to: NSSLQVATASGP*NAPLVLYSADR Trigger: ACGATCAGCTGAATATAATACAAGGGGAGCATTCCAAGGGCCTGAAGCTGTTGCAACTTGAAGTGATGAATT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000027128.11 ENSMUST00000160472.8 |
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| CDS TCA 72 bp | TTTGCAGGTGAAAGATGTTCATCTTCAAGGACTGAATaGGGTTCTCCAAGTAGCACATTCGATTTACCAGAA | + |
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Preference number: 6 (lower is better) Translates to: FAGERCSSSRTE*GSPSSTFDLPE Trigger: TTCTGGTAAATCGAATGTGCTACTTGGAGAACCTCATTCAGTCCTTGAAGATGAACATCTTTCACCTGCAAA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000027128.11 ENSMUST00000160472.8 |
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| CDS CAA 90 bp | TCTTTCTTGAGAGATATTTGTGTAGCCTTATTTTCTTCCACCAACTaGCAAATGAGGTTATCTCTGGAATTCAGATCAGACTTGAGCTGC | + |
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Preference number: 6 (lower is better) Translates to: SFLRDICVALFSSTN*QMRLSLEFRSDLSC Trigger: GCAGCTCAAGTCTGATCTGAATTCCAGAGATAACCTCATTTGCAAGTTGGTGGAAGAAAATAAGGCTACACAAATATCTCTCAAGAAAGA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000027128.11 ENSMUST00000160472.8 |
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| CDS CCA 72 bp | AAATTCATAGTTCCTCCACAAATTACCTGGGCTTTCTaGACAAATTACTTCATTTGGGATAGGACTAATGGC | + |
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Preference number: 6 (lower is better) Translates to: KFIVPPQITWAF*TNYFIWDRTNG Trigger: GCCATTAGTCCTATCCCAAATGAAGTAATTTGTCCAGAAAGCCCAGGTAATTTGTGGAGGAACTATGAATTT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000027128.11 ENSMUST00000160472.8 |
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