Pregenerated sensors for CCDC148 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000036641Ensembl transcript IDs: ENSMUST00000077687.6, ENSMUST00000226455.2
Found 172 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | CGTAGAACTCTTATAGAGAAGCCAATGTATTCTGACAGGCTGGGCTaGTTTTGTGCACACTTGCCATGCTGTGGGTGGTCACGACAAGCC | + |
|
Preference number: 1 (lower is better) Translates to: RRTLIEKPMYSDRLG*FCAHLPCCGWSRQA Trigger: GGCTTGTCGTGACCACCCACAGCATGGCAAGTGTGCACAAAATCAGCCCAGCCTGTCAGAATACATTGGCTTCTCTATAAGAGTTCTACG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000077687.6 ENSMUST00000226455.2 |
||
| 3UTR CCA 90 bp | GTTAATGTGTCAATAGTGTTTGGACACAATCCCATGACTTTGGTGTaGACATCCAGGACAGTAAGGATCCACAGGCTCAGCAGCATCCAT | + |
|
Preference number: 1 (lower is better) Translates to: VNVSIVFGHNPMTLV*TSRTVRIHRLSSIH Trigger: ATGGATGCTGCTGAGCCTGTGGATCCTTACTGTCCTGGATGTCCACACCAAAGTCATGGGATTGTGTCCAAACACTATTGACACATTAAC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000077687.6 ENSMUST00000226455.2 |
||
| 3UTR-3UTR CCA 90 bp | CCTTTCTCAGAACAGCAGTGCCACATGCCCAAGGTGGTTCCAGCTACGAGTCTTGAAGTAGGGAAGCATTaGGATGGATCCTGGGATGTG | + |
|
Preference number: 2 (lower is better) Translates to: PFSEQQCHMPKVVPATSLEVGKH*DGSWDV Trigger: CACATCCCAGGATCCATCCCAATGCTTCCCTACTTC...AAGACTCGTAGCTGGAACCACCTTGGGCATGTGGCACTGCTGTTCTGAGAAAGG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000226455.2 |
||
| 3UTR-3UTR GCA 90 bp | GGATCCACAGGCTCAGCAGCATCCATATCGCGCTGTTTTGCACACGATGATTTTGATTTTGTGCACACTTaGCATGCTGTGGGTGGTCAC | + |
|
Preference number: 2 (lower is better) Translates to: GSTGSAASISRCFAHDDFDFVHT*HAVGGH Trigger: GTGACCACCCACAGCATGGCAAGTGTGCACAAAATC...AAAATCATCGTGTGCAAAACAGCGCGATATGGATGCTGCTGAGCCTGTGGATCC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000077687.6 ENSMUST00000226455.2 |
||
| 3UTR-3UTR CCA 90 bp | GGATCCACAGGCTCAGCAGCATCCATATCGCGCTGTTTTGCACACGATGATTTTCTCCATCCTCAGCCCTaGGTTTTGTGGTTTTCAGAG | + |
|
Preference number: 2 (lower is better) Translates to: GSTGSAASISRCFAHDDFLHPQP*VLWFSE Trigger: CTCTGAAAACCACAAAACCCAGGGCTGAGGATGGAG...AAAATCATCGTGTGCAAAACAGCGCGATATGGATGCTGCTGAGCCTGTGGATCC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 2 transcripts: ENSMUST00000077687.6 ENSMUST00000226455.2 |
||
| 3UTR-3UTR CCA 90 bp | TACTCCACCTATCCTCAGACTGGCTATAAAGCTGAGGCTGGCCTTGAACCTCTGTCTGGGTGTAGGCAATaGCTAGTCTGCTTTGCTATG | + |
|
Preference number: 2 (lower is better) Translates to: YSTYPQTGYKAEAGLEPLSGCRQ*LVCFAM Trigger: CATAGCAAAGCAGACTAGCCATTGCCTACACCCAGA...CAGAGGTTCAAGGCCAGCCTCAGCTTTATAGCCAGTCTGAGGATAGGTGGAGTA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000226455.2 |
||
| 3UTR-3UTR TCA 90 bp | GGATCCACAGGCTCAGCAGCATCCATATCGCGCTGTTTTGCACACGATGATTTTGAAGCCAATGTATTCTaGCAGGCTGGGCTGATTTTG | + |
|
Preference number: 2 (lower is better) Translates to: GSTGSAASISRCFAHDDFEANVF*QAGLIL Trigger: CAAAATCAGCCCAGCCTGTCAGAATACATTGGCTTC...AAAATCATCGTGTGCAAAACAGCGCGATATGGATGCTGCTGAGCCTGTGGATCC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000077687.6 ENSMUST00000226455.2 |
||
| 3UTR-3UTR GCA 90 bp | TACTCCACCTATCCTCAGACTGGCTATAAAGCTGAGGCTGGCCTTGAACCTCTGCATACAGTTGCTTTGTaGTCCTTTGGCTTTGGAGAC | + |
|
Preference number: 2 (lower is better) Translates to: YSTYPQTGYKAEAGLEPLHTVAL*SFGFGD Trigger: GTCTCCAAAGCCAAAGGAGCACAAAGCAACTGTATG...CAGAGGTTCAAGGCCAGCCTCAGCTTTATAGCCAGTCTGAGGATAGGTGGAGTA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000226455.2 |
||
| 3UTR-3UTR CCA 90 bp | TACTCCACCTATCCTCAGACTGGCTATAAAGCTGAGGCTGGCCTTGAACCTCTGTGTATTCTGACAGGCTaGGCTGATTTTGTGCACACT | + |
|
Preference number: 2 (lower is better) Translates to: YSTYPQTGYKAEAGLEPLCILTG*ADFVHT Trigger: AGTGTGCACAAAATCAGCCCAGCCTGTCAGAATACA...CAGAGGTTCAAGGCCAGCCTCAGCTTTATAGCCAGTCTGAGGATAGGTGGAGTA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000226455.2 |
||
| 3UTR-3UTR CCA 90 bp | GGATCCACAGGCTCAGCAGCATCCATATCGCGCTGTTTTGCACACGATGATTTTTGTATTCTGACAGGCTaGGCTGATTTTGTGCACACT | + |
|
Preference number: 2 (lower is better) Translates to: GSTGSAASISRCFAHDDFCILTG*ADFVHT Trigger: AGTGTGCACAAAATCAGCCCAGCCTGTCAGAATACA...AAAATCATCGTGTGCAAAACAGCGCGATATGGATGCTGCTGAGCCTGTGGATCC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000077687.6 ENSMUST00000226455.2 |
||
| 3UTR CAA 90 bp | GACAGTAAGGATCCACAGGCTCAGCAGCATCCATATCGCGCTGTTTaGCACACGATGATTTTTGTCACAGCAGTTTTCCATGGGTTTATG | + |
|
Preference number: 2 (lower is better) Translates to: DSKDPQAQQHPYRAV*HTMIFVTAVFHGFM Trigger: CATAAACCCATGGAAAACTGCTGTGACAAAAATCATCGTGTGCAAAACAGCGCGATATGGATGCTGCTGAGCCTGTGGATCCTTACTGTC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000077687.6 ENSMUST00000226455.2 |
||
| 3UTR-3UTR TCA 90 bp | GTTAATGTGTCAATAGTGTTTGGACACAATCCCATGACTTTGGTGTGGACATCCTCTGACAGGCTGGGCTaGTTTTGTGCACACTTGCCA | + |
|
Preference number: 2 (lower is better) Translates to: VNVSIVFGHNPMTLVWTSSDRLG*FCAHLP Trigger: TGGCAAGTGTGCACAAAATCAGCCCAGCCTGTCAGA...GGATGTCCACACCAAAGTCATGGGATTGTGTCCAAACACTATTGACACATTAAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000077687.6 ENSMUST00000226455.2 |
||
| 3UTR-3UTR CCA 90 bp | ATATATCCAAGGATGACCTTGACCTCTGATACTCTTGCTTCCCATCTCCCAAGTTCAGAGTCAGAGCTTTaGGCTTCTAGGCAAGTGTCC | + |
|
Preference number: 2 (lower is better) Translates to: IYPRMTLTSDTLASHLPSSESEL*ASRQVS Trigger: GGACACTTGCCTAGAAGCCCAAAGCTCTGACTCTGA...ACTTGGGAGATGGGAAGCAAGAGTATCAGAGGTCAAGGTCATCCTTGGATATAT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000077687.6 ENSMUST00000226455.2 |
||
| 3UTR-3UTR CCA 90 bp | CCTTTCTCAGAACAGCAGTGCCACATGCCCAAGGTGGTTCCAGCTACGAGTCTTTGTGTCAATAGTGTTTaGACACAATCCCATGACTTT | + |
|
Preference number: 2 (lower is better) Translates to: PFSEQQCHMPKVVPATSLCVNSV*TQSHDF Trigger: AAAGTCATGGGATTGTGTCCAAACACTATTGACACA...AAGACTCGTAGCTGGAACCACCTTGGGCATGTGGCACTGCTGTTCTGAGAAAGG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000226455.2 |
||
| 3UTR CAA 90 bp | TGTTCTACCATACAGTTGCTTTGTGCTCCTTTGGCTTTGGAGACATaGGATACTTTGGATACATCATGTAGCCTAGGTTGGCCTCCACCT | + |
|
Preference number: 2 (lower is better) Translates to: CSTIQLLCAPLALET*DTLDTSCSLGWPPP Trigger: AGGTGGAGGCCAACCTAGGCTACATGATGTATCCAAAGTATCCAATGTCTCCAAAGCCAAAGGAGCACAAAGCAACTGTATGGTAGAACA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000226455.2 |
||
| 3UTR-3UTR TCA 90 bp | GGATCCACAGGCTCAGCAGCATCCATATCGCGCTGTTTTGCACACGATGATTTTGGAGTAGACAACCCTTaGAAATGGTTATTTTCAGCT | + |
|
Preference number: 2 (lower is better) Translates to: GSTGSAASISRCFAHDDFGVDNP*KWLFSA Trigger: AGCTGAAAATAACCATTTTCAAGGGTTGTCTACTCC...AAAATCATCGTGTGCAAAACAGCGCGATATGGATGCTGCTGAGCCTGTGGATCC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000077687.6 ENSMUST00000226455.2 |
||
| 3UTR-3UTR TCA 90 bp | TTGCACACGATGATTTTTGTCACAGCAGTTTTCCATGGGTTTATGGTCAGGGTCGATGACCTTGACCTCTaGTACTCTTGCTTCCCATCT | + |
|
Preference number: 2 (lower is better) Translates to: LHTMIFVTAVFHGFMVRVDDLDL*YSCFPS Trigger: AGATGGGAAGCAAGAGTATCAGAGGTCAAGGTCATC...GACCCTGACCATAAACCCATGGAAAACTGCTGTGACAAAAATCATCGTGTGCAA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000077687.6 ENSMUST00000226455.2 |
||
| 3UTR-3UTR GCA 90 bp | TTGCACACGATGATTTTTGTCACAGCAGTTTTCCATGGGTTTATGGTCAGGGTCCCCTTCATCTCTCCTTaGCTGCTCTCTCCTATCTTT | + |
|
Preference number: 2 (lower is better) Translates to: LHTMIFVTAVFHGFMVRVPFISP*LLSPIF Trigger: AAAGATAGGAGAGAGCAGGCAAGGAGAGATGAAGGG...GACCCTGACCATAAACCCATGGAAAACTGCTGTGACAAAAATCATCGTGTGCAA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000077687.6 ENSMUST00000226455.2 |
||
| 3UTR-3UTR GCA 90 bp | TGCTTTGTGCTCCTTTGGCTTTGGAGACATTGGATACTTTGGATACATCATGTATGTGCACACTTGCCATaGTGTGGGTGGTCACGACAA | + |
|
Preference number: 2 (lower is better) Translates to: CFVLLWLWRHWILWIHHVCAHLP*CGWSRQ Trigger: TTGTCGTGACCACCCACAGCATGGCAAGTGTGCACA...TACATGATGTATCCAAAGTATCCAATGTCTCCAAAGCCAAAGGAGCACAAAGCA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000226455.2 |
||
| 3UTR-3UTR CCA 90 bp | ATATATCCAAGGATGACCTTGACCTCTGATACTCTTGCTTCCCATCTCCCAAGTCAGCCCTGGGTTTTGTaGTTTTCAGAGCATTCTCAG | + |
|
Preference number: 2 (lower is better) Translates to: IYPRMTLTSDTLASHLPSQPWVL*FSEHSQ Trigger: CTGAGAATGCTCTGAAAACCACAAAACCCAGGGCTG...ACTTGGGAGATGGGAAGCAAGAGTATCAGAGGTCAAGGTCATCCTTGGATATAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000077687.6 ENSMUST00000226455.2 |
||
| 3UTR-3UTR CCA 90 bp | TACCATACAGTTGCTTTGTGCTCCTTTGGCTTTGGAGACATTGGATACTTTGGATCAGAGTCAGAGCTTTaGGCTTCTAGGCAAGTGTCC | + |
|
Preference number: 2 (lower is better) Translates to: YHTVALCSFGFGDIGYFGSESEL*ASRQVS Trigger: GGACACTTGCCTAGAAGCCCAAAGCTCTGACTCTGA...TCCAAAGTATCCAATGTCTCCAAAGCCAAAGGAGCACAAAGCAACTGTATGGTA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000226455.2 |
||
| 3UTR-3UTR CCA 90 bp | TACTCCACCTATCCTCAGACTGGCTATAAAGCTGAGGCTGGCCTTGAACCTCTGTTTTCCATGGGTTTATaGTCAGGGTCCCATAAAATA | + |
|
Preference number: 2 (lower is better) Translates to: YSTYPQTGYKAEAGLEPLFSMGL*SGSHKI Trigger: TATTTTATGGGACCCTGACCATAAACCCATGGAAAA...CAGAGGTTCAAGGCCAGCCTCAGCTTTATAGCCAGTCTGAGGATAGGTGGAGTA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000226455.2 |
||
| 3UTR-3UTR TCA 90 bp | CAAGTACCATACAGAAAGCACATGCTAATGCTAAGCATTCAGTGTGTACTCAGGCATGTGGTTGGTTGCTaGGAATTAAACTCAGGACCC | + |
|
Preference number: 2 (lower is better) Translates to: QVPYRKHMLMLSIQCVLRHVVGC*ELNSGP Trigger: GGGTCCTGAGTTTAATTCTCAGCAACCAACCACATG...CCTGAGTACACACTGAATGCTTAGCATTAGCATGTGCTTTCTGTATGGTACTTG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000226455.2 |
||
| 3UTR-3UTR GCA 90 bp | GTTAATGTGTCAATAGTGTTTGGACACAATCCCATGACTTTGGTGTGGACATCCCCCTTCATCTCTCCTTaGCTGCTCTCTCCTATCTTT | + |
|
Preference number: 2 (lower is better) Translates to: VNVSIVFGHNPMTLVWTSPFISP*LLSPIF Trigger: AAAGATAGGAGAGAGCAGGCAAGGAGAGATGAAGGG...GGATGTCCACACCAAAGTCATGGGATTGTGTCCAAACACTATTGACACATTAAC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000077687.6 ENSMUST00000226455.2 |
||
| 3UTR-3UTR GCA 90 bp | TGCTTTGTGCTCCTTTGGCTTTGGAGACATTGGATACTTTGGATACATCATGTAGATTTTGTGCACACTTaGCATGCTGTGGGTGGTCAC | + |
|
Preference number: 2 (lower is better) Translates to: CFVLLWLWRHWILWIHHVDFVHT*HAVGGH Trigger: GTGACCACCCACAGCATGGCAAGTGTGCACAAAATC...TACATGATGTATCCAAAGTATCCAATGTCTCCAAAGCCAAAGGAGCACAAAGCA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000226455.2 |
||
| 3UTR-3UTR CCA 90 bp | GGATCCACAGGCTCAGCAGCATCCATATCGCGCTGTTTTGCACACGATGATTTTTTTTCCATGGGTTTATaGTCAGGGTCCCATAAAATA | + |
|
Preference number: 2 (lower is better) Translates to: GSTGSAASISRCFAHDDFFSMGL*SGSHKI Trigger: TATTTTATGGGACCCTGACCATAAACCCATGGAAAA...AAAATCATCGTGTGCAAAACAGCGCGATATGGATGCTGCTGAGCCTGTGGATCC 44% GC, longest homopolymer 8 nt, total homopolymer stretches 16 nt. Matches the following 2 transcripts: ENSMUST00000077687.6 ENSMUST00000226455.2 |
||
| 3UTR CAA 90 bp | ATACAGTTGCTTTGTGCTCCTTTGGCTTTGGAGACATTGGATACTTaGGATACATCATGTAGCCTAGGTTGGCCTCCACCTATTGGTTTA | + |
|
Preference number: 2 (lower is better) Translates to: IQLLCAPLALETLDT*DTSCSLGWPPPIGL Trigger: TAAACCAATAGGTGGAGGCCAACCTAGGCTACATGATGTATCCAAAGTATCCAATGTCTCCAAAGCCAAAGGAGCACAAAGCAACTGTAT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000226455.2 |
||
| 3UTR-3UTR TCA 90 bp | TTGCACACGATGATTTTTGTCACAGCAGTTTTCCATGGGTTTATGGTCAGGGTCACTGAAGTAACAAGCTaGAATGCATGTACCTGTGGA | + |
|
Preference number: 2 (lower is better) Translates to: LHTMIFVTAVFHGFMVRVTEVTS*NACTCG Trigger: TCCACAGGTACATGCATTTCAGCTTGTTACTTCAGT...GACCCTGACCATAAACCCATGGAAAACTGCTGTGACAAAAATCATCGTGTGCAA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000077687.6 ENSMUST00000226455.2 |
||
| 3UTR CAA 90 bp | TCCATGCCTACCACTCTCTACCTTTTCCTAAGACTTCTCCATTCTTaGATGAGACATTATAGTGCTGTAAAGAGCAGAAGTAGGGAAGCA | + |
|
Preference number: 2 (lower is better) Translates to: SMPTTLYLFLRLLHS*MRHYSAVKSRSREA Trigger: TGCTTCCCTACTTCTGCTCTTTACAGCACTATAATGTCTCATCAAAGAATGGAGAAGTCTTAGGAAAAGGTAGAGAGTGGTAGGCATGGA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000077687.6 ENSMUST00000226455.2 |
||
| 3UTR-3UTR TCA 90 bp | TACCTTTTCCTAAGACTTCTCCATTCTTTGATGAGACATTATAGTGCTGTAAAGTCTGACAGGCTGGGCTaGTTTTGTGCACACTTGCCA | + |
|
Preference number: 2 (lower is better) Translates to: YLFLRLLHSLMRHYSAVKSDRLG*FCAHLP Trigger: TGGCAAGTGTGCACAAAATCAGCCCAGCCTGTCAGA...CTTTACAGCACTATAATGTCTCATCAAAGAATGGAGAAGTCTTAGGAAAAGGTA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000077687.6 ENSMUST00000226455.2 |
||
| 3UTR-3UTR TCA 90 bp | GATGATCAAGTACCATACAGAAAGCACATGCTAATGCTAAGCATTCAGTGTGTAGAAGCCAATGTATTCTaGCAGGCTGGGCTGATTTTG | + |
|
Preference number: 2 (lower is better) Translates to: DDQVPYRKHMLMLSIQCVEANVF*QAGLIL Trigger: CAAAATCAGCCCAGCCTGTCAGAATACATTGGCTTC...TACACACTGAATGCTTAGCATTAGCATGTGCTTTCTGTATGGTACTTGATCATC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000226455.2 |
||
| 3UTR-3UTR TCA 90 bp | CAAGTACCATACAGAAAGCACATGCTAATGCTAAGCATTCAGTGTGTACTCAGGGGAGTAGACAACCCTTaGAAATGGTTATTTTCAGCT | + |
|
Preference number: 2 (lower is better) Translates to: QVPYRKHMLMLSIQCVLRGVDNP*KWLFSA Trigger: AGCTGAAAATAACCATTTTCAAGGGTTGTCTACTCC...CCTGAGTACACACTGAATGCTTAGCATTAGCATGTGCTTTCTGTATGGTACTTG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000226455.2 |
||
| 3UTR-3UTR GCA 90 bp | ATATATCCAAGGATGACCTTGACCTCTGATACTCTTGCTTCCCATCTCCCAAGTTCTAAACAACCACACTaGCATGTCTTCTCAGTTAAA | + |
|
Preference number: 2 (lower is better) Translates to: IYPRMTLTSDTLASHLPSSKQPH*HVFSVK Trigger: TTTAACTGAGAAGACATGGCAGTGTGGTTGTTTAGA...ACTTGGGAGATGGGAAGCAAGAGTATCAGAGGTCAAGGTCATCCTTGGATATAT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000077687.6 ENSMUST00000226455.2 |
||
| 3UTR-3UTR CCA 90 bp | TACCTTTTCCTAAGACTTCTCCATTCTTTGATGAGACATTATAGTGCTGTAAAGGAAGTAGGGAAGCATTaGGATGGATCCTGGGATGTG | + |
|
Preference number: 2 (lower is better) Translates to: YLFLRLLHSLMRHYSAVKEVGKH*DGSWDV Trigger: CACATCCCAGGATCCATCCCAATGCTTCCCTACTTC...CTTTACAGCACTATAATGTCTCATCAAAGAATGGAGAAGTCTTAGGAAAAGGTA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000077687.6 ENSMUST00000226455.2 |
||
| 3UTR CAA 90 bp | GCTCTCCAATCCACACTAACACATACTTATTTCCTTTGTCTTTCTTaGAGACAATGTCTGATATACTCCACCTATCCTCAGACTGGCTAT | + |
|
Preference number: 2 (lower is better) Translates to: ALQSTLTHTYFLCLS*RQCLIYSTYPQTGY Trigger: ATAGCCAGTCTGAGGATAGGTGGAGTATATCAGACATTGTCTCAAAGAAAGACAAAGGAAATAAGTATGTGTTAGTGTGGATTGGAGAGC 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000226455.2 |
||
| 3UTR-3UTR CCA 90 bp | ATATATCCAAGGATGACCTTGACCTCTGATACTCTTGCTTCCCATCTCCCAAGTGAGTGTTCAGATAATTaGTTTGCCATAAACATGATG | + |
|
Preference number: 2 (lower is better) Translates to: IYPRMTLTSDTLASHLPSECSDN*FAINMM Trigger: CATCATGTTTATGGCAAACCAATTATCTGAACACTC...ACTTGGGAGATGGGAAGCAAGAGTATCAGAGGTCAAGGTCATCCTTGGATATAT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000077687.6 ENSMUST00000226455.2 |
||
| 3UTR-3UTR CCA 90 bp | TACCTTTTCCTAAGACTTCTCCATTCTTTGATGAGACATTATAGTGCTGTAAAGCAGCCCTGGGTTTTGTaGTTTTCAGAGCATTCTCAG | + |
|
Preference number: 2 (lower is better) Translates to: YLFLRLLHSLMRHYSAVKQPWVL*FSEHSQ Trigger: CTGAGAATGCTCTGAAAACCACAAAACCCAGGGCTG...CTTTACAGCACTATAATGTCTCATCAAAGAATGGAGAAGTCTTAGGAAAAGGTA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000077687.6 ENSMUST00000226455.2 |
||
| 3UTR-3UTR TCA 90 bp | ACTCTCTACCTTTTCCTAAGACTTCTCCATTCTTTGATGAGACATTATAGTGCTACTGAAGTAACAAGCTaGAATGCATGTACCTGTGGA | + |
|
Preference number: 2 (lower is better) Translates to: TLYLFLRLLHSLMRHYSATEVTS*NACTCG Trigger: TCCACAGGTACATGCATTTCAGCTTGTTACTTCAGT...AGCACTATAATGTCTCATCAAAGAATGGAGAAGTCTTAGGAAAAGGTAGAGAGT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000077687.6 ENSMUST00000226455.2 |
||
| 3UTR-3UTR GCA 90 bp | CAAGTACCATACAGAAAGCACATGCTAATGCTAAGCATTCAGTGTGTACTCAGGAGGTTGTTTAATAAATaGTGTGATTTCTCTGTGCAG | + |
|
Preference number: 2 (lower is better) Translates to: QVPYRKHMLMLSIQCVLRRLFNK*CDFSVQ Trigger: CTGCACAGAGAAATCACAGCATTTATTAAACAACCT...CCTGAGTACACACTGAATGCTTAGCATTAGCATGTGCTTTCTGTATGGTACTTG 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000226455.2 |
||
| 3UTR-3UTR CCA 90 bp | AAAAGAGTTAATGTGTCAATAGTGTTTGGACACAATCCCATGACTTTGGTGTGGGAGTGTTCAGATAATTaGTTTGCCATAAACATGATG | + |
|
Preference number: 2 (lower is better) Translates to: KRVNVSIVFGHNPMTLVWECSDN*FAINMM Trigger: CATCATGTTTATGGCAAACCAATTATCTGAACACTC...CCACACCAAAGTCATGGGATTGTGTCCAAACACTATTGACACATTAACTCTTTT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000077687.6 ENSMUST00000226455.2 |
||
| 3UTR-3UTR GCA 90 bp | TCTCAGTTAAAAACAAAAACAGGTATTCCCGTGATAGTGACACTGTCTAATTTCAGGTTGTTTAATAAATaGTGTGATTTCTCTGTGCAG | + |
|
Preference number: 2 (lower is better) Translates to: SQLKTKTGIPVIVTLSNFRLFNK*CDFSVQ Trigger: CTGCACAGAGAAATCACAGCATTTATTAAACAACCT...GAAATTAGACAGTGTCACTATCACGGGAATACCTGTTTTTGTTTTTAACTGAGA 34% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000077687.6 ENSMUST00000226455.2 |
||
| 3UTR TCA 72 bp | AGTCAGAGCTTTGGGCTTCTAGGCAAGTGTCCTAGCTaGGCTCCATCCTCAGCCCTGGGTTTTGTGGTTTTC | + |
|
Preference number: 3 (lower is better) Translates to: SQSFGLLGKCPS*APSSALGFVVF Trigger: GAAAACCACAAAACCCAGGGCTGAGGATGGAGCTCAGCTAGGACACTTGCCTAGAAGCCCAAAGCTCTGACT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000077687.6 ENSMUST00000226455.2 |
||
| 3UTR GCA 72 bp | TGTATTCTGACAGGCTGGGCTGATTTTGTGCACACTTaGCATGCTGTGGGTGGTCACGACAAGCCCCAATCA | + |
|
Preference number: 3 (lower is better) Translates to: CILTGWADFVHT*HAVGGHDKPQS Trigger: TGATTGGGGCTTGTCGTGACCACCCACAGCATGGCAAGTGTGCACAAAATCAGCCCAGCCTGTCAGAATACA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000077687.6 ENSMUST00000226455.2 |
||
| 3UTR GCA 72 bp | CACAGTGTAGGATGTCTCCCTTTCTCAGAACAGCAGTaGCACATGCCCAAGGTGGTTCCAGCTACGAGTCTT | + |
|
Preference number: 3 (lower is better) Translates to: HSVGCLPFSEQQ*HMPKVVPATSL Trigger: AAGACTCGTAGCTGGAACCACCTTGGGCATGTGGCACTGCTGTTCTGAGAAAGGGAGACATCCTACACTGTG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000226455.2 |
||
| 3UTR-3UTR CAA 90 bp | TACTCCACCTATCCTCAGACTGGCTATAAAGCTGAGGCTGGCCTTGAACCTCTGAGAAGTAGGGAAGCATaGGGATGGATCCTGGGATGT | + |
|
Preference number: 3 (lower is better) Translates to: YSTYPQTGYKAEAGLEPLRSREA*GWILGC Trigger: ACATCCCAGGATCCATCCCAATGCTTCCCTACTTCT...CAGAGGTTCAAGGCCAGCCTCAGCTTTATAGCCAGTCTGAGGATAGGTGGAGTA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000226455.2 |
||
| 3UTR TCA 72 bp | AGACTGGCTATAAAGCTGAGGCTGGCCTTGAACCTCTaGTCTTCCTGCTTCTACCTCCCAAGTGTTCCTAAG | + |
|
Preference number: 3 (lower is better) Translates to: RLAIKLRLALNL*SSCFYLPSVPK Trigger: CTTAGGAACACTTGGGAGGTAGAAGCAGGAAGATCAGAGGTTCAAGGCCAGCCTCAGCTTTATAGCCAGTCT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000226455.2 |
||
| 3UTR CCA 72 bp | TCAATAGTGTTTGGACACAATCCCATGACTTTGGTGTaGACATCCAGGACAGTAAGGATCCACAGGCTCAGC | + |
|
Preference number: 3 (lower is better) Translates to: SIVFGHNPMTLV*TSRTVRIHRLS Trigger: GCTGAGCCTGTGGATCCTTACTGTCCTGGATGTCCACACCAAAGTCATGGGATTGTGTCCAAACACTATTGA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000077687.6 ENSMUST00000226455.2 |
||
| 3UTR-3UTR CAA 90 bp | TTGCACACGATGATTTTTGTCACAGCAGTTTTCCATGGGTTTATGGTCAGGGTCCCTCAGCCCTGGGTTTaGTGGTTTTCAGAGCATTCT | + |
|
Preference number: 3 (lower is better) Translates to: LHTMIFVTAVFHGFMVRVPQPWV*WFSEHS Trigger: AGAATGCTCTGAAAACCACAAAACCCAGGGCTGAGG...GACCCTGACCATAAACCCATGGAAAACTGCTGTGACAAAAATCATCGTGTGCAA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000077687.6 ENSMUST00000226455.2 |
||
| 3UTR-3UTR CAA 90 bp | CTCAATTTTCCTCACAACCACAGTGTAGGATGTCTCCCTTTCTCAGAACAGCAGTATCCAAGGATGACCTaGACCTCTGATACTCTTGCT | + |
|
Preference number: 3 (lower is better) Translates to: LNFPHNHSVGCLPFSEQQYPRMT*TSDTLA Trigger: AGCAAGAGTATCAGAGGTCAAGGTCATCCTTGGATA...CTGCTGTTCTGAGAAAGGGAGACATCCTACACTGTGGTTGTGAGGAAAATTGAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000226455.2 |
||
| 3UTR-3UTR CAA 90 bp | TACTCCACCTATCCTCAGACTGGCTATAAAGCTGAGGCTGGCCTTGAACCTCTGAGACTTCTCCATTCTTaGATGAGACATTATAGTGCT | + |
|
Preference number: 3 (lower is better) Translates to: YSTYPQTGYKAEAGLEPLRLLHS*MRHYSA Trigger: AGCACTATAATGTCTCATCAAAGAATGGAGAAGTCT...CAGAGGTTCAAGGCCAGCCTCAGCTTTATAGCCAGTCTGAGGATAGGTGGAGTA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000226455.2 |
||
| 3UTR CCA 72 bp | AGAAAACAGTCAGAGACCGAGTCTGGGTGTAGGCAATaGCTAGTCTGCTTTGCTATGCATATATCCACTCAA | + |
|
Preference number: 3 (lower is better) Translates to: RKQSETESGCRQ*LVCFAMHISTQ Trigger: TTGAGTGGATATATGCATAGCAAAGCAGACTAGCCATTGCCTACACCCAGACTCGGTCTCTGACTGTTTTCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000226455.2 |
||
| 3UTR CCA 72 bp | GTTCTACCATACAGTTGCTTTGTGCTCCTTTGGCTTTaGAGACATTGGATACTTTGGATACATCATGTAGCC | + |
|
Preference number: 3 (lower is better) Translates to: VLPYSCFVLLWL*RHWILWIHHVA Trigger: GGCTACATGATGTATCCAAAGTATCCAATGTCTCCAAAGCCAAAGGAGCACAAAGCAACTGTATGGTAGAAC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000226455.2 |
||
| 3UTR-3UTR CAA 90 bp | ATATATCCAAGGATGACCTTGACCTCTGATACTCTTGCTTCCCATCTCCCAAGTTGGAGTAGACAACCCTaGAAAATGGTTATTTTCAGC | + |
|
Preference number: 3 (lower is better) Translates to: IYPRMTLTSDTLASHLPSWSRQP*KMVIFS Trigger: GCTGAAAATAACCATTTTCAAGGGTTGTCTACTCCA...ACTTGGGAGATGGGAAGCAAGAGTATCAGAGGTCAAGGTCATCCTTGGATATAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000077687.6 ENSMUST00000226455.2 |
||
| 3UTR-3UTR CAA 90 bp | TTGCACACGATGATTTTTGTCACAGCAGTTTTCCATGGGTTTATGGTCAGGGTCTGGAGTAGACAACCCTaGAAAATGGTTATTTTCAGC | + |
|
Preference number: 3 (lower is better) Translates to: LHTMIFVTAVFHGFMVRVWSRQP*KMVIFS Trigger: GCTGAAAATAACCATTTTCAAGGGTTGTCTACTCCA...GACCCTGACCATAAACCCATGGAAAACTGCTGTGACAAAAATCATCGTGTGCAA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 2 transcripts: ENSMUST00000077687.6 ENSMUST00000226455.2 |
||
| 3UTR-3UTR CAA 90 bp | TTGCACACGATGATTTTTGTCACAGCAGTTTTCCATGGGTTTATGGTCAGGGTCAGACTTCTCCATTCTTaGATGAGACATTATAGTGCT | + |
|
Preference number: 3 (lower is better) Translates to: LHTMIFVTAVFHGFMVRVRLLHS*MRHYSA Trigger: AGCACTATAATGTCTCATCAAAGAATGGAGAAGTCT...GACCCTGACCATAAACCCATGGAAAACTGCTGTGACAAAAATCATCGTGTGCAA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000077687.6 ENSMUST00000226455.2 |
||
| 3UTR-3UTR CAA 90 bp | TACCATACAGTTGCTTTGTGCTCCTTTGGCTTTGGAGACATTGGATACTTTGGACTCCAAAATAACAGCTaGCCAAATGACAACATCTAT | + |
|
Preference number: 3 (lower is better) Translates to: YHTVALCSFGFGDIGYFGLQNNS*PNDNIY Trigger: ATAGATGTTGTCATTTGGCAAGCTGTTATTTTGGAG...TCCAAAGTATCCAATGTCTCCAAAGCCAAAGGAGCACAAAGCAACTGTATGGTA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000226455.2 |
||
| 3UTR GCA 72 bp | CAAGTGTTCCTAAGTAAGAATGTTCTACCATACAGTTaGTTTGTGCTCCTTTGGCTTTGGAGACATTGGATA | + |
|
Preference number: 3 (lower is better) Translates to: QVFLSKNVLPYS*FVLLWLWRHWI Trigger: TATCCAATGTCTCCAAAGCCAAAGGAGCACAAAGCAACTGTATGGTAGAACATTCTTACTTAGGAACACTTG 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000226455.2 |
||
| 3UTR CCA 72 bp | AAGAATGTTCTACCATACAGTTGCTTTGTGCTCCTTTaGCTTTGGAGACATTGGATACTTTGGATACATCAT | + |
|
Preference number: 3 (lower is better) Translates to: KNVLPYSCFVLL*LWRHWILWIHH Trigger: ATGATGTATCCAAAGTATCCAATGTCTCCAAAGCCAAAGGAGCACAAAGCAACTGTATGGTAGAACATTCTT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000226455.2 |
||
| 3UTR-3UTR CAA 90 bp | TCTCAGTTAAAAACAAAAACAGGTATTCCCGTGATAGTGACACTGTCTAATTTCCTCCAAAATAACAGCTaGCCAAATGACAACATCTAT | + |
|
Preference number: 3 (lower is better) Translates to: SQLKTKTGIPVIVTLSNFLQNNS*PNDNIY Trigger: ATAGATGTTGTCATTTGGCAAGCTGTTATTTTGGAG...GAAATTAGACAGTGTCACTATCACGGGAATACCTGTTTTTGTTTTTAACTGAGA 36% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 2 transcripts: ENSMUST00000077687.6 ENSMUST00000226455.2 |
||
| CDS-3UTR TCA 90 bp | CCTTTCTCAGAACAGCAGTGCCACATGCCCAAGGTGGTTCCAGCTACGAGTCTTCCTGCTTGTGTTGCTTaGTCAGCATCTGCTCTTTCG | + |
|
Preference number: 4 (lower is better) Translates to: PFSEQQCHMPKVVPATSLPACVA*SASALS Trigger: CGAAAGAGCAGATGCTGATCAAGCAACACAAGCAGG...AAGACTCGTAGCTGGAACCACCTTGGGCATGTGGCACTGCTGTTCTGAGAAAGG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000226455.2 |
||
| CDS-3UTR GCA 90 bp | GGATCCACAGGCTCAGCAGCATCCATATCGCGCTGTTTTGCACACGATGATTTTAGCCTCTCCTGTTCCTaGCACCACACCTGCTTGTGT | + |
|
Preference number: 4 (lower is better) Translates to: GSTGSAASISRCFAHDDFSLSCS*HHTCLC Trigger: ACACAAGCAGGTGTGGTGGCAGGAACAGGAGAGGCT...AAAATCATCGTGTGCAAAACAGCGCGATATGGATGCTGCTGAGCCTGTGGATCC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000077687.6 ENSMUST00000226455.2 |
||
| 3UTR CAA 72 bp | AGTGTCCTAGCTGAGCTCCATCCTCAGCCCTGGGTTTaGTGGTTTTCAGAGCATTCTCAGAACTACCTAGAG | + |
|
Preference number: 4 (lower is better) Translates to: SVLAELHPQPWV*WFSEHSQNYLE Trigger: CTCTAGGTAGTTCTGAGAATGCTCTGAAAACCACAAAACCCAGGGCTGAGGATGGAGCTCAGCTAGGACACT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000077687.6 ENSMUST00000226455.2 |
||
| CDS-3UTR TCA 90 bp | TACTCCACCTATCCTCAGACTGGCTATAAAGCTGAGGCTGGCCTTGAACCTCTGTTCCTTGGAGGCTTCTaGGGACCAATTTTTGGTAAC | + |
|
Preference number: 4 (lower is better) Translates to: YSTYPQTGYKAEAGLEPLFLGGF*GPIFGN Trigger: GTTACCAAAAATTGGTCCTCAGAAGCCTCCAAGGAA...CAGAGGTTCAAGGCCAGCCTCAGCTTTATAGCCAGTCTGAGGATAGGTGGAGTA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000226455.2 |
||
| CDS-3UTR GCA 90 bp | ATATATCCAAGGATGACCTTGACCTCTGATACTCTTGCTTCCCATCTCCCAAGTAGCCTCTCCTGTTCCTaGCACCACACCTGCTTGTGT | + |
|
Preference number: 4 (lower is better) Translates to: IYPRMTLTSDTLASHLPSSLSCS*HHTCLC Trigger: ACACAAGCAGGTGTGGTGGCAGGAACAGGAGAGGCT...ACTTGGGAGATGGGAAGCAAGAGTATCAGAGGTCAAGGTCATCCTTGGATATAT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000077687.6 ENSMUST00000226455.2 |
||
| CDS-3UTR TCA 90 bp | ATATATCCAAGGATGACCTTGACCTCTGATACTCTTGCTTCCCATCTCCCAAGTCCAGGCCAGTGTCTCTaGCATCATTCTAACTGGGTC | + |
|
Preference number: 4 (lower is better) Translates to: IYPRMTLTSDTLASHLPSPGQCL*HHSNWV Trigger: GACCCAGTTAGAATGATGTCAGAGACACTGGCCTGG...ACTTGGGAGATGGGAAGCAAGAGTATCAGAGGTCAAGGTCATCCTTGGATATAT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000077687.6 ENSMUST00000226455.2 |
||
| CDS-3UTR GCA 90 bp | ATATATCCAAGGATGACCTTGACCTCTGATACTCTTGCTTCCCATCTCCCAAGTACAGCAACAGCAACCTaGTTTCGTAGGGCTTCCAGC | + |
|
Preference number: 4 (lower is better) Translates to: IYPRMTLTSDTLASHLPSTATAT*FRRASS Trigger: GCTGGAAGCCCTACGAAAGCAGGTTGCTGTTGCTGT...ACTTGGGAGATGGGAAGCAAGAGTATCAGAGGTCAAGGTCATCCTTGGATATAT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000077687.6 ENSMUST00000226455.2 |
||
| CDS-3UTR TCA 90 bp | GGATCCACAGGCTCAGCAGCATCCATATCGCGCTGTTTTGCACACGATGATTTTCCTTGGATTGTTTCTTaGCAAAGTCAACCTCTTCCA | + |
|
Preference number: 4 (lower is better) Translates to: GSTGSAASISRCFAHDDFPWIVS*QSQPLP Trigger: TGGAAGAGGTTGACTTTGTCAAGAAACAATCCAAGG...AAAATCATCGTGTGCAAAACAGCGCGATATGGATGCTGCTGAGCCTGTGGATCC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000077687.6 ENSMUST00000226455.2 |
||
| CDS-3UTR CCA 90 bp | GTTAATGTGTCAATAGTGTTTGGACACAATCCCATGACTTTGGTGTGGACATCCCTAACTGGGTCAGACTaGACAGCAACAGCAACCTGC | + |
|
Preference number: 4 (lower is better) Translates to: VNVSIVFGHNPMTLVWTSLTGSD*TATATC Trigger: GCAGGTTGCTGTTGCTGTCCAGTCTGACCCAGTTAG...GGATGTCCACACCAAAGTCATGGGATTGTGTCCAAACACTATTGACACATTAAC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000077687.6 ENSMUST00000226455.2 |
||
| CDS-3UTR CCA 90 bp | CTCAATTTTCCTCACAACCACAGTGTAGGATGTCTCCCTTTCTCAGAACAGCAGCCCTTGACGTCTCTATaGCTTTTTGGAGCTTCTGCT | + |
|
Preference number: 4 (lower is better) Translates to: LNFPHNHSVGCLPFSEQQPLTSL*LFGASA Trigger: AGCAGAAGCTCCAAAAAGCCATAGAGACGTCAAGGG...CTGCTGTTCTGAGAAAGGGAGACATCCTACACTGTGGTTGTGAGGAAAATTGAG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000226455.2 |
||
| 3UTR CAA 72 bp | GATCCACAGGCTCAGCAGCATCCATATCGCGCTGTTTaGCACACGATGATTTTTGTCACAGCAGTTTTCCAT | + |
|
Preference number: 4 (lower is better) Translates to: DPQAQQHPYRAV*HTMIFVTAVFH Trigger: ATGGAAAACTGCTGTGACAAAAATCATCGTGTGCAAAACAGCGCGATATGGATGCTGCTGAGCCTGTGGATC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000077687.6 ENSMUST00000226455.2 |
||
| 3UTR CAA 72 bp | CTTTGTGCTCCTTTGGCTTTGGAGACATTGGATACTTaGGATACATCATGTAGCCTAGGTTGGCCTCCACCT | + |
|
Preference number: 4 (lower is better) Translates to: LCAPLALETLDT*DTSCSLGWPPP Trigger: AGGTGGAGGCCAACCTAGGCTACATGATGTATCCAAAGTATCCAATGTCTCCAAAGCCAAAGGAGCACAAAG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000226455.2 |
||
| CDS-3UTR TCA 90 bp | TTGCACACGATGATTTTTGTCACAGCAGTTTTCCATGGGTTTATGGTCAGGGTCGAGCTGTCATTTCTCTaGATCATCATGAAGGGCCAG | + |
|
Preference number: 4 (lower is better) Translates to: LHTMIFVTAVFHGFMVRVELSFL*IIMKGQ Trigger: CTGGCCCTTCATGATGATTCAGAGAAATGACAGCTC...GACCCTGACCATAAACCCATGGAAAACTGCTGTGACAAAAATCATCGTGTGCAA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000226455.2 |
||
| CDS-3UTR TCA 90 bp | CTCAATTTTCCTCACAACCACAGTGTAGGATGTCTCCCTTTCTCAGAACAGCAGGACTGCCAGGATATCTaGGCTGTCATTTCTCTGAAT | + |
|
Preference number: 4 (lower is better) Translates to: LNFPHNHSVGCLPFSEQQDCQDI*AVISLN Trigger: ATTCAGAGAAATGACAGCTCAGATATCCTGGCAGTC...CTGCTGTTCTGAGAAAGGGAGACATCCTACACTGTGGTTGTGAGGAAAATTGAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000226455.2 |
||
| CDS-3UTR GCA 90 bp | CAAGTACCATACAGAAAGCACATGCTAATGCTAAGCATTCAGTGTGTACTCAGGGCTTTTTGGAGCTTCTaGTCTGTGGAAGCAGACGCA | + |
|
Preference number: 4 (lower is better) Translates to: QVPYRKHMLMLSIQCVLRAFWSF*SVEADA Trigger: TGCGTCTGCTTCCACAGAGCAGAAGCTCCAAAAAGC...CCTGAGTACACACTGAATGCTTAGCATTAGCATGTGCTTTCTGTATGGTACTTG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000226455.2 |
||
| CDS-3UTR CCA 90 bp | CTCAATTTTCCTCACAACCACAGTGTAGGATGTCTCCCTTTCTCAGAACAGCAGGTCTCTATGGCTTTTTaGAGCTTCTGCTCTGTGGAA | + |
|
Preference number: 4 (lower is better) Translates to: LNFPHNHSVGCLPFSEQQVSMAF*SFCSVE Trigger: TTCCACAGAGCAGAAGCTCCAAAAAGCCATAGAGAC...CTGCTGTTCTGAGAAAGGGAGACATCCTACACTGTGGTTGTGAGGAAAATTGAG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000226455.2 |
||
| 3UTR CAA 72 bp | AATGTGTCAATAGTGTTTGGACACAATCCCATGACTTaGGTGTGGACATCCAGGACAGTAAGGATCCACAGG | + |
|
Preference number: 4 (lower is better) Translates to: NVSIVFGHNPMT*VWTSRTVRIHR Trigger: CCTGTGGATCCTTACTGTCCTGGATGTCCACACCAAAGTCATGGGATTGTGTCCAAACACTATTGACACATT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000077687.6 ENSMUST00000226455.2 |
||
| CDS-3UTR TCA 90 bp | ATATATCCAAGGATGACCTTGACCTCTGATACTCTTGCTTCCCATCTCCCAAGTTTCCTTGGAGGCTTCTaGGGACCAATTTTTGGTAAC | + |
|
Preference number: 4 (lower is better) Translates to: IYPRMTLTSDTLASHLPSFLGGF*GPIFGN Trigger: GTTACCAAAAATTGGTCCTCAGAAGCCTCCAAGGAA...ACTTGGGAGATGGGAAGCAAGAGTATCAGAGGTCAAGGTCATCCTTGGATATAT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000077687.6 ENSMUST00000226455.2 |
||
| CDS-3UTR GCA 90 bp | GATGATCAAGTACCATACAGAAAGCACATGCTAATGCTAAGCATTCAGTGTGTATTCAGAGCCTGTCCTTaGTTTCCAGGCCAGTGTCTC | + |
|
Preference number: 4 (lower is better) Translates to: DDQVPYRKHMLMLSIQCVFRACP*FPGQCL Trigger: GAGACACTGGCCTGGAAAGCAAGGACAGGCTCTGAA...TACACACTGAATGCTTAGCATTAGCATGTGCTTTCTGTATGGTACTTGATCATC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000226455.2 |
||
| CDS-3UTR CCA 90 bp | ATATATCCAAGGATGACCTTGACCTCTGATACTCTTGCTTCCCATCTCCCAAGTGCCATTGAGAAACCTTaGCTTTCAGGTCAGCACATA | + |
|
Preference number: 4 (lower is better) Translates to: IYPRMTLTSDTLASHLPSAIEKP*LSGQHI Trigger: TATGTGCTGACCTGAAAGCCAAGGTTTCTCAATGGC...ACTTGGGAGATGGGAAGCAAGAGTATCAGAGGTCAAGGTCATCCTTGGATATAT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000077687.6 ENSMUST00000226455.2 |
||
| CDS-3UTR CCA 90 bp | AAAAGAGTTAATGTGTCAATAGTGTTTGGACACAATCCCATGACTTTGGTGTGGCTAACTGGGTCAGACTaGACAGCAACAGCAACCTGC | + |
|
Preference number: 4 (lower is better) Translates to: KRVNVSIVFGHNPMTLVWLTGSD*TATATC Trigger: GCAGGTTGCTGTTGCTGTCCAGTCTGACCCAGTTAG...CCACACCAAAGTCATGGGATTGTGTCCAAACACTATTGACACATTAACTCTTTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000077687.6 ENSMUST00000226455.2 |
||
| CDS-3UTR TCA 90 bp | ATATATCCAAGGATGACCTTGACCTCTGATACTCTTGCTTCCCATCTCCCAAGTCCTTGGATTGTTTCTTaGCAAAGTCAACCTCTTCCA | + |
|
Preference number: 4 (lower is better) Translates to: IYPRMTLTSDTLASHLPSPWIVS*QSQPLP Trigger: TGGAAGAGGTTGACTTTGTCAAGAAACAATCCAAGG...ACTTGGGAGATGGGAAGCAAGAGTATCAGAGGTCAAGGTCATCCTTGGATATAT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000077687.6 ENSMUST00000226455.2 |
||
| CDS-3UTR GCA 90 bp | ACTCTCTACCTTTTCCTAAGACTTCTCCATTCTTTGATGAGACATTATAGTGCTTCCTGCCACCACACCTaGTTGTGTTGCTTGATCAGC | + |
|
Preference number: 4 (lower is better) Translates to: TLYLFLRLLHSLMRHYSASCHHT*LCCLIS Trigger: GCTGATCAAGCAACACAAGCAGGTGTGGTGGCAGGA...AGCACTATAATGTCTCATCAAAGAATGGAGAAGTCTTAGGAAAAGGTAGAGAGT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000077687.6 ENSMUST00000226455.2 |
||
| CDS-3UTR GCA 90 bp | ACTCTCTACCTTTTCCTAAGACTTCTCCATTCTTTGATGAGACATTATAGTGCTTTCAGAGCCTGTCCTTaGTTTCCAGGCCAGTGTCTC | + |
|
Preference number: 4 (lower is better) Translates to: TLYLFLRLLHSLMRHYSAFRACP*FPGQCL Trigger: GAGACACTGGCCTGGAAAGCAAGGACAGGCTCTGAA...AGCACTATAATGTCTCATCAAAGAATGGAGAAGTCTTAGGAAAAGGTAGAGAGT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000077687.6 ENSMUST00000226455.2 |
||
| CDS-3UTR CCA 90 bp | TACCTTTTCCTAAGACTTCTCCATTCTTTGATGAGACATTATAGTGCTGTAAAGGGAGCTTCTGCTCTGTaGAAGCAGACGCAGACCTTG | + |
|
Preference number: 4 (lower is better) Translates to: YLFLRLLHSLMRHYSAVKGASAL*KQTQTL Trigger: CAAGGTCTGCGTCTGCTTCCACAGAGCAGAAGCTCC...CTTTACAGCACTATAATGTCTCATCAAAGAATGGAGAAGTCTTAGGAAAAGGTA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000226455.2 |
||
| 3UTR CAA 72 bp | ATACAGTTGCTTTGTGCTCCTTTGGCTTTGGAGACATaGGATACTTTGGATACATCATGTAGCCTAGGTTGG | + |
|
Preference number: 4 (lower is better) Translates to: IQLLCAPLALET*DTLDTSCSLGW Trigger: CCAACCTAGGCTACATGATGTATCCAAAGTATCCAATGTCTCCAAAGCCAAAGGAGCACAAAGCAACTGTAT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000226455.2 |
||
| CDS-3UTR GCA 90 bp | AAAAGAGTTAATGTGTCAATAGTGTTTGGACACAATCCCATGACTTTGGTGTGGAGTACAGAGCTCTTCTaGCAAGGAGATTTCCGGGAT | + |
|
Preference number: 4 (lower is better) Translates to: KRVNVSIVFGHNPMTLVWSTELF*QGDFRD Trigger: ATCCCGGAAATCTCCTTGGCAGAAGAGCTCTGTACT...CCACACCAAAGTCATGGGATTGTGTCCAAACACTATTGACACATTAACTCTTTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000077687.6 ENSMUST00000226455.2 |
||
| CDS-3UTR GCA 90 bp | TTGCACACGATGATTTTTGTCACAGCAGTTTTCCATGGGTTTATGGTCAGGGTCATTTCTTGCCACTTCTaGTGTTTCATAGCCCAGTAT | + |
|
Preference number: 4 (lower is better) Translates to: LHTMIFVTAVFHGFMVRVISCHF*CFIAQY Trigger: ATACTGGGCTATGAAACAGCAGAAGTGGCAAGAAAT...GACCCTGACCATAAACCCATGGAAAACTGCTGTGACAAAAATCATCGTGTGCAA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000077687.6 ENSMUST00000226455.2 |
||
| CDS-3UTR GCA 90 bp | TCTCAGTTAAAAACAAAAACAGGTATTCCCGTGATAGTGACACTGTCTAATTTCACAGCAACAGCAACCTaGTTTCGTAGGGCTTCCAGC | + |
|
Preference number: 4 (lower is better) Translates to: SQLKTKTGIPVIVTLSNFTATAT*FRRASS Trigger: GCTGGAAGCCCTACGAAAGCAGGTTGCTGTTGCTGT...GAAATTAGACAGTGTCACTATCACGGGAATACCTGTTTTTGTTTTTAACTGAGA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000077687.6 ENSMUST00000226455.2 |
||
| CDS-3UTR CCA 90 bp | TACCATACAGTTGCTTTGTGCTCCTTTGGCTTTGGAGACATTGGATACTTTGGAGCATACTGTGTTTTATaGAGTCCAGCTTCTCGAAGT | + |
|
Preference number: 4 (lower is better) Translates to: YHTVALCSFGFGDIGYFGAYCVL*SPASRS Trigger: ACTTCGAGAAGCTGGACTCCATAAAACACAGTATGC...TCCAAAGTATCCAATGTCTCCAAAGCCAAAGGAGCACAAAGCAACTGTATGGTA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000226455.2 |
||
| CDS-3UTR CCA 90 bp | AAAAGAGTTAATGTGTCAATAGTGTTTGGACACAATCCCATGACTTTGGTGTGGTTCTGTGTCCTTCCTTaGAGGCTTCTGAGGACCAAT | + |
|
Preference number: 4 (lower is better) Translates to: KRVNVSIVFGHNPMTLVWFCVLP*RLLRTN Trigger: ATTGGTCCTCAGAAGCCTCCAAGGAAGGACACAGAA...CCACACCAAAGTCATGGGATTGTGTCCAAACACTATTGACACATTAACTCTTTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000077687.6 ENSMUST00000226455.2 |
||
| 3UTR CAA 72 bp | TGTTCTACCATACAGTTGCTTTGTGCTCCTTTGGCTTaGGAGACATTGGATACTTTGGATACATCATGTAGC | + |
|
Preference number: 4 (lower is better) Translates to: CSTIQLLCAPLA*ETLDTLDTSCS Trigger: GCTACATGATGTATCCAAAGTATCCAATGTCTCCAAAGCCAAAGGAGCACAAAGCAACTGTATGGTAGAACA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000226455.2 |
||
| CDS-3UTR TCA 90 bp | AAAAGAGTTAATGTGTCAATAGTGTTTGGACACAATCCCATGACTTTGGTGTGGCGCACACCACTCTTCTaGCAGCTCTTTCTCAAAATT | + |
|
Preference number: 4 (lower is better) Translates to: KRVNVSIVFGHNPMTLVWRTPLF*QLFLKI Trigger: AATTTTGAGAAAGAGCTGTCAGAAGAGTGGTGTGCG...CCACACCAAAGTCATGGGATTGTGTCCAAACACTATTGACACATTAACTCTTTT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000077687.6 ENSMUST00000226455.2 |
||
| CDS-3UTR GCA 90 bp | ACTCTCTACCTTTTCCTAAGACTTCTCCATTCTTTGATGAGACATTATAGTGCTAGTACAGAGCTCTTCTaGCAAGGAGATTTCCGGGAT | + |
|
Preference number: 4 (lower is better) Translates to: TLYLFLRLLHSLMRHYSASTELF*QGDFRD Trigger: ATCCCGGAAATCTCCTTGGCAGAAGAGCTCTGTACT...AGCACTATAATGTCTCATCAAAGAATGGAGAAGTCTTAGGAAAAGGTAGAGAGT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000077687.6 ENSMUST00000226455.2 |
||
| CDS-3UTR CCA 90 bp | GTTAATGTGTCAATAGTGTTTGGACACAATCCCATGACTTTGGTGTGGACATCCTCTTCTGCACTTAGTTaGAAGTTACTGCGTATGTCT | + |
|
Preference number: 4 (lower is better) Translates to: VNVSIVFGHNPMTLVWTSSSALS*KLLRMS Trigger: AGACATACGCAGTAACTTCCAACTAAGTGCAGAAGA...GGATGTCCACACCAAAGTCATGGGATTGTGTCCAAACACTATTGACACATTAAC 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000077687.6 ENSMUST00000226455.2 |
||
| CDS-3UTR CCA 90 bp | TGCTTTGTGCTCCTTTGGCTTTGGAGACATTGGATACTTTGGATACATCATGTACTACCAAATGATGCCTaGACTTGTGAGGGAAATATC | + |
|
Preference number: 4 (lower is better) Translates to: CFVLLWLWRHWILWIHHVLPNDA*TCEGNI Trigger: GATATTTCCCTCACAAGTCCAGGCATCATTTGGTAG...TACATGATGTATCCAAAGTATCCAATGTCTCCAAAGCCAAAGGAGCACAAAGCA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000226455.2 |
||
| CDS-3UTR TCA 90 bp | ACTCTCTACCTTTTCCTAAGACTTCTCCATTCTTTGATGAGACATTATAGTGCTCGCACACCACTCTTCTaGCAGCTCTTTCTCAAAATT | + |
|
Preference number: 4 (lower is better) Translates to: TLYLFLRLLHSLMRHYSARTPLF*QLFLKI Trigger: AATTTTGAGAAAGAGCTGTCAGAAGAGTGGTGTGCG...AGCACTATAATGTCTCATCAAAGAATGGAGAAGTCTTAGGAAAAGGTAGAGAGT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000077687.6 ENSMUST00000226455.2 |
||
| CDS-3UTR CCA 90 bp | TCTCAGTTAAAAACAAAAACAGGTATTCCCGTGATAGTGACACTGTCTAATTTCTTCTGTGTCCTTCCTTaGAGGCTTCTGAGGACCAAT | + |
|
Preference number: 4 (lower is better) Translates to: SQLKTKTGIPVIVTLSNFFCVLP*RLLRTN Trigger: ATTGGTCCTCAGAAGCCTCCAAGGAAGGACACAGAA...GAAATTAGACAGTGTCACTATCACGGGAATACCTGTTTTTGTTTTTAACTGAGA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000077687.6 ENSMUST00000226455.2 |
||
| CDS-3UTR CCA 90 bp | ACTCTCTACCTTTTCCTAAGACTTCTCCATTCTTTGATGAGACATTATAGTGCTTCTTCTGCACTTAGTTaGAAGTTACTGCGTATGTCT | + |
|
Preference number: 4 (lower is better) Translates to: TLYLFLRLLHSLMRHYSASSALS*KLLRMS Trigger: AGACATACGCAGTAACTTCCAACTAAGTGCAGAAGA...AGCACTATAATGTCTCATCAAAGAATGGAGAAGTCTTAGGAAAAGGTAGAGAGT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000077687.6 ENSMUST00000226455.2 |
||
| CDS-3UTR CCA 90 bp | TCTCAGTTAAAAACAAAAACAGGTATTCCCGTGATAGTGACACTGTCTAATTTCCTACCAAATGATGCCTaGACTTGTGAGGGAAATATC | + |
|
Preference number: 4 (lower is better) Translates to: SQLKTKTGIPVIVTLSNFLPNDA*TCEGNI Trigger: GATATTTCCCTCACAAGTCCAGGCATCATTTGGTAG...GAAATTAGACAGTGTCACTATCACGGGAATACCTGTTTTTGTTTTTAACTGAGA 38% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000077687.6 ENSMUST00000226455.2 |
||
| CDS-3UTR CCA 90 bp | TCTCAGTTAAAAACAAAAACAGGTATTCCCGTGATAGTGACACTGTCTAATTTCGCATACTGTGTTTTATaGAGTCCAGCTTCTCGAAGT | + |
|
Preference number: 4 (lower is better) Translates to: SQLKTKTGIPVIVTLSNFAYCVL*SPASRS Trigger: ACTTCGAGAAGCTGGACTCCATAAAACACAGTATGC...GAAATTAGACAGTGTCACTATCACGGGAATACCTGTTTTTGTTTTTAACTGAGA 38% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 2 transcripts: ENSMUST00000077687.6 ENSMUST00000226455.2 |
||
| CDS-3UTR TCA 90 bp | TACCTTTTCCTAAGACTTCTCCATTCTTTGATGAGACATTATAGTGCTGTAAAGTTCTCTTCTTCTGGCTaGAATTTCCATTTCCAGTCT | + |
|
Preference number: 4 (lower is better) Translates to: YLFLRLLHSLMRHYSAVKFSSSG*NFHFQS Trigger: AGACTGGAAATGGAAATTTCAGCCAGAAGAAGAGAA...CTTTACAGCACTATAATGTCTCATCAAAGAATGGAGAAGTCTTAGGAAAAGGTA 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000077687.6 ENSMUST00000226455.2 |
||
| CDS-3UTR GCA 90 bp | TCTCAGTTAAAAACAAAAACAGGTATTCCCGTGATAGTGACACTGTCTAATTTCATTTCTTGCCACTTCTaGTGTTTCATAGCCCAGTAT | + |
|
Preference number: 4 (lower is better) Translates to: SQLKTKTGIPVIVTLSNFISCHF*CFIAQY Trigger: ATACTGGGCTATGAAACAGCAGAAGTGGCAAGAAAT...GAAATTAGACAGTGTCACTATCACGGGAATACCTGTTTTTGTTTTTAACTGAGA 37% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000077687.6 ENSMUST00000226455.2 |
||
| CDS-3UTR GCA 90 bp | TCTCAGTTAAAAACAAAAACAGGTATTCCCGTGATAGTGACACTGTCTAATTTCTCGGAAATTATCTGTTaGTCGTTGTATGTAGTCAGT | + |
|
Preference number: 4 (lower is better) Translates to: SQLKTKTGIPVIVTLSNFSEIIC*SLYVVS Trigger: ACTGACTACATACAACGAGCAACAGATAATTTCCGA...GAAATTAGACAGTGTCACTATCACGGGAATACCTGTTTTTGTTTTTAACTGAGA 36% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000077687.6 ENSMUST00000226455.2 |
||
| CDS CCA 90 bp | TGGCTTTCAGGTCAGCACATAGTTCCTGTTGCCGTCTCCTGTCCTTaGCCAGAAGGCTCCCCATTTCATGGGCTGCACAGGCTTCGAGGA | + |
|
Preference number: 5 (lower is better) Translates to: WLSGQHIVPVAVSCP*PEGSPFHGLHRLRG Trigger: TCCTCGAAGCCTGTGCAGCCCATGAAATGGGGAGCCTTCTGGCCAAGGACAGGAGACGGCAACAGGAACTATGTGCTGACCTGAAAGCCA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000077687.6 ENSMUST00000226455.2 |
||
| CDS GCA 90 bp | TGCTCTTTCGCAGCCCTTGACGTCTCTATGGCTTTTTGGAGCTTCTaGTCTGTGGAAGCAGACGCAGACCTTGTGGCTTCGGTTAGGGCC | + |
|
Preference number: 5 (lower is better) Translates to: CSFAALDVSMAFWSF*SVEADADLVASVRA Trigger: GGCCCTAACCGAAGCCACAAGGTCTGCGTCTGCTTCCACAGAGCAGAAGCTCCAAAAAGCCATAGAGACGTCAAGGGCTGCGAAAGAGCA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000226455.2 |
||
| CDS CCA 90 bp | TCGCAGCCCTTGACGTCTCTATGGCTTTTTGGAGCTTCTGCTCTGTaGAAGCAGACGCAGACCTTGTGGCTTCGGTTAGGGCCCGTAACT | + |
|
Preference number: 5 (lower is better) Translates to: SQPLTSLWLFGASAL*KQTQTLWLRLGPVT Trigger: AGTTACGGGCCCTAACCGAAGCCACAAGGTCTGCGTCTGCTTCCACAGAGCAGAAGCTCCAAAAAGCCATAGAGACGTCAAGGGCTGCGA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000226455.2 |
||
| CDS CCA 90 bp | GCTTTCCAGGCCAGTGTCTCTGACATCATTCTAACTGGGTCAGACTaGACAGCAACAGCAACCTGCTTTCGTAGGGCTTCCAGCCGCCTT | + |
|
Preference number: 5 (lower is better) Translates to: AFQASVSDIILTGSD*TATATCFRRASSRL Trigger: AAGGCGGCTGGAAGCCCTACGAAAGCAGGTTGCTGTTGCTGTCCAGTCTGACCCAGTTAGAATGATGTCAGAGACACTGGCCTGGAAAGC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000077687.6 ENSMUST00000226455.2 |
||
| CDS-3UTR CAA 90 bp | GGATCCACAGGCTCAGCAGCATCCATATCGCGCTGTTTTGCACACGATGATTTTTGCCGTCTCCTGTCCTaGGCCAGAAGGCTCCCCATT | + |
|
Preference number: 5 (lower is better) Translates to: GSTGSAASISRCFAHDDFCRLLS*ARRLPI Trigger: AATGGGGAGCCTTCTGGCCAAGGACAGGAGACGGCA...AAAATCATCGTGTGCAAAACAGCGCGATATGGATGCTGCTGAGCCTGTGGATCC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000077687.6 ENSMUST00000226455.2 |
||
| CDS TCA 90 bp | TTGTTTCTTGACAAAGTCAACCTCTTCCAGAACCTCAGTTGCGTCTaGGCCCTCATGGCAGGGTGCACTCTGAGAAGTGGGGTACCATCT | + |
|
Preference number: 5 (lower is better) Translates to: LFLDKVNLFQNLSCV*ALMAGCTLRSGVPS Trigger: AGATGGTACCCCACTTCTCAGAGTGCACCCTGCCATGAGGGCTCAGACGCAACTGAGGTTCTGGAAGAGGTTGACTTTGTCAAGAAACAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000077687.6 ENSMUST00000226455.2 |
||
| CDS TCA 90 bp | TTCCTCACTTTCAGAGCCTGTCCTTGCTTTCCAGGCCAGTGTCTCTaGCATCATTCTAACTGGGTCAGACTGGACAGCAACAGCAACCTG | + |
|
Preference number: 5 (lower is better) Translates to: FLTFRACPCFPGQCL*HHSNWVRLDSNSNL Trigger: CAGGTTGCTGTTGCTGTCCAGTCTGACCCAGTTAGAATGATGTCAGAGACACTGGCCTGGAAAGCAAGGACAGGCTCTGAAAGTGAGGAA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000077687.6 ENSMUST00000226455.2 |
||
| CDS GCA 90 bp | TCTGACATCATTCTAACTGGGTCAGACTGGACAGCAACAGCAACCTaGTTTCGTAGGGCTTCCAGCCGCCTTTCTCTCTCTTCTTCTTCC | + |
|
Preference number: 5 (lower is better) Translates to: SDIILTGSDWTATAT*FRRASSRLSLSSSS Trigger: GGAAGAAGAAGAGAGAGAAAGGCGGCTGGAAGCCCTACGAAAGCAGGTTGCTGTTGCTGTCCAGTCTGACCCAGTTAGAATGATGTCAGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000077687.6 ENSMUST00000226455.2 |
||
| CDS CCA 90 bp | CCAGTCTTGATAGCTCTTCTTGTTGGGCTCGCCATTGAGAAACCTTaGCTTTCAGGTCAGCACATAGTTCCTGTTGCCGTCTCCTGTCCT | + |
|
Preference number: 5 (lower is better) Translates to: PVLIALLVGLAIEKP*LSGQHIVPVAVSCP Trigger: AGGACAGGAGACGGCAACAGGAACTATGTGCTGACCTGAAAGCCAAGGTTTCTCAATGGCGAGCCCAACAAGAAGAGCTATCAAGACTGG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000077687.6 ENSMUST00000226455.2 |
||
| CDS-3UTR CAA 90 bp | ATATATCCAAGGATGACCTTGACCTCTGATACTCTTGCTTCCCATCTCCCAAGTTGCCGTCTCCTGTCCTaGGCCAGAAGGCTCCCCATT | + |
|
Preference number: 5 (lower is better) Translates to: IYPRMTLTSDTLASHLPSCRLLS*ARRLPI Trigger: AATGGGGAGCCTTCTGGCCAAGGACAGGAGACGGCA...ACTTGGGAGATGGGAAGCAAGAGTATCAGAGGTCAAGGTCATCCTTGGATATAT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000077687.6 ENSMUST00000226455.2 |
||
| CDS GCA 90 bp | TCAGACTCCAATTTACATCTGATCCCCTTCAGCCTCTCCTGTTCCTaGCACCACACCTGCTTGTGTTGCTTGATCAGCATCTGCTCTTTC | + |
|
Preference number: 5 (lower is better) Translates to: SDSNLHLIPFSLSCS*HHTCLCCLISICSF Trigger: GAAAGAGCAGATGCTGATCAAGCAACACAAGCAGGTGTGGTGGCAGGAACAGGAGAGGCTGAAGGGGATCAGATGTAAATTGGAGTCTGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000226455.2 |
||
| CDS-3UTR CAA 90 bp | ATATATCCAAGGATGACCTTGACCTCTGATACTCTTGCTTCCCATCTCCCAAGTCTTCCAGAACCTCAGTaGCGTCTGAGCCCTCATGGC | + |
|
Preference number: 5 (lower is better) Translates to: IYPRMTLTSDTLASHLPSLPEPQ*RLSPHG Trigger: GCCATGAGGGCTCAGACGCAACTGAGGTTCTGGAAG...ACTTGGGAGATGGGAAGCAAGAGTATCAGAGGTCAAGGTCATCCTTGGATATAT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000077687.6 ENSMUST00000226455.2 |
||
| CDS-3UTR CAA 90 bp | GGATCCACAGGCTCAGCAGCATCCATATCGCGCTGTTTTGCACACGATGATTTTATTCTGTGTCCTTCCTaGGAGGCTTCTGAGGACCAA | + |
|
Preference number: 5 (lower is better) Translates to: GSTGSAASISRCFAHDDFILCPS*EASEDQ Trigger: TTGGTCCTCAGAAGCCTCCAAGGAAGGACACAGAAT...AAAATCATCGTGTGCAAAACAGCGCGATATGGATGCTGCTGAGCCTGTGGATCC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000077687.6 ENSMUST00000226455.2 |
||
| CDS TCA 90 bp | CCGGGAGCTCCTAGTTCCATCTTTCATATGGACTGCCAGGATATCTaGGCTGTCATTTCTCTGAATCATCATGAAGGGCCAGTCTCTTCT | + |
|
Preference number: 5 (lower is better) Translates to: PGAPSSIFHMDCQDI*AVISLNHHEGPVSS Trigger: AGAAGAGACTGGCCCTTCATGATGATTCAGAGAAATGACAGCTCAGATATCCTGGCAGTCCATATGAAAGATGGAACTAGGAGCTCCCGG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000226455.2 |
||
| CDS-3UTR CAA 90 bp | ATATATCCAAGGATGACCTTGACCTCTGATACTCTTGCTTCCCATCTCCCAAGTTTTCAGAGCCTGTCCTaGCTTTCCAGGCCAGTGTCT | + |
|
Preference number: 5 (lower is better) Translates to: IYPRMTLTSDTLASHLPSFQSLS*LSRPVS Trigger: AGACACTGGCCTGGAAAGCAAGGACAGGCTCTGAAA...ACTTGGGAGATGGGAAGCAAGAGTATCAGAGGTCAAGGTCATCCTTGGATATAT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000077687.6 ENSMUST00000226455.2 |
||
| CDS-3UTR CAA 90 bp | TTGCACACGATGATTTTTGTCACAGCAGTTTTCCATGGGTTTATGGTCAGGGTCTTTCAGAGCCTGTCCTaGCTTTCCAGGCCAGTGTCT | + |
|
Preference number: 5 (lower is better) Translates to: LHTMIFVTAVFHGFMVRVFQSLS*LSRPVS Trigger: AGACACTGGCCTGGAAAGCAAGGACAGGCTCTGAAA...GACCCTGACCATAAACCCATGGAAAACTGCTGTGACAAAAATCATCGTGTGCAA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000077687.6 ENSMUST00000226455.2 |
||
| CDS GCA 90 bp | TGTGAGGGAAATATCTTTGCAACATGTCCAAGTACAGAGCTCTTCTaGCAAGGAGATTTCCGGGATACTGGTCTAAGACAGCCTGGTAAG | + |
|
Preference number: 5 (lower is better) Translates to: CEGNIFATCPSTELF*QGDFRDTGLRQPGK Trigger: CTTACCAGGCTGTCTTAGACCAGTATCCCGGAAATCTCCTTGGCAGAAGAGCTCTGTACTTGGACATGTTGCAAAGATATTTCCCTCACA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000077687.6 ENSMUST00000226455.2 |
||
| CDS-3UTR CAA 90 bp | GATGATCAAGTACCATACAGAAAGCACATGCTAATGCTAAGCATTCAGTGTGTACTTCCAGAACCTCAGTaGCGTCTGAGCCCTCATGGC | + |
|
Preference number: 5 (lower is better) Translates to: DDQVPYRKHMLMLSIQCVLPEPQ*RLSPHG Trigger: GCCATGAGGGCTCAGACGCAACTGAGGTTCTGGAAG...TACACACTGAATGCTTAGCATTAGCATGTGCTTTCTGTATGGTACTTGATCATC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000226455.2 |
||
| CDS-3UTR CAA 90 bp | CTCAATTTTCCTCACAACCACAGTGTAGGATGTCTCCCTTTCTCAGAACAGCAGCTGCTCCTGCTCCAATaGTCTATCAGGATTCTTCTC | + |
|
Preference number: 5 (lower is better) Translates to: LNFPHNHSVGCLPFSEQQLLLLQ*SIRILL Trigger: GAGAAGAATCCTGATAGACAATTGGAGCAGGAGCAG...CTGCTGTTCTGAGAAAGGGAGACATCCTACACTGTGGTTGTGAGGAAAATTGAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000226455.2 |
||
| CDS-3UTR CAA 90 bp | TTGCACACGATGATTTTTGTCACAGCAGTTTTCCATGGGTTTATGGTCAGGGTCATTCTGTGTCCTTCCTaGGAGGCTTCTGAGGACCAA | + |
|
Preference number: 5 (lower is better) Translates to: LHTMIFVTAVFHGFMVRVILCPS*EASEDQ Trigger: TTGGTCCTCAGAAGCCTCCAAGGAAGGACACAGAAT...GACCCTGACCATAAACCCATGGAAAACTGCTGTGACAAAAATCATCGTGTGCAA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000077687.6 ENSMUST00000226455.2 |
||
| CDS-3UTR CAA 90 bp | GGATCCACAGGCTCAGCAGCATCCATATCGCGCTGTTTTGCACACGATGATTTTTCTCTTTTCCATTTCTaGCCACTTCTGCTGTTTCAT | + |
|
Preference number: 5 (lower is better) Translates to: GSTGSAASISRCFAHDDFSLFHF*PLLLFH Trigger: ATGAAACAGCAGAAGTGGCAAGAAATGGAAAAGAGA...AAAATCATCGTGTGCAAAACAGCGCGATATGGATGCTGCTGAGCCTGTGGATCC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000077687.6 ENSMUST00000226455.2 |
||
| CDS-3UTR CAA 90 bp | TGCTTTGTGCTCCTTTGGCTTTGGAGACATTGGATACTTTGGATACATCATGTACCACACCTGCTTGTGTaGCTTGATCAGCATCTGCTC | + |
|
Preference number: 5 (lower is better) Translates to: CFVLLWLWRHWILWIHHVPHLLV*LDQHLL Trigger: GAGCAGATGCTGATCAAGCAACACAAGCAGGTGTGG...TACATGATGTATCCAAAGTATCCAATGTCTCCAAAGCCAAAGGAGCACAAAGCA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000226455.2 |
||
| CDS-3UTR CAA 90 bp | GATGATCAAGTACCATACAGAAAGCACATGCTAATGCTAAGCATTCAGTGTGTATGCCACCACACCTGCTaGTGTTGCTTGATCAGCATC | + |
|
Preference number: 5 (lower is better) Translates to: DDQVPYRKHMLMLSIQCVCHHTC*CCLISI Trigger: GATGCTGATCAAGCAACACAAGCAGGTGTGGTGGCA...TACACACTGAATGCTTAGCATTAGCATGTGCTTTCTGTATGGTACTTGATCATC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000226455.2 |
||
| CDS TCA 90 bp | TCCATGGGCTGTTCGCTGAGCAAGTTAGGTTTTTCTTCTGAAGAGTaGTCTAGTAACTTCACACTCAAGTCCAAAAGGTCTTCCTCTAAG | + |
|
Preference number: 5 (lower is better) Translates to: SMGCSLSKLGFSSEE*SSNFTLKSKRSSSK Trigger: CTTAGAGGAAGACCTTTTGGACTTGAGTGTGAAGTTACTAGATCACTCTTCAGAAGAAAAACCTAACTTGCTCAGCGAACAGCCCATGGA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000077687.6 ENSMUST00000226455.2 |
||
| CDS TCA 90 bp | ATTATCTGTTGCTCGTTGTATGTAGTCAGTGTGAAGAGCGGCTTTTaGAGGATGAATTCTTCCTCACTTTCAGAGCCTGTCCTTGCTTTC | + |
|
Preference number: 5 (lower is better) Translates to: IICCSLYVVSVKSGF*RMNSSSLSEPVLAF Trigger: GAAAGCAAGGACAGGCTCTGAAAGTGAGGAAGAATTCATCCTTCAAAAGCCGCTCTTCACACTGACTACATACAACGAGCAACAGATAAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000077687.6 ENSMUST00000226455.2 |
||
| CDS-3UTR CAA 90 bp | GTTAATGTGTCAATAGTGTTTGGACACAATCCCATGACTTTGGTGTGGACATCCGCCTTGGATTGTTTCTaGACAAAGTCAACCTCTTCC | + |
|
Preference number: 5 (lower is better) Translates to: VNVSIVFGHNPMTLVWTSALDCF*TKSTSS Trigger: GGAAGAGGTTGACTTTGTCAAGAAACAATCCAAGGC...GGATGTCCACACCAAAGTCATGGGATTGTGTCCAAACACTATTGACACATTAAC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000077687.6 ENSMUST00000226455.2 |
||
| CDS-3UTR CAA 90 bp | TACCATACAGTTGCTTTGTGCTCCTTTGGCTTTGGAGACATTGGATACTTTGGAGCCTTGGATTGTTTCTaGACAAAGTCAACCTCTTCC | + |
|
Preference number: 5 (lower is better) Translates to: YHTVALCSFGFGDIGYFGALDCF*TKSTSS Trigger: GGAAGAGGTTGACTTTGTCAAGAAACAATCCAAGGC...TCCAAAGTATCCAATGTCTCCAAAGCCAAAGGAGCACAAAGCAACTGTATGGTA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000226455.2 |
||
| CDS-3UTR CAA 90 bp | ATATATCCAAGGATGACCTTGACCTCTGATACTCTTGCTTCCCATCTCCCAAGTTTTCCATTTCCAGTCTaGATAGCTCTTCTTGTTGGG | + |
|
Preference number: 5 (lower is better) Translates to: IYPRMTLTSDTLASHLPSFPFPV*IALLVG Trigger: CCCAACAAGAAGAGCTATCAAGACTGGAAATGGAAA...ACTTGGGAGATGGGAAGCAAGAGTATCAGAGGTCAAGGTCATCCTTGGATATAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000077687.6 ENSMUST00000226455.2 |
||
| CDS-3UTR CAA 90 bp | ATATATCCAAGGATGACCTTGACCTCTGATACTCTTGCTTCCCATCTCCCAAGTTCTGAGGACCAATTTTaGGTAACATCTCTTTGGCAT | + |
|
Preference number: 5 (lower is better) Translates to: IYPRMTLTSDTLASHLPSSEDQF*VTSLWH Trigger: ATGCCAAAGAGATGTTACCAAAAATTGGTCCTCAGA...ACTTGGGAGATGGGAAGCAAGAGTATCAGAGGTCAAGGTCATCCTTGGATATAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000077687.6 ENSMUST00000226455.2 |
||
| CDS GCA 90 bp | CAGCCTGGTAAGTCCAGTGCTCTTCTGCACTTAGTTGGAAGTTACTaGGTATGTCTTCTAATTGCAGATCAAAATCTTCAAGTTTCTCTT | + |
|
Preference number: 5 (lower is better) Translates to: QPGKSSALLHLVGSY*VCLLIADQNLQVSL Trigger: AAGAGAAACTTGAAGATTTTGATCTGCAATTAGAAGACATACGCAGTAACTTCCAACTAAGTGCAGAAGAGCACTGGACTTACCAGGCTG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000077687.6 ENSMUST00000226455.2 |
||
| CDS-3UTR CAA 90 bp | TCTCAGTTAAAAACAAAAACAGGTATTCCCGTGATAGTGACACTGTCTAATTTCCGTCTCTATGGCTTTTaGGAGCTTCTGCTCTGTGGA | + |
|
Preference number: 5 (lower is better) Translates to: SQLKTKTGIPVIVTLSNFRLYGF*ELLLCG Trigger: TCCACAGAGCAGAAGCTCCAAAAAGCCATAGAGACG...GAAATTAGACAGTGTCACTATCACGGGAATACCTGTTTTTGTTTTTAACTGAGA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000226455.2 |
||
| CDS-3UTR CAA 90 bp | TCTCAGTTAAAAACAAAAACAGGTATTCCCGTGATAGTGACACTGTCTAATTTCGCTCTTTCGCAGCCCTaGACGTCTCTATGGCTTTTT | + |
|
Preference number: 5 (lower is better) Translates to: SQLKTKTGIPVIVTLSNFALSQP*TSLWLF Trigger: AAAAAGCCATAGAGACGTCAAGGGCTGCGAAAGAGC...GAAATTAGACAGTGTCACTATCACGGGAATACCTGTTTTTGTTTTTAACTGAGA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000226455.2 |
||
| CDS-3UTR CAA 90 bp | TACCTTTTCCTAAGACTTCTCCATTCTTTGATGAGACATTATAGTGCTGTAAAGCTGCTCCTGCTCCAATaGTCTATCAGGATTCTTCTC | + |
|
Preference number: 5 (lower is better) Translates to: YLFLRLLHSLMRHYSAVKLLLLQ*SIRILL Trigger: GAGAAGAATCCTGATAGACAATTGGAGCAGGAGCAG...CTTTACAGCACTATAATGTCTCATCAAAGAATGGAGAAGTCTTAGGAAAAGGTA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000077687.6 ENSMUST00000226455.2 |
||
| CDS-3UTR CAA 90 bp | GATGATCAAGTACCATACAGAAAGCACATGCTAATGCTAAGCATTCAGTGTGTATTTCCATTTCCAGTCTaGATAGCTCTTCTTGTTGGG | + |
|
Preference number: 5 (lower is better) Translates to: DDQVPYRKHMLMLSIQCVFPFPV*IALLVG Trigger: CCCAACAAGAAGAGCTATCAAGACTGGAAATGGAAA...TACACACTGAATGCTTAGCATTAGCATGTGCTTTCTGTATGGTACTTGATCATC 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000226455.2 |
||
| CDS CCA 90 bp | TCTTTTTCCACAATTTCTCTTTCTCTTCTTCCCTTTCTCTTCTTCTaGCTGAAATTTCCATTTCCAGTCTTGATAGCTCTTCTTGTTGGG | + |
|
Preference number: 5 (lower is better) Translates to: SFSTISLSLLPFLFF*LKFPFPVLIALLVG Trigger: CCCAACAAGAAGAGCTATCAAGACTGGAAATGGAAATTTCAGCCAGAAGAAGAGAAAGGGAAGAAGAGAAAGAGAAATTGTGGAAAAAGA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000077687.6 ENSMUST00000226455.2 |
||
| CDS-3UTR CAA 90 bp | TCTCAGTTAAAAACAAAAACAGGTATTCCCGTGATAGTGACACTGTCTAATTTCGTGAGGGAAATATCTTaGCAACATGTCCAAGTACAG | + |
|
Preference number: 5 (lower is better) Translates to: SQLKTKTGIPVIVTLSNFVREIS*QHVQVQ Trigger: CTGTACTTGGACATGTTGCAAAGATATTTCCCTCAC...GAAATTAGACAGTGTCACTATCACGGGAATACCTGTTTTTGTTTTTAACTGAGA 38% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000077687.6 ENSMUST00000226455.2 |
||
| CDS-3UTR CAA 90 bp | TCTCAGTTAAAAACAAAAACAGGTATTCCCGTGATAGTGACACTGTCTAATTTCTCTCTTTTCCATTTCTaGCCACTTCTGCTGTTTCAT | + |
|
Preference number: 5 (lower is better) Translates to: SQLKTKTGIPVIVTLSNFSLFHF*PLLLFH Trigger: ATGAAACAGCAGAAGTGGCAAGAAATGGAAAAGAGA...GAAATTAGACAGTGTCACTATCACGGGAATACCTGTTTTTGTTTTTAACTGAGA 37% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 2 transcripts: ENSMUST00000077687.6 ENSMUST00000226455.2 |
||
| CDS-3UTR CAA 90 bp | TCTCAGTTAAAAACAAAAACAGGTATTCCCGTGATAGTGACACTGTCTAATTTCTCTGAGGACCAATTTTaGGTAACATCTCTTTGGCAT | + |
|
Preference number: 5 (lower is better) Translates to: SQLKTKTGIPVIVTLSNFSEDQF*VTSLWH Trigger: ATGCCAAAGAGATGTTACCAAAAATTGGTCCTCAGA...GAAATTAGACAGTGTCACTATCACGGGAATACCTGTTTTTGTTTTTAACTGAGA 37% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 2 transcripts: ENSMUST00000077687.6 ENSMUST00000226455.2 |
||
| CDS TCA 90 bp | CTGCGTATGTCTTCTAATTGCAGATCAAAATCTTCAAGTTTCTCTTaGTATCTCTCTGTAAAGTTACAGAACTCGTTAAGGATTGACGAT | + |
|
Preference number: 5 (lower is better) Translates to: LRMSSNCRSKSSSFS*YLSVKLQNSLRIDD Trigger: ATCGTCAATCCTTAACGAGTTCTGTAACTTTACAGAGAGATATCAAGAGAAACTTGAAGATTTTGATCTGCAATTAGAAGACATACGCAG 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000077687.6 ENSMUST00000226455.2 |
||
| CDS CCA 72 bp | CGTCTCCTGTCCTTGGCCAGAAGGCTCCCCATTTCATaGGCTGCACAGGCTTCGAGGAGAGTCAGCATGGCT | + |
|
Preference number: 6 (lower is better) Translates to: RLLSLARRLPIS*AAQASRRVSMA Trigger: AGCCATGCTGACTCTCCTCGAAGCCTGTGCAGCCCATGAAATGGGGAGCCTTCTGGCCAAGGACAGGAGACG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000077687.6 ENSMUST00000226455.2 |
||
| CDS GCA 72 bp | CCTGTCCTTGGCCAGAAGGCTCCCCATTTCATGGGCTaGACAGGCTTCGAGGAGAGTCAGCATGGCTTTCTG | + |
|
Preference number: 6 (lower is better) Translates to: PVLGQKAPHFMG*TGFEESQHGFL Trigger: CAGAAAGCCATGCTGACTCTCCTCGAAGCCTGTGCAGCCCATGAAATGGGGAGCCTTCTGGCCAAGGACAGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000077687.6 ENSMUST00000226455.2 |
||
| CDS CCA 72 bp | GGTCAGCACATAGTTCCTGTTGCCGTCTCCTGTCCTTaGCCAGAAGGCTCCCCATTTCATGGGCTGCACAGG | + |
|
Preference number: 6 (lower is better) Translates to: GQHIVPVAVSCP*PEGSPFHGLHR Trigger: CCTGTGCAGCCCATGAAATGGGGAGCCTTCTGGCCAAGGACAGGAGACGGCAACAGGAACTATGTGCTGACC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000077687.6 ENSMUST00000226455.2 |
||
| CDS CCA 72 bp | GGAGCTTCTGCTCTGTGGAAGCAGACGCAGACCTTGTaGCTTCGGTTAGGGCCCGTAACTGCTGGTAGTCCA | + |
|
Preference number: 6 (lower is better) Translates to: GASALWKQTQTL*LRLGPVTAGSP Trigger: TGGACTACCAGCAGTTACGGGCCCTAACCGAAGCCACAAGGTCTGCGTCTGCTTCCACAGAGCAGAAGCTCC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000226455.2 |
||
| CDS CAA 90 bp | TTGGCTTTCAGGTCAGCACATAGTTCCTGTTGCCGTCTCCTGTCCTaGGCCAGAAGGCTCCCCATTTCATGGGCTGCACAGGCTTCGAGG | + |
|
Preference number: 6 (lower is better) Translates to: LAFRSAHSSCCRLLS*ARRLPISWAAQASR Trigger: CCTCGAAGCCTGTGCAGCCCATGAAATGGGGAGCCTTCTGGCCAAGGACAGGAGACGGCAACAGGAACTATGTGCTGACCTGAAAGCCAA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000077687.6 ENSMUST00000226455.2 |
||
| CDS CAA 72 bp | AGGTCAGCACATAGTTCCTGTTGCCGTCTCCTGTCCTaGGCCAGAAGGCTCCCCATTTCATGGGCTGCACAG | + |
|
Preference number: 6 (lower is better) Translates to: RSAHSSCCRLLS*ARRLPISWAAQ Trigger: CTGTGCAGCCCATGAAATGGGGAGCCTTCTGGCCAAGGACAGGAGACGGCAACAGGAACTATGTGCTGACCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000077687.6 ENSMUST00000226455.2 |
||
| CDS CAA 90 bp | CATCTGATCCCCTTCAGCCTCTCCTGTTCCTGCCACCACACCTGCTaGTGTTGCTTGATCAGCATCTGCTCTTTCGCAGCCCTTGACGTC | + |
|
Preference number: 6 (lower is better) Translates to: HLIPFSLSCSCHHTC*CCLISICSFAALDV Trigger: GACGTCAAGGGCTGCGAAAGAGCAGATGCTGATCAAGCAACACAAGCAGGTGTGGTGGCAGGAACAGGAGAGGCTGAAGGGGATCAGATG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000226455.2 |
||
| CDS TCA 72 bp | GACAAAGTCAACCTCTTCCAGAACCTCAGTTGCGTCTaGGCCCTCATGGCAGGGTGCACTCTGAGAAGTGGG | + |
|
Preference number: 6 (lower is better) Translates to: DKVNLFQNLSCV*ALMAGCTLRSG Trigger: CCCACTTCTCAGAGTGCACCCTGCCATGAGGGCTCAGACGCAACTGAGGTTCTGGAAGAGGTTGACTTTGTC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000077687.6 ENSMUST00000226455.2 |
||
| CDS GCA 72 bp | GCAGCCCTTGACGTCTCTATGGCTTTTTGGAGCTTCTaGTCTGTGGAAGCAGACGCAGACCTTGTGGCTTCG | + |
|
Preference number: 6 (lower is better) Translates to: AALDVSMAFWSF*SVEADADLVAS Trigger: CGAAGCCACAAGGTCTGCGTCTGCTTCCACAGAGCAGAAGCTCCAAAAAGCCATAGAGACGTCAAGGGCTGC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000226455.2 |
||
| CDS TCA 72 bp | GTGGGGTACCATCTCTTCAGGCCCGTTCTCAGCTGCTaGATAGGATCAATGACAGCTGTAAGGTACGCACAC | + |
|
Preference number: 6 (lower is better) Translates to: VGYHLFRPVLSC*IGSMTAVRYAH Trigger: GTGTGCGTACCTTACAGCTGTCATTGATCCTATTCAGCAGCTGAGAACGGGCCTGAAGAGATGGTACCCCAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000077687.6 ENSMUST00000226455.2 |
||
| CDS GCA 72 bp | ATTCTAACTGGGTCAGACTGGACAGCAACAGCAACCTaGTTTCGTAGGGCTTCCAGCCGCCTTTCTCTCTCT | + |
|
Preference number: 6 (lower is better) Translates to: ILTGSDWTATAT*FRRASSRLSLS Trigger: AGAGAGAGAAAGGCGGCTGGAAGCCCTACGAAAGCAGGTTGCTGTTGCTGTCCAGTCTGACCCAGTTAGAAT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000077687.6 ENSMUST00000226455.2 |
||
| CDS CCA 72 bp | GCCAGTGTCTCTGACATCATTCTAACTGGGTCAGACTaGACAGCAACAGCAACCTGCTTTCGTAGGGCTTCC | + |
|
Preference number: 6 (lower is better) Translates to: ASVSDIILTGSD*TATATCFRRAS Trigger: GGAAGCCCTACGAAAGCAGGTTGCTGTTGCTGTCCAGTCTGACCCAGTTAGAATGATGTCAGAGACACTGGC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000077687.6 ENSMUST00000226455.2 |
||
| CDS CCA 72 bp | TTGACGTCTCTATGGCTTTTTGGAGCTTCTGCTCTGTaGAAGCAGACGCAGACCTTGTGGCTTCGGTTAGGG | + |
|
Preference number: 6 (lower is better) Translates to: LTSLWLFGASAL*KQTQTLWLRLG Trigger: CCCTAACCGAAGCCACAAGGTCTGCGTCTGCTTCCACAGAGCAGAAGCTCCAAAAAGCCATAGAGACGTCAA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000226455.2 |
||
| CDS CCA 72 bp | TGCTCTTTCGCAGCCCTTGACGTCTCTATGGCTTTTTaGAGCTTCTGCTCTGTGGAAGCAGACGCAGACCTT | + |
|
Preference number: 6 (lower is better) Translates to: CSFAALDVSMAF*SFCSVEADADL Trigger: AAGGTCTGCGTCTGCTTCCACAGAGCAGAAGCTCCAAAAAGCCATAGAGACGTCAAGGGCTGCGAAAGAGCA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000226455.2 |
||
| CDS CCA 72 bp | TCAGCATCTGCTCTTTCGCAGCCCTTGACGTCTCTATaGCTTTTTGGAGCTTCTGCTCTGTGGAAGCAGACG | + |
|
Preference number: 6 (lower is better) Translates to: SASALSQPLTSL*LFGASALWKQT Trigger: CGTCTGCTTCCACAGAGCAGAAGCTCCAAAAAGCCATAGAGACGTCAAGGGCTGCGAAAGAGCAGATGCTGA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000226455.2 |
||
| CDS TCA 72 bp | TTCAGAGCCTGTCCTTGCTTTCCAGGCCAGTGTCTCTaGCATCATTCTAACTGGGTCAGACTGGACAGCAAC | + |
|
Preference number: 6 (lower is better) Translates to: FRACPCFPGQCL*HHSNWVRLDSN Trigger: GTTGCTGTCCAGTCTGACCCAGTTAGAATGATGTCAGAGACACTGGCCTGGAAAGCAAGGACAGGCTCTGAA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000077687.6 ENSMUST00000226455.2 |
||
| CDS GCA 72 bp | TGCCACCACACCTGCTTGTGTTGCTTGATCAGCATCTaGTCTTTCGCAGCCCTTGACGTCTCTATGGCTTTT | + |
|
Preference number: 6 (lower is better) Translates to: CHHTCLCCLISI*SFAALDVSMAF Trigger: AAAAGCCATAGAGACGTCAAGGGCTGCGAAAGAGCAGATGCTGATCAAGCAACACAAGCAGGTGTGGTGGCA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000226455.2 |
||
| CDS CCA 72 bp | ATAGCTCTTCTTGTTGGGCTCGCCATTGAGAAACCTTaGCTTTCAGGTCAGCACATAGTTCCTGTTGCCGTC | + |
|
Preference number: 6 (lower is better) Translates to: IALLVGLAIEKP*LSGQHIVPVAV Trigger: GACGGCAACAGGAACTATGTGCTGACCTGAAAGCCAAGGTTTCTCAATGGCGAGCCCAACAAGAAGAGCTAT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000077687.6 ENSMUST00000226455.2 |
||
| CDS TCA 72 bp | TGCTCGTTGTATGTAGTCAGTGTGAAGAGCGGCTTTTaGAGGATGAATTCTTCCTCACTTTCAGAGCCTGTC | + |
|
Preference number: 6 (lower is better) Translates to: CSLYVVSVKSGF*RMNSSSLSEPV Trigger: GACAGGCTCTGAAAGTGAGGAAGAATTCATCCTTCAAAAGCCGCTCTTCACACTGACTACATACAACGAGCA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000077687.6 ENSMUST00000226455.2 |
||
| CDS TCA 72 bp | CCTAGTTCCATCTTTCATATGGACTGCCAGGATATCTaGGCTGTCATTTCTCTGAATCATCATGAAGGGCCA | + |
|
Preference number: 6 (lower is better) Translates to: PSSIFHMDCQDI*AVISLNHHEGP Trigger: TGGCCCTTCATGATGATTCAGAGAAATGACAGCTCAGATATCCTGGCAGTCCATATGAAAGATGGAACTAGG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000226455.2 |
||
| CDS GCA 72 bp | AATATCTTTGCAACATGTCCAAGTACAGAGCTCTTCTaGCAAGGAGATTTCCGGGATACTGGTCTAAGACAG | + |
|
Preference number: 6 (lower is better) Translates to: NIFATCPSTELF*QGDFRDTGLRQ Trigger: CTGTCTTAGACCAGTATCCCGGAAATCTCCTTGGCAGAAGAGCTCTGTACTTGGACATGTTGCAAAGATATT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000077687.6 ENSMUST00000226455.2 |
||
| CDS CAA 72 bp | TACCAAATGATGCCTGGACTTGTGAGGGAAATATCTTaGCAACATGTCCAAGTACAGAGCTCTTCTGCCAAG | + |
|
Preference number: 6 (lower is better) Translates to: YQMMPGLVREIS*QHVQVQSSSAK Trigger: CTTGGCAGAAGAGCTCTGTACTTGGACATGTTGCAAAGATATTTCCCTCACAAGTCCAGGCATCATTTGGTA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000077687.6 ENSMUST00000226455.2 |
||
| CDS CAA 72 bp | GCTTTCTGTATAAAGTCTTTCCTGCTCCTGCTCCAATaGTCTATCAGGATTCTTCTCTGCTCTCTAGCAAAG | + |
|
Preference number: 6 (lower is better) Translates to: AFCIKSFLLLLQ*SIRILLCSLAK Trigger: CTTTGCTAGAGAGCAGAGAAGAATCCTGATAGACAATTGGAGCAGGAGCAGGAAAGACTTTATACAGAAAGC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000077687.6 ENSMUST00000226455.2 |
||
| CDS CAA 90 bp | AATTATCTGTTGCTCGTTGTATGTAGTCAGTGTGAAGAGCGGCTTTaGAAGGATGAATTCTTCCTCACTTTCAGAGCCTGTCCTTGCTTT | + |
|
Preference number: 6 (lower is better) Translates to: NYLLLVVCSQCEERL*KDEFFLTFRACPCF Trigger: AAAGCAAGGACAGGCTCTGAAAGTGAGGAAGAATTCATCCTTCAAAAGCCGCTCTTCACACTGACTACATACAACGAGCAACAGATAATT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000077687.6 ENSMUST00000226455.2 |
||
| CDS TCA 72 bp | ATATCTCTCTGTAAAGTTACAGAACTCGTTAAGGATTaGCGATTTCAGATCTGGGTATGGGCAGTCCAACGT | + |
|
Preference number: 6 (lower is better) Translates to: ISLCKVTELVKD*RFQIWVWAVQR Trigger: ACGTTGGACTGCCCATACCCAGATCTGAAATCGTCAATCCTTAACGAGTTCTGTAACTTTACAGAGAGATAT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000077687.6 ENSMUST00000226455.2 |
||
| CDS TCA 72 bp | TGTTCGCTGAGCAAGTTAGGTTTTTCTTCTGAAGAGTaGTCTAGTAACTTCACACTCAAGTCCAAAAGGTCT | + |
|
Preference number: 6 (lower is better) Translates to: CSLSKLGFSSEE*SSNFTLKSKRS Trigger: AGACCTTTTGGACTTGAGTGTGAAGTTACTAGATCACTCTTCAGAAGAAAAACCTAACTTGCTCAGCGAACA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000077687.6 ENSMUST00000226455.2 |
||
| CDS TCA 72 bp | TTGTCTATCAGGATTCTTCTCTGCTCTCTAGCAAAGTaGTACTGGTCACAGTATTTCTCGTGTTCTACCAAA | + |
|
Preference number: 6 (lower is better) Translates to: LSIRILLCSLAK*YWSQYFSCSTK Trigger: TTTGGTAGAACACGAGAAATACTGTGACCAGTATCACTTTGCTAGAGAGCAGAGAAGAATCCTGATAGACAA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000077687.6 ENSMUST00000226455.2 |
||
| CDS CCA 72 bp | ATTTTTGGTAACATCTCTTTGGCATACTGTGTTTTATaGAGTCCAGCTTCTCGAAGTGCTAACTCAAATCGA | + |
|
Preference number: 6 (lower is better) Translates to: IFGNISLAYCVL*SPASRSANSNR Trigger: TCGATTTGAGTTAGCACTTCGAGAAGCTGGACTCCATAAAACACAGTATGCCAAAGAGATGTTACCAAAAAT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000077687.6 ENSMUST00000226455.2 |
||
| CDS CAA 90 bp | AAATTCATAAGCTCACAAAAACATTCACTCCCAATGCTCTCCTCATaGAGACAAGATCTTATTTCAGACTCCAATTTACATCTGATCCCC | + |
|
Preference number: 6 (lower is better) Translates to: KFISSQKHSLPMLSS*RQDLISDSNLHLIP Trigger: GGGGATCAGATGTAAATTGGAGTCTGAAATAAGATCTTGTCTCAATGAGGAGAGCATTGGGAGTGAATGTTTTTGTGAGCTTATGAATTT 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000077687.6 ENSMUST00000226455.2 |
||
| CDS CAA 72 bp | AGCTCACAAAAACATTCACTCCCAATGCTCTCCTCATaGAGACAAGATCTTATTTCAGACTCCAATTTACAT | + |
|
Preference number: 6 (lower is better) Translates to: SSQKHSLPMLSS*RQDLISDSNLH Trigger: ATGTAAATTGGAGTCTGAAATAAGATCTTGTCTCAATGAGGAGAGCATTGGGAGTGAATGTTTTTGTGAGCT 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000077687.6 ENSMUST00000226455.2 |
||