Pregenerated sensors for CCDC146 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000064280Ensembl transcript IDs: ENSMUST00000030552.7, ENSMUST00000115245.8
Found 175 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | TGTAGTCTATGTCCCATTCAGTGTCACTTACCAGGTAATAGTTGGTaGATGTACAAGGAAGCCACTGCTTTGGAAACAACCCATTGTTGT | + |
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Preference number: 1 (lower is better) Translates to: CSLCPIQCHLPGNSW*MYKEATALETTHCC Trigger: ACAACAATGGGTTGTTTCCAAAGCAGTGGCTTCCTTGTACATTCACCAACTATTACCTGGTAAGTGACACTGAATGGGACATAGACTACA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000115245.8 |
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| 3UTR CAA 90 bp | GTGAATGTACAAGGAAGCCACTGCTTTGGAAACAACCCATTGTTGTaGACCGTGCCTGGCTCATCAGCAGCCCTAGAACCCTGGTGCTCA | + |
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Preference number: 2 (lower is better) Translates to: VNVQGSHCFGNNPLL*TVPGSSAALEPWCS Trigger: TGAGCACCAGGGTTCTAGGGCTGCTGATGAGCCAGGCACGGTCAACAACAATGGGTTGTTTCCAAAGCAGTGGCTTCCTTGTACATTCAC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000115245.8 |
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| 3UTR CAA 90 bp | TTGGTGAATGTACAAGGAAGCCACTGCTTTGGAAACAACCCATTGTaGTTGACCGTGCCTGGCTCATCAGCAGCCCTAGAACCCTGGTGC | + |
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Preference number: 2 (lower is better) Translates to: LVNVQGSHCFGNNPL*LTVPGSSAALEPWC Trigger: GCACCAGGGTTCTAGGGCTGCTGATGAGCCAGGCACGGTCAACAACAATGGGTTGTTTCCAAAGCAGTGGCTTCCTTGTACATTCACCAA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000115245.8 |
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| 3UTR GCA 72 bp | ACCGTGCCTGGCTCATCAGCAGCCCTAGAACCCTGGTaGTCATTCTCCATAGAAGGTCTGAGGCTTGGCTCA | + |
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Preference number: 3 (lower is better) Translates to: TVPGSSAALEPW*SFSIEGLRLGS Trigger: TGAGCCAAGCCTCAGACCTTCTATGGAGAATGAGCACCAGGGTTCTAGGGCTGCTGATGAGCCAGGCACGGT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000115245.8 |
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| 3UTR CCA 72 bp | TTGACCGTGCCTGGCTCATCAGCAGCCCTAGAACCCTaGTGCTCATTCTCCATAGAAGGTCTGAGGCTTGGC | + |
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Preference number: 3 (lower is better) Translates to: LTVPGSSAALEP*CSFSIEGLRLG Trigger: GCCAAGCCTCAGACCTTCTATGGAGAATGAGCACCAGGGTTCTAGGGCTGCTGATGAGCCAGGCACGGTCAA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000115245.8 |
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| 3UTR CCA 72 bp | GTAATAGTTGGTGAATGTACAAGGAAGCCACTGCTTTaGAAACAACCCATTGTTGTTGACCGTGCCTGGCTC | + |
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Preference number: 3 (lower is better) Translates to: VIVGECTRKPLL*KQPIVVDRAWL Trigger: GAGCCAGGCACGGTCAACAACAATGGGTTGTTTCCAAAGCAGTGGCTTCCTTGTACATTCACCAACTATTAC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000115245.8 |
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| CDS-3UTR GCA 90 bp | CCCATTGTTGTTGACCGTGCCTGGCTCATCAGCAGCCCTAGAACCCTGGTGCTCTGGCCAGCCTGTCCATaGTGGTCAGCTGGGCCTCCT | + |
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Preference number: 4 (lower is better) Translates to: PIVVDRAWLISSPRTLVLWPACP*WSAGPP Trigger: AGGAGGCCCAGCTGACCAGCATGGACAGGCTGGCCA...GAGCACCAGGGTTCTAGGGCTGCTGATGAGCCAGGCACGGTCAACAACAATGGG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000115245.8 |
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| CDS-3UTR GCA 90 bp | CCCATTGTTGTTGACCGTGCCTGGCTCATCAGCAGCCCTAGAACCCTGGTGCTCTGCAGACAGACCTGCTaGTGCTGGATCTGCTCCGTG | + |
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Preference number: 4 (lower is better) Translates to: PIVVDRAWLISSPRTLVLCRQTC*CWICSV Trigger: CACGGAGCAGATCCAGCAGCAGCAGGTCTGTCTGCA...GAGCACCAGGGTTCTAGGGCTGCTGATGAGCCAGGCACGGTCAACAACAATGGG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000115245.8 |
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| CDS-3UTR GCA 90 bp | TCCATAGAAGGTCTGAGGCTTGGCTCAGGCCCTCTCTGTGAGAGGACTGCTGGGTGCTGCAGACAGACCTaGTGCTGCTGGATCTGCTCC | + |
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Preference number: 4 (lower is better) Translates to: SIEGLRLGSGPLCERTAGCCRQT*CCWICS Trigger: GGAGCAGATCCAGCAGCAGCAGGTCTGTCTGCAGCA...CCCAGCAGTCCTCTCACAGAGAGGGCCTGAGCCAAGCCTCAGACCTTCTATGGA 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000115245.8 |
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| CDS-3UTR GCA 90 bp | CCCATTGTTGTTGACCGTGCCTGGCTCATCAGCAGCCCTAGAACCCTGGTGCTCTGCACCTCAGACTCCTaGGTGCTCACCACTGTATCG | + |
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Preference number: 4 (lower is better) Translates to: PIVVDRAWLISSPRTLVLCTSDS*VLTTVS Trigger: CGATACAGTGGTGAGCACGCAGGAGTCTGAGGTGCA...GAGCACCAGGGTTCTAGGGCTGCTGATGAGCCAGGCACGGTCAACAACAATGGG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000115245.8 |
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| CDS-3UTR GCA 90 bp | GCCTGGCTCATCAGCAGCCCTAGAACCCTGGTGCTCATTCTCCATAGAAGGTCTGGGAAGTCTTCGGCCTaGTGCAGACAGACCTGCTGC | + |
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Preference number: 4 (lower is better) Translates to: AWLISSPRTLVLILHRRSGKSSA*CRQTCC Trigger: GCAGCAGGTCTGTCTGCAGCAGGCCGAAGACTTCCC...AGACCTTCTATGGAGAATGAGCACCAGGGTTCTAGGGCTGCTGATGAGCCAGGC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000115245.8 |
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| CDS-3UTR CCA 90 bp | CCCATTGTTGTTGACCGTGCCTGGCTCATCAGCAGCCCTAGAACCCTGGTGCTCAGGCATGTAGGCGTTTaGACGCTGCTCTGCAGTTGT | + |
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Preference number: 4 (lower is better) Translates to: PIVVDRAWLISSPRTLVLRHVGV*TLLCSC Trigger: ACAACTGCAGAGCAGCGTCCAAACGCCTACATGCCT...GAGCACCAGGGTTCTAGGGCTGCTGATGAGCCAGGCACGGTCAACAACAATGGG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000115245.8 |
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| CDS-3UTR TCA 90 bp | TTGTTGACCGTGCCTGGCTCATCAGCAGCCCTAGAACCCTGGTGCTCATTCTCCATCTCCAGTCTCCTCTaGATCACCTCCTTGCGCAGT | + |
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Preference number: 4 (lower is better) Translates to: LLTVPGSSAALEPWCSFSISSLL*ITSLRS Trigger: ACTGCGCAAGGAGGTGATTCAGAGGAGACTGGAGAT...GGAGAATGAGCACCAGGGTTCTAGGGCTGCTGATGAGCCAGGCACGGTCAACAA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000115245.8 |
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| CDS-3UTR TCA 90 bp | CCCATTGTTGTTGACCGTGCCTGGCTCATCAGCAGCCCTAGAACCCTGGTGCTCCATCCAGGGACTTCTTaGTTGGCACTAGTTTCCGTG | + |
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Preference number: 4 (lower is better) Translates to: PIVVDRAWLISSPRTLVLHPGTS*LALVSV Trigger: CACGGAAACTAGTGCCAATCAAGAAGTCCCTGGATG...GAGCACCAGGGTTCTAGGGCTGCTGATGAGCCAGGCACGGTCAACAACAATGGG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000115245.8 |
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| CDS-3UTR TCA 90 bp | TCCATAGAAGGTCTGAGGCTTGGCTCAGGCCCTCTCTGTGAGAGGACTGCTGGGTCCTTCTTGCAAGCCTaGGTTTTGCCTTTGAGCCTG | + |
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Preference number: 4 (lower is better) Translates to: SIEGLRLGSGPLCERTAGSFLQA*VLPLSL Trigger: CAGGCTCAAAGGCAAAACTCAGGCTTGCAAGAAGGA...CCCAGCAGTCCTCTCACAGAGAGGGCCTGAGCCAAGCCTCAGACCTTCTATGGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000115245.8 |
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| CDS-3UTR GCA 90 bp | TCCATAGAAGGTCTGAGGCTTGGCTCAGGCCCTCTCTGTGAGAGGACTGCTGGGTTGGAGTGCAGCTCATaGAGACAGAGGAAAGCTGGT | + |
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Preference number: 4 (lower is better) Translates to: SIEGLRLGSGPLCERTAGLECSS*RQRKAG Trigger: ACCAGCTTTCCTCTGTCTGCATGAGCTGCACTCCAA...CCCAGCAGTCCTCTCACAGAGAGGGCCTGAGCCAAGCCTCAGACCTTCTATGGA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000115245.8 |
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| CDS-3UTR GCA 90 bp | ACCGTGCCTGGCTCATCAGCAGCCCTAGAACCCTGGTGCTCATTCTCCATAGAATCCTCCAGCTCCTTCTaGTCCCTCACTAGCTGCTTC | + |
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Preference number: 4 (lower is better) Translates to: TVPGSSAALEPWCSFSIESSSSF*SLTSCF Trigger: GAAGCAGCTAGTGAGGGAGCAGAAGGAGCTGGAGGA...TTCTATGGAGAATGAGCACCAGGGTTCTAGGGCTGCTGATGAGCCAGGCACGGT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000115245.8 |
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| CDS-3UTR CCA 90 bp | CCTGGCTCATCAGCAGCCCTAGAACCCTGGTGCTCATTCTCCATAGAAGGTCTGTCCATGCTGGTCAGCTaGGCCTCCTTCTTCTCCTTC | + |
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Preference number: 4 (lower is better) Translates to: PGSSAALEPWCSFSIEGLSMLVS*ASFFSF Trigger: GAAGGAGAAGAAGGAGGCCCAGCTGACCAGCATGGA...CAGACCTTCTATGGAGAATGAGCACCAGGGTTCTAGGGCTGCTGATGAGCCAGG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000115245.8 |
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| CDS-3UTR TCA 90 bp | TGGCTCATCAGCAGCCCTAGAACCCTGGTGCTCATTCTCCATAGAAGGTCTGAGCTAGCTGCTTCTGCTTaGGCACCACATCTTCCCGCA | + |
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Preference number: 4 (lower is better) Translates to: WLISSPRTLVLILHRRSELAASA*APHLPA Trigger: TGCGGGAAGATGTGGTGCTCAAGCAGAAGCAGCTAG...CTCAGACCTTCTATGGAGAATGAGCACCAGGGTTCTAGGGCTGCTGATGAGCCA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000115245.8 |
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| CDS-3UTR TCA 90 bp | GCCTGGCTCATCAGCAGCCCTAGAACCCTGGTGCTCATTCTCCATAGAAGGTCTTGGCTTGTGCCTGAGTaGGCGCATCCAAAGACACTT | + |
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Preference number: 4 (lower is better) Translates to: AWLISSPRTLVLILHRRSWLVPE*AHPKTL Trigger: AAGTGTCTTTGGATGCGCTCACTCAGGCACAAGCCA...AGACCTTCTATGGAGAATGAGCACCAGGGTTCTAGGGCTGCTGATGAGCCAGGC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000115245.8 |
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| CDS-3UTR GCA 90 bp | ACCGTGCCTGGCTCATCAGCAGCCCTAGAACCCTGGTGCTCATTCTCCATAGAAACAGGTTTCCTAATGTaGCTCCTGTTGGCTCCGGGT | + |
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Preference number: 4 (lower is better) Translates to: TVPGSSAALEPWCSFSIETGFLM*LLLAPG Trigger: ACCCGGAGCCAACAGGAGGCACATTAGGAAACCTGT...TTCTATGGAGAATGAGCACCAGGGTTCTAGGGCTGCTGATGAGCCAGGCACGGT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000115245.8 |
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| CDS-3UTR CCA 90 bp | TCCATAGAAGGTCTGAGGCTTGGCTCAGGCCCTCTCTGTGAGAGGACTGCTGGGGCCGTGTATTCATTTTaGTACTTGAGCAGCTGCTCC | + |
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Preference number: 4 (lower is better) Translates to: SIEGLRLGSGPLCERTAGAVYSF*YLSSCS Trigger: GGAGCAGCTGCTCAAGTACCAAAATGAATACACGGC...CCCAGCAGTCCTCTCACAGAGAGGGCCTGAGCCAAGCCTCAGACCTTCTATGGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000115245.8 |
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| CDS-3UTR CCA 90 bp | TCCATAGAAGGTCTGAGGCTTGGCTCAGGCCCTCTCTGTGAGAGGACTGCTGGGTCTCTCACCTCCTTTTaGAGTTCAATGGTCAGGGCT | + |
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Preference number: 4 (lower is better) Translates to: SIEGLRLGSGPLCERTAGSLTSF*SSMVRA Trigger: AGCCCTGACCATTGAACTCCAAAAGGAGGTGAGAGA...CCCAGCAGTCCTCTCACAGAGAGGGCCTGAGCCAAGCCTCAGACCTTCTATGGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000115245.8 |
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| CDS-3UTR TCA 90 bp | CCTGGCTCATCAGCAGCCCTAGAACCCTGGTGCTCATTCTCCATAGAAGGTCTGGTCATCGTCTGTTTCTaGGGTTGCTGTTACCTCCTC | + |
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Preference number: 4 (lower is better) Translates to: PGSSAALEPWCSFSIEGLVIVCF*GCCYLL Trigger: GAGGAGGTAACAGCAACCTCAGAAACAGACGATGAC...CAGACCTTCTATGGAGAATGAGCACCAGGGTTCTAGGGCTGCTGATGAGCCAGG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000115245.8 |
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| CDS-3UTR TCA 90 bp | CCTGGCTCATCAGCAGCCCTAGAACCCTGGTGCTCATTCTCCATAGAAGGTCTGCTTCCCGCAGGTTTTTaGTCTCCAGTCTCCTCTGAA | + |
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Preference number: 4 (lower is better) Translates to: PGSSAALEPWCSFSIEGLLPAGF*SPVSSE Trigger: TTCAGAGGAGACTGGAGATCAAAAACCTGCGGGAAG...CAGACCTTCTATGGAGAATGAGCACCAGGGTTCTAGGGCTGCTGATGAGCCAGG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000115245.8 |
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| CDS-3UTR TCA 90 bp | CCCATTGTTGTTGACCGTGCCTGGCTCATCAGCAGCCCTAGAACCCTGGTGCTCTCATCTATTTTGATCTaGGTCATTCGCCCGAGGTTG | + |
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Preference number: 4 (lower is better) Translates to: PIVVDRAWLISSPRTLVLSSILI*VIRPRL Trigger: CAACCTCGGGCGAATGACTCAGATCAAAATAGATGA...GAGCACCAGGGTTCTAGGGCTGCTGATGAGCCAGGCACGGTCAACAACAATGGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000115245.8 |
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| CDS-3UTR TCA 90 bp | ACCGTGCCTGGCTCATCAGCAGCCCTAGAACCCTGGTGCTCATTCTCCATAGAAGTGCACTGTGAAAACTaGATCTGGATCACAGCCAGG | + |
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Preference number: 4 (lower is better) Translates to: TVPGSSAALEPWCSFSIEVHCEN*IWITAR Trigger: CCTGGCTGTGATCCAGATTCAGTTTTCACAGTGCAC...TTCTATGGAGAATGAGCACCAGGGTTCTAGGGCTGCTGATGAGCCAGGCACGGT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000115245.8 |
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| CDS-3UTR GCA 90 bp | ACCGTGCCTGGCTCATCAGCAGCCCTAGAACCCTGGTGCTCATTCTCCATAGAAAGTTTTCCCTTGGAGTaGAGCTCATGCAGACAGAGG | + |
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Preference number: 4 (lower is better) Translates to: TVPGSSAALEPWCSFSIESFPLE*SSCRQR Trigger: CCTCTGTCTGCATGAGCTGCACTCCAAGGGAAAACT...TTCTATGGAGAATGAGCACCAGGGTTCTAGGGCTGCTGATGAGCCAGGCACGGT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000115245.8 |
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| CDS-3UTR GCA 90 bp | TGGCTCATCAGCAGCCCTAGAACCCTGGTGCTCATTCTCCATAGAAGGTCTGAGTGCGCAGTTCCTCAGTaGTTTCTTTCAGGAGCCTCG | + |
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Preference number: 4 (lower is better) Translates to: WLISSPRTLVLILHRRSECAVPQ*FLSGAS Trigger: CGAGGCTCCTGAAAGAAAGCACTGAGGAACTGCGCA...CTCAGACCTTCTATGGAGAATGAGCACCAGGGTTCTAGGGCTGCTGATGAGCCA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000115245.8 |
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| CDS-3UTR GCA 90 bp | GCCTGGCTCATCAGCAGCCCTAGAACCCTGGTGCTCATTCTCCATAGAAGGTCTTACTTCTTGCGCAGCTaGACCATCTCCTCTTCGATC | + |
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Preference number: 4 (lower is better) Translates to: AWLISSPRTLVLILHRRSYFLRS*TISSSI Trigger: GATCGAAGAGGAGATGGTGCAGCTGCGCAAGAAGTA...AGACCTTCTATGGAGAATGAGCACCAGGGTTCTAGGGCTGCTGATGAGCCAGGC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000115245.8 |
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| CDS-3UTR GCA 90 bp | GTTGACCGTGCCTGGCTCATCAGCAGCCCTAGAACCCTGGTGCTCATTCTCCATGCAGTGTGTCCTTCTTaGAAGCCTGAGTTTTGCCTT | + |
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Preference number: 4 (lower is better) Translates to: VDRAWLISSPRTLVLILHAVCPS*KPEFCL Trigger: AAGGCAAAACTCAGGCTTGCAAGAAGGACACACTGC...ATGGAGAATGAGCACCAGGGTTCTAGGGCTGCTGATGAGCCAGGCACGGTCAAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000115245.8 |
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| CDS-3UTR TCA 90 bp | TCCATAGAAGGTCTGAGGCTTGGCTCAGGCCCTCTCTGTGAGAGGACTGCTGGGCTTCCGCAAGAGTGTTaGCTTTGTTTTCAAGCTTCT | + |
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Preference number: 4 (lower is better) Translates to: SIEGLRLGSGPLCERTAGLPQEC*LCFQAS Trigger: AGAAGCTTGAAAACAAAGTCAACACTCTTGCGGAAG...CCCAGCAGTCCTCTCACAGAGAGGGCCTGAGCCAAGCCTCAGACCTTCTATGGA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000115245.8 |
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| CDS-3UTR TCA 90 bp | TCCATAGAAGGTCTGAGGCTTGGCTCAGGCCCTCTCTGTGAGAGGACTGCTGGGCATACTCTCGTTCTTTaGCTTCTAGTAAGGTTCGCT | + |
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Preference number: 4 (lower is better) Translates to: SIEGLRLGSGPLCERTAGHTLVL*LLVRFA Trigger: AGCGAACCTTACTAGAAGTCAAAGAACGAGAGTATG...CCCAGCAGTCCTCTCACAGAGAGGGCCTGAGCCAAGCCTCAGACCTTCTATGGA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000115245.8 |
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| CDS-3UTR TCA 90 bp | CCTGGCTCATCAGCAGCCCTAGAACCCTGGTGCTCATTCTCCATAGAAGGTCTGACACCTGCTCATAGATaGAATCCTTCTCCAGGAGCT | + |
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Preference number: 4 (lower is better) Translates to: PGSSAALEPWCSFSIEGLTPAHR*NPSPGA Trigger: AGCTCCTGGAGAAGGATTTCATCTATGAGCAGGTGT...CAGACCTTCTATGGAGAATGAGCACCAGGGTTCTAGGGCTGCTGATGAGCCAGG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000115245.8 |
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| CDS-3UTR GCA 90 bp | GCCTGGCTCATCAGCAGCCCTAGAACCCTGGTGCTCATTCTCCATAGAAGGTCTCTTGGCTTTCAACTCTaGCATTCTGGTTCCAGGAAG | + |
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Preference number: 4 (lower is better) Translates to: AWLISSPRTLVLILHRRSLGFQL*HSGSRK Trigger: CTTCCTGGAACCAGAATGGCAGAGTTGAAAGCCAAG...AGACCTTCTATGGAGAATGAGCACCAGGGTTCTAGGGCTGCTGATGAGCCAGGC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000115245.8 |
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| CDS-3UTR CCA 90 bp | GCCTGGCTCATCAGCAGCCCTAGAACCCTGGTGCTCATTCTCCATAGAAGGTCTGAAGGGAGGTCTTCTTaGTCATCGTCTGTTTCTGAG | + |
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Preference number: 4 (lower is better) Translates to: AWLISSPRTLVLILHRRSEGRSS*SSSVSE Trigger: CTCAGAAACAGACGATGACCAAGAAGACCTCCCTTC...AGACCTTCTATGGAGAATGAGCACCAGGGTTCTAGGGCTGCTGATGAGCCAGGC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000115245.8 |
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| CDS-3UTR CCA 90 bp | CCTGGCTCATCAGCAGCCCTAGAACCCTGGTGCTCATTCTCCATAGAAGGTCTGGCTTCTCCTCCTTCTTaGCTATCTGAAGTTCCAGCA | + |
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Preference number: 4 (lower is better) Translates to: PGSSAALEPWCSFSIEGLASPPS*LSEVPA Trigger: TGCTGGAACTTCAGATAGCCAAGAAGGAGGAGAAGC...CAGACCTTCTATGGAGAATGAGCACCAGGGTTCTAGGGCTGCTGATGAGCCAGG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000115245.8 |
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| CDS-3UTR GCA 90 bp | ACCGTGCCTGGCTCATCAGCAGCCCTAGAACCCTGGTGCTCATTCTCCATAGAACGTGTCACAGAAATCTaGCTTTGCTTTTCGGCAATC | + |
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Preference number: 4 (lower is better) Translates to: TVPGSSAALEPWCSFSIERVTEI*LCFSAI Trigger: GATTGCCGAAAAGCAAAGGCAGATTTCTGTGACACG...TTCTATGGAGAATGAGCACCAGGGTTCTAGGGCTGCTGATGAGCCAGGCACGGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000115245.8 |
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| CDS-3UTR CCA 90 bp | GCCTGGCTCATCAGCAGCCCTAGAACCCTGGTGCTCATTCTCCATAGAAGGTCTCCTTTTGGAGTTCAATaGTCAGGGCTTGTTTCATGG | + |
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Preference number: 4 (lower is better) Translates to: AWLISSPRTLVLILHRRSPFGVQ*SGLVSW Trigger: CCATGAAACAAGCCCTGACCATTGAACTCCAAAAGG...AGACCTTCTATGGAGAATGAGCACCAGGGTTCTAGGGCTGCTGATGAGCCAGGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000115245.8 |
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| CDS-3UTR CCA 90 bp | ACCGTGCCTGGCTCATCAGCAGCCCTAGAACCCTGGTGCTCATTCTCCATAGAATTGTATAAACACCATTaGGCAGCTGCCGATAATCCG | + |
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Preference number: 4 (lower is better) Translates to: TVPGSSAALEPWCSFSIELYKHH*AAADNP Trigger: CGGATTATCGGCAGCTGCCCAATGGTGTTTATACAA...TTCTATGGAGAATGAGCACCAGGGTTCTAGGGCTGCTGATGAGCCAGGCACGGT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000115245.8 |
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| 3UTR CAA 72 bp | GTACAAGGAAGCCACTGCTTTGGAAACAACCCATTGTaGTTGACCGTGCCTGGCTCATCAGCAGCCCTAGAA | + |
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Preference number: 4 (lower is better) Translates to: VQGSHCFGNNPL*LTVPGSSAALE Trigger: TTCTAGGGCTGCTGATGAGCCAGGCACGGTCAACAACAATGGGTTGTTTCCAAAGCAGTGGCTTCCTTGTAC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000115245.8 |
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| CDS-3UTR GCA 90 bp | GCCTGGCTCATCAGCAGCCCTAGAACCCTGGTGCTCATTCTCCATAGAAGGTCTTTGTACTCCCTTTCTTaGGCTGCCGTGTATTCATTT | + |
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Preference number: 4 (lower is better) Translates to: AWLISSPRTLVLILHRRSLYSLS*AAVYSF Trigger: AAATGAATACACGGCAGCGCAAGAAAGGGAGTACAA...AGACCTTCTATGGAGAATGAGCACCAGGGTTCTAGGGCTGCTGATGAGCCAGGC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000115245.8 |
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| CDS-3UTR GCA 90 bp | CCCATTGTTGTTGACCGTGCCTGGCTCATCAGCAGCCCTAGAACCCTGGTGCTCCGTTCTTTCTCTCTTTaGTTACGAGAAAGTTCATCA | + |
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Preference number: 4 (lower is better) Translates to: PIVVDRAWLISSPRTLVLRSFSL*LRESSS Trigger: TGATGAACTTTCTCGTAAGCAAAGAGAGAAAGAACG...GAGCACCAGGGTTCTAGGGCTGCTGATGAGCCAGGCACGGTCAACAACAATGGG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000115245.8 |
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| CDS-3UTR GCA 90 bp | CCTGGCTCATCAGCAGCCCTAGAACCCTGGTGCTCATTCTCCATAGAAGGTCTGGTTTGGACGCTGCTCTaGAGTTGTATAAACACCATT | + |
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Preference number: 4 (lower is better) Translates to: PGSSAALEPWCSFSIEGLVWTLL*SCINTI Trigger: AATGGTGTTTATACAACTGCAGAGCAGCGTCCAAAC...CAGACCTTCTATGGAGAATGAGCACCAGGGTTCTAGGGCTGCTGATGAGCCAGG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000115245.8 |
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| CDS-3UTR CCA 90 bp | TGGCTCATCAGCAGCCCTAGAACCCTGGTGCTCATTCTCCATAGAAGGTCTGAGGTAGCAAGGTGTACTTaGCTTTCAACTCTGCCATTC | + |
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Preference number: 4 (lower is better) Translates to: WLISSPRTLVLILHRRSEVARCT*LSTLPF Trigger: GAATGGCAGAGTTGAAAGCCAAGTACACCTTGCTAC...CTCAGACCTTCTATGGAGAATGAGCACCAGGGTTCTAGGGCTGCTGATGAGCCA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000115245.8 |
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| CDS-3UTR CCA 90 bp | CCTGGCTCATCAGCAGCCCTAGAACCCTGGTGCTCATTCTCCATAGAAGGTCTGAGATCAACCTCTTTGTaGAGCTCTTTCCTTCGTTCA | + |
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Preference number: 4 (lower is better) Translates to: PGSSAALEPWCSFSIEGLRSTSL*SSFLRS Trigger: TGAACGAAGGAAAGAGCTCCACAAAGAGGTTGATCT...CAGACCTTCTATGGAGAATGAGCACCAGGGTTCTAGGGCTGCTGATGAGCCAGG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000115245.8 |
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| CDS-3UTR CCA 90 bp | CCCATTGTTGTTGACCGTGCCTGGCTCATCAGCAGCCCTAGAACCCTGGTGCTCTTCTCCTTCATTTCCTaGAGTTTAGCAGTGATTTTG | + |
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Preference number: 4 (lower is better) Translates to: PIVVDRAWLISSPRTLVLFSFIS*SLAVIL Trigger: CAAAATCACTGCTAAACTCCAGGAAATGAAGGAGAA...GAGCACCAGGGTTCTAGGGCTGCTGATGAGCCAGGCACGGTCAACAACAATGGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000115245.8 |
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| CDS-3UTR CCA 90 bp | CCTGGCTCATCAGCAGCCCTAGAACCCTGGTGCTCATTCTCCATAGAAGGTCTGAGCTATTCATCTTCTTaGCTAAGAGCAGTGTGTCCT | + |
|
Preference number: 4 (lower is better) Translates to: PGSSAALEPWCSFSIEGLSYSSS*LRAVCP Trigger: AGGACACACTGCTCTTAGCCAAGAAGATGAATAGCT...CAGACCTTCTATGGAGAATGAGCACCAGGGTTCTAGGGCTGCTGATGAGCCAGG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000115245.8 |
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| 3UTR CAA 72 bp | AATGTACAAGGAAGCCACTGCTTTGGAAACAACCCATaGTTGTTGACCGTGCCTGGCTCATCAGCAGCCCTA | + |
|
Preference number: 4 (lower is better) Translates to: NVQGSHCFGNNP*LLTVPGSSAAL Trigger: TAGGGCTGCTGATGAGCCAGGCACGGTCAACAACAATGGGTTGTTTCCAAAGCAGTGGCTTCCTTGTACATT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000115245.8 |
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| CDS-3UTR TCA 90 bp | TTGTTGACCGTGCCTGGCTCATCAGCAGCCCTAGAACCCTGGTGCTCATTCTCCTCTTCTTGTATAGCCTaGTTTCAAGGTCCTTTGATT | + |
|
Preference number: 4 (lower is better) Translates to: LLTVPGSSAALEPWCSFSSSCIA*FQGPLI Trigger: AATCAAAGGACCTTGAAATCAGGCTATACAAGAAGA...GGAGAATGAGCACCAGGGTTCTAGGGCTGCTGATGAGCCAGGCACGGTCAACAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000115245.8 |
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| CDS-3UTR TCA 90 bp | ACCGTGCCTGGCTCATCAGCAGCCCTAGAACCCTGGTGCTCATTCTCCATAGAATCTCTGAGTCTCCTATaGATTTCATGCTTTCTCTTC | + |
|
Preference number: 4 (lower is better) Translates to: TVPGSSAALEPWCSFSIESLSLL*ISCFLF Trigger: GAAGAGAAAGCATGAAATTCATAGGAGACTCAGAGA...TTCTATGGAGAATGAGCACCAGGGTTCTAGGGCTGCTGATGAGCCAGGCACGGT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000115245.8 |
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| CDS-3UTR CCA 90 bp | GGCTCATCAGCAGCCCTAGAACCCTGGTGCTCATTCTCCATAGAAGGTCTGAGGTCACTATATCTTCGCTaGGCTTTCAGGAAATCCTTA | + |
|
Preference number: 4 (lower is better) Translates to: GSSAALEPWCSFSIEGLRSLYLR*AFRKSL Trigger: TAAGGATTTCCTGAAAGCCCAGCGAAGATATAGTGA...CCTCAGACCTTCTATGGAGAATGAGCACCAGGGTTCTAGGGCTGCTGATGAGCC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000115245.8 |
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| CDS-3UTR CCA 90 bp | ACCGTGCCTGGCTCATCAGCAGCCCTAGAACCCTGGTGCTCATTCTCCATAGAATGGAATGCTTTAGCATaGCGTTTTGTAGCTTTCGTT | + |
|
Preference number: 4 (lower is better) Translates to: TVPGSSAALEPWCSFSIEWNALA*RFVAFV Trigger: AACGAAAGCTACAAAACGCCATGCTAAAGCATTCCA...TTCTATGGAGAATGAGCACCAGGGTTCTAGGGCTGCTGATGAGCCAGGCACGGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000115245.8 |
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| CDS-3UTR GCA 90 bp | GGCTCATCAGCAGCCCTAGAACCCTGGTGCTCATTCTCCATAGAAGGTCTGAGGCTTTTATCCTGTCTGTaGACTGTGAAAACTGAATCT | + |
|
Preference number: 4 (lower is better) Translates to: GSSAALEPWCSFSIEGLRLLSCL*TVKTES Trigger: AGATTCAGTTTTCACAGTGCACAGACAGGATAAAAG...CCTCAGACCTTCTATGGAGAATGAGCACCAGGGTTCTAGGGCTGCTGATGAGCC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000115245.8 |
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| CDS-3UTR CCA 90 bp | ACCGTGCCTGGCTCATCAGCAGCCCTAGAACCCTGGTGCTCATTCTCCATAGAAAGAGCCATCATTTCCTaGGTAACAACTTTGATCTTT | + |
|
Preference number: 4 (lower is better) Translates to: TVPGSSAALEPWCSFSIERAIIS*VTTLIF Trigger: AAAGATCAAAGTTGTTACCCAGGAAATGATGGCTCT...TTCTATGGAGAATGAGCACCAGGGTTCTAGGGCTGCTGATGAGCCAGGCACGGT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000115245.8 |
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| CDS-3UTR TCA 90 bp | GTGAATGTACAAGGAAGCCACTGCTTTGGAAACAACCCATTGTTGTTGACCGTGGACAGAGATTTCTGTTaGGCCAGATTTCTCCTAGCT | + |
|
Preference number: 4 (lower is better) Translates to: VNVQGSHCFGNNPLLLTVDRDFC*ARFLLA Trigger: AGCTAGGAGAAATCTGGCTCAACAGAAATCTCTGTC...CACGGTCAACAACAATGGGTTGTTTCCAAAGCAGTGGCTTCCTTGTACATTCAC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000115245.8 |
||
| CDS-3UTR CCA 90 bp | GTGAATGTACAAGGAAGCCACTGCTTTGGAAACAACCCATTGTTGTTGACCGTGTCAACTCTGCCATTCTaGTTCCAGGAAGTTTTCCCT | + |
|
Preference number: 4 (lower is better) Translates to: VNVQGSHCFGNNPLLLTVSTLPF*FQEVFP Trigger: AGGGAAAACTTCCTGGAACCAGAATGGCAGAGTTGA...CACGGTCAACAACAATGGGTTGTTTCCAAAGCAGTGGCTTCCTTGTACATTCAC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000115245.8 |
||
| CDS-3UTR TCA 90 bp | GTGAATGTACAAGGAAGCCACTGCTTTGGAAACAACCCATTGTTGTTGACCGTGGACAGTTCCGTAGATTaGTATCCAAGATCCCTCTTT | + |
|
Preference number: 4 (lower is better) Translates to: VNVQGSHCFGNNPLLLTVDSSVD*YPRSLF Trigger: AAAGAGGGATCTTGGATATCAATCTACGGAACTGTC...CACGGTCAACAACAATGGGTTGTTTCCAAAGCAGTGGCTTCCTTGTACATTCAC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000115245.8 |
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| CDS-3UTR GCA 90 bp | GTGAATGTACAAGGAAGCCACTGCTTTGGAAACAACCCATTGTTGTTGACCGTGCTAGTAAGGTTCGCTTaGCCTCAACTTCCTTCATTA | + |
|
Preference number: 4 (lower is better) Translates to: VNVQGSHCFGNNPLLLTVLVRFA*PQLPSL Trigger: TAATGAAGGAAGTTGAGGGCAAGCGAACCTTACTAG...CACGGTCAACAACAATGGGTTGTTTCCAAAGCAGTGGCTTCCTTGTACATTCAC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000115245.8 |
||
| CDS-3UTR GCA 90 bp | GTGAATGTACAAGGAAGCCACTGCTTTGGAAACAACCCATTGTTGTTGACCGTGACAGAAATCTGCCTTTaGTTTTCGGCAATCCTCAGT | + |
|
Preference number: 4 (lower is better) Translates to: VNVQGSHCFGNNPLLLTVTEICL*FSAILS Trigger: ACTGAGGATTGCCGAAAAGCAAAGGCAGATTTCTGT...CACGGTCAACAACAATGGGTTGTTTCCAAAGCAGTGGCTTCCTTGTACATTCAC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000115245.8 |
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| CDS-3UTR GCA 90 bp | GTGAATGTACAAGGAAGCCACTGCTTTGGAAACAACCCATTGTTGTTGACCGTGTCCCGCAAACTTTCTTaGTCCTTTAGAAGTTTGTTC | + |
|
Preference number: 4 (lower is better) Translates to: VNVQGSHCFGNNPLLLTVSRKLS*SFRSLF Trigger: GAACAAACTTCTAAAGGAGCAAGAAAGTTTGCGGGA...CACGGTCAACAACAATGGGTTGTTTCCAAAGCAGTGGCTTCCTTGTACATTCAC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000115245.8 |
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| CDS TCA 90 bp | CTTCGGCCTGCTGCAGACAGACCTGCTGCTGCTGGATCTGCTCCGTaGAGCGCTTGGCGTTCTCCAGTAGCTGCACCTCAGACTCCTGCG | + |
|
Preference number: 5 (lower is better) Translates to: LRPAADRPAAAGSAP*SAWRSPVAAPQTPA Trigger: CGCAGGAGTCTGAGGTGCAGCTACTGGAGAACGCCAAGCGCTTCACGGAGCAGATCCAGCAGCAGCAGGTCTGTCTGCAGCAGGCCGAAG 62% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000030552.7 ENSMUST00000115245.8 |
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| CDS GCA 90 bp | GGGAAGTCTTCGGCCTGCTGCAGACAGACCTGCTGCTGCTGGATCTaGTCCGTGAAGCGCTTGGCGTTCTCCAGTAGCTGCACCTCAGAC | + |
|
Preference number: 5 (lower is better) Translates to: GKSSACCRQTCCCWI*SVKRLAFSSSCTSD Trigger: GTCTGAGGTGCAGCTACTGGAGAACGCCAAGCGCTTCACGGAGCAGATCCAGCAGCAGCAGGTCTGTCTGCAGCAGGCCGAAGACTTCCC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000030552.7 ENSMUST00000115245.8 |
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| CDS CCA 90 bp | ACGTTGGGGAAGTCTTCGGCCTGCTGCAGACAGACCTGCTGCTGCTaGATCTGCTCCGTGAAGCGCTTGGCGTTCTCCAGTAGCTGCACC | + |
|
Preference number: 5 (lower is better) Translates to: TLGKSSACCRQTCCC*ICSVKRLAFSSSCT Trigger: GGTGCAGCTACTGGAGAACGCCAAGCGCTTCACGGAGCAGATCCAGCAGCAGCAGGTCTGTCTGCAGCAGGCCGAAGACTTCCCCAACGT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000030552.7 ENSMUST00000115245.8 |
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| CDS GCA 90 bp | AAGACGTTGGGGAAGTCTTCGGCCTGCTGCAGACAGACCTGCTGCTaGTGGATCTGCTCCGTGAAGCGCTTGGCGTTCTCCAGTAGCTGC | + |
|
Preference number: 5 (lower is better) Translates to: KTLGKSSACCRQTCC*WICSVKRLAFSSSC Trigger: GCAGCTACTGGAGAACGCCAAGCGCTTCACGGAGCAGATCCAGCAGCAGCAGGTCTGTCTGCAGCAGGCCGAAGACTTCCCCAACGTCTT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000030552.7 ENSMUST00000115245.8 |
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| CDS GCA 90 bp | GTGAAGACGTTGGGGAAGTCTTCGGCCTGCTGCAGACAGACCTGCTaGTGCTGGATCTGCTCCGTGAAGCGCTTGGCGTTCTCCAGTAGC | + |
|
Preference number: 5 (lower is better) Translates to: VKTLGKSSACCRQTC*CWICSVKRLAFSSS Trigger: GCTACTGGAGAACGCCAAGCGCTTCACGGAGCAGATCCAGCAGCAGCAGGTCTGTCTGCAGCAGGCCGAAGACTTCCCCAACGTCTTCAC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000030552.7 ENSMUST00000115245.8 |
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| CDS GCA 90 bp | GTGGTGAAGACGTTGGGGAAGTCTTCGGCCTGCTGCAGACAGACCTaGTGCTGCTGGATCTGCTCCGTGAAGCGCTTGGCGTTCTCCAGT | + |
|
Preference number: 5 (lower is better) Translates to: VVKTLGKSSACCRQT*CCWICSVKRLAFSS Trigger: ACTGGAGAACGCCAAGCGCTTCACGGAGCAGATCCAGCAGCAGCAGGTCTGTCTGCAGCAGGCCGAAGACTTCCCCAACGTCTTCACCAC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000030552.7 ENSMUST00000115245.8 |
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| CDS-3UTR CAA 90 bp | CCCATTGTTGTTGACCGTGCCTGGCTCATCAGCAGCCCTAGAACCCTGGTGCTCAAGCGGACCCTGCCCTaGCTGTCAGGGTTCACAAAG | + |
|
Preference number: 5 (lower is better) Translates to: PIVVDRAWLISSPRTLVLKRTLP*LSGFTK Trigger: CTTTGTGAACCCTGACAGCAAGGGCAGGGTCCGCTT...GAGCACCAGGGTTCTAGGGCTGCTGATGAGCCAGGCACGGTCAACAACAATGGG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000115245.8 |
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| CDS GCA 90 bp | TGCTGCTGGATCTGCTCCGTGAAGCGCTTGGCGTTCTCCAGTAGCTaGACCTCAGACTCCTGCGTGCTCACCACTGTATCGTGTAGCAAG | + |
|
Preference number: 5 (lower is better) Translates to: CCWICSVKRLAFSSS*TSDSCVLTTVSCSK Trigger: CTTGCTACACGATACAGTGGTGAGCACGCAGGAGTCTGAGGTGCAGCTACTGGAGAACGCCAAGCGCTTCACGGAGCAGATCCAGCAGCA 58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000030552.7 ENSMUST00000115245.8 |
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| CDS-3UTR CAA 90 bp | TTGTTGACCGTGCCTGGCTCATCAGCAGCCCTAGAACCCTGGTGCTCATTCTCCCAGGCATGTAGGCGTTaGGACGCTGCTCTGCAGTTG | + |
|
Preference number: 5 (lower is better) Translates to: LLTVPGSSAALEPWCSFSQACRR*DAALQL Trigger: CAACTGCAGAGCAGCGTCCAAACGCCTACATGCCTG...GGAGAATGAGCACCAGGGTTCTAGGGCTGCTGATGAGCCAGGCACGGTCAACAA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000115245.8 |
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| CDS-3UTR CAA 90 bp | TTGTTGACCGTGCCTGGCTCATCAGCAGCCCTAGAACCCTGGTGCTCATTCTCCATCGCGCCATACGGTTaGGGCAGAGGAAGCTCGGTA | + |
|
Preference number: 5 (lower is better) Translates to: LLTVPGSSAALEPWCSFSIAPYG*GRGSSV Trigger: TACCGAGCTTCCTCTGCCCAAACCGTATGGCGCGAT...GGAGAATGAGCACCAGGGTTCTAGGGCTGCTGATGAGCCAGGCACGGTCAACAA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000115245.8 |
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| CDS GCA 90 bp | CTTTCATTCCGCCGCTGTACGGCCTTCTCATACTTCTTGCGCAGCTaGACCATCTCCTCTTCGATCACGGTGATCATGCTGGCCAGCCTG | + |
|
Preference number: 5 (lower is better) Translates to: LSFRRCTAFSYFLRS*TISSSITVIMLASL Trigger: CAGGCTGGCCAGCATGATCACCGTGATCGAAGAGGAGATGGTGCAGCTGCGCAAGAAGTATGAGAAGGCCGTACAGCGGCGGAATGAAAG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000115245.8 |
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| CDS GCA 90 bp | TCCGTGAAGCGCTTGGCGTTCTCCAGTAGCTGCACCTCAGACTCCTaGGTGCTCACCACTGTATCGTGTAGCAAGGTGTACTTGGCTTTC | + |
|
Preference number: 5 (lower is better) Translates to: SVKRLAFSSSCTSDS*VLTTVSCSKVYLAF Trigger: GAAAGCCAAGTACACCTTGCTACACGATACAGTGGTGAGCACGCAGGAGTCTGAGGTGCAGCTACTGGAGAACGCCAAGCGCTTCACGGA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000030552.7 ENSMUST00000115245.8 |
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| CDS GCA 90 bp | TGGAGCCATCGCGCCATACGGTTTGGGCAGAGGAAGCTCGGTATCTaGTTCAGGCATGTAGGCGTTTGGACGCTGCTCTGCAGTTGTATA | + |
|
Preference number: 5 (lower is better) Translates to: WSHRAIRFGQRKLGI*FRHVGVWTLLCSCI Trigger: TATACAACTGCAGAGCAGCGTCCAAACGCCTACATGCCTGAAGCAGATACCGAGCTTCCTCTGCCCAAACCGTATGGCGCGATGGCTCCA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000115245.8 |
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| CDS CCA 90 bp | TTTCCTAATGTGCCTCCTGTTGGCTCCGGGTTCAGAGGGCTTAAATaGAGCCATCGCGCCATACGGTTTGGGCAGAGGAAGCTCGGTATC | + |
|
Preference number: 5 (lower is better) Translates to: FPNVPPVGSGFRGLK*SHRAIRFGQRKLGI Trigger: GATACCGAGCTTCCTCTGCCCAAACCGTATGGCGCGATGGCTCCATTTAAGCCCTCTGAACCCGGAGCCAACAGGAGGCACATTAGGAAA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000115245.8 |
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| CDS-3UTR CAA 90 bp | CCCATTGTTGTTGACCGTGCCTGGCTCATCAGCAGCCCTAGAACCCTGGTGCTCCGTCTGTTTCTGAGGTaGCTGTTACCTCCTCCTTCT | + |
|
Preference number: 5 (lower is better) Translates to: PIVVDRAWLISSPRTLVLRLFLR*LLPPPS Trigger: AGAAGGAGGAGGTAACAGCAACCTCAGAAACAGACG...GAGCACCAGGGTTCTAGGGCTGCTGATGAGCCAGGCACGGTCAACAACAATGGG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000115245.8 |
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| CDS-3UTR CAA 90 bp | GCCTGGCTCATCAGCAGCCCTAGAACCCTGGTGCTCATTCTCCATAGAAGGTCTAGCTGCTCCCGAAGTTaGCAGACCTCAGTGGTGAAG | + |
|
Preference number: 5 (lower is better) Translates to: AWLISSPRTLVLILHRRSSCSRS*QTSVVK Trigger: CTTCACCACTGAGGTCTGCAAACTTCGGGAGCAGCT...AGACCTTCTATGGAGAATGAGCACCAGGGTTCTAGGGCTGCTGATGAGCCAGGC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000115245.8 |
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| CDS-3UTR CAA 90 bp | CCTGGCTCATCAGCAGCCCTAGAACCCTGGTGCTCATTCTCCATAGAAGGTCTGACTAGCTGCTTCTGCTaGAGCACCACATCTTCCCGC | + |
|
Preference number: 5 (lower is better) Translates to: PGSSAALEPWCSFSIEGLTSCFC*STTSSR Trigger: GCGGGAAGATGTGGTGCTCAAGCAGAAGCAGCTAGT...CAGACCTTCTATGGAGAATGAGCACCAGGGTTCTAGGGCTGCTGATGAGCCAGG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000115245.8 |
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| CDS CCA 90 bp | TTTGGGCAGAGGAAGCTCGGTATCTGCTTCAGGCATGTAGGCGTTTaGACGCTGCTCTGCAGTTGTATAAACACCATTGGGCAGCTGCCG | + |
|
Preference number: 5 (lower is better) Translates to: FGQRKLGICFRHVGV*TLLCSCINTIGQLP Trigger: CGGCAGCTGCCCAATGGTGTTTATACAACTGCAGAGCAGCGTCCAAACGCCTACATGCCTGAAGCAGATACCGAGCTTCCTCTGCCCAAA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000115245.8 |
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| CDS-3UTR CAA 90 bp | GCCTGGCTCATCAGCAGCCCTAGAACCCTGGTGCTCATTCTCCATAGAAGGTCTCTCTCTCACCTCCTTTaGGAGTTCAATGGTCAGGGC | + |
|
Preference number: 5 (lower is better) Translates to: AWLISSPRTLVLILHRRSLSHLL*EFNGQG Trigger: GCCCTGACCATTGAACTCCAAAAGGAGGTGAGAGAG...AGACCTTCTATGGAGAATGAGCACCAGGGTTCTAGGGCTGCTGATGAGCCAGGC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000115245.8 |
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| CDS-3UTR CAA 90 bp | GTTGACCGTGCCTGGCTCATCAGCAGCCCTAGAACCCTGGTGCTCATTCTCCATTGCCGTGTATTCATTTaGGTACTTGAGCAGCTGCTC | + |
|
Preference number: 5 (lower is better) Translates to: VDRAWLISSPRTLVLILHCRVFI*VLEQLL Trigger: GAGCAGCTGCTCAAGTACCAAAATGAATACACGGCA...ATGGAGAATGAGCACCAGGGTTCTAGGGCTGCTGATGAGCCAGGCACGGTCAAC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000115245.8 |
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| CDS-3UTR CAA 90 bp | TGGCTCATCAGCAGCCCTAGAACCCTGGTGCTCATTCTCCATAGAAGGTCTGAGTGCTGCTCCACTAACTaGGCCTCAGCTTCTGACAGA | + |
|
Preference number: 5 (lower is better) Translates to: WLISSPRTLVLILHRRSECCSTN*ASASDR Trigger: TCTGTCAGAAGCTGAGGCCAAGTTAGTGGAGCAGCA...CTCAGACCTTCTATGGAGAATGAGCACCAGGGTTCTAGGGCTGCTGATGAGCCA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000115245.8 |
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| CDS-3UTR CAA 90 bp | GTTGACCGTGCCTGGCTCATCAGCAGCCCTAGAACCCTGGTGCTCATTCTCCATCACAGAAATCTGCCTTaGCTTTTCGGCAATCCTCAG | + |
|
Preference number: 5 (lower is better) Translates to: VDRAWLISSPRTLVLILHHRNLP*LFGNPQ Trigger: CTGAGGATTGCCGAAAAGCAAAGGCAGATTTCTGTG...ATGGAGAATGAGCACCAGGGTTCTAGGGCTGCTGATGAGCCAGGCACGGTCAAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000115245.8 |
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| CDS-3UTR CAA 90 bp | GCCTGGCTCATCAGCAGCCCTAGAACCCTGGTGCTCATTCTCCATAGAAGGTCTGCATCCAGGGACTTCTaGATTGGCACTAGTTTCCGT | + |
|
Preference number: 5 (lower is better) Translates to: AWLISSPRTLVLILHRRSASRDF*IGTSFR Trigger: ACGGAAACTAGTGCCAATCAAGAAGTCCCTGGATGC...AGACCTTCTATGGAGAATGAGCACCAGGGTTCTAGGGCTGCTGATGAGCCAGGC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000115245.8 |
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| CDS-3UTR CAA 90 bp | TTGTTGACCGTGCCTGGCTCATCAGCAGCCCTAGAACCCTGGTGCTCATTCTCCTGTAGCAAGGTGTACTaGGCTTTCAACTCTGCCATT | + |
|
Preference number: 5 (lower is better) Translates to: LLTVPGSSAALEPWCSFSCSKVY*AFNSAI Trigger: AATGGCAGAGTTGAAAGCCAAGTACACCTTGCTACA...GGAGAATGAGCACCAGGGTTCTAGGGCTGCTGATGAGCCAGGCACGGTCAACAA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000115245.8 |
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| CDS-3UTR CAA 90 bp | ACCGTGCCTGGCTCATCAGCAGCCCTAGAACCCTGGTGCTCATTCTCCATAGAATTGTACAGGAACACTTaGATGGTGGACCACGTCATC | + |
|
Preference number: 5 (lower is better) Translates to: TVPGSSAALEPWCSFSIELYRNT*MVDHVI Trigger: GATGACGTGGTCCACCATCAAAGTGTTCCTGTACAA...TTCTATGGAGAATGAGCACCAGGGTTCTAGGGCTGCTGATGAGCCAGGCACGGT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000115245.8 |
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| CDS-3UTR CAA 90 bp | TTGTTGACCGTGCCTGGCTCATCAGCAGCCCTAGAACCCTGGTGCTCATTCTCCTCTAGTAAGGTTCGCTaGCCCTCAACTTCCTTCATT | + |
|
Preference number: 5 (lower is better) Translates to: LLTVPGSSAALEPWCSFSSSKVR*PSTSFI Trigger: AATGAAGGAAGTTGAGGGCAAGCGAACCTTACTAGA...GGAGAATGAGCACCAGGGTTCTAGGGCTGCTGATGAGCCAGGCACGGTCAACAA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000115245.8 |
||
| CDS-3UTR CAA 90 bp | TGGCTCATCAGCAGCCCTAGAACCCTGGTGCTCATTCTCCATAGAAGGTCTGAGTTCAATGGTCAGGGCTaGTTTCATGGACAGCTCAGC | + |
|
Preference number: 5 (lower is better) Translates to: WLISSPRTLVLILHRRSEFNGQG*FHGQLS Trigger: GCTGAGCTGTCCATGAAACAAGCCCTGACCATTGAA...CTCAGACCTTCTATGGAGAATGAGCACCAGGGTTCTAGGGCTGCTGATGAGCCA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000115245.8 |
||
| CDS-3UTR CAA 90 bp | TGGCTCATCAGCAGCCCTAGAACCCTGGTGCTCATTCTCCATAGAAGGTCTGAGGACGCTGCTCTGCAGTaGTATAAACACCATTGGGCA | + |
|
Preference number: 5 (lower is better) Translates to: WLISSPRTLVLILHRRSEDAALQ*YKHHWA Trigger: TGCCCAATGGTGTTTATACAACTGCAGAGCAGCGTC...CTCAGACCTTCTATGGAGAATGAGCACCAGGGTTCTAGGGCTGCTGATGAGCCA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000115245.8 |
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| CDS TCA 90 bp | TTGAGCACCACATCTTCCCGCAGGTTTTTGATCTCCAGTCTCCTCTaGATCACCTCCTTGCGCAGTTCCTCAGTGCTTTCTTTCAGGAGC | + |
|
Preference number: 5 (lower is better) Translates to: LSTTSSRRFLISSLL*ITSLRSSSVLSFRS Trigger: GCTCCTGAAAGAAAGCACTGAGGAACTGCGCAAGGAGGTGATTCAGAGGAGACTGGAGATCAAAAACCTGCGGGAAGATGTGGTGCTCAA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000030552.7 ENSMUST00000115245.8 |
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| CDS GCA 90 bp | AAGCTCGGTATCTGCTTCAGGCATGTAGGCGTTTGGACGCTGCTCTaGAGTTGTATAAACACCATTGGGCAGCTGCCGATAATCCGTTTC | + |
|
Preference number: 5 (lower is better) Translates to: KLGICFRHVGVWTLL*SCINTIGQLPIIRF Trigger: GAAACGGATTATCGGCAGCTGCCCAATGGTGTTTATACAACTGCAGAGCAGCGTCCAAACGCCTACATGCCTGAAGCAGATACCGAGCTT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000115245.8 |
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| CDS CCA 90 bp | GCATGTAGGCGTTTGGACGCTGCTCTGCAGTTGTATAAACACCATTaGGCAGCTGCCGATAATCCGTTTCCATGTACTCCCGAGACATCT | + |
|
Preference number: 5 (lower is better) Translates to: ACRRLDAALQLYKHH*AAADNPFPCTPETS Trigger: AGATGTCTCGGGAGTACATGGAAACGGATTATCGGCAGCTGCCCAATGGTGTTTATACAACTGCAGAGCAGCGTCCAAACGCCTACATGC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000115245.8 |
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| CDS-3UTR CAA 90 bp | GCCTGGCTCATCAGCAGCCCTAGAACCCTGGTGCTCATTCTCCATAGAAGGTCTATTGTACTCCCTTTCTaGCGCTGCCGTGTATTCATT | + |
|
Preference number: 5 (lower is better) Translates to: AWLISSPRTLVLILHRRSIVLPF*RCRVFI Trigger: AATGAATACACGGCAGCGCAAGAAAGGGAGTACAAT...AGACCTTCTATGGAGAATGAGCACCAGGGTTCTAGGGCTGCTGATGAGCCAGGC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000115245.8 |
||
| CDS-3UTR CAA 90 bp | CCCATTGTTGTTGACCGTGCCTGGCTCATCAGCAGCCCTAGAACCCTGGTGCTCTCGTTCTTTCTCTCTTaGCTTACGAGAAAGTTCATC | + |
|
Preference number: 5 (lower is better) Translates to: PIVVDRAWLISSPRTLVLSFFLS*LTRKFI Trigger: GATGAACTTTCTCGTAAGCAAAGAGAGAAAGAACGA...GAGCACCAGGGTTCTAGGGCTGCTGATGAGCCAGGCACGGTCAACAACAATGGG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000115245.8 |
||
| CDS-3UTR CAA 90 bp | GTTGACCGTGCCTGGCTCATCAGCAGCCCTAGAACCCTGGTGCTCATTCTCCATTTCTGTATGCTCTCCTaGATGGTCACATTGTTGGAA | + |
|
Preference number: 5 (lower is better) Translates to: VDRAWLISSPRTLVLILHFCMLS*MVTLLE Trigger: TTCCAACAATGTGACCATCAAGGAGAGCATACAGAA...ATGGAGAATGAGCACCAGGGTTCTAGGGCTGCTGATGAGCCAGGCACGGTCAAC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000115245.8 |
||
| CDS GCA 90 bp | TCTGCCATTCTGGTTCCAGGAAGTTTTCCCTTGGAGTGCAGCTCATaGAGACAGAGGAAAGCTGGTGTTTCAGCTAAATTGATGAGCCGC | + |
|
Preference number: 5 (lower is better) Translates to: SAILVPGSFPLECSS*RQRKAGVSAKLMSR Trigger: GCGGCTCATCAATTTAGCTGAAACACCAGCTTTCCTCTGTCTGCATGAGCTGCACTCCAAGGGAAAACTTCCTGGAACCAGAATGGCAGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000030552.7 ENSMUST00000115245.8 |
||
| CDS CCA 90 bp | CTGTCCATGCTGGTCAGCTGGGCCTCCTTCTTCTCCTTCATTTCCTaGAGTTTAGCAGTGATTTTGCACACATCGTTCTGTATGCTCTCC | + |
|
Preference number: 5 (lower is better) Translates to: LSMLVSWASFFSFIS*SLAVILHTSFCMLS Trigger: GGAGAGCATACAGAACGATGTGTGCAAAATCACTGCTAAACTCCAGGAAATGAAGGAGAAGAAGGAGGCCCAGCTGACCAGCATGGACAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000115245.8 |
||
| CDS-3UTR CAA 90 bp | CCTGGCTCATCAGCAGCCCTAGAACCCTGGTGCTCATTCTCCATAGAAGGTCTGAGACAGTTCCGTAGATaGATATCCAAGATCCCTCTT | + |
|
Preference number: 5 (lower is better) Translates to: PGSSAALEPWCSFSIEGLRQFRR*ISKIPL Trigger: AAGAGGGATCTTGGATATCAATCTACGGAACTGTCT...CAGACCTTCTATGGAGAATGAGCACCAGGGTTCTAGGGCTGCTGATGAGCCAGG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000115245.8 |
||
| CDS-3UTR CAA 90 bp | ACCGTGCCTGGCTCATCAGCAGCCCTAGAACCCTGGTGCTCATTCTCCATAGAATCCTTGATGGTCACATaGTTGGAATGCTTTAGCATG | + |
|
Preference number: 5 (lower is better) Translates to: TVPGSSAALEPWCSFSIESLMVT*LECFSM Trigger: CATGCTAAAGCATTCCAACAATGTGACCATCAAGGA...TTCTATGGAGAATGAGCACCAGGGTTCTAGGGCTGCTGATGAGCCAGGCACGGT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000115245.8 |
||
| CDS TCA 90 bp | CTATTCATCTTCTTGGCTAAGAGCAGTGTGTCCTTCTTGCAAGCCTaGGTTTTGCCTTTGAGCCTGTTTGTGAGCTGGGACACCTGCTCA | + |
|
Preference number: 5 (lower is better) Translates to: LFIFLAKSSVSFLQA*VLPLSLFVSWDTCS Trigger: TGAGCAGGTGTCCCAGCTCACAAACAGGCTCAAAGGCAAAACTCAGGCTTGCAAGAAGGACACACTGCTCTTAGCCAAGAAGATGAATAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000115245.8 |
||
| CDS CCA 90 bp | CTGTATCGTGTAGCAAGGTGTACTTGGCTTTCAACTCTGCCATTCTaGTTCCAGGAAGTTTTCCCTTGGAGTGCAGCTCATGCAGACAGA | + |
|
Preference number: 5 (lower is better) Translates to: LYRVARCTWLSTLPF*FQEVFPWSAAHADR Trigger: TCTGTCTGCATGAGCTGCACTCCAAGGGAAAACTTCCTGGAACCAGAATGGCAGAGTTGAAAGCCAAGTACACCTTGCTACACGATACAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000030552.7 ENSMUST00000115245.8 |
||
| CDS TCA 90 bp | CTTCCATCTCTAGTAGAAGCCTTTGATTCATGGCTTGTGCCTGAGTaGGCGCATCCAAAGACACTTTCAGGAGCAGCTCTGTCTTCTTCA | + |
|
Preference number: 5 (lower is better) Translates to: LPSLVEAFDSWLVPE*AHPKTLSGAALSSS Trigger: TGAAGAAGACAGAGCTGCTCCTGAAAGTGTCTTTGGATGCGCTCACTCAGGCACAAGCCATGAATCAAAGGCTTCTACTAGAGATGGAAG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000115245.8 |
||
| CDS TCA 90 bp | TGCTGCTCCACTAACTTGGCCTCAGCTTCTGACAGAGATTTCTGTTaGGCCAGATTTCTCCTAGCTAGATCAACCTCTTTGTGGAGCTCT | + |
|
Preference number: 5 (lower is better) Translates to: CCSTNLASASDRDFC*ARFLLARSTSLWSS Trigger: AGAGCTCCACAAAGAGGTTGATCTAGCTAGGAGAAATCTGGCTCAACAGAAATCTCTGTCAGAAGCTGAGGCCAAGTTAGTGGAGCAGCA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000115245.8 |
||
| CDS GCA 90 bp | GCTTTCAACTCTGCCATTCTGGTTCCAGGAAGTTTTCCCTTGGAGTaGAGCTCATGCAGACAGAGGAAAGCTGGTGTTTCAGCTAAATTG | + |
|
Preference number: 5 (lower is better) Translates to: AFNSAILVPGSFPLE*SSCRQRKAGVSAKL Trigger: CAATTTAGCTGAAACACCAGCTTTCCTCTGTCTGCATGAGCTGCACTCCAAGGGAAAACTTCCTGGAACCAGAATGGCAGAGTTGAAAGC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000030552.7 ENSMUST00000115245.8 |
||
| CDS TCA 90 bp | AAAACTGAATCTGGATCACAGCCAGGTCGGCATCCAGGGACTTCTTaGTTGGCACTAGTTTCCGTGTCACAGAAATCTGCCTTTGCTTTT | + |
|
Preference number: 5 (lower is better) Translates to: KTESGSQPGRHPGTS*LALVSVSQKSAFAF Trigger: AAAAGCAAAGGCAGATTTCTGTGACACGGAAACTAGTGCCAATCAAGAAGTCCCTGGATGCCGACCTGGCTGTGATCCAGATTCAGTTTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000115245.8 |
||
| CDS CCA 90 bp | GAGGAGGCTTCGTTCTCTTTGGTTAGTTCCAATAGTTTAAGCAGTTaGCCATACTCTCGTTCTTTGACTTCTAGTAAGGTTCGCTTGCCC | + |
|
Preference number: 5 (lower is better) Translates to: EEASFSLVSSNSLSS*PYSRSLTSSKVRLP Trigger: GGGCAAGCGAACCTTACTAGAAGTCAAAGAACGAGAGTATGGCCAACTGCTTAAACTATTGGAACTAACCAAAGAGAACGAAGCCTCCTC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000030552.7 ENSMUST00000115245.8 |
||
| CDS-3UTR CAA 90 bp | GTGAATGTACAAGGAAGCCACTGCTTTGGAAACAACCCATTGTTGTTGACCGTGTATTCATTTTGGTACTaGAGCAGCTGCTCCCGAAGT | + |
|
Preference number: 5 (lower is better) Translates to: VNVQGSHCFGNNPLLLTVYSFWY*SSCSRS Trigger: ACTTCGGGAGCAGCTGCTCAAGTACCAAAATGAATA...CACGGTCAACAACAATGGGTTGTTTCCAAAGCAGTGGCTTCCTTGTACATTCAC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000115245.8 |
||
| CDS GCA 90 bp | TCCAGGGACTTCTTGATTGGCACTAGTTTCCGTGTCACAGAAATCTaGCTTTGCTTTTCGGCAATCCTCAGTTTTAGGAATCGGATTTTT | + |
|
Preference number: 5 (lower is better) Translates to: SRDFLIGTSFRVTEI*LCFSAILSFRNRIF Trigger: AAAAATCCGATTCCTAAAACTGAGGATTGCCGAAAAGCAAAGGCAGATTTCTGTGACACGGAAACTAGTGCCAATCAAGAAGTCCCTGGA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000115245.8 |
||
| CDS-3UTR CAA 90 bp | GTGAATGTACAAGGAAGCCACTGCTTTGGAAACAACCCATTGTTGTTGACCGTGAGTTTAGCAGTGATTTaGCACACATCGTTCTGTATG | + |
|
Preference number: 5 (lower is better) Translates to: VNVQGSHCFGNNPLLLTVSLAVI*HTSFCM Trigger: CATACAGAACGATGTGTGCAAAATCACTGCTAAACT...CACGGTCAACAACAATGGGTTGTTTCCAAAGCAGTGGCTTCCTTGTACATTCAC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000115245.8 |
||
| CDS TCA 90 bp | ACATTGTTGGAATGCTTTAGCATGGCGTTTTGTAGCTTTCGTTCTTaGGAGACAGCGCTGTTCCTTAAGATTTCCAGCTCATTTAATGAC | + |
|
Preference number: 5 (lower is better) Translates to: TLLECFSMAFCSFRS*ETALFLKISSSFND Trigger: GTCATTAAATGAGCTGGAAATCTTAAGGAACAGCGCTGTCTCTCAAGAACGAAAGCTACAAAACGCCATGCTAAAGCATTCCAACAATGT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000115245.8 |
||
| CDS TCA 90 bp | TTTCTAATTGTATCATACAAGCTGGCAAATTCTCTGAGTCTCCTATaGATTTCATGCTTTCTCTTCTTGTATAGCCTGATTTCAAGGTCC | + |
|
Preference number: 5 (lower is better) Translates to: FLIVSYKLANSLSLL*ISCFLFLYSLISRS Trigger: GGACCTTGAAATCAGGCTATACAAGAAGAGAAAGCATGAAATTCATAGGAGACTCAGAGAATTTGCCAGCTTGTATGATACAATTAGAAA 37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000115245.8 |
||
| CDS GCA 72 bp | GGGAAGTCTTCGGCCTGCTGCAGACAGACCTGCTGCTaGTGGATCTGCTCCGTGAAGCGCTTGGCGTTCTCC | + |
|
Preference number: 6 (lower is better) Translates to: GKSSACCRQTCC*WICSVKRLAFS Trigger: GGAGAACGCCAAGCGCTTCACGGAGCAGATCCAGCAGCAGCAGGTCTGTCTGCAGCAGGCCGAAGACTTCCC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000030552.7 ENSMUST00000115245.8 |
||
| CDS GCA 72 bp | ACGTTGGGGAAGTCTTCGGCCTGCTGCAGACAGACCTaGTGCTGCTGGATCTGCTCCGTGAAGCGCTTGGCG | + |
|
Preference number: 6 (lower is better) Translates to: TLGKSSACCRQT*CCWICSVKRLA Trigger: CGCCAAGCGCTTCACGGAGCAGATCCAGCAGCAGCAGGTCTGTCTGCAGCAGGCCGAAGACTTCCCCAACGT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000030552.7 ENSMUST00000115245.8 |
||
| CDS CAA 90 bp | TGCTGCAGACAGACCTGCTGCTGCTGGATCTGCTCCGTGAAGCGCTaGGCGTTCTCCAGTAGCTGCACCTCAGACTCCTGCGTGCTCACC | + |
|
Preference number: 6 (lower is better) Translates to: CCRQTCCCWICSVKR*AFSSSCTSDSCVLT Trigger: GGTGAGCACGCAGGAGTCTGAGGTGCAGCTACTGGAGAACGCCAAGCGCTTCACGGAGCAGATCCAGCAGCAGCAGGTCTGTCTGCAGCA 61% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000030552.7 ENSMUST00000115245.8 |
||
| CDS GCA 72 bp | TTGGGGAAGTCTTCGGCCTGCTGCAGACAGACCTGCTaGTGCTGGATCTGCTCCGTGAAGCGCTTGGCGTTC | + |
|
Preference number: 6 (lower is better) Translates to: LGKSSACCRQTC*CWICSVKRLAF Trigger: GAACGCCAAGCGCTTCACGGAGCAGATCCAGCAGCAGCAGGTCTGTCTGCAGCAGGCCGAAGACTTCCCCAA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000030552.7 ENSMUST00000115245.8 |
||
| CDS CAA 72 bp | CAGACCTGCTGCTGCTGGATCTGCTCCGTGAAGCGCTaGGCGTTCTCCAGTAGCTGCACCTCAGACTCCTGC | + |
|
Preference number: 6 (lower is better) Translates to: QTCCCWICSVKR*AFSSSCTSDSC Trigger: GCAGGAGTCTGAGGTGCAGCTACTGGAGAACGCCAAGCGCTTCACGGAGCAGATCCAGCAGCAGCAGGTCTG 61% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000030552.7 ENSMUST00000115245.8 |
||
| CDS GCA 72 bp | CGCGCCATACGGTTTGGGCAGAGGAAGCTCGGTATCTaGTTCAGGCATGTAGGCGTTTGGACGCTGCTCTGC | + |
|
Preference number: 6 (lower is better) Translates to: RAIRFGQRKLGI*FRHVGVWTLLC Trigger: GCAGAGCAGCGTCCAAACGCCTACATGCCTGAAGCAGATACCGAGCTTCCTCTGCCCAAACCGTATGGCGCG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000115245.8 |
||
| CDS CCA 72 bp | AAGTCTTCGGCCTGCTGCAGACAGACCTGCTGCTGCTaGATCTGCTCCGTGAAGCGCTTGGCGTTCTCCAGT | + |
|
Preference number: 6 (lower is better) Translates to: KSSACCRQTCCC*ICSVKRLAFSS Trigger: ACTGGAGAACGCCAAGCGCTTCACGGAGCAGATCCAGCAGCAGCAGGTCTGTCTGCAGCAGGCCGAAGACTT 60% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000030552.7 ENSMUST00000115245.8 |
||
| CDS CCA 72 bp | GTGCCTCCTGTTGGCTCCGGGTTCAGAGGGCTTAAATaGAGCCATCGCGCCATACGGTTTGGGCAGAGGAAG | + |
|
Preference number: 6 (lower is better) Translates to: VPPVGSGFRGLK*SHRAIRFGQRK Trigger: CTTCCTCTGCCCAAACCGTATGGCGCGATGGCTCCATTTAAGCCCTCTGAACCCGGAGCCAACAGGAGGCAC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000115245.8 |
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| CDS GCA 72 bp | ATCTGCTCCGTGAAGCGCTTGGCGTTCTCCAGTAGCTaGACCTCAGACTCCTGCGTGCTCACCACTGTATCG | + |
|
Preference number: 6 (lower is better) Translates to: ICSVKRLAFSSS*TSDSCVLTTVS Trigger: CGATACAGTGGTGAGCACGCAGGAGTCTGAGGTGCAGCTACTGGAGAACGCCAAGCGCTTCACGGAGCAGAT 58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000030552.7 ENSMUST00000115245.8 |
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| CDS CAA 72 bp | TGCTCCCGAAGTTTGCAGACCTCAGTGGTGAAGACGTaGGGGAAGTCTTCGGCCTGCTGCAGACAGACCTGC | + |
|
Preference number: 6 (lower is better) Translates to: CSRSLQTSVVKT*GKSSACCRQTC Trigger: GCAGGTCTGTCTGCAGCAGGCCGAAGACTTCCCCAACGTCTTCACCACTGAGGTCTGCAAACTTCGGGAGCA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000030552.7 ENSMUST00000115245.8 |
||
| CDS GCA 72 bp | CGCTTGGCGTTCTCCAGTAGCTGCACCTCAGACTCCTaGGTGCTCACCACTGTATCGTGTAGCAAGGTGTAC | + |
|
Preference number: 6 (lower is better) Translates to: RLAFSSSCTSDS*VLTTVSCSKVY Trigger: GTACACCTTGCTACACGATACAGTGGTGAGCACGCAGGAGTCTGAGGTGCAGCTACTGGAGAACGCCAAGCG 57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000030552.7 ENSMUST00000115245.8 |
||
| CDS GCA 72 bp | CGCCGCTGTACGGCCTTCTCATACTTCTTGCGCAGCTaGACCATCTCCTCTTCGATCACGGTGATCATGCTG | + |
|
Preference number: 6 (lower is better) Translates to: RRCTAFSYFLRS*TISSSITVIML Trigger: CAGCATGATCACCGTGATCGAAGAGGAGATGGTGCAGCTGCGCAAGAAGTATGAGAAGGCCGTACAGCGGCG 57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000115245.8 |
||
| CDS GCA 72 bp | TGGCGTTCTCCAGTAGCTGCACCTCAGACTCCTGCGTaGTCACCACTGTATCGTGTAGCAAGGTGTACTTGG | + |
|
Preference number: 6 (lower is better) Translates to: WRSPVAAPQTPA*SPLYRVARCTW Trigger: CCAAGTACACCTTGCTACACGATACAGTGGTGAGCACGCAGGAGTCTGAGGTGCAGCTACTGGAGAACGCCA 56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000030552.7 ENSMUST00000115245.8 |
||
| CDS CAA 72 bp | CTTTCATTCCGCCGCTGTACGGCCTTCTCATACTTCTaGCGCAGCTGCACCATCTCCTCTTCGATCACGGTG | + |
|
Preference number: 6 (lower is better) Translates to: LSFRRCTAFSYF*RSCTISSSITV Trigger: CACCGTGATCGAAGAGGAGATGGTGCAGCTGCGCAAGAAGTATGAGAAGGCCGTACAGCGGCGGAATGAAAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000115245.8 |
||
| CDS CAA 72 bp | TCAGAGGGCTTAAATGGAGCCATCGCGCCATACGGTTaGGGCAGAGGAAGCTCGGTATCTGCTTCAGGCATG | + |
|
Preference number: 6 (lower is better) Translates to: SEGLNGAIAPYG*GRGSSVSASGM Trigger: CATGCCTGAAGCAGATACCGAGCTTCCTCTGCCCAAACCGTATGGCGCGATGGCTCCATTTAAGCCCTCTGA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000115245.8 |
||
| CDS CAA 90 bp | GCTGCCGTGTATTCATTTTGGTACTTGAGCAGCTGCTCCCGAAGTTaGCAGACCTCAGTGGTGAAGACGTTGGGGAAGTCTTCGGCCTGC | + |
|
Preference number: 6 (lower is better) Translates to: AAVYSFWYLSSCSRS*QTSVVKTLGKSSAC Trigger: GCAGGCCGAAGACTTCCCCAACGTCTTCACCACTGAGGTCTGCAAACTTCGGGAGCAGCTGCTCAAGTACCAAAATGAATACACGGCAGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000030552.7 ENSMUST00000115245.8 |
||
| CDS CAA 90 bp | GTTTGGGCAGAGGAAGCTCGGTATCTGCTTCAGGCATGTAGGCGTTaGGACGCTGCTCTGCAGTTGTATAAACACCATTGGGCAGCTGCC | + |
|
Preference number: 6 (lower is better) Translates to: VWAEEARYLLQACRR*DAALQLYKHHWAAA Trigger: GGCAGCTGCCCAATGGTGTTTATACAACTGCAGAGCAGCGTCCAAACGCCTACATGCCTGAAGCAGATACCGAGCTTCCTCTGCCCAAAC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000115245.8 |
||
| CDS GCA 72 bp | TCCTCCAGCTCCTTCTGCTCCCTCACTAGCTGCTTCTaGTTGAGCACCACATCTTCCCGCAGGTTTTTGATC | + |
|
Preference number: 6 (lower is better) Translates to: SSSSFCSLTSCF*LSTTSSRRFLI Trigger: GATCAAAAACCTGCGGGAAGATGTGGTGCTCAAGCAGAAGCAGCTAGTGAGGGAGCAGAAGGAGCTGGAGGA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000030552.7 ENSMUST00000115245.8 |
||
| CDS TCA 72 bp | CCCTTTCTTGCGCTGCCGTGTATTCATTTTGGTACTTaGGCAGCTGCTCCCGAAGTTTGCAGACCTCAGTGG | + |
|
Preference number: 6 (lower is better) Translates to: PFLALPCIHFGT*AAAPEVCRPQW Trigger: CCACTGAGGTCTGCAAACTTCGGGAGCAGCTGCTCAAGTACCAAAATGAATACACGGCAGCGCAAGAAAGGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000030552.7 ENSMUST00000115245.8 |
||
| CDS CAA 72 bp | CTTCAGGCATGTAGGCGTTTGGACGCTGCTCTGCAGTaGTATAAACACCATTGGGCAGCTGCCGATAATCCG | + |
|
Preference number: 6 (lower is better) Translates to: LQACRRLDAALQ*YKHHWAAADNP Trigger: CGGATTATCGGCAGCTGCCCAATGGTGTTTATACAACTGCAGAGCAGCGTCCAAACGCCTACATGCCTGAAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000115245.8 |
||
| CDS CAA 90 bp | TCTTCATCTCGAAGCACCTTCAGCCAGTCCTTCTCAATCTCTCTGTaGAGCGGGAGGCCCTTTTCTATCCTGGCACTGCAGGAGAAGATG | + |
|
Preference number: 6 (lower is better) Translates to: SSSRSTFSQSFSISL*SGRPFSILALQEKM Trigger: CATCTTCTCCTGCAGTGCCAGGATAGAAAAGGGCCTCCCGCTCAACAGAGAGATTGAGAAGGACTGGCTGAAGGTGCTTCGAGATGAAGA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000115245.8 |
||
| CDS CAA 90 bp | CGGTATCTGCTTCAGGCATGTAGGCGTTTGGACGCTGCTCTGCAGTaGTATAAACACCATTGGGCAGCTGCCGATAATCCGTTTCCATGT | + |
|
Preference number: 6 (lower is better) Translates to: RYLLQACRRLDAALQ*YKHHWAAADNPFPC Trigger: ACATGGAAACGGATTATCGGCAGCTGCCCAATGGTGTTTATACAACTGCAGAGCAGCGTCCAAACGCCTACATGCCTGAAGCAGATACCG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000115245.8 |
||
| CDS GCA 72 bp | ATCTGCTTCAGGCATGTAGGCGTTTGGACGCTGCTCTaGAGTTGTATAAACACCATTGGGCAGCTGCCGATA | + |
|
Preference number: 6 (lower is better) Translates to: ICFRHVGVWTLL*SCINTIGQLPI Trigger: TATCGGCAGCTGCCCAATGGTGTTTATACAACTGCAGAGCAGCGTCCAAACGCCTACATGCCTGAAGCAGAT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000115245.8 |
||
| CDS CCA 72 bp | CGTTTGGACGCTGCTCTGCAGTTGTATAAACACCATTaGGCAGCTGCCGATAATCCGTTTCCATGTACTCCC | + |
|
Preference number: 6 (lower is better) Translates to: RLDAALQLYKHH*AAADNPFPCTP Trigger: GGGAGTACATGGAAACGGATTATCGGCAGCTGCCCAATGGTGTTTATACAACTGCAGAGCAGCGTCCAAACG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000115245.8 |
||
| CDS CCA 72 bp | AGGAAGCTCGGTATCTGCTTCAGGCATGTAGGCGTTTaGACGCTGCTCTGCAGTTGTATAAACACCATTGGG | + |
|
Preference number: 6 (lower is better) Translates to: RKLGICFRHVGV*TLLCSCINTIG Trigger: CCCAATGGTGTTTATACAACTGCAGAGCAGCGTCCAAACGCCTACATGCCTGAAGCAGATACCGAGCTTCCT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000115245.8 |
||
| CDS CAA 72 bp | TCCCTTTCTTGCGCTGCCGTGTATTCATTTTGGTACTaGAGCAGCTGCTCCCGAAGTTTGCAGACCTCAGTG | + |
|
Preference number: 6 (lower is better) Translates to: SLSCAAVYSFWY*SSCSRSLQTSV Trigger: CACTGAGGTCTGCAAACTTCGGGAGCAGCTGCTCAAGTACCAAAATGAATACACGGCAGCGCAAGAAAGGGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000030552.7 ENSMUST00000115245.8 |
||
| CDS CAA 72 bp | ATCTGGATCACAGCCAGGTCGGCATCCAGGGACTTCTaGATTGGCACTAGTTTCCGTGTCACAGAAATCTGC | + |
|
Preference number: 6 (lower is better) Translates to: IWITARSASRDF*IGTSFRVTEIC Trigger: GCAGATTTCTGTGACACGGAAACTAGTGCCAATCAAGAAGTCCCTGGATGCCGACCTGGCTGTGATCCAGAT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000115245.8 |
||
| CDS CAA 72 bp | GAGGAAGCTCGGTATCTGCTTCAGGCATGTAGGCGTTaGGACGCTGCTCTGCAGTTGTATAAACACCATTGG | + |
|
Preference number: 6 (lower is better) Translates to: EEARYLLQACRR*DAALQLYKHHW Trigger: CCAATGGTGTTTATACAACTGCAGAGCAGCGTCCAAACGCCTACATGCCTGAAGCAGATACCGAGCTTCCTC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000115245.8 |
||
| CDS CAA 72 bp | ATGGGCTTTACAACAGGTTTCCTAATGTGCCTCCTGTaGGCTCCGGGTTCAGAGGGCTTAAATGGAGCCATC | + |
|
Preference number: 6 (lower is better) Translates to: MGFTTGFLMCLL*APGSEGLNGAI Trigger: GATGGCTCCATTTAAGCCCTCTGAACCCGGAGCCAACAGGAGGCACATTAGGAAACCTGTTGTAAAGCCCAT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000115245.8 |
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| CDS TCA 72 bp | ACATCTTCCCGCAGGTTTTTGATCTCCAGTCTCCTCTaGATCACCTCCTTGCGCAGTTCCTCAGTGCTTTCT | + |
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Preference number: 6 (lower is better) Translates to: TSSRRFLISSLL*ITSLRSSSVLS Trigger: AGAAAGCACTGAGGAACTGCGCAAGGAGGTGATTCAGAGGAGACTGGAGATCAAAAACCTGCGGGAAGATGT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000030552.7 ENSMUST00000115245.8 |
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| CDS TCA 72 bp | TTCTTGGCTAAGAGCAGTGTGTCCTTCTTGCAAGCCTaGGTTTTGCCTTTGAGCCTGTTTGTGAGCTGGGAC | + |
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Preference number: 6 (lower is better) Translates to: FLAKSSVSFLQA*VLPLSLFVSWD Trigger: GTCCCAGCTCACAAACAGGCTCAAAGGCAAAACTCAGGCTTGCAAGAAGGACACACTGCTCTTAGCCAAGAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000115245.8 |
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| CDS GCA 72 bp | TCTGCCATTCTGGTTCCAGGAAGTTTTCCCTTGGAGTaGAGCTCATGCAGACAGAGGAAAGCTGGTGTTTCA | + |
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Preference number: 6 (lower is better) Translates to: SAILVPGSFPLE*SSCRQRKAGVS Trigger: TGAAACACCAGCTTTCCTCTGTCTGCATGAGCTGCACTCCAAGGGAAAACTTCCTGGAACCAGAATGGCAGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000030552.7 ENSMUST00000115245.8 |
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| CDS CAA 72 bp | TTCAACTCTGCCATTCTGGTTCCAGGAAGTTTTCCCTaGGAGTGCAGCTCATGCAGACAGAGGAAAGCTGGT | + |
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Preference number: 6 (lower is better) Translates to: FNSAILVPGSFP*ECSSCRQRKAG Trigger: ACCAGCTTTCCTCTGTCTGCATGAGCTGCACTCCAAGGGAAAACTTCCTGGAACCAGAATGGCAGAGTTGAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000030552.7 ENSMUST00000115245.8 |
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| CDS CAA 72 bp | GTCAGATCTTTCCCTTTAATGAAGCGGACCCTGCCCTaGCTGTCAGGGTTCACAAAGAGTTTCTCCAGGTCT | + |
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Preference number: 6 (lower is better) Translates to: VRSFPLMKRTLP*LSGFTKSFSRS Trigger: AGACCTGGAGAAACTCTTTGTGAACCCTGACAGCAAGGGCAGGGTCCGCTTCATTAAAGGGAAAGATCTGAC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000115245.8 |
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| CDS CAA 90 bp | ATATTGTACTCCCTTTCTTGCGCTGCCGTGTATTCATTTTGGTACTaGAGCAGCTGCTCCCGAAGTTTGCAGACCTCAGTGGTGAAGACG | + |
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Preference number: 6 (lower is better) Translates to: ILYSLSCAAVYSFWY*SSCSRSLQTSVVKT Trigger: CGTCTTCACCACTGAGGTCTGCAAACTTCGGGAGCAGCTGCTCAAGTACCAAAATGAATACACGGCAGCGCAAGAAAGGGAGTACAATAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000030552.7 ENSMUST00000115245.8 |
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| CDS CAA 90 bp | AGGTTGAACACCAGCTCCCGCAAACTTTCTTGCTCCTTTAGAAGTTaGTTCTCCTGTGCAATCTGCTGCTCCACTAACTTGGCCTCAGCT | + |
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Preference number: 6 (lower is better) Translates to: RLNTSSRKLSCSFRS*FSCAICCSTNLASA Trigger: AGCTGAGGCCAAGTTAGTGGAGCAGCAGATTGCACAGGAGAACAAACTTCTAAAGGAGCAAGAAAGTTTGCGGGAGCTGGTGTTCAACCT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000115245.8 |
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| CDS GCA 72 bp | CTGGTTCCAGGAAGTTTTCCCTTGGAGTGCAGCTCATaGAGACAGAGGAAAGCTGGTGTTTCAGCTAAATTG | + |
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Preference number: 6 (lower is better) Translates to: LVPGSFPLECSS*RQRKAGVSAKL Trigger: CAATTTAGCTGAAACACCAGCTTTCCTCTGTCTGCATGAGCTGCACTCCAAGGGAAAACTTCCTGGAACCAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000030552.7 ENSMUST00000115245.8 |
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| CDS CCA 72 bp | GTAGCAAGGTGTACTTGGCTTTCAACTCTGCCATTCTaGTTCCAGGAAGTTTTCCCTTGGAGTGCAGCTCAT | + |
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Preference number: 6 (lower is better) Translates to: VARCTWLSTLPF*FQEVFPWSAAH Trigger: ATGAGCTGCACTCCAAGGGAAAACTTCCTGGAACCAGAATGGCAGAGTTGAAAGCCAAGTACACCTTGCTAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000030552.7 ENSMUST00000115245.8 |
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| CDS CCA 72 bp | GTTTGTTCTCCTGTGCAATCTGCTGCTCCACTAACTTaGCCTCAGCTTCTGACAGAGATTTCTGTTGAGCCA | + |
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Preference number: 6 (lower is better) Translates to: VCSPVQSAAPLT*PQLLTEISVEP Trigger: TGGCTCAACAGAAATCTCTGTCAGAAGCTGAGGCCAAGTTAGTGGAGCAGCAGATTGCACAGGAGAACAAAC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000115245.8 |
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| CDS CAA 72 bp | TCATGCAGACAGAGGAAAGCTGGTGTTTCAGCTAAATaGATGAGCCGCTCCTCCCGAATGTTAACTGTAGGC | + |
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Preference number: 6 (lower is better) Translates to: SCRQRKAGVSAK*MSRSSRMLTVG Trigger: GCCTACAGTTAACATTCGGGAGGAGCGGCTCATCAATTTAGCTGAAACACCAGCTTTCCTCTGTCTGCATGA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000030552.7 ENSMUST00000115245.8 |
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| CDS CAA 72 bp | TATTCATTTTGGTACTTGAGCAGCTGCTCCCGAAGTTaGCAGACCTCAGTGGTGAAGACGTTGGGGAAGTCT | + |
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Preference number: 6 (lower is better) Translates to: YSFWYLSSCSRS*QTSVVKTLGKS Trigger: AGACTTCCCCAACGTCTTCACCACTGAGGTCTGCAAACTTCGGGAGCAGCTGCTCAAGTACCAAAATGAATA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000030552.7 ENSMUST00000115245.8 |
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| CDS CAA 72 bp | ATTGTACTCCCTTTCTTGCGCTGCCGTGTATTCATTTaGGTACTTGAGCAGCTGCTCCCGAAGTTTGCAGAC | + |
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Preference number: 6 (lower is better) Translates to: IVLPFLRCRVFI*VLEQLLPKFAD Trigger: GTCTGCAAACTTCGGGAGCAGCTGCTCAAGTACCAAAATGAATACACGGCAGCGCAAGAAAGGGAGTACAAT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000030552.7 ENSMUST00000115245.8 |
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| CDS CAA 72 bp | CTCTCTCACCTCCTTTTGGAGTTCAATGGTCAGGGCTaGTTTCATGGACAGCTCAGCAACAAGAGCCATCAT | + |
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Preference number: 6 (lower is better) Translates to: LSHLLLEFNGQG*FHGQLSNKSHH Trigger: ATGATGGCTCTTGTTGCTGAGCTGTCCATGAAACAAGCCCTGACCATTGAACTCCAAAAGGAGGTGAGAGAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000115245.8 |
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| CDS CAA 90 bp | GTACTGAATATTGTACTCCCTTTCTTGCGCTGCCGTGTATTCATTTaGGTACTTGAGCAGCTGCTCCCGAAGTTTGCAGACCTCAGTGGT | + |
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Preference number: 6 (lower is better) Translates to: VLNIVLPFLRCRVFI*VLEQLLPKFADLSG Trigger: ACCACTGAGGTCTGCAAACTTCGGGAGCAGCTGCTCAAGTACCAAAATGAATACACGGCAGCGCAAGAAAGGGAGTACAATATTCAGTAC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000030552.7 ENSMUST00000115245.8 |
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| CDS CAA 90 bp | TCTTCTTCAGTCAGATCTTTCCCTTTAATGAAGCGGACCCTGCCCTaGCTGTCAGGGTTCACAAAGAGTTTCTCCAGGTCTTTTATCCTG | + |
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Preference number: 6 (lower is better) Translates to: SSSVRSFPLMKRTLP*LSGFTKSFSRSFIL Trigger: CAGGATAAAAGACCTGGAGAAACTCTTTGTGAACCCTGACAGCAAGGGCAGGGTCCGCTTCATTAAAGGGAAAGATCTGACTGAAGAAGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000115245.8 |
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| CDS GCA 72 bp | CAGCCTGTACTGAATATTGTACTCCCTTTCTTGCGCTaGCGTGTATTCATTTTGGTACTTGAGCAGCTGCTC | + |
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Preference number: 6 (lower is better) Translates to: QPVLNIVLPFLR*RVFILVLEQLL Trigger: GAGCAGCTGCTCAAGTACCAAAATGAATACACGGCAGCGCAAGAAAGGGAGTACAATATTCAGTACAGGCTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000030552.7 ENSMUST00000115245.8 |
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| CDS GCA 72 bp | TGCTCCTTTAGAAGTTTGTTCTCCTGTGCAATCTGCTaGTCCACTAACTTGGCCTCAGCTTCTGACAGAGAT | + |
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Preference number: 6 (lower is better) Translates to: CSFRSLFSCAIC*STNLASASDRD Trigger: ATCTCTGTCAGAAGCTGAGGCCAAGTTAGTGGAGCAGCAGATTGCACAGGAGAACAAACTTCTAAAGGAGCA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000115245.8 |
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| CDS CCA 72 bp | TTAACTGTAGGCACTAAGACAGAAGGGAGGTCTTCTTaGTCATCGTCTGTTTCTGAGGTTGCTGTTACCTCC | + |
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Preference number: 6 (lower is better) Translates to: LTVGTKTEGRSS*SSSVSEVAVTS Trigger: GGAGGTAACAGCAACCTCAGAAACAGACGATGACCAAGAAGACCTCCCTTCTGTCTTAGTGCCTACAGTTAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000030552.7 ENSMUST00000115245.8 |
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| CDS CAA 90 bp | AGCAGTTGGCCATACTCTCGTTCTTTGACTTCTAGTAAGGTTCGCTaGCCCTCAACTTCCTTCATTATGTCATCCCTTTCTTCCGCAAGA | + |
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Preference number: 6 (lower is better) Translates to: SSWPYSRSLTSSKVR*PSTSFIMSSLSSAR Trigger: TCTTGCGGAAGAAAGGGATGACATAATGAAGGAAGTTGAGGGCAAGCGAACCTTACTAGAAGTCAAAGAACGAGAGTATGGCCAACTGCT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000030552.7 ENSMUST00000115245.8 |
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| CDS TCA 72 bp | ACTAACTTGGCCTCAGCTTCTGACAGAGATTTCTGTTaGGCCAGATTTCTCCTAGCTAGATCAACCTCTTTG | + |
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Preference number: 6 (lower is better) Translates to: TNLASASDRDFC*ARFLLARSTSL Trigger: CAAAGAGGTTGATCTAGCTAGGAGAAATCTGGCTCAACAGAAATCTCTGTCAGAAGCTGAGGCCAAGTTAGT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000115245.8 |
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| CDS TCA 72 bp | GAATGCTTTAGCATGGCGTTTTGTAGCTTTCGTTCTTaGGAGACAGCGCTGTTCCTTAAGATTTCCAGCTCA | + |
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Preference number: 6 (lower is better) Translates to: ECFSMAFCSFRS*ETALFLKISSS Trigger: TGAGCTGGAAATCTTAAGGAACAGCGCTGTCTCTCAAGAACGAAAGCTACAAAACGCCATGCTAAAGCATTC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000115245.8 |
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| CDS CCA 72 bp | GAGAAGATGAATTCTTCTTTCTCTCTCACCTCCTTTTaGAGTTCAATGGTCAGGGCTTGTTTCATGGACAGC | + |
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Preference number: 6 (lower is better) Translates to: EKMNSSFSLTSF*SSMVRACFMDS Trigger: GCTGTCCATGAAACAAGCCCTGACCATTGAACTCCAAAAGGAGGTGAGAGAGAAAGAAGAATTCATCTTCTC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000115245.8 |
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| CDS GCA 72 bp | ATTGGCACTAGTTTCCGTGTCACAGAAATCTGCCTTTaGTTTTCGGCAATCCTCAGTTTTAGGAATCGGATT | + |
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Preference number: 6 (lower is better) Translates to: IGTSFRVTEICL*FSAILSFRNRI Trigger: AATCCGATTCCTAAAACTGAGGATTGCCGAAAAGCAAAGGCAGATTTCTGTGACACGGAAACTAGTGCCAAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000115245.8 |
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| CDS CAA 72 bp | CCATACTCTCGTTCTTTGACTTCTAGTAAGGTTCGCTaGCCCTCAACTTCCTTCATTATGTCATCCCTTTCT | + |
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Preference number: 6 (lower is better) Translates to: PYSRSLTSSKVR*PSTSFIMSSLS Trigger: AGAAAGGGATGACATAATGAAGGAAGTTGAGGGCAAGCGAACCTTACTAGAAGTCAAAGAACGAGAGTATGG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000030552.7 ENSMUST00000115245.8 |
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| CDS CAA 72 bp | ACATCGTTCTGTATGCTCTCCTTGATGGTCACATTGTaGGAATGCTTTAGCATGGCGTTTTGTAGCTTTCGT | + |
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Preference number: 6 (lower is better) Translates to: TSFCMLSLMVTL*ECFSMAFCSFR Trigger: ACGAAAGCTACAAAACGCCATGCTAAAGCATTCCAACAATGTGACCATCAAGGAGAGCATACAGAACGATGT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000115245.8 |
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| CDS CAA 72 bp | CACACATCGTTCTGTATGCTCTCCTTGATGGTCACATaGTTGGAATGCTTTAGCATGGCGTTTTGTAGCTTT | + |
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Preference number: 6 (lower is better) Translates to: HTSFCMLSLMVT*LECFSMAFCSF Trigger: AAAGCTACAAAACGCCATGCTAAAGCATTCCAACAATGTGACCATCAAGGAGAGCATACAGAACGATGTGTG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000115245.8 |
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| CDS CAA 90 bp | CAGCTCTGTCTTCTTCAGATTCCGAAAATCTCGTTCTTTCTCTCTTaGCTTACGAGAAAGTTCATCATGGTAGTTCTGCTTGTCGATGAG | + |
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Preference number: 6 (lower is better) Translates to: QLCLLQIPKISFFLS*LTRKFIMVVLLVDE Trigger: CTCATCGACAAGCAGAACTACCATGATGAACTTTCTCGTAAGCAAAGAGAGAAAGAACGAGATTTTCGGAATCTGAAGAAGACAGAGCTG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000115245.8 |
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| CDS CAA 90 bp | TTGGTTAGTTCCAATAGTTTAAGCAGTTGGCCATACTCTCGTTCTTaGACTTCTAGTAAGGTTCGCTTGCCCTCAACTTCCTTCATTATG | + |
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Preference number: 6 (lower is better) Translates to: LVSSNSLSSWPYSRS*TSSKVRLPSTSFIM Trigger: CATAATGAAGGAAGTTGAGGGCAAGCGAACCTTACTAGAAGTCAAAGAACGAGAGTATGGCCAACTGCTTAAACTATTGGAACTAACCAA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000030552.7 ENSMUST00000115245.8 |
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| CDS CAA 90 bp | TCATGCTTTCTCTTCTTGTATAGCCTGATTTCAAGGTCCTTTGATTaGATTTCCTTAACAATCTCACTATATCTTCGCTGGGCTTTCAGG | + |
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Preference number: 6 (lower is better) Translates to: SCFLFLYSLISRSFD*ISLTISLYLRWAFR Trigger: CCTGAAAGCCCAGCGAAGATATAGTGAGATTGTTAAGGAAATCAAATCAAAGGACCTTGAAATCAGGCTATACAAGAAGAGAAAGCATGA 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000115245.8 |
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| CDS CCA 72 bp | TCGTTCTCTTTGGTTAGTTCCAATAGTTTAAGCAGTTaGCCATACTCTCGTTCTTTGACTTCTAGTAAGGTT | + |
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Preference number: 6 (lower is better) Translates to: SFSLVSSNSLSS*PYSRSLTSSKV Trigger: AACCTTACTAGAAGTCAAAGAACGAGAGTATGGCCAACTGCTTAAACTATTGGAACTAACCAAAGAGAACGA 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000030552.7 ENSMUST00000115245.8 |
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| CDS CAA 72 bp | CTTCTTCAGATTCCGAAAATCTCGTTCTTTCTCTCTTaGCTTACGAGAAAGTTCATCATGGTAGTTCTGCTT | + |
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Preference number: 6 (lower is better) Translates to: LLQIPKISFFLS*LTRKFIMVVLL Trigger: AAGCAGAACTACCATGATGAACTTTCTCGTAAGCAAAGAGAGAAAGAACGAGATTTTCGGAATCTGAAGAAG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000115245.8 |
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| CDS TCA 72 bp | GTATCATACAAGCTGGCAAATTCTCTGAGTCTCCTATaGATTTCATGCTTTCTCTTCTTGTATAGCCTGATT | + |
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Preference number: 6 (lower is better) Translates to: VSYKLANSLSLL*ISCFLFLYSLI Trigger: AATCAGGCTATACAAGAAGAGAAAGCATGAAATTCATAGGAGACTCAGAGAATTTGCCAGCTTGTATGATAC 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000115245.8 |
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| CDS CAA 72 bp | TCCTTCATTATGTCATCCCTTTCTTCCGCAAGAGTGTaGACTTTGTTTTCAAGCTTCTTTAAAGAGTCACTT | + |
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Preference number: 6 (lower is better) Translates to: SFIMSSLSSARV*TLFSSFFKESL Trigger: AAGTGACTCTTTAAAGAAGCTTGAAAACAAAGTCAACACTCTTGCGGAAGAAAGGGATGACATAATGAAGGA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000030552.7 ENSMUST00000115245.8 |
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| CDS CAA 72 bp | CTCTTCTTGTATAGCCTGATTTCAAGGTCCTTTGATTaGATTTCCTTAACAATCTCACTATATCTTCGCTGG | + |
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Preference number: 6 (lower is better) Translates to: LFLYSLISRSFD*ISLTISLYLRW Trigger: CCAGCGAAGATATAGTGAGATTGTTAAGGAAATCAAATCAAAGGACCTTGAAATCAGGCTATACAAGAAGAG 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000115245.8 |
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