Pregenerated sensors for CCDC144B (Mus musculus)
Ensembl gene IDs: ENSMUSG00000047696Ensembl transcript IDs: ENSMUST00000166644.8, ENSMUST00000196964.2, ENSMUST00000200469.5
Found 143 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | GAGGAATATGCGTGTGCTCACACAGTAGCAGGCACTGGCAGAGCTTaGAGTACTAGAGCCCCTGGAGCTGGACTTGCAGGGGTTGAGCTG | + |
|
Preference number: 1 (lower is better) Translates to: EEYACAHTVAGTGRA*STRAPGAGLAGVEL Trigger: CAGCTCAACCCCTGCAAGTCCAGCTCCAGGGGCTCTAGTACTTCAAGCTCTGCCAGTGCCTGCTACTGTGTGAGCACACGCATATTCCTC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000196964.2 |
||
| 3UTR GCA 90 bp | GACCAAGGGCGTTCCTTCCCCTTGGTGTCAGACAAGGCCATCCTCTaGTACATATGCAGCTGGAGCCATGGGTCCCTCCATGTGTACTCT | + |
|
Preference number: 1 (lower is better) Translates to: DQGRSFPLVSDKAIL*YICSWSHGSLHVYS Trigger: AGAGTACACATGGAGGGACCCATGGCTCCAGCTGCATATGTAGCAGAGGATGGCCTTGTCTGACACCAAGGGGAAGGAACGCCCTTGGTC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000196964.2 |
||
| 3UTR GCA 90 bp | CGTTCCTTCCCCTTGGTGTCAGACAAGGCCATCCTCTGCTACATATaGAGCTGGAGCCATGGGTCCCTCCATGTGTACTCTTTGGTTGGT | + |
|
Preference number: 1 (lower is better) Translates to: RSFPLVSDKAILCYI*SWSHGSLHVYSLVG Trigger: ACCAACCAAAGAGTACACATGGAGGGACCCATGGCTCCAGCTGCATATGTAGCAGAGGATGGCCTTGTCTGACACCAAGGGGAAGGAACG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000196964.2 |
||
| 3UTR CCA 90 bp | GGACAAGTGGGCTCCAGGGCAGGCCTTGTGTCCACCATGCTGTATTaGGAAGCTCGGTACTGTTTTCTCTCCAGGAGAAGTTTGGTTTTG | + |
|
Preference number: 1 (lower is better) Translates to: GQVGSRAGLVSTMLY*EARYCFLSRRSLVL Trigger: CAAAACCAAACTTCTCCTGGAGAGAAAACAGTACCGAGCTTCCCAATACAGCATGGTGGACACAAGGCCTGCCCTGGAGCCCACTTGTCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000196964.2 |
||
| 3UTR CCA 90 bp | GAGGAGAAGTTCTACGGAGTCCAGATTCAGATTCATCAGGAACTGTaGACCTGGGCTCGTCTCAGCATCCATCAGAGAAGCTTCTTTCTG | + |
|
Preference number: 1 (lower is better) Translates to: EEKFYGVQIQIHQEL*TWARLSIHQRSFFL Trigger: CAGAAAGAAGCTTCTCTGATGGATGCTGAGACGAGCCCAGGTCCACAGTTCCTGATGAATCTGAATCTGGACTCCGTAGAACTTCTCCTC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000200469.5 |
||
| 3UTR TCA 90 bp | CATTGCAGAAGGGGCATAAAGAATGTAAAAGCAAGAGGAGGTGAGTaGATACAAAGAATCAGGGTTTCCCAGGCAAAGCAACCAGCTGCA | + |
|
Preference number: 1 (lower is better) Translates to: HCRRGIKNVKARGGE*IQRIRVSQAKQPAA Trigger: TGCAGCTGGTTGCTTTGCCTGGGAAACCCTGATTCTTTGTATTCACTCACCTCCTCTTGCTTTTACATTCTTTATGCCCCTTCTGCAATG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000196964.2 |
||
| 3UTR TCA 90 bp | GGATCATTGCAGAAGGGGCATAAAGAATGTAAAAGCAAGAGGAGGTaGGTGAATACAAAGAATCAGGGTTTCCCAGGCAAAGCAACCAGC | + |
|
Preference number: 1 (lower is better) Translates to: GSLQKGHKECKSKRR*VNTKNQGFPGKATS Trigger: GCTGGTTGCTTTGCCTGGGAAACCCTGATTCTTTGTATTCACTCACCTCCTCTTGCTTTTACATTCTTTATGCCCCTTCTGCAATGATCC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000196964.2 |
||
| 3UTR TCA 90 bp | ATCTTAGAGAATTCAGACTCCAGGTCCTTTATTCTGAGCTCCATCTaGGTTCGCACTGAAGCGTTCTGTTTCTGTCTTAACTTCTCTAGC | + |
|
Preference number: 1 (lower is better) Translates to: ILENSDSRSFILSSI*VRTEAFCFCLNFSS Trigger: GCTAGAGAAGTTAAGACAGAAACAGAACGCTTCAGTGCGAACTCAGATGGAGCTCAGAATAAAGGACCTGGAGTCTGAATTCTCTAAGAT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000196964.2 |
||
| 3UTR GCA 90 bp | ATAAAACTAACCTTGGTCTTGCAATTTTCCATGGTCTCAATTGAGTaGCAGAGGTCTGACTTAGGAAGCATGATTTCGCCTGAGAAACTT | + |
|
Preference number: 1 (lower is better) Translates to: IKLTLVLQFSMVSIE*QRSDLGSMISPEKL Trigger: AAGTTTCTCAGGCGAAATCATGCTTCCTAAGTCAGACCTCTGGCACTCAATTGAGACCATGGAAAATTGCAAGACCAAGGTTAGTTTTAT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000196964.2 |
||
| 3UTR TCA 90 bp | TGTCCTGCCAATGAATTGTGGCCTCAGATCAACATTATTCCATGGTaGTACTCACACAATCTGATAAGTCACAAAATAATAGCAACTCAA | + |
|
Preference number: 1 (lower is better) Translates to: CPANELWPQINIIPW*YSHNLISHKIIATQ Trigger: TTGAGTTGCTATTATTTTGTGACTTATCAGATTGTGTGAGTATCACCATGGAATAATGTTGATCTGAGGCCACAATTCATTGGCAGGACA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000196964.2 |
||
| 3UTR-3UTR TCA 90 bp | AATTCCACAGGACCAAGGGCGTTCCTTCCCCTTGGTGTCAGACAAGGCCATCCTGGTGGGCCAGCTCTCTaGCTGGGCATCAGCACCAGC | + |
|
Preference number: 2 (lower is better) Translates to: NSTGPRAFLPLGVRQGHPGGPAL*LGISTS Trigger: GCTGGTGCTGATGCCCAGTCAGAGAGCTGGCCCACC...AGGATGGCCTTGTCTGACACCAAGGGGAAGGAACGCCCTTGGTCCTGTGGAATT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000196964.2 |
||
| 3UTR-3UTR GCA 90 bp | CATCCCCCTACACGGAGCCATCAGAATTCCACAGGACCAAGGGCGTTCCTTCCCTTGCAGGGGTTGAGCTaGCTGATGTGGACGCTGGGA | + |
|
Preference number: 2 (lower is better) Translates to: HPPTRSHQNSTGPRAFLPLQGLS*LMWTLG Trigger: TCCCAGCGTCCACATCAGGCAGCTCAACCCCTGCAA...GGGAAGGAACGCCCTTGGTCCTGTGGAATTCTGATGGCTCCGTGTAGGGGGATG 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000196964.2 |
||
| 3UTR-3UTR CCA 90 bp | CTGACAGTGACCACGACAGCCACAGGATCCAGGTATAAGCTCAAGCCAGAAGAATGCACTCTTAGAAACTaGGGCCACCTCTCCAGCCCC | + |
|
Preference number: 2 (lower is better) Translates to: LTVTTTATGSRYKLKPEECTLRN*GHLSSP Trigger: GGGGCTGGAGAGGTGGCCCCAGTTTCTAAGAGTGCA...TTCTTCTGGCTTGAGCTTATACCTGGATCCTGTGGCTGTCGTGGTCACTGTCAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000196964.2 |
||
| 3UTR-3UTR TCA 90 bp | AATTCCACAGGACCAAGGGCGTTCCTTCCCCTTGGTGTCAGACAAGGCCATCCTGTGTGTGTGTGGTGCTaGAGCTCAAACACATGTGCT | + |
|
Preference number: 2 (lower is better) Translates to: NSTGPRAFLPLGVRQGHPVCVWC*SSNTCA Trigger: AGCACATGTGTTTGAGCTTCAGCACCACACACACAC...AGGATGGCCTTGTCTGACACCAAGGGGAAGGAACGCCCTTGGTCCTGTGGAATT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000196964.2 |
||
| 3UTR-3UTR GCA 90 bp | CATCCCCCTACACGGAGCCATCAGAATTCCACAGGACCAAGGGCGTTCCTTCCCACTGTGGTTTTGTCCTaGCTGGAAGACTCTGTTTCA | + |
|
Preference number: 2 (lower is better) Translates to: HPPTRSHQNSTGPRAFLPTVVLS*LEDSVS Trigger: TGAAACAGAGTCTTCCAGGCAGGACAAAACCACAGT...GGGAAGGAACGCCCTTGGTCCTGTGGAATTCTGATGGCTCCGTGTAGGGGGATG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000196964.2 |
||
| 3UTR-3UTR CCA 90 bp | AATTCCACAGGACCAAGGGCGTTCCTTCCCCTTGGTGTCAGACAAGGCCATCCTACCTGCCACTATTACTaGGCCAAGAGCCTATACCCA | + |
|
Preference number: 2 (lower is better) Translates to: NSTGPRAFLPLGVRQGHPTCHYY*AKSLYP Trigger: TGGGTATAGGCTCTTGGCCCAGTAATAGTGGCAGGT...AGGATGGCCTTGTCTGACACCAAGGGGAAGGAACGCCCTTGGTCCTGTGGAATT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000196964.2 |
||
| 3UTR CAA 90 bp | AGGACAAGTGGGCTCCAGGGCAGGCCTTGTGTCCACCATGCTGTATaGGGAAGCTCGGTACTGTTTTCTCTCCAGGAGAAGTTTGGTTTT | + |
|
Preference number: 2 (lower is better) Translates to: RTSGLQGRPCVHHAV*GSSVLFSLQEKFGF Trigger: AAAACCAAACTTCTCCTGGAGAGAAAACAGTACCGAGCTTCCCAATACAGCATGGTGGACACAAGGCCTGCCCTGGAGCCCACTTGTCCT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000196964.2 |
||
| 3UTR-3UTR TCA 90 bp | CATCCCCCTACACGGAGCCATCAGAATTCCACAGGACCAAGGGCGTTCCTTCCCTACTCACAAGCACACTaGATCAGAAACTGTCTTACC | + |
|
Preference number: 2 (lower is better) Translates to: HPPTRSHQNSTGPRAFLPYSQAH*IRNCLT Trigger: GGTAAGACAGTTTCTGATTCAGTGTGCTTGTGAGTA...GGGAAGGAACGCCCTTGGTCCTGTGGAATTCTGATGGCTCCGTGTAGGGGGATG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000196964.2 |
||
| 3UTR-3UTR TCA 90 bp | CATCCCCCTACACGGAGCCATCAGAATTCCACAGGACCAAGGGCGTTCCTTCCCCCAGAGTTAATATTGTaGATTCGGCCATGTTCTGGA | + |
|
Preference number: 2 (lower is better) Translates to: HPPTRSHQNSTGPRAFLPPELIL*IRPCSG Trigger: TCCAGAACATGGCCGAATTCACAATATTAACTCTGG...GGGAAGGAACGCCCTTGGTCCTGTGGAATTCTGATGGCTCCGTGTAGGGGGATG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000196964.2 |
||
| 3UTR-3UTR CCA 90 bp | CATCCCCCTACACGGAGCCATCAGAATTCCACAGGACCAAGGGCGTTCCTTCCCAATTCGGCCATGTTCTaGAAAGCAAACCTTGAGTCA | + |
|
Preference number: 2 (lower is better) Translates to: HPPTRSHQNSTGPRAFLPNSAMF*KANLES Trigger: TGACTCAAGGTTTGCTTTCCAGAACATGGCCGAATT...GGGAAGGAACGCCCTTGGTCCTGTGGAATTCTGATGGCTCCGTGTAGGGGGATG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000196964.2 |
||
| 3UTR-3UTR CCA 90 bp | AATTCCACAGGACCAAGGGCGTTCCTTCCCCTTGGTGTCAGACAAGGCCATCCTGAGTGCTGCCACAGATaGATTCCACACATTCCACAT | + |
|
Preference number: 2 (lower is better) Translates to: NSTGPRAFLPLGVRQGHPECCHR*IPHIPH Trigger: ATGTGGAATGTGTGGAATCCATCTGTGGCAGCACTC...AGGATGGCCTTGTCTGACACCAAGGGGAAGGAACGCCCTTGGTCCTGTGGAATT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000196964.2 |
||
| 3UTR-3UTR CCA 90 bp | CCCTTGGTGTCAGACAAGGCCATCCTCTGCTACATATGCAGCTGGAGCCATGGGGTGCTCAGTCCTATATaGTACCCTAAGGGATCATTG | + |
|
Preference number: 2 (lower is better) Translates to: PLVSDKAILCYICSWSHGVLSPI*YPKGSL Trigger: CAATGATCCCTTAGGGTACCATATAGGACTGAGCAC...CCCATGGCTCCAGCTGCATATGTAGCAGAGGATGGCCTTGTCTGACACCAAGGG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000196964.2 |
||
| 3UTR-3UTR TCA 90 bp | CTGACAGTGACCACGACAGCCACAGGATCCAGGTATAAGCTCAAGCCAGAAGAATCATTCTGGTCCTCCTaGAACTCTGGCCTTTCTCAC | + |
|
Preference number: 2 (lower is better) Translates to: LTVTTTATGSRYKLKPEESFWSS*NSGLSH Trigger: GTGAGAAAGGCCAGAGTTTCAGGAGGACCAGAATGA...TTCTTCTGGCTTGAGCTTATACCTGGATCCTGTGGCTGTCGTGGTCACTGTCAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000196964.2 |
||
| 3UTR-3UTR TCA 90 bp | CATCCCCCTACACGGAGCCATCAGAATTCCACAGGACCAAGGGCGTTCCTTCCCCATCAAGTCAGCAAATaGGTATGGCTTGTAAATGAG | + |
|
Preference number: 2 (lower is better) Translates to: HPPTRSHQNSTGPRAFLPHQVSK*VWLVNE Trigger: CTCATTTACAAGCCATACTCATTTGCTGACTTGATG...GGGAAGGAACGCCCTTGGTCCTGTGGAATTCTGATGGCTCCGTGTAGGGGGATG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000196964.2 |
||
| 3UTR-3UTR CCA 90 bp | CTGACAGTGACCACGACAGCCACAGGATCCAGGTATAAGCTCAAGCCAGAAGAATCCTTTGTAAGTTTGTaGAGGGTGGGCCAGCTCTCT | + |
|
Preference number: 2 (lower is better) Translates to: LTVTTTATGSRYKLKPEESFVSL*RVGQLS Trigger: AGAGAGCTGGCCCACCCTCCACAAACTTACAAAGGA...TTCTTCTGGCTTGAGCTTATACCTGGATCCTGTGGCTGTCGTGGTCACTGTCAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000196964.2 |
||
| 3UTR-3UTR CCA 90 bp | CTGACAGTGACCACGACAGCCACAGGATCCAGGTATAAGCTCAAGCCAGAAGAAGAGCTACACCAGGAATaGAACCCAAAGGAAAGGATG | + |
|
Preference number: 2 (lower is better) Translates to: LTVTTTATGSRYKLKPEEELHQE*NPKERM Trigger: CATCCTTTCCTTTGGGTTCCATTCCTGGTGTAGCTC...TTCTTCTGGCTTGAGCTTATACCTGGATCCTGTGGCTGTCGTGGTCACTGTCAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000196964.2 |
||
| 3UTR CAA 90 bp | TCAAGCTGTTCTCAGGAATGCTTTAACTACAGGGCATACCCGGGTTaGTTTTTCTTTGTTCTCAGCCCCAGGCAGCCTCTAGGCTCACAA | + |
|
Preference number: 2 (lower is better) Translates to: SSCSQECFNYRAYPG*FFFVLSPRQPLGSQ Trigger: TTGTGAGCCTAGAGGCTGCCTGGGGCTGAGAACAAAGAAAAACAAACCCGGGTATGCCCTGTAGTTAAAGCATTCCTGAGAACAGCTTGA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000200469.5 |
||
| 3UTR CAA 90 bp | GGGGGCATGAACTCCCTCCCACACCATGTTAAAATGTTGACTGGTTaGATCTTGTCCAGGTCTTCTGAGGGCTATCACATCTGCTGTGAA | + |
|
Preference number: 2 (lower is better) Translates to: GGMNSLPHHVKMLTG*ILSRSSEGYHICCE Trigger: TTCACAGCAGATGTGATAGCCCTCAGAAGACCTGGACAAGATCAAACCAGTCAACATTTTAACATGGTGTGGGAGGGAGTTCATGCCCCC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000196964.2 |
||
| 3UTR-3UTR GCA 90 bp | AATTCCACAGGACCAAGGGCGTTCCTTCCCCTTGGTGTCAGACAAGGCCATCCTTTTCCCACCAATTCCTaGTTTGTCTTCTCTTCGATT | + |
|
Preference number: 2 (lower is better) Translates to: NSTGPRAFLPLGVRQGHPFPTNS*FVFSSI Trigger: AATCGAAGAGAAGACAAAGCAGGAATTGGTGGGAAA...AGGATGGCCTTGTCTGACACCAAGGGGAAGGAACGCCCTTGGTCCTGTGGAATT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000196964.2 |
||
| 3UTR-3UTR TCA 90 bp | GTGTTCTGGGGACAGAACACTGAGCCTAGTTTATCTTCTCTCAGTTCCGACTTACCAGGTCCTTTATTCTaGGCTCCATCTGAGTTCGCA | + |
|
Preference number: 2 (lower is better) Translates to: VFWGQNTEPSLSSLSSDLPGPLF*APSEFA Trigger: TGCGAACTCAGATGGAGCTCAGAATAAAGGACCTGG...TAAGTCGGAACTGAGAGAAGATAAACTAGGCTCAGTGTTCTGTCCCCAGAACAC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000196964.2 |
||
| 3UTR-3UTR TCA 90 bp | AATTCCACAGGACCAAGGGCGTTCCTTCCCCTTGGTGTCAGACAAGGCCATCCTAGTATGGCTTGTAAATaGGAATTTCGGAAATCTTGG | + |
|
Preference number: 2 (lower is better) Translates to: NSTGPRAFLPLGVRQGHPSMACK*EFRKSW Trigger: CCAAGATTTCCGAAATTCTCATTTACAAGCCATACT...AGGATGGCCTTGTCTGACACCAAGGGGAAGGAACGCCCTTGGTCCTGTGGAATT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000196964.2 |
||
| 3UTR-3UTR CCA 90 bp | CCCTTGGTGTCAGACAAGGCCATCCTCTGCTACATATGCAGCTGGAGCCATGGGTATTCATCTGGTAAATaGACATCACATCAAACTGAC | + |
|
Preference number: 2 (lower is better) Translates to: PLVSDKAILCYICSWSHGYSSGK*TSHQTD Trigger: GTCAGTTTGATGTGATGTCCATTTACCAGATGAATA...CCCATGGCTCCAGCTGCATATGTAGCAGAGGATGGCCTTGTCTGACACCAAGGG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000196964.2 |
||
| 3UTR-3UTR TCA 90 bp | CTGACAGTGACCACGACAGCCACAGGATCCAGGTATAAGCTCAAGCCAGAAGAAGTCTCTTTTAACTTGTaGTTTTCAAGTCCAAGCCAC | + |
|
Preference number: 2 (lower is better) Translates to: LTVTTTATGSRYKLKPEEVSFNL*FSSPSH Trigger: GTGGCTTGGACTTGAAAATCACAAGTTAAAAGAGAC...TTCTTCTGGCTTGAGCTTATACCTGGATCCTGTGGCTGTCGTGGTCACTGTCAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000196964.2 |
||
| 3UTR CAA 90 bp | GGCGATGGATATGAAGTGCCAGTCCGATCAAAGAACCTATTGCAATaGGTAGCTGTTGATAGGGAGACAGTTTTCTTTAAGAGTGCTGCC | + |
|
Preference number: 2 (lower is better) Translates to: GDGYEVPVRSKNLLQ*VAVDRETVFFKSAA Trigger: GGCAGCACTCTTAAAGAAAACTGTCTCCCTATCAACAGCTACCAATTGCAATAGGTTCTTTGATCGGACTGGCACTTCATATCCATCGCC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000196964.2 |
||
| 3UTR-3UTR CCA 90 bp | TCCTCACATTCCTCTTTATCTTTATGGTCAAGCTGTTCTCAGGAATGCTTTAACCAGGAACTGTGGACCTaGGCTCGTCTCAGCATCCAT | + |
|
Preference number: 2 (lower is better) Translates to: SSHSSLSLWSSCSQECFNQELWT*ARLSIH Trigger: ATGGATGCTGAGACGAGCCCAGGTCCACAGTTCCTG...GTTAAAGCATTCCTGAGAACAGCTTGACCATAAAGATAAAGAGGAATGTGAGGA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000200469.5 |
||
| 3UTR-3UTR CCA 90 bp | TTATGTCCTCACATTCCTCTTTATCTTTATGGTCAAGCTGTTCTCAGGAATGCTATTCATCAGGAACTGTaGACCTGGGCTCGTCTCAGC | + |
|
Preference number: 2 (lower is better) Translates to: LCPHIPLYLYGQAVLRNAIHQEL*TWARLS Trigger: GCTGAGACGAGCCCAGGTCCACAGTTCCTGATGAAT...AGCATTCCTGAGAACAGCTTGACCATAAAGATAAAGAGGAATGTGAGGACATAA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000200469.5 |
||
| 3UTR CAA 90 bp | ATGAACTCCCTCCCACACCATGTTAAAATGTTGACTGGTTTGATCTaGTCCAGGTCTTCTGAGGGCTATCACATCTGCTGTGAATTTATG | + |
|
Preference number: 2 (lower is better) Translates to: MNSLPHHVKMLTGLI*SRSSEGYHICCEFM Trigger: CATAAATTCACAGCAGATGTGATAGCCCTCAGAAGACCTGGACAAGATCAAACCAGTCAACATTTTAACATGGTGTGGGAGGGAGTTCAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000196964.2 |
||
| 3UTR CAA 90 bp | GCAGTTGGCGATGGATATGAAGTGCCAGTCCGATCAAAGAACCTATaGCAATTGGTAGCTGTTGATAGGGAGACAGTTTTCTTTAAGAGT | + |
|
Preference number: 2 (lower is better) Translates to: AVGDGYEVPVRSKNL*QLVAVDRETVFFKS Trigger: ACTCTTAAAGAAAACTGTCTCCCTATCAACAGCTACCAATTGCAATAGGTTCTTTGATCGGACTGGCACTTCATATCCATCGCCAACTGC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000196964.2 |
||
| 3UTR-3UTR TCA 90 bp | ATATACTCACAGGTGTGGGGCCATCCACTAAACATGGTTGACTTTCTAGGAGCCCTATCACATCTGCTGTaGATTTATGAATACTGTGGT | + |
|
Preference number: 2 (lower is better) Translates to: IYSQVWGHPLNMVDFLGALSHLL*IYEYCG Trigger: ACCACAGTATTCATAAATTCACAGCAGATGTGATAG...GGCTCCTAGAAAGTCAACCATGTTTAGTGGATGGCCCCACACCTGTGAGTATAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000196964.2 |
||
| 3UTR-3UTR TCA 90 bp | ATATGGTACCCTAAGGGATCATTGCAGAAGGGGCATAAAGAATGTAAAAGCAAGGACATGTCCTGCCAATaGATTGTGGCCTCAGATCAA | + |
|
Preference number: 2 (lower is better) Translates to: IWYPKGSLQKGHKECKSKDMSCQ*IVASDQ Trigger: TTGATCTGAGGCCACAATTCATTGGCAGGACATGTC...CTTGCTTTTACATTCTTTATGCCCCTTCTGCAATGATCCCTTAGGGTACCATAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000196964.2 |
||
| 3UTR-3UTR GCA 90 bp | GTGTTCTGGGGACAGAACACTGAGCCTAGTTTATCTTCTCTCAGTTCCGACTTACTGTTCAATTTTCTCTaGTTGCTTTCTTGCTGTCTC | + |
|
Preference number: 2 (lower is better) Translates to: VFWGQNTEPSLSSLSSDLLFNFL*LLSCCL Trigger: GAGACAGCAAGAAAGCAAGCAGAGAAAATTGAACAG...TAAGTCGGAACTGAGAGAAGATAAACTAGGCTCAGTGTTCTGTCCCCAGAACAC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000196964.2 |
||
| 3UTR-3UTR CCA 90 bp | ATGAACTCCCTCCCACACCATGTTAAAATGTTGACTGGTTTGATCTTGTCCAGGTGGTTTTGTCCTGCCTaGAAGACTCTGTTTCATTCT | + |
|
Preference number: 2 (lower is better) Translates to: MNSLPHHVKMLTGLILSRWFCPA*KTLFHS Trigger: AGAATGAAACAGAGTCTTCCAGGCAGGACAAAACCA...CCTGGACAAGATCAAACCAGTCAACATTTTAACATGGTGTGGGAGGGAGTTCAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000196964.2 |
||
| 3UTR CAA 90 bp | AATGGAACCCAAAGGAAAGGATGGAAGATAAAACTAACCTTGGTCTaGCAATTTTCCATGGTCTCAATTGAGTGCCAGAGGTCTGACTTA | + |
|
Preference number: 2 (lower is better) Translates to: NGTQRKGWKIKLTLV*QFSMVSIECQRSDL Trigger: TAAGTCAGACCTCTGGCACTCAATTGAGACCATGGAAAATTGCAAGACCAAGGTTAGTTTTATCTTCCATCCTTTCCTTTGGGTTCCATT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000196964.2 |
||
| 3UTR-3UTR TCA 90 bp | CAGAGGTCTGACTTAGGAAGCATGATTTCGCCTGAGAAACTTCTTGGAATGAAACCTGCAAGAATAGGTTaGCTTGTTTTAACTTTCCCA | + |
|
Preference number: 2 (lower is better) Translates to: QRSDLGSMISPEKLLGMKPARIG*LVLTFP Trigger: TGGGAAAGTTAAAACAAGTCAACCTATTCTTGCAGG...TTTCATTCCAAGAAGTTTCTCAGGCGAAATCATGCTTCCTAAGTCAGACCTCTG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000196964.2 |
||
| 3UTR-3UTR TCA 90 bp | ATGAACTCCCTCCCACACCATGTTAAAATGTTGACTGGTTTGATCTTGTCCAGGTCTGCTGTGAATTTATaGATACTGTGGTTTTGTCCT | + |
|
Preference number: 2 (lower is better) Translates to: MNSLPHHVKMLTGLILSRSAVNL*ILWFCP Trigger: AGGACAAAACCACAGTATTCATAAATTCACAGCAGA...CCTGGACAAGATCAAACCAGTCAACATTTTAACATGGTGTGGGAGGGAGTTCAT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000196964.2 |
||
| 3UTR-3UTR GCA 90 bp | CAGAGGTCTGACTTAGGAAGCATGATTTCGCCTGAGAAACTTCTTGGAATGAAATTTGGTTTTGACCTCTaGCAGTCTTTCATCTGTTCT | + |
|
Preference number: 2 (lower is better) Translates to: QRSDLGSMISPEKLLGMKFGFDL*QSFICS Trigger: AGAACAGATGAAAGACTGGCAGAGGTCAAAACCAAA...TTTCATTCCAAGAAGTTTCTCAGGCGAAATCATGCTTCCTAAGTCAGACCTCTG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000196964.2 |
||
| 3UTR-3UTR CCA 90 bp | ATATGGTACCCTAAGGGATCATTGCAGAAGGGGCATAAAGAATGTAAAAGCAAGGTAAAAATTGTGTTCTaGGGACAGAACACTGAGCCT | + |
|
Preference number: 2 (lower is better) Translates to: IWYPKGSLQKGHKECKSKVKIVF*GQNTEP Trigger: AGGCTCAGTGTTCTGTCCCCAGAACACAATTTTTAC...CTTGCTTTTACATTCTTTATGCCCCTTCTGCAATGATCCCTTAGGGTACCATAT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000196964.2 |
||
| 3UTR-3UTR CCA 90 bp | ATATGGTACCCTAAGGGATCATTGCAGAAGGGGCATAAAGAATGTAAAAGCAAGGAAGAAATATCAGCATaGCAGTTGGCGATGGATATG | + |
|
Preference number: 2 (lower is better) Translates to: IWYPKGSLQKGHKECKSKEEISA*QLAMDM Trigger: CATATCCATCGCCAACTGCCATGCTGATATTTCTTC...CTTGCTTTTACATTCTTTATGCCCCTTCTGCAATGATCCCTTAGGGTACCATAT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000196964.2 |
||
| 3UTR-3UTR CCA 90 bp | CAGAGGTCTGACTTAGGAAGCATGATTTCGCCTGAGAAACTTCTTGGAATGAAAAGAGATGTAGATATTTaGCAGATGCAGATTCCAATT | + |
|
Preference number: 2 (lower is better) Translates to: QRSDLGSMISPEKLLGMKRDVDI*QMQIPI Trigger: AATTGGAATCTGCATCTGCCAAATATCTACATCTCT...TTTCATTCCAAGAAGTTTCTCAGGCGAAATCATGCTTCCTAAGTCAGACCTCTG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000196964.2 |
||
| 3UTR-3UTR CCA 90 bp | ATATGGTACCCTAAGGGATCATTGCAGAAGGGGCATAAAGAATGTAAAAGCAAGACCCAAAGGAAAGGATaGAAGATAAAACTAACCTTG | + |
|
Preference number: 2 (lower is better) Translates to: IWYPKGSLQKGHKECKSKTQRKG*KIKLTL Trigger: CAAGGTTAGTTTTATCTTCCATCCTTTCCTTTGGGT...CTTGCTTTTACATTCTTTATGCCCCTTCTGCAATGATCCCTTAGGGTACCATAT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000196964.2 |
||
| 3UTR TCA 72 bp | GCGTGTGCTCACACAGTAGCAGGCACTGGCAGAGCTTaGAGTACTAGAGCCCCTGGAGCTGGACTTGCAGGG | + |
|
Preference number: 3 (lower is better) Translates to: ACAHTVAGTGRA*STRAPGAGLAG Trigger: CCCTGCAAGTCCAGCTCCAGGGGCTCTAGTACTTCAAGCTCTGCCAGTGCCTGCTACTGTGTGAGCACACGC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000196964.2 |
||
| 3UTR GCA 72 bp | CGTTCCTTCCCCTTGGTGTCAGACAAGGCCATCCTCTaGTACATATGCAGCTGGAGCCATGGGTCCCTCCAT | + |
|
Preference number: 3 (lower is better) Translates to: RSFPLVSDKAIL*YICSWSHGSLH Trigger: ATGGAGGGACCCATGGCTCCAGCTGCATATGTAGCAGAGGATGGCCTTGTCTGACACCAAGGGGAAGGAACG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000196964.2 |
||
| 3UTR TCA 72 bp | ATCCTCCTTCTCGGTTACCCCTCCCCTTTGCCTCTATaGGGATGCTCGTCCACCCACTCCCACATTACCACT | + |
|
Preference number: 3 (lower is better) Translates to: ILLLGYPSPLPL*GCSSTHSHITT Trigger: AGTGGTAATGTGGGAGTGGGTGGACGAGCATCCTCATAGAGGCAAAGGGGAGGGGTAACCGAGAAGGAGGAT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000196964.2 |
||
| 3UTR GCA 72 bp | CAAATAATATCCTCCTTCTCGGTTACCCCTCCCCTTTaGCTCTATGAGGATGCTCGTCCACCCACTCCCACA | + |
|
Preference number: 3 (lower is better) Translates to: QIISSFSVTPPL*LYEDARPPTPT Trigger: TGTGGGAGTGGGTGGACGAGCATCCTCATAGAGGCAAAGGGGAGGGGTAACCGAGAAGGAGGATATTATTTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000196964.2 |
||
| 3UTR CCA 72 bp | GTGTCAGACAAGGCCATCCTCTGCTACATATGCAGCTaGAGCCATGGGTCCCTCCATGTGTACTCTTTGGTT | + |
|
Preference number: 3 (lower is better) Translates to: VSDKAILCYICS*SHGSLHVYSLV Trigger: AACCAAAGAGTACACATGGAGGGACCCATGGCTCCAGCTGCATATGTAGCAGAGGATGGCCTTGTCTGACAC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000196964.2 |
||
| 3UTR CCA 72 bp | TCAGAATTCCACAGGACCAAGGGCGTTCCTTCCCCTTaGTGTCAGACAAGGCCATCCTCTGCTACATATGCA | + |
|
Preference number: 3 (lower is better) Translates to: SEFHRTKGVPSP*CQTRPSSATYA Trigger: TGCATATGTAGCAGAGGATGGCCTTGTCTGACACCAAGGGGAAGGAACGCCCTTGGTCCTGTGGAATTCTGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000196964.2 |
||
| 3UTR-3UTR CAA 90 bp | CATCCCCCTACACGGAGCCATCAGAATTCCACAGGACCAAGGGCGTTCCTTCCCTGTTACCCTTATTTTTaGTGTGTGTGTGTGGTGCTG | + |
|
Preference number: 3 (lower is better) Translates to: HPPTRSHQNSTGPRAFLPCYPYF*CVCVVL Trigger: CAGCACCACACACACACACAAAAAATAAGGGTAACA...GGGAAGGAACGCCCTTGGTCCTGTGGAATTCTGATGGCTCCGTGTAGGGGGATG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000196964.2 |
||
| 3UTR-3UTR CAA 90 bp | CTGACAGTGACCACGACAGCCACAGGATCCAGGTATAAGCTCAAGCCAGAAGAACTCTCCAGGAGAAGTTaGGTTTTGACCTCTGCCAGT | + |
|
Preference number: 3 (lower is better) Translates to: LTVTTTATGSRYKLKPEELSRRS*VLTSAS Trigger: ACTGGCAGAGGTCAAAACCAAACTTCTCCTGGAGAG...TTCTTCTGGCTTGAGCTTATACCTGGATCCTGTGGCTGTCGTGGTCACTGTCAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000196964.2 |
||
| 3UTR-3UTR CAA 90 bp | CATCCCCCTACACGGAGCCATCAGAATTCCACAGGACCAAGGGCGTTCCTTCCCAAACTAACCTTGGTCTaGCAATTTTCCATGGTCTCA | + |
|
Preference number: 3 (lower is better) Translates to: HPPTRSHQNSTGPRAFLPKLTLV*QFSMVS Trigger: TGAGACCATGGAAAATTGCAAGACCAAGGTTAGTTT...GGGAAGGAACGCCCTTGGTCCTGTGGAATTCTGATGGCTCCGTGTAGGGGGATG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000196964.2 |
||
| 3UTR-3UTR CAA 90 bp | CTGACAGTGACCACGACAGCCACAGGATCCAGGTATAAGCTCAAGCCAGAAGAAAACTGGGCTCGATGGTaGAATAAAAGGAGAGGCACC | + |
|
Preference number: 3 (lower is better) Translates to: LTVTTTATGSRYKLKPEENWARW*NKRRGT Trigger: GGTGCCTCTCCTTTTATTCAACCATCGAGCCCAGTT...TTCTTCTGGCTTGAGCTTATACCTGGATCCTGTGGCTGTCGTGGTCACTGTCAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000196964.2 |
||
| 3UTR TCA 72 bp | TGCTGCCACAGATGGATTCCACACATTCCACATTCATaGACTCATGGGCACCGAAACTGGGCTCGATGGTTG | + |
|
Preference number: 3 (lower is better) Translates to: CCHRWIPHIPHS*THGHRNWARWL Trigger: CAACCATCGAGCCCAGTTTCGGTGCCCATGAGTTCATGAATGTGGAATGTGTGGAATCCATCTGTGGCAGCA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000196964.2 |
||
| 3UTR CCA 72 bp | TTCTACGGAGTCCAGATTCAGATTCATCAGGAACTGTaGACCTGGGCTCGTCTCAGCATCCATCAGAGAAGC | + |
|
Preference number: 3 (lower is better) Translates to: FYGVQIQIHQEL*TWARLSIHQRS Trigger: GCTTCTCTGATGGATGCTGAGACGAGCCCAGGTCCACAGTTCCTGATGAATCTGAATCTGGACTCCGTAGAA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000200469.5 |
||
| 3UTR CCA 72 bp | TGGTTGAATAAAAGGAGAGGCACCCACAAAGTTGAGTaGGTAAGGAAGAGGGCACGGGAGAGTTTTCCACGG | + |
|
Preference number: 3 (lower is better) Translates to: WLNKRRGTHKVE*VRKRARESFPR Trigger: CCGTGGAAAACTCTCCCGTGCCCTCTTCCTTACCCACTCAACTTTGTGGGTGCCTCTCCTTTTATTCAACCA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000196964.2 |
||
| 3UTR-3UTR CAA 90 bp | CCCTTGGTGTCAGACAAGGCCATCCTCTGCTACATATGCAGCTGGAGCCATGGGAAAATGTTGACTGGTTaGATCTTGTCCAGGTCTTCT | + |
|
Preference number: 3 (lower is better) Translates to: PLVSDKAILCYICSWSHGKMLTG*ILSRSS Trigger: AGAAGACCTGGACAAGATCAAACCAGTCAACATTTT...CCCATGGCTCCAGCTGCATATGTAGCAGAGGATGGCCTTGTCTGACACCAAGGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000196964.2 |
||
| 3UTR TCA 72 bp | TGTGTGTGTGTGGTGCTGAAGCTCAAACACATGTGCTaGGGACATGTCCTGCCAATGAATTGTGGCCTCAGA | + |
|
Preference number: 3 (lower is better) Translates to: CVCVVLKLKHMC*GHVLPMNCGLR Trigger: TCTGAGGCCACAATTCATTGGCAGGACATGTCCTCAGCACATGTGTTTGAGCTTCAGCACCACACACACACA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000196964.2 |
||
| 3UTR TCA 72 bp | TTCCTTTGTAAGTTTGTGGAGGGTGGGCCAGCTCTCTaGCTGGGCATCAGCACCAGCCTACAAATTTACATC | + |
|
Preference number: 3 (lower is better) Translates to: FLCKFVEGGPAL*LGISTSLQIYI Trigger: GATGTAAATTTGTAGGCTGGTGCTGATGCCCAGTCAGAGAGCTGGCCCACCCTCCACAAACTTACAAAGGAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000196964.2 |
||
| 3UTR-3UTR CAA 90 bp | AATTCCACAGGACCAAGGGCGTTCCTTCCCCTTGGTGTCAGACAAGGCCATCCTCACCATGTTAAAATGTaGACTGGTTTGATCTTGTCC | + |
|
Preference number: 3 (lower is better) Translates to: NSTGPRAFLPLGVRQGHPHHVKM*TGLILS Trigger: GGACAAGATCAAACCAGTCAACATTTTAACATGGTG...AGGATGGCCTTGTCTGACACCAAGGGGAAGGAACGCCCTTGGTCCTGTGGAATT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000196964.2 |
||
| 3UTR GCA 72 bp | GCATTCATACTGGCTAGCCTGCCTAGTGCTGGAGCATaGTATCTATGTGTGCTAGTAGAGGACGAAGACAAT | + |
|
Preference number: 3 (lower is better) Translates to: AFILASLPSAGA*YLCVLVEDEDN Trigger: ATTGTCTTCGTCCTCTACTAGCACACATAGATAGCATGCTCCAGCACTAGGCAGGCTAGCCAGTATGAATGC 49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000196964.2 |
||
| 3UTR CCA 72 bp | TTTGTAAGTTTGTGGAGGGTGGGCCAGCTCTCTGACTaGGCATCAGCACCAGCCTACAAATTTACATCCTAT | + |
|
Preference number: 3 (lower is better) Translates to: FVSLWRVGQLSD*ASAPAYKFTSY Trigger: ATAGGATGTAAATTTGTAGGCTGGTGCTGATGCCCAGTCAGAGAGCTGGCCCACCCTCCACAAACTTACAAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000196964.2 |
||
| 3UTR CCA 72 bp | GATAAGCTGGTCCTGACCTGTAAAGTGCATTCATACTaGCTAGCCTGCCTAGTGCTGGAGCATGCTATCTAT | + |
|
Preference number: 3 (lower is better) Translates to: DKLVLTCKVHSY*LACLVLEHAIY Trigger: ATAGATAGCATGCTCCAGCACTAGGCAGGCTAGCCAGTATGAATGCACTTTACAGGTCAGGACCAGCTTATC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000196964.2 |
||
| 3UTR-3UTR CAA 90 bp | CTGACAGTGACCACGACAGCCACAGGATCCAGGTATAAGCTCAAGCCAGAAGAACTTAACTTCTCTAGCTaGTCTTCATACGCTGCTTGT | + |
|
Preference number: 3 (lower is better) Translates to: LTVTTTATGSRYKLKPEELNFSS*SSYAAC Trigger: ACAAGCAGCGTATGAAGACAAGCTAGAGAAGTTAAG...TTCTTCTGGCTTGAGCTTATACCTGGATCCTGTGGCTGTCGTGGTCACTGTCAG 48% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000196964.2 |
||
| 3UTR-3UTR CAA 90 bp | AATTCCACAGGACCAAGGGCGTTCCTTCCCCTTGGTGTCAGACAAGGCCATCCTTTACCATCATGTCCATaGATTAATGCATCTCCTCAA | + |
|
Preference number: 3 (lower is better) Translates to: NSTGPRAFLPLGVRQGHPLPSCP*INASPQ Trigger: TTGAGGAGATGCATTAATCAATGGACATGATGGTAA...AGGATGGCCTTGTCTGACACCAAGGGGAAGGAACGCCCTTGGTCCTGTGGAATT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000196964.2 |
||
| 3UTR-3UTR CAA 90 bp | GTGTTCTGGGGACAGAACACTGAGCCTAGTTTATCTTCTCTCAGTTCCGACTTACCACCAATTCCTGCTTaGTCTTCTCTTCGATTTCCC | + |
|
Preference number: 3 (lower is better) Translates to: VFWGQNTEPSLSSLSSDLPPIPA*SSLRFP Trigger: GGGAAATCGAAGAGAAGACAAAGCAGGAATTGGTGG...TAAGTCGGAACTGAGAGAAGATAAACTAGGCTCAGTGTTCTGTCCCCAGAACAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000196964.2 |
||
| 3UTR-3UTR CAA 90 bp | CAGAGGTCTGACTTAGGAAGCATGATTTCGCCTGAGAAACTTCTTGGAATGAAACTTTCCTTTGTAAGTTaGTGGAGGGTGGGCCAGCTC | + |
|
Preference number: 3 (lower is better) Translates to: QRSDLGSMISPEKLLGMKLSFVS*WRVGQL Trigger: GAGCTGGCCCACCCTCCACAAACTTACAAAGGAAAG...TTTCATTCCAAGAAGTTTCTCAGGCGAAATCATGCTTCCTAAGTCAGACCTCTG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000196964.2 |
||
| 3UTR CCA 72 bp | ACCTGGCTGAGCAACCCTGTGGTATGTGATAGCAATTaGCCTAGCAAGAGATTGTTAACTGGTGCAATAGTG | + |
|
Preference number: 3 (lower is better) Translates to: TWLSNPVVCDSN*PSKRLLTGAIV Trigger: CACTATTGCACCAGTTAACAATCTCTTGCTAGGCCAATTGCTATCACATACCACAGGGTTGCTCAGCCAGGT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000196964.2 |
||
| 3UTR-3UTR CAA 90 bp | CAGAGGTCTGACTTAGGAAGCATGATTTCGCCTGAGAAACTTCTTGGAATGAAATTGACTGGTTTGATCTaGTCCAGGTCTTCTGAGGGC | + |
|
Preference number: 3 (lower is better) Translates to: QRSDLGSMISPEKLLGMKLTGLI*SRSSEG Trigger: GCCCTCAGAAGACCTGGACAAGATCAAACCAGTCAA...TTTCATTCCAAGAAGTTTCTCAGGCGAAATCATGCTTCCTAAGTCAGACCTCTG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000196964.2 |
||
| 3UTR TCA 72 bp | AGCTCAAACACATGTGCTGAGGACATGTCCTGCCAATaGATTGTGGCCTCAGATCAACATTATTCCATGGTG | + |
|
Preference number: 3 (lower is better) Translates to: SSNTCAEDMSCQ*IVASDQHYSMV Trigger: CACCATGGAATAATGTTGATCTGAGGCCACAATTCATTGGCAGGACATGTCCTCAGCACATGTGTTTGAGCT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000196964.2 |
||
| 3UTR GCA 72 bp | ACCTTGGTCTTGCAATTTTCCATGGTCTCAATTGAGTaGCAGAGGTCTGACTTAGGAAGCATGATTTCGCCT | + |
|
Preference number: 3 (lower is better) Translates to: TLVLQFSMVSIE*QRSDLGSMISP Trigger: AGGCGAAATCATGCTTCCTAAGTCAGACCTCTGGCACTCAATTGAGACCATGGAAAATTGCAAGACCAAGGT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000196964.2 |
||
| 3UTR CCA 72 bp | TTTAAAAATTCGATTCTCCTTTCCTTTGTAAGTTTGTaGAGGGTGGGCCAGCTCTCTGACTGGGCATCAGCA | + |
|
Preference number: 3 (lower is better) Translates to: FKNSILLSFVSL*RVGQLSDWASA Trigger: TGCTGATGCCCAGTCAGAGAGCTGGCCCACCCTCCACAAACTTACAAAGGAAAGGAGAATCGAATTTTTAAA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000196964.2 |
||
| 3UTR GCA 72 bp | GAGTGCTCAGTCCTATATGGTACCCTAAGGGATCATTaGAGAAGGGGCATAAAGAATGTAAAAGCAAGAGGA | + |
|
Preference number: 3 (lower is better) Translates to: ECSVLYGTLRDH*RRGIKNVKARG Trigger: TCCTCTTGCTTTTACATTCTTTATGCCCCTTCTGCAATGATCCCTTAGGGTACCATATAGGACTGAGCACTC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000196964.2 |
||
| 3UTR-3UTR CAA 90 bp | CAGGCAGCCTCTAGGCTCACAAACAACCAGCAATTTCTGAGTACTTTATATGTCACATGTTCTGATAGGTaGTCTAGGAAGACTCTAGCT | + |
|
Preference number: 3 (lower is better) Translates to: QAASRLTNNQQFLSTLYVTCSDR*SRKTLA Trigger: AGCTAGAGTCTTCCTAGACAACCTATCAGAACATGT...GACATATAAAGTACTCAGAAATTGCTGGTTGTTTGTGAGCCTAGAGGCTGCCTG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000200469.5 |
||
| 3UTR-3UTR CAA 90 bp | CAGAGGTCTGACTTAGGAAGCATGATTTCGCCTGAGAAACTTCTTGGAATGAAATGTCCTGCCAATGAATaGTGGCCTCAGATCAACATT | + |
|
Preference number: 3 (lower is better) Translates to: QRSDLGSMISPEKLLGMKCPANE*WPQINI Trigger: AATGTTGATCTGAGGCCACAATTCATTGGCAGGACA...TTTCATTCCAAGAAGTTTCTCAGGCGAAATCATGCTTCCTAAGTCAGACCTCTG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000196964.2 |
||
| 3UTR TCA 72 bp | GTGTCAGAGTTCTGTGAGTTGGATGTTTATCAATGCTaGCTCAGTTCAGATAGCCCTGTTATGTCCTCACAT | + |
|
Preference number: 3 (lower is better) Translates to: VSEFCELDVYQC*LSSDSPVMSSH Trigger: ATGTGAGGACATAACAGGGCTATCTGAACTGAGTCAGCATTGATAAACATCCAACTCACAGAACTCTGACAC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000200469.5 |
||
| 3UTR TCA 72 bp | GGCTCCACCCTTTCTGTCTTCTACTCACAAGCACACTaGATCAGAAACTGTCTTACCATTTTCCAAGGAATA | + |
|
Preference number: 3 (lower is better) Translates to: GSTLSVFYSQAH*IRNCLTIFQGI Trigger: TATTCCTTGGAAAATGGTAAGACAGTTTCTGATTCAGTGTGCTTGTGAGTAGAAGACAGAAAGGGTGGAGCC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000196964.2 |
||
| 3UTR GCA 72 bp | TTGATCTTGTCCAGGTCTTCTGAGGGCTATCACATCTaGTGTGAATTTATGAATACTGTGGTTTTGTCCTGC | + |
|
Preference number: 3 (lower is better) Translates to: LILSRSSEGYHI*CEFMNTVVLSC Trigger: GCAGGACAAAACCACAGTATTCATAAATTCACAGCAGATGTGATAGCCCTCAGAAGACCTGGACAAGATCAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000196964.2 |
||
| 3UTR CCA 72 bp | AGCCCTGTTATGTCCTCACATTCCTCTTTATCTTTATaGTCAAGCTGTTCTCAGGAATGCTTTAACTACAGG | + |
|
Preference number: 3 (lower is better) Translates to: SPVMSSHSSLSL*SSCSQECFNYR Trigger: CCTGTAGTTAAAGCATTCCTGAGAACAGCTTGACCATAAAGATAAAGAGGAATGTGAGGACATAACAGGGCT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000200469.5 |
||
| 3UTR CCA 72 bp | ATCAAGGCCAACATTACAGGTTTCTGCCAATGCTCTTaGTTATCCATAGAACTAGATGTCAAAATCCTACTC | + |
|
Preference number: 3 (lower is better) Translates to: IKANITGFCQCS*LSIELDVKILL Trigger: GAGTAGGATTTTGACATCTAGTTCTATGGATAACCAAGAGCATTGGCAGAAACCTGTAATGTTGGCCTTGAT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000196964.2 |
||
| 3UTR CCA 72 bp | TCATGTCCATTGATTAATGCATCTCCTCAACCCTCATaGGAAAGCTTTTCATTTGCTATAGATAGGGATGTA | + |
|
Preference number: 3 (lower is better) Translates to: SCPLINASPQPS*ESFSFAIDRDV Trigger: TACATCCCTATCTATAGCAAATGAAAAGCTTTCCCATGAGGGTTGAGGAGATGCATTAATCAATGGACATGA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000196964.2 |
||
| 3UTR CCA 72 bp | TGCAAAGACAGATTCTTCATACCTCATGTTCCTGAGTaGGTCCTAAATAACCTACATTTTAAACCGGTTAAT | + |
|
Preference number: 3 (lower is better) Translates to: CKDRFFIPHVPE*VLNNLHFKPVN Trigger: ATTAACCGGTTTAAAATGTAGGTTATTTAGGACCCACTCAGGAACATGAGGTATGAAGAATCTGTCTTTGCA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000196964.2 |
||
| 3UTR TCA 72 bp | TTCTCTGCTTGCTTTCTTGCTGTCTCTTTTAACTTGTaGTTTTCAAGTCCAAGCCACACTATTTATTTGCTT | + |
|
Preference number: 3 (lower is better) Translates to: FSACFLAVSFNL*FSSPSHTIYLL Trigger: AAGCAAATAAATAGTGTGGCTTGGACTTGAAAATCACAAGTTAAAAGAGACAGCAAGAAAGCAAGCAGAGAA 36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000196964.2 |
||
| 3UTR CAA 72 bp | GGGCTCCAGGGCAGGCCTTGTGTCCACCATGCTGTATaGGGAAGCTCGGTACTGTTTTCTCTCCAGGAGAAG | + |
|
Preference number: 4 (lower is better) Translates to: GLQGRPCVHHAV*GSSVLFSLQEK Trigger: CTTCTCCTGGAGAGAAAACAGTACCGAGCTTCCCAATACAGCATGGTGGACACAAGGCCTGCCCTGGAGCCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000196964.2 |
||
| 3UTR CAA 72 bp | ATCAGAATTCCACAGGACCAAGGGCGTTCCTTCCCCTaGGTGTCAGACAAGGCCATCCTCTGCTACATATGC | + |
|
Preference number: 4 (lower is better) Translates to: IRIPQDQGRSFP*VSDKAILCYIC Trigger: GCATATGTAGCAGAGGATGGCCTTGTCTGACACCAAGGGGAAGGAACGCCCTTGGTCCTGTGGAATTCTGAT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000196964.2 |
||
| CDS-3UTR GCA 90 bp | TCACAGGTGTGGGGCCATCCACTAAACATGGTTGACTTTCTAGGAGCCACACCCCCGTGTACTTTTGTATaGAGTCCCGCATCTTCTCCG | + |
|
Preference number: 4 (lower is better) Translates to: SQVWGHPLNMVDFLGATPPCTFV*SPASSP Trigger: CGGAGAAGATGCGGGACTGCATACAAAAGTACACGG...GGGTGTGGCTCCTAGAAAGTCAACCATGTTTAGTGGATGGCCCCACACCTGTGA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000196964.2 |
||
| 3UTR CAA 72 bp | GGGGGCATGAACTCCCTCCCACACCATGTTAAAATGTaGACTGGTTTGATCTTGTCCAGGTCTTCTGAGGGC | + |
|
Preference number: 4 (lower is better) Translates to: GGMNSLPHHVKM*TGLILSRSSEG Trigger: GCCCTCAGAAGACCTGGACAAGATCAAACCAGTCAACATTTTAACATGGTGTGGGAGGGAGTTCATGCCCCC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000196964.2 |
||
| CDS-3UTR GCA 90 bp | TTGTTTTTCTTTGTTCTCAGCCCCAGGCAGCCTCTAGGCTCACAAACAACCAGCGTCCAAGCTTTTGTATaGAGTCCCGCATCTTCTCCG | + |
|
Preference number: 4 (lower is better) Translates to: LFFFVLSPRQPLGSQTTSVQAFV*SPASSP Trigger: CGGAGAAGATGCGGGACTGCATACAAAAGCTTGGAC...GCTGGTTGTTTGTGAGCCTAGAGGCTGCCTGGGGCTGAGAACAAAGAAAAACAA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000200469.5 |
||
| CDS-3UTR CCA 90 bp | CAGCCCCAGGCAGCCTCTAGGCTCACAAACAACCAGCAATTTCTGAGTACTTTAAGACAGATGCACAACTaGTCAGAAGCCTTGGTCTTG | + |
|
Preference number: 4 (lower is better) Translates to: QPQAASRLTNNQQFLSTLRQMHN*SEALVL Trigger: CAAGACCAAGGCTTCTGACCAGTTGTGCATCTGTCT...TAAAGTACTCAGAAATTGCTGGTTGTTTGTGAGCCTAGAGGCTGCCTGGGGCTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000200469.5 |
||
| 3UTR CAA 72 bp | TCTCAGGAATGCTTTAACTACAGGGCATACCCGGGTTaGTTTTTCTTTGTTCTCAGCCCCAGGCAGCCTCTA | + |
|
Preference number: 4 (lower is better) Translates to: SQECFNYRAYPG*FFFVLSPRQPL Trigger: TAGAGGCTGCCTGGGGCTGAGAACAAAGAAAAACAAACCCGGGTATGCCCTGTAGTTAAAGCATTCCTGAGA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000200469.5 |
||
| CDS-3UTR TCA 90 bp | CTGACAGTGACCACGACAGCCACAGGATCCAGGTATAAGCTCAAGCCAGAAGAACTGGTGTTCTGTTCTTaGAAAAGTTGTCTCTCGATG | + |
|
Preference number: 4 (lower is better) Translates to: LTVTTTATGSRYKLKPEELVFCS*KSCLSM Trigger: CATCGAGAGACAACTTTTTCAAGAACAGAACACCAG...TTCTTCTGGCTTGAGCTTATACCTGGATCCTGTGGCTGTCGTGGTCACTGTCAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000196964.2 |
||
| CDS-3UTR TCA 90 bp | AACATCAGCAGAAAAATTACATGTACGTGCAGATCAGGGTGTCAGAGTTCTGTGCCAGGTCCTTTATTCTaGGCTCCATCTGAGTTCGCA | + |
|
Preference number: 4 (lower is better) Translates to: NISRKITCTCRSGCQSSVPGPLF*APSEFA Trigger: TGCGAACTCAGATGGAGCTCAGAATAAAGGACCTGG...CACAGAACTCTGACACCCTGATCTGCACGTACATGTAATTTTTCTGCTGATGTT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000200469.5 |
||
| CDS-3UTR GCA 90 bp | CAGCCCCAGGCAGCCTCTAGGCTCACAAACAACCAGCAATTTCTGAGTACTTTACTGTTCAATTTTCTCTaGTTGCTTTCTTGCTGTCTC | + |
|
Preference number: 4 (lower is better) Translates to: QPQAASRLTNNQQFLSTLLFNFL*LLSCCL Trigger: GAGACAGCAAGAAAGCAAGCAGAGAAAATTGAACAG...TAAAGTACTCAGAAATTGCTGGTTGTTTGTGAGCCTAGAGGCTGCCTGGGGCTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000200469.5 |
||
| 3UTR CAA 72 bp | CTCCCACACCATGTTAAAATGTTGACTGGTTTGATCTaGTCCAGGTCTTCTGAGGGCTATCACATCTGCTGT | + |
|
Preference number: 4 (lower is better) Translates to: LPHHVKMLTGLI*SRSSEGYHICC Trigger: ACAGCAGATGTGATAGCCCTCAGAAGACCTGGACAAGATCAAACCAGTCAACATTTTAACATGGTGTGGGAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000196964.2 |
||
| 3UTR CAA 72 bp | AACTCCCTCCCACACCATGTTAAAATGTTGACTGGTTaGATCTTGTCCAGGTCTTCTGAGGGCTATCACATC | + |
|
Preference number: 4 (lower is better) Translates to: NSLPHHVKMLTG*ILSRSSEGYHI Trigger: GATGTGATAGCCCTCAGAAGACCTGGACAAGATCAAACCAGTCAACATTTTAACATGGTGTGGGAGGGAGTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000196964.2 |
||
| CDS-3UTR TCA 90 bp | TTGTTTTTCTTTGTTCTCAGCCCCAGGCAGCCTCTAGGCTCACAAACAACCAGCTCATTCTCCACTGTTTaGAGTTTCTCTAGAAGTACT | + |
|
Preference number: 4 (lower is better) Translates to: LFFFVLSPRQPLGSQTTSSFSTV*SFSRST Trigger: AGTACTTCTAGAGAAACTTCAAACAGTGGAGAATGA...GCTGGTTGTTTGTGAGCCTAGAGGCTGCCTGGGGCTGAGAACAAAGAAAAACAA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000200469.5 |
||
| CDS-3UTR TCA 90 bp | ATGAACTCCCTCCCACACCATGTTAAAATGTTGACTGGTTTGATCTTGTCCAGGTCTTACGGAGTCCGTTaGCTTCATTCTCCACTGTTT | + |
|
Preference number: 4 (lower is better) Translates to: MNSLPHHVKMLTGLILSRSYGVR*LHSPLF Trigger: AAACAGTGGAGAATGAAGTCAACGGACTCCGTAAGA...CCTGGACAAGATCAAACCAGTCAACATTTTAACATGGTGTGGGAGGGAGTTCAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000196964.2 |
||
| CDS-3UTR GCA 90 bp | ATATGGTACCCTAAGGGATCATTGCAGAAGGGGCATAAAGAATGTAAAAGCAAGGAGTTGTTCACGTGCTaGGTCTGCAAGCTTCTTACG | + |
|
Preference number: 4 (lower is better) Translates to: IWYPKGSLQKGHKECKSKELFTC*VCKLLT Trigger: CGTAAGAAGCTTGCAGACGCAGCACGTGAACAACTC...CTTGCTTTTACATTCTTTATGCCCCTTCTGCAATGATCCCTTAGGGTACCATAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000196964.2 |
||
| CDS-3UTR GCA 90 bp | GTTTTTCTTTGTTCTCAGCCCCAGGCAGCCTCTAGGCTCACAAACAACCAGCAATTTGGTTTTGACCTCTaGCAGTCTTTCATCTGTTTT | + |
|
Preference number: 4 (lower is better) Translates to: VFLCSQPQAASRLTNNQQFGFDL*QSFICF Trigger: AAAACAGATGAAAGACTGGCAGAGGTCAAAACCAAA...TTGCTGGTTGTTTGTGAGCCTAGAGGCTGCCTGGGGCTGAGAACAAAGAAAAAC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000200469.5 |
||
| 3UTR CAA 72 bp | TATAAGCTCAAGCCAGAAGAAATATCAGCATGGCAGTaGGCGATGGATATGAAGTGCCAGTCCGATCAAAGA | + |
|
Preference number: 4 (lower is better) Translates to: YKLKPEEISAWQ*AMDMKCQSDQR Trigger: TCTTTGATCGGACTGGCACTTCATATCCATCGCCAACTGCCATGCTGATATTTCTTCTGGCTTGAGCTTATA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000196964.2 |
||
| 3UTR CAA 72 bp | AGAGTGCTCAGTCCTATATGGTACCCTAAGGGATCATaGCAGAAGGGGCATAAAGAATGTAAAAGCAAGAGG | + |
|
Preference number: 4 (lower is better) Translates to: RVLSPIWYPKGS*QKGHKECKSKR Trigger: CCTCTTGCTTTTACATTCTTTATGCCCCTTCTGCAATGATCCCTTAGGGTACCATATAGGACTGAGCACTCT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000196964.2 |
||
| CDS-3UTR GCA 90 bp | ATTCCTCTTTATCTTTATGGTCAAGCTGTTCTCAGGAATGCTTTAACTACAGGGGAGTTGTTCACGTGCTaGGTCTGCAAGCTTCTTACG | + |
|
Preference number: 4 (lower is better) Translates to: IPLYLYGQAVLRNALTTGELFTC*VCKLLT Trigger: CGTAAGAAGCTTGCAGACGCAGCACGTGAACAACTC...CCCTGTAGTTAAAGCATTCCTGAGAACAGCTTGACCATAAAGATAAAGAGGAAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000200469.5 |
||
| CDS-3UTR TCA 90 bp | GTTCTCAGGAATGCTTTAACTACAGGGCATACCCGGGTTTGTTTTTCTTTGTTCCTGGTGTTCTGTTCTTaGAAAAGTTGTCTCTCGATG | + |
|
Preference number: 4 (lower is better) Translates to: VLRNALTTGHTRVCFSLFLVFCS*KSCLSM Trigger: CATCGAGAGACAACTTTTTCAAGAACAGAACACCAG...GAACAAAGAAAAACAAACCCGGGTATGCCCTGTAGTTAAAGCATTCCTGAGAAC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000200469.5 |
||
| 3UTR CAA 72 bp | TATCACATCTGCTGTGAATTTATGAATACTGTGGTTTaGTCCTGCCTGGAAGACTCTGTTTCATTCTGGTCC | + |
|
Preference number: 4 (lower is better) Translates to: YHICCEFMNTVV*SCLEDSVSFWS Trigger: GGACCAGAATGAAACAGAGTCTTCCAGGCAGGACAAAACCACAGTATTCATAAATTCACAGCAGATGTGATA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000196964.2 |
||
| 3UTR CAA 72 bp | ACTGAAGCGTTCTGTTTCTGTCTTAACTTCTCTAGCTaGTCTTCATACGCTGCTTGTGTCTACAGCAAATTG | + |
|
Preference number: 4 (lower is better) Translates to: TEAFCFCLNFSS*SSYAACVYSKL Trigger: CAATTTGCTGTAGACACAAGCAGCGTATGAAGACAAGCTAGAGAAGTTAAGACAGAAACAGAACGCTTCAGT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000196964.2 |
||
| 3UTR CAA 72 bp | GGAACCCAAAGGAAAGGATGGAAGATAAAACTAACCTaGGTCTTGCAATTTTCCATGGTCTCAATTGAGTGC | + |
|
Preference number: 4 (lower is better) Translates to: GTQRKGWKIKLT*VLQFSMVSIEC Trigger: GCACTCAATTGAGACCATGGAAAATTGCAAGACCAAGGTTAGTTTTATCTTCCATCCTTTCCTTTGGGTTCC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000196964.2 |
||
| CDS-3UTR TCA 90 bp | ATGAACTCCCTCCCACACCATGTTAAAATGTTGACTGGTTTGATCTTGTCCAGGAGAAGTACTTTGCAGTaGCCAGTTTTCAGTTGTATT | + |
|
Preference number: 4 (lower is better) Translates to: MNSLPHHVKMLTGLILSRRSTLQ*PVFSCI Trigger: AATACAACTGAAAACTGGTCACTGCAAAGTACTTCT...CCTGGACAAGATCAAACCAGTCAACATTTTAACATGGTGTGGGAGGGAGTTCAT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000196964.2 |
||
| CDS-3UTR CCA 90 bp | TCCTCACATTCCTCTTTATCTTTATGGTCAAGCTGTTCTCAGGAATGCTTTAACACTGGTCAGAAGCCTTaGTCTTGCAATTTTCCATGG | + |
|
Preference number: 4 (lower is better) Translates to: SSHSSLSLWSSCSQECFNTGQKP*SCNFPW Trigger: CCATGGAAAATTGCAAGACCAAGGCTTCTGACCAGT...GTTAAAGCATTCCTGAGAACAGCTTGACCATAAAGATAAAGAGGAATGTGAGGA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000200469.5 |
||
| CDS-3UTR TCA 90 bp | CAAACATCAGCAGAAAAATTACATGTACGTGCAGATCAGGGTGTCAGAGTTCTGAGAAGTACTTTGCAGTaGCCAGTTTTCAGTTGTATT | + |
|
Preference number: 4 (lower is better) Translates to: QTSAEKLHVRADQGVRVLRSTLQ*PVFSCI Trigger: AATACAACTGAAAACTGGTCACTGCAAAGTACTTCT...CAGAACTCTGACACCCTGATCTGCACGTACATGTAATTTTTCTGCTGATGTTTG 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000200469.5 |
||
| CDS-3UTR TCA 90 bp | CAGAGGTCTGACTTAGGAAGCATGATTTCGCCTGAGAAACTTCTTGGAATGAAATCATTCTCCACTGTTTaGAGTTTCTCTAGAAGTACT | + |
|
Preference number: 4 (lower is better) Translates to: QRSDLGSMISPEKLLGMKSFSTV*SFSRST Trigger: AGTACTTCTAGAGAAACTTCAAACAGTGGAGAATGA...TTTCATTCCAAGAAGTTTCTCAGGCGAAATCATGCTTCCTAAGTCAGACCTCTG 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000196964.2 |
||
| 3UTR CAA 72 bp | ATCAAACTGACTTCTAATGACTTACCATCATGTCCATaGATTAATGCATCTCCTCAACCCTCATGGGAAAGC | + |
|
Preference number: 4 (lower is better) Translates to: IKLTSNDLPSCP*INASPQPSWES Trigger: GCTTTCCCATGAGGGTTGAGGAGATGCATTAATCAATGGACATGATGGTAAGTCATTAGAAGTCAGTTTGAT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000196964.2 |
||
| CDS-3UTR TCA 90 bp | ATTCCTCTTTATCTTTATGGTCAAGCTGTTCTCAGGAATGCTTTAACTACAGGGTCTGCAAGAATAGGTTaGCTTGTTTTAACTTTCCCA | + |
|
Preference number: 4 (lower is better) Translates to: IPLYLYGQAVLRNALTTGSARIG*LVLTFP Trigger: TGGGAAAGTTAAAACAAGTCAACCTATTCTTGCAGA...CCCTGTAGTTAAAGCATTCCTGAGAACAGCTTGACCATAAAGATAAAGAGGAAT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000200469.5 |
||
| CDS-3UTR GCA 90 bp | TCACATTCCTCTTTATCTTTATGGTCAAGCTGTTCTCAGGAATGCTTTAACTACTTTCCCACCAATTCCTaGTTTGTCTTCTCTTCGATT | + |
|
Preference number: 4 (lower is better) Translates to: SHSSLSLWSSCSQECFNYFPTNS*FVFSSI Trigger: AATCGAAGAGAAGACAAAGCAGGAATTGGTGGGAAA...GTAGTTAAAGCATTCCTGAGAACAGCTTGACCATAAAGATAAAGAGGAATGTGA 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000200469.5 |
||
| CDS-3UTR CCA 90 bp | TCACATTCCTCTTTATCTTTATGGTCAAGCTGTTCTCAGGAATGCTTTAACTACTCTTGCAATTTTCCATaGTCTCAATTGAGTGCCAGA | + |
|
Preference number: 4 (lower is better) Translates to: SHSSLSLWSSCSQECFNYSCNFP*SQLSAR Trigger: TCTGGCACTCAATTGAGACCATGGAAAATTGCAAGA...GTAGTTAAAGCATTCCTGAGAACAGCTTGACCATAAAGATAAAGAGGAATGTGA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000200469.5 |
||
| CDS-3UTR CCA 90 bp | TCACATTCCTCTTTATCTTTATGGTCAAGCTGTTCTCAGGAATGCTTTAACTACAGAGATGTAGATATTTaGCAGATGCAGATTCCAATT | + |
|
Preference number: 4 (lower is better) Translates to: SHSSLSLWSSCSQECFNYRDVDI*QMQIPI Trigger: AATTGGAATCTGCATCTGCCAAATATCTACATCTCT...GTAGTTAAAGCATTCCTGAGAACAGCTTGACCATAAAGATAAAGAGGAATGTGA 36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000200469.5 |
||
| CDS-3UTR CAA 90 bp | TCACAGGTGTGGGGCCATCCACTAAACATGGTTGACTTTCTAGGAGCCACACCCAGGCTACCAGAATCTTaGCATTCCAGGCTGAGACGT | + |
|
Preference number: 5 (lower is better) Translates to: SQVWGHPLNMVDFLGATPRLPES*HSRLRR Trigger: ACGTCTCAGCCTGGAATGCAAAGATTCTGGTAGCCT...GGGTGTGGCTCCTAGAAAGTCAACCATGTTTAGTGGATGGCCCCACACCTGTGA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000196964.2 |
||
| CDS-3UTR CAA 90 bp | CCCTTGGTGTCAGACAAGGCCATCCTCTGCTACATATGCAGCTGGAGCCATGGGTCTGGTGTTCTGTTCTaGAAAAAGTTGTCTCTCGAT | + |
|
Preference number: 5 (lower is better) Translates to: PLVSDKAILCYICSWSHGSGVLF*KKLSLD Trigger: ATCGAGAGACAACTTTTTCAAGAACAGAACACCAGA...CCCATGGCTCCAGCTGCATATGTAGCAGAGGATGGCCTTGTCTGACACCAAGGG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000196964.2 |
||
| CDS-3UTR CAA 90 bp | TTCAAACATCAGCAGAAAAATTACATGTACGTGCAGATCAGGGTGTCAGAGTTCGCTCCAGGGCAGGCCTaGTGTCCACCATGCTGTATT | + |
|
Preference number: 5 (lower is better) Translates to: FKHQQKNYMYVQIRVSEFAPGQA*CPPCCI Trigger: AATACAGCATGGTGGACACAAGGCCTGCCCTGGAGC...GAACTCTGACACCCTGATCTGCACGTACATGTAATTTTTCTGCTGATGTTTGAA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000200469.5 |
||
| CDS-3UTR CAA 90 bp | CAGGCAGCCTCTAGGCTCACAAACAACCAGCAATTTCTGAGTACTTTATATGTCAGGCTACCAGAATCTTaGCATTCCAGGCTGAGACGT | + |
|
Preference number: 5 (lower is better) Translates to: QAASRLTNNQQFLSTLYVRLPES*HSRLRR Trigger: ACGTCTCAGCCTGGAATGCAAAGATTCTGGTAGCCT...GACATATAAAGTACTCAGAAATTGCTGGTTGTTTGTGAGCCTAGAGGCTGCCTG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000200469.5 |
||
| CDS-3UTR CAA 90 bp | CTGACAGTGACCACGACAGCCACAGGATCCAGGTATAAGCTCAAGCCAGAAGAACTGTTCTTGAAAAAGTaGTCTCTCGATGCAGTTTCT | + |
|
Preference number: 5 (lower is better) Translates to: LTVTTTATGSRYKLKPEELFLKK*SLDAVS Trigger: AGAAACTGCATCGAGAGACAACTTTTTCAAGAACAG...TTCTTCTGGCTTGAGCTTATACCTGGATCCTGTGGCTGTCGTGGTCACTGTCAG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000196964.2 |
||
| CDS-3UTR CAA 90 bp | CAGCCCCAGGCAGCCTCTAGGCTCACAAACAACCAGCAATTTCTGAGTACTTTAGTTTGTGAAGGTGATTaGCCAGAATCTCATCCTGTA | + |
|
Preference number: 5 (lower is better) Translates to: QPQAASRLTNNQQFLSTLVCEGD*PESHPV Trigger: TACAGGATGAGATTCTGGCAAATCACCTTCACAAAC...TAAAGTACTCAGAAATTGCTGGTTGTTTGTGAGCCTAGAGGCTGCCTGGGGCTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000200469.5 |
||
| CDS GCA 90 bp | TGGTCAGAAGCCTTGGTCTTGCAATTTTCCATGGTCTCAATTGAGTaGCAGAGGTCTGACTTAGGAAGCATGATTTCGCCTGAGAAACTT | + |
|
Preference number: 5 (lower is better) Translates to: WSEALVLQFSMVSIE*QRSDLGSMISPEKL Trigger: AAGTTTCTCAGGCGAAATCATGCTTCCTAAGTCAGACCTCTGGCACTCAATTGAGACCATGGAAAATTGCAAGACCAAGGCTTCTGACCA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000166644.8 ENSMUST00000200469.5 |
||
| CDS-3UTR CAA 90 bp | CTGACAGTGACCACGACAGCCACAGGATCCAGGTATAAGCTCAAGCCAGAAGAAAAAGTAAACCTTACATaGCAGAGTTCTTGTCCTTGT | + |
|
Preference number: 5 (lower is better) Translates to: LTVTTTATGSRYKLKPEEKVNLT*QSSCPC Trigger: ACAAGGACAAGAACTCTGCAATGTAAGGTTTACTTT...TTCTTCTGGCTTGAGCTTATACCTGGATCCTGTGGCTGTCGTGGTCACTGTCAG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000196964.2 |
||
| CDS-3UTR CAA 90 bp | CAAACATCAGCAGAAAAATTACATGTACGTGCAGATCAGGGTGTCAGAGTTCTGCTCTCCAGGAGAAGTTaGGTTTTGACCTCTGCCAGT | + |
|
Preference number: 5 (lower is better) Translates to: QTSAEKLHVRADQGVRVLLSRRS*VLTSAS Trigger: ACTGGCAGAGGTCAAAACCAAACTTCTCCTGGAGAG...CAGAACTCTGACACCCTGATCTGCACGTACATGTAATTTTTCTGCTGATGTTTG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000200469.5 |
||
| CDS-3UTR CAA 90 bp | AACATCAGCAGAAAAATTACATGTACGTGCAGATCAGGGTGTCAGAGTTCTGTGTCAGAAGCCTTGGTCTaGCAATTTTCCATGGTCTCA | + |
|
Preference number: 5 (lower is better) Translates to: NISRKITCTCRSGCQSSVSEALV*QFSMVS Trigger: TGAGACCATGGAAAATTGCAAGACCAAGGCTTCTGA...CACAGAACTCTGACACCCTGATCTGCACGTACATGTAATTTTTCTGCTGATGTT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000200469.5 |
||
| CDS-3UTR CAA 90 bp | AACATCAGCAGAAAAATTACATGTACGTGCAGATCAGGGTGTCAGAGTTCTGTGAACTGGTCAGAAGCCTaGGTCTTGCAATTTTCCATG | + |
|
Preference number: 5 (lower is better) Translates to: NISRKITCTCRSGCQSSVNWSEA*VLQFSM Trigger: CATGGAAAATTGCAAGACCAAGGCTTCTGACCAGTT...CACAGAACTCTGACACCCTGATCTGCACGTACATGTAATTTTTCTGCTGATGTT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000200469.5 |
||
| CDS-3UTR CAA 90 bp | TCCTCACATTCCTCTTTATCTTTATGGTCAAGCTGTTCTCAGGAATGCTTTAACCCACCAATTCCTGCTTaGTCTTCTCTTCGATTTCCC | + |
|
Preference number: 5 (lower is better) Translates to: SSHSSLSLWSSCSQECFNPPIPA*SSLRFP Trigger: GGGAAATCGAAGAGAAGACAAAGCAGGAATTGGTGG...GTTAAAGCATTCCTGAGAACAGCTTGACCATAAAGATAAAGAGGAATGTGAGGA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000200469.5 |
||
| CDS GCA 90 bp | TTCTGTCTTAACTTCTCTAGCTTGTCTTCATACGCTGCTTGTGTCTaGAAGAATAGGTTGACTTGTTTTAACTTTCCCACCAATTCCTGC | + |
|
Preference number: 5 (lower is better) Translates to: FCLNFSSLSSYAACV*KNRLTCFNFPTNSC Trigger: GCAGGAATTGGTGGGAAAGTTAAAACAAGTCAACCTATTCTTGCAGACACAAGCAGCGTATGAAGACAAGCTAGAGAAGTTAAGACAGAA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000166644.8 ENSMUST00000200469.5 |
||
| CDS-3UTR CAA 90 bp | CAAACATCAGCAGAAAAATTACATGTACGTGCAGATCAGGGTGTCAGAGTTCTGAAAGTAAACCTTACATaGCAGAGTTCTTGTCCTTGT | + |
|
Preference number: 5 (lower is better) Translates to: QTSAEKLHVRADQGVRVLKVNLT*QSSCPC Trigger: ACAAGGACAAGAACTCTGCAATGTAAGGTTTACTTT...CAGAACTCTGACACCCTGATCTGCACGTACATGTAATTTTTCTGCTGATGTTTG 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000200469.5 |
||
| CDS-3UTR CAA 90 bp | ATAAAGCAGCTTGCAACACGAGAAGTAGAAGCATACATAAAATGTGCACACACAGTTTGTGAAGGTGATTaGCCAGAATCTCATCCTGTA | + |
|
Preference number: 5 (lower is better) Translates to: IKQLATREVEAYIKCAHTVCEGD*PESHPV Trigger: TACAGGATGAGATTCTGGCAAATCACCTTCACAAAC...TGTGTGTGCACATTTTATGTATGCTTCTACTTCTCGTGTTGCAAGCTGCTTTAT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000196964.2 |
||
| CDS-3UTR CAA 90 bp | CATTCCTCTTTATCTTTATGGTCAAGCTGTTCTCAGGAATGCTTTAACTACAGGCTTAACTTCTCTAGCTaGTCTTCATACGCTGCTTGT | + |
|
Preference number: 5 (lower is better) Translates to: HSSLSLWSSCSQECFNYRLNFSS*SSYAAC Trigger: ACAAGCAGCGTATGAAGACAAGCTAGAGAAGTTAAG...CCTGTAGTTAAAGCATTCCTGAGAACAGCTTGACCATAAAGATAAAGAGGAATG 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000200469.5 |
||
| CDS-3UTR CAA 90 bp | TCACATTCCTCTTTATCTTTATGGTCAAGCTGTTCTCAGGAATGCTTTAACTACTCTGGTGTTCTGTTCTaGAAAAAGTTGTCTCTCGAT | + |
|
Preference number: 5 (lower is better) Translates to: SHSSLSLWSSCSQECFNYSGVLF*KKLSLD Trigger: ATCGAGAGACAACTTTTTCAAGAACAGAACACCAGA...GTAGTTAAAGCATTCCTGAGAACAGCTTGACCATAAAGATAAAGAGGAATGTGA 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000200469.5 |
||
| CDS GCA 72 bp | GCAGAGTTCTTGTCCTTGTTGGAGTTGTTCACGTGCTaGGTCTGCAAGCTTCTTACGGAGTCCGTTGACTTC | + |
|
Preference number: 6 (lower is better) Translates to: AEFLSLLELFTC*VCKLLTESVDF Trigger: GAAGTCAACGGACTCCGTAAGAAGCTTGCAGACGCAGCACGTGAACAACTCCAACAAGGACAAGAACTCTGC 51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000166644.8 ENSMUST00000196964.2 ENSMUST00000200469.5 |
||
| CDS GCA 72 bp | GCCTTGGTCTTGCAATTTTCCATGGTCTCAATTGAGTaGCAGAGGTCTGACTTAGGAAGCATGATTTCGCCT | + |
|
Preference number: 6 (lower is better) Translates to: ALVLQFSMVSIE*QRSDLGSMISP Trigger: AGGCGAAATCATGCTTCCTAAGTCAGACCTCTGGCACTCAATTGAGACCATGGAAAATTGCAAGACCAAGGC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000166644.8 ENSMUST00000200469.5 |
||
| CDS CAA 72 bp | ACTGAAGCGTTCTGTTTCTGTCTTAACTTCTCTAGCTaGTCTTCATACGCTGCTTGTGTCTGCAAGAATAGG | + |
|
Preference number: 6 (lower is better) Translates to: TEAFCFCLNFSS*SSYAACVCKNR Trigger: CCTATTCTTGCAGACACAAGCAGCGTATGAAGACAAGCTAGAGAAGTTAAGACAGAAACAGAACGCTTCAGT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000166644.8 ENSMUST00000200469.5 |
||
| CDS GCA 72 bp | AACTTCTCTAGCTTGTCTTCATACGCTGCTTGTGTCTaGAAGAATAGGTTGACTTGTTTTAACTTTCCCACC | + |
|
Preference number: 6 (lower is better) Translates to: NFSSLSSYAACV*KNRLTCFNFPT Trigger: GGTGGGAAAGTTAAAACAAGTCAACCTATTCTTGCAGACACAAGCAGCGTATGAAGACAAGCTAGAGAAGTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000166644.8 ENSMUST00000200469.5 |
||