Pregenerated sensors for CCDC138 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000038010Ensembl transcript IDs: ENSMUST00000036576.10
Found 86 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS-3UTR CCA 90 bp | TACCTTAAACTGAAACATTCTAAAACAGCCATACCTTCTACGGGTCTCATTTACCTGGGAAGGCTTGGCTaGTGGCTTTCCCCCATCTAC | + |
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Preference number: 4 (lower is better) Translates to: YLKLKHSKTAIPSTGLIYLGRLG*WLSPIY Trigger: GTAGATGGGGGAAAGCCACCAGCCAAGCCTTCCCAG...GTAAATGAGACCCGTAGAAGGTATGGCTGTTTTAGAATGTTTCAGTTTAAGGTA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000036576.10 |
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| CDS-3UTR TCA 90 bp | TACCTTAAACTGAAACATTCTAAAACAGCCATACCTTCTACGGGTCTCATTTACGGCCGTAGCGGCTTTTaGGACGCTCCACTACCATAT | + |
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Preference number: 4 (lower is better) Translates to: YLKLKHSKTAIPSTGLIYGRSGF*DAPLPY Trigger: ATATGGTAGTGGAGCGTCTCAAAAGCCGCTACGGCC...GTAAATGAGACCCGTAGAAGGTATGGCTGTTTTAGAATGTTTCAGTTTAAGGTA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000036576.10 |
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| CDS-3UTR GCA 90 bp | TACCTTAAACTGAAACATTCTAAAACAGCCATACCTTCTACGGGTCTCATTTACCTTACGAACGGCTCGTaGAGTTTGGCGCTCACTAGC | + |
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Preference number: 4 (lower is better) Translates to: YLKLKHSKTAIPSTGLIYLTNGS*SLALTS Trigger: GCTAGTGAGCGCCAAACTGCACGAGCCGTTCGTAAG...GTAAATGAGACCCGTAGAAGGTATGGCTGTTTTAGAATGTTTCAGTTTAAGGTA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000036576.10 |
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| CDS-3UTR GCA 90 bp | TACCTTAAACTGAAACATTCTAAAACAGCCATACCTTCTACGGGTCTCATTTACGATGCCATAGTTGATTaGCGTGCGCTGGCATCCAGC | + |
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Preference number: 4 (lower is better) Translates to: YLKLKHSKTAIPSTGLIYDAIVD*RALASS Trigger: GCTGGATGCCAGCGCACGGCAATCAACTATGGCATC...GTAAATGAGACCCGTAGAAGGTATGGCTGTTTTAGAATGTTTCAGTTTAAGGTA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000036576.10 |
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| CDS-3UTR CCA 90 bp | TACCTTAAACTGAAACATTCTAAAACAGCCATACCTTCTACGGGTCTCATTTACTTCTCTGGGAAGGCTTaGCTGGTGGCTTTCCCCCAT | + |
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Preference number: 4 (lower is better) Translates to: YLKLKHSKTAIPSTGLIYFSGKA*LVAFPH Trigger: ATGGGGGAAAGCCACCAGCCAAGCCTTCCCAGAGAA...GTAAATGAGACCCGTAGAAGGTATGGCTGTTTTAGAATGTTTCAGTTTAAGGTA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000036576.10 |
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| CDS-3UTR GCA 90 bp | TACCTTAAACTGAAACATTCTAAAACAGCCATACCTTCTACGGGTCTCATTTACGGCATCCACTGGAGCTaGTCTGTCATCATAGGCAAC | + |
|
Preference number: 4 (lower is better) Translates to: YLKLKHSKTAIPSTGLIYGIHWS*SVIIGN Trigger: GTTGCCTATGATGACAGAGCAGCTCCAGTGGATGCC...GTAAATGAGACCCGTAGAAGGTATGGCTGTTTTAGAATGTTTCAGTTTAAGGTA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000036576.10 |
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| CDS-3UTR TCA 90 bp | TACCTTAAACTGAAACATTCTAAAACAGCCATACCTTCTACGGGTCTCATTTACGCAAGCTGGAGCTCTTaGAGAACACTGCTGTCTTTG | + |
|
Preference number: 4 (lower is better) Translates to: YLKLKHSKTAIPSTGLIYASWSS*RTLLSL Trigger: CAAAGACAGCAGTGTTCTTCAAGAGCTCCAGCTTGC...GTAAATGAGACCCGTAGAAGGTATGGCTGTTTTAGAATGTTTCAGTTTAAGGTA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000036576.10 |
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| CDS-3UTR GCA 90 bp | TACCTTAAACTGAAACATTCTAAAACAGCCATACCTTCTACGGGTCTCATTTACGCTTCCAGGAATGGCTaGAGGGACTTTGACTCTACT | + |
|
Preference number: 4 (lower is better) Translates to: YLKLKHSKTAIPSTGLIYASRNG*RDFDST Trigger: AGTAGAGTCAAAGTCCCTGCAGCCATTCCTGGAAGC...GTAAATGAGACCCGTAGAAGGTATGGCTGTTTTAGAATGTTTCAGTTTAAGGTA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000036576.10 |
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| CDS-3UTR CCA 90 bp | TACCTTAAACTGAAACATTCTAAAACAGCCATACCTTCTACGGGTCTCATTTACACTAGCGGCATCCACTaGAGCTGCTCTGTCATCATA | + |
|
Preference number: 4 (lower is better) Translates to: YLKLKHSKTAIPSTGLIYTSGIH*SCSVII Trigger: TATGATGACAGAGCAGCTCCAGTGGATGCCGCTAGT...GTAAATGAGACCCGTAGAAGGTATGGCTGTTTTAGAATGTTTCAGTTTAAGGTA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000036576.10 |
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| CDS-3UTR TCA 90 bp | TACCTTAAACTGAAACATTCTAAAACAGCCATACCTTCTACGGGTCTCATTTACGAAAGTTCATGCTGTTaGTTCATCAGAGCAGCCCAC | + |
|
Preference number: 4 (lower is better) Translates to: YLKLKHSKTAIPSTGLIYESSCC*FIRAAH Trigger: GTGGGCTGCTCTGATGAATCAACAGCATGAACTTTC...GTAAATGAGACCCGTAGAAGGTATGGCTGTTTTAGAATGTTTCAGTTTAAGGTA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000036576.10 |
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| CDS-3UTR TCA 90 bp | TACCTTAAACTGAAACATTCTAAAACAGCCATACCTTCTACGGGTCTCATTTACCAAACCCTGCTTCTTTaGCACTTTGGGTCTTGGGTA | + |
|
Preference number: 4 (lower is better) Translates to: YLKLKHSKTAIPSTGLIYQTLLL*HFGSWV Trigger: TACCCAAGACCCAAAGTGTCAAAGAAGCAGGGTTTG...GTAAATGAGACCCGTAGAAGGTATGGCTGTTTTAGAATGTTTCAGTTTAAGGTA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000036576.10 |
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| CDS-3UTR TCA 90 bp | TACCTTAAACTGAAACATTCTAAAACAGCCATACCTTCTACGGGTCTCATTTACAGGCAGTTTCATGGCTaGAAAGCAGCTGTTCTCGTT | + |
|
Preference number: 4 (lower is better) Translates to: YLKLKHSKTAIPSTGLIYRQFHG*KAAVLV Trigger: AACGAGAACAGCTGCTTTTCAGCCATGAAACTGCCT...GTAAATGAGACCCGTAGAAGGTATGGCTGTTTTAGAATGTTTCAGTTTAAGGTA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000036576.10 |
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| CDS-3UTR GCA 90 bp | TACCTTAAACTGAAACATTCTAAAACAGCCATACCTTCTACGGGTCTCATTTACTTGTCCATTGAGTGCTaGCTTGAAGGGTTTTGGAGC | + |
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Preference number: 4 (lower is better) Translates to: YLKLKHSKTAIPSTGLIYLSIEC*LEGFWS Trigger: GCTCCAAAACCCTTCAAGGCAGCACTCAATGGACAA...GTAAATGAGACCCGTAGAAGGTATGGCTGTTTTAGAATGTTTCAGTTTAAGGTA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000036576.10 |
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| CDS-3UTR CCA 90 bp | TACCTTAAACTGAAACATTCTAAAACAGCCATACCTTCTACGGGTCTCATTTACTCAGAGGACTGTCAATaGAACCACTGCAGCATTCAG | + |
|
Preference number: 4 (lower is better) Translates to: YLKLKHSKTAIPSTGLIYSEDCQ*NHCSIQ Trigger: CTGAATGCTGCAGTGGTTCCATTGACAGTCCTCTGA...GTAAATGAGACCCGTAGAAGGTATGGCTGTTTTAGAATGTTTCAGTTTAAGGTA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000036576.10 |
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| CDS-3UTR CCA 90 bp | TACCTTAAACTGAAACATTCTAAAACAGCCATACCTTCTACGGGTCTCATTTACGAGCTTGGACCCTTTTaGCCTGAATCTCCATCTTCT | + |
|
Preference number: 4 (lower is better) Translates to: YLKLKHSKTAIPSTGLIYELGPF*PESPSS Trigger: AGAAGATGGAGATTCAGGCCAAAAGGGTCCAAGCTC...GTAAATGAGACCCGTAGAAGGTATGGCTGTTTTAGAATGTTTCAGTTTAAGGTA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000036576.10 |
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| CDS-3UTR TCA 90 bp | TACCTTAAACTGAAACATTCTAAAACAGCCATACCTTCTACGGGTCTCATTTACTGGACCCTTTTGGCCTaGATCTCCATCTTCTTGTTT | + |
|
Preference number: 4 (lower is better) Translates to: YLKLKHSKTAIPSTGLIYWTLLA*ISIFLF Trigger: AAACAAGAAGATGGAGATTCAGGCCAAAAGGGTCCA...GTAAATGAGACCCGTAGAAGGTATGGCTGTTTTAGAATGTTTCAGTTTAAGGTA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000036576.10 |
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| CDS-3UTR GCA 90 bp | TACCTTAAACTGAAACATTCTAAAACAGCCATACCTTCTACGGGTCTCATTTACATACAGAGAAAGGCGTaGTCTGGATGTGTTGTCCTT | + |
|
Preference number: 4 (lower is better) Translates to: YLKLKHSKTAIPSTGLIYIQRKA*SGCVVL Trigger: AAGGACAACACATCCAGAGCACGCCTTTCTCTGTAT...GTAAATGAGACCCGTAGAAGGTATGGCTGTTTTAGAATGTTTCAGTTTAAGGTA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000036576.10 |
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| CDS-3UTR CCA 90 bp | TACCTTAAACTGAAACATTCTAAAACAGCCATACCTTCTACGGGTCTCATTTACCTCAAGGCAGTTTCATaGCTGAAAAGCAGCTGTTCT | + |
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Preference number: 4 (lower is better) Translates to: YLKLKHSKTAIPSTGLIYLKAVS*LKSSCS Trigger: AGAACAGCTGCTTTTCAGCCATGAAACTGCCTTGAG...GTAAATGAGACCCGTAGAAGGTATGGCTGTTTTAGAATGTTTCAGTTTAAGGTA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000036576.10 |
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| CDS-3UTR CCA 90 bp | TACCTTAAACTGAAACATTCTAAAACAGCCATACCTTCTACGGGTCTCATTTACGAGAAAGGCGTGCTCTaGATGTGTTGTCCTTTGTAT | + |
|
Preference number: 4 (lower is better) Translates to: YLKLKHSKTAIPSTGLIYEKGVL*MCCPLY Trigger: ATACAAAGGACAACACATCCAGAGCACGCCTTTCTC...GTAAATGAGACCCGTAGAAGGTATGGCTGTTTTAGAATGTTTCAGTTTAAGGTA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000036576.10 |
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| CDS-3UTR TCA 90 bp | TACCTTAAACTGAAACATTCTAAAACAGCCATACCTTCTACGGGTCTCATTTACGAGGCACCATCTCTATaGTCATCTTCCATTAATTCC | + |
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Preference number: 4 (lower is better) Translates to: YLKLKHSKTAIPSTGLIYEAPSL*SSSINS Trigger: GGAATTAATGGAAGATGATCATAGAGATGGTGCCTC...GTAAATGAGACCCGTAGAAGGTATGGCTGTTTTAGAATGTTTCAGTTTAAGGTA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000036576.10 |
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| CDS-3UTR GCA 90 bp | TACCTTAAACTGAAACATTCTAAAACAGCCATACCTTCTACGGGTCTCATTTACGAACACTGCTGTCTTTaGTTTGTTCTCCACAGAATG | + |
|
Preference number: 4 (lower is better) Translates to: YLKLKHSKTAIPSTGLIYEHCCL*FVLHRM Trigger: CATTCTGTGGAGAACAAAGCAAAGACAGCAGTGTTC...GTAAATGAGACCCGTAGAAGGTATGGCTGTTTTAGAATGTTTCAGTTTAAGGTA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000036576.10 |
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| CDS-3UTR GCA 90 bp | TACCTTAAACTGAAACATTCTAAAACAGCCATACCTTCTACGGGTCTCATTTACGCTCTTGAAGAACACTaGTGTCTTTGCTTTGTTCTC | + |
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Preference number: 4 (lower is better) Translates to: YLKLKHSKTAIPSTGLIYALEEH*CLCFVL Trigger: GAGAACAAAGCAAAGACAGCAGTGTTCTTCAAGAGC...GTAAATGAGACCCGTAGAAGGTATGGCTGTTTTAGAATGTTTCAGTTTAAGGTA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000036576.10 |
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| CDS-3UTR TCA 90 bp | TACCTTAAACTGAAACATTCTAAAACAGCCATACCTTCTACGGGTCTCATTTACTTGTCAAACCCAGGTTaGACAGAGTTGAATTCAGAT | + |
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Preference number: 4 (lower is better) Translates to: YLKLKHSKTAIPSTGLIYLSNPG*TELNSD Trigger: ATCTGAATTCAACTCTGTTCAACCTGGGTTTGACAA...GTAAATGAGACCCGTAGAAGGTATGGCTGTTTTAGAATGTTTCAGTTTAAGGTA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000036576.10 |
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| CDS-3UTR GCA 90 bp | TACCTTAAACTGAAACATTCTAAAACAGCCATACCTTCTACGGGTCTCATTTACTCTCCTTTCAGTCTCTaGACTGTCATAAACTCATAC | + |
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Preference number: 4 (lower is better) Translates to: YLKLKHSKTAIPSTGLIYSPFSL*TVINSY Trigger: GTATGAGTTTATGACAGTGCAGAGACTGAAAGGAGA...GTAAATGAGACCCGTAGAAGGTATGGCTGTTTTAGAATGTTTCAGTTTAAGGTA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000036576.10 |
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| CDS-3UTR TCA 90 bp | TACCTTAAACTGAAACATTCTAAAACAGCCATACCTTCTACGGGTCTCATTTACAGTCTGGTCAAAATCTaGAAGTTCATGCTGTTGATT | + |
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Preference number: 4 (lower is better) Translates to: YLKLKHSKTAIPSTGLIYSLVKI*KFMLLI Trigger: AATCAACAGCATGAACTTTCAGATTTTGACCAGACT...GTAAATGAGACCCGTAGAAGGTATGGCTGTTTTAGAATGTTTCAGTTTAAGGTA 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000036576.10 |
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| CDS-3UTR TCA 90 bp | TACCTTAAACTGAAACATTCTAAAACAGCCATACCTTCTACGGGTCTCATTTACTCACATTTAAATGTTTaGAGGAACTGCAGAAAGGTG | + |
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Preference number: 4 (lower is better) Translates to: YLKLKHSKTAIPSTGLIYSHLNV*RNCRKV Trigger: CACCTTTCTGCAGTTCCTTCAAACATTTAAATGTGA...GTAAATGAGACCCGTAGAAGGTATGGCTGTTTTAGAATGTTTCAGTTTAAGGTA 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000036576.10 |
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| CDS-3UTR TCA 90 bp | TACCTTAAACTGAAACATTCTAAAACAGCCATACCTTCTACGGGTCTCATTTACTGCTCCTTTAAAATCTaGAATCTTGTCAGAACCTCT | + |
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Preference number: 4 (lower is better) Translates to: YLKLKHSKTAIPSTGLIYCSFKI*NLVRTS Trigger: AGAGGTTCTGACAAGATTTCAGATTTTAAAGGAGCA...GTAAATGAGACCCGTAGAAGGTATGGCTGTTTTAGAATGTTTCAGTTTAAGGTA 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000036576.10 |
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| CDS-3UTR TCA 90 bp | TACCTTAAACTGAAACATTCTAAAACAGCCATACCTTCTACGGGTCTCATTTACGCTTCTTGTTACTCTTaGTTTTGGAAAGCTTCTGTA | + |
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Preference number: 4 (lower is better) Translates to: YLKLKHSKTAIPSTGLIYASCYS*FWKASV Trigger: TACAGAAGCTTTCCAAAATCAAGAGTAACAAGAAGC...GTAAATGAGACCCGTAGAAGGTATGGCTGTTTTAGAATGTTTCAGTTTAAGGTA 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000036576.10 |
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| CDS-3UTR TCA 90 bp | TACCTTAAACTGAAACATTCTAAAACAGCCATACCTTCTACGGGTCTCATTTACCAGGTTGAACAGAGTTaGATTCAGATTAATACAGAG | + |
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Preference number: 4 (lower is better) Translates to: YLKLKHSKTAIPSTGLIYQVEQS*IQINTE Trigger: CTCTGTATTAATCTGAATTCAACTCTGTTCAACCTG...GTAAATGAGACCCGTAGAAGGTATGGCTGTTTTAGAATGTTTCAGTTTAAGGTA 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000036576.10 |
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| CDS-3UTR GCA 90 bp | TACCTTAAACTGAAACATTCTAAAACAGCCATACCTTCTACGGGTCTCATTTACTGCAAATTTCTTCTGTaGTGTAGTTTCATACTGCAG | + |
|
Preference number: 4 (lower is better) Translates to: YLKLKHSKTAIPSTGLIYCKFLL*CSFILQ Trigger: CTGCAGTATGAAACTACAGCACAGAAGAAATTTGCA...GTAAATGAGACCCGTAGAAGGTATGGCTGTTTTAGAATGTTTCAGTTTAAGGTA 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000036576.10 |
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| CDS-3UTR CCA 90 bp | TACCTTAAACTGAAACATTCTAAAACAGCCATACCTTCTACGGGTCTCATTTACACTGCTTTGTTATTTTaGAGGCACCATCTCTATGAT | + |
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Preference number: 4 (lower is better) Translates to: YLKLKHSKTAIPSTGLIYTALLF*RHHLYD Trigger: ATCATAGAGATGGTGCCTCCAAAATAACAAAGCAGT...GTAAATGAGACCCGTAGAAGGTATGGCTGTTTTAGAATGTTTCAGTTTAAGGTA 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000036576.10 |
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| CDS-3UTR GCA 90 bp | TACCTTAAACTGAAACATTCTAAAACAGCCATACCTTCTACGGGTCTCATTTACGCTGTAGTTTCATACTaGAGTTTCATATGTATATGG | + |
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Preference number: 4 (lower is better) Translates to: YLKLKHSKTAIPSTGLIYAVVSY*SFICIW Trigger: CCATATACATATGAAACTGCAGTATGAAACTACAGC...GTAAATGAGACCCGTAGAAGGTATGGCTGTTTTAGAATGTTTCAGTTTAAGGTA 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000036576.10 |
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| CDS-3UTR CCA 90 bp | TACCTTAAACTGAAACATTCTAAAACAGCCATACCTTCTACGGGTCTCATTTACTTGATTTATTTCATGTaGAAGCAAACCCTGCTTCTT | + |
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Preference number: 4 (lower is better) Translates to: YLKLKHSKTAIPSTGLIYLIYFM*KQTLLL Trigger: AAGAAGCAGGGTTTGCTTCCACATGAAATAAATCAA...GTAAATGAGACCCGTAGAAGGTATGGCTGTTTTAGAATGTTTCAGTTTAAGGTA 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000036576.10 |
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| CDS-3UTR CCA 90 bp | TACCTTAAACTGAAACATTCTAAAACAGCCATACCTTCTACGGGTCTCATTTACATTACTGGAATGGCTTaGTACTCCAAAAATAAGGTT | + |
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Preference number: 4 (lower is better) Translates to: YLKLKHSKTAIPSTGLIYITGMA*YSKNKV Trigger: AACCTTATTTTTGGAGTACCAAGCCATTCCAGTAAT...GTAAATGAGACCCGTAGAAGGTATGGCTGTTTTAGAATGTTTCAGTTTAAGGTA 36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000036576.10 |
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| CDS-3UTR CCA 90 bp | TACCTTAAACTGAAACATTCTAAAACAGCCATACCTTCTACGGGTCTCATTTACTTAGGATTACTGGAATaGCTTGGTACTCCAAAAATA | + |
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Preference number: 4 (lower is better) Translates to: YLKLKHSKTAIPSTGLIYLGLLE*LGTPKI Trigger: TATTTTTGGAGTACCAAGCCATTCCAGTAATCCTAA...GTAAATGAGACCCGTAGAAGGTATGGCTGTTTTAGAATGTTTCAGTTTAAGGTA 36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000036576.10 |
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| CDS-3UTR CCA 90 bp | TACCTTAAACTGAAACATTCTAAAACAGCCATACCTTCTACGGGTCTCATTTACATAAGAGCCCTTTACTaGATATTCTCAGGTGTTTTA | + |
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Preference number: 4 (lower is better) Translates to: YLKLKHSKTAIPSTGLIYIRALY*IFSGVL Trigger: TAAAACACCTGAGAATATCCAGTAAAGGGCTCTTAT...GTAAATGAGACCCGTAGAAGGTATGGCTGTTTTAGAATGTTTCAGTTTAAGGTA 36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000036576.10 |
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| 3UTR CAA 72 bp | TGTAACCCTATTGCTTTGAATTCTAACCCTGATGCCTaGAATTCTGGAAAAGTCATCTTGTACATTAGTATT | + |
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Preference number: 4 (lower is better) Translates to: CNPIALNSNPDA*NSGKVILYISI Trigger: AATACTAATGTACAAGATGACTTTTCCAGAATTCAAGGCATCAGGGTTAGAATTCAAAGCAATAGGGTTACA 35% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000036576.10 |
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| CDS CCA 90 bp | CTTACGAACGGCTCGTGCAGTTTGGCGCTCACTAGCGGCATCCACTaGAGCTGCTCTGTCATCATAGGCAACAGCTTTACACATTTCTCT | + |
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Preference number: 5 (lower is better) Translates to: LTNGSCSLALTSGIH*SCSVIIGNSFTHFS Trigger: AGAGAAATGTGTAAAGCTGTTGCCTATGATGACAGAGCAGCTCCAGTGGATGCCGCTAGTGAGCGCCAAACTGCACGAGCCGTTCGTAAG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000036576.10 |
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| CDS CCA 90 bp | TACACATTTCTCTTGAATGTCACTTCTCTGGGAAGGCTTGGCTGGTaGCTTTCCCCCATCTACACCAGGTTCCTCAGGCTCCACTTTGCT | + |
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Preference number: 5 (lower is better) Translates to: YTFLLNVTSLGRLGW*LSPIYTRFLRLHFA Trigger: AGCAAAGTGGAGCCTGAGGAACCTGGTGTAGATGGGGGAAAGCCACCAGCCAAGCCTTCCCAGAGAAGTGACATTCAAGAGAAATGTGTA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000036576.10 |
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| CDS TCA 90 bp | CAGGCTTCCAGGAATGGCTGCAGGGACTTTGACTCTACTGTCATCTaGAGCAGGCTGTCGATGACATTGGATAAGAGCCCTTTACTGGAT | + |
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Preference number: 5 (lower is better) Translates to: QASRNGCRDFDSTVI*SRLSMTLDKSPLLD Trigger: ATCCAGTAAAGGGCTCTTATCCAATGTCATCGACAGCCTGCTTCAGATGACAGTAGAGTCAAAGTCCCTGCAGCCATTCCTGGAAGCCTG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000036576.10 |
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| CDS CCA 90 bp | TTTCCCCCATCTACACCAGGTTCCTCAGGCTCCACTTTGCTAAGGTaGCAGTCTGATATCCAATCCATGAAAACAGTGAGCAGCTCGTAC | + |
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Preference number: 5 (lower is better) Translates to: FPPSTPGSSGSTLLR*QSDIQSMKTVSSSY Trigger: GTACGAGCTGCTCACTGTTTTCATGGATTGGATATCAGACTGCCACCTTAGCAAAGTGGAGCCTGAGGAACCTGGTGTAGATGGGGGAAA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000036576.10 |
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| CDS TCA 90 bp | ATCTACACCAGGTTCCTCAGGCTCCACTTTGCTAAGGTGGCAGTCTaGTATCCAATCCATGAAAACAGTGAGCAGCTCGTACACTTGTCC | + |
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Preference number: 5 (lower is better) Translates to: IYTRFLRLHFAKVAV*YPIHENSEQLVHLS Trigger: GGACAAGTGTACGAGCTGCTCACTGTTTTCATGGATTGGATATCAGACTGCCACCTTAGCAAAGTGGAGCCTGAGGAACCTGGTGTAGAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000036576.10 |
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| CDS-3UTR CAA 90 bp | TACCTTAAACTGAAACATTCTAAAACAGCCATACCTTCTACGGGTCTCATTTACCTTCTCTGGGAAGGCTaGGCTGGTGGCTTTCCCCCA | + |
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Preference number: 5 (lower is better) Translates to: YLKLKHSKTAIPSTGLIYLLWEG*AGGFPP Trigger: TGGGGGAAAGCCACCAGCCAAGCCTTCCCAGAGAAG...GTAAATGAGACCCGTAGAAGGTATGGCTGTTTTAGAATGTTTCAGTTTAAGGTA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000036576.10 |
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| CDS CCA 90 bp | TTTGATTTATTTCATGTGGAAGCAAACCCTGCTTCTTTGACACTTTaGGTCTTGGGTACACGGCCTGCTTCAGAGGACTGTCAATGGAAC | + |
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Preference number: 5 (lower is better) Translates to: FDLFHVEANPASLTL*VLGTRPASEDCQWN Trigger: GTTCCATTGACAGTCCTCTGAAGCAGGCCGTGTACCCAAGACCCAAAGTGTCAAAGAAGCAGGGTTTGCTTCCACATGAAATAAATCAAA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000036576.10 |
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| CDS-3UTR CAA 90 bp | TACCTTAAACTGAAACATTCTAAAACAGCCATACCTTCTACGGGTCTCATTTACCCATTGAGTGCTGCCTaGAAGGGTTTTGGAGCTGGG | + |
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Preference number: 5 (lower is better) Translates to: YLKLKHSKTAIPSTGLIYPLSAA*KGFGAG Trigger: CCCAGCTCCAAAACCCTTCAAGGCAGCACTCAATGG...GTAAATGAGACCCGTAGAAGGTATGGCTGTTTTAGAATGTTTCAGTTTAAGGTA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000036576.10 |
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| CDS TCA 90 bp | ATCATATATTTGATTTATTTCATGTGGAAGCAAACCCTGCTTCTTTaGCACTTTGGGTCTTGGGTACACGGCCTGCTTCAGAGGACTGTC | + |
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Preference number: 5 (lower is better) Translates to: IIYLIYFMWKQTLLL*HFGSWVHGLLQRTV Trigger: GACAGTCCTCTGAAGCAGGCCGTGTACCCAAGACCCAAAGTGTCAAAGAAGCAGGGTTTGCTTCCACATGAAATAAATCAAATATATGAT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000036576.10 |
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| CDS TCA 90 bp | GGACAATTAAGGTTGATAAGAATCTCAGTGGCAAGCTGGAGCTCTTaGAGAACACTGCTGTCTTTGCTTTGTTCTCCACAGAATGCTCTA | + |
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Preference number: 5 (lower is better) Translates to: GQLRLIRISVASWSS*RTLLSLLCSPQNAL Trigger: TAGAGCATTCTGTGGAGAACAAAGCAAAGACAGCAGTGTTCTTCAAGAGCTCCAGCTTGCCACTGAGATTCTTATCAACCTTAATTGTCC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000036576.10 |
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| CDS-3UTR CAA 90 bp | TACCTTAAACTGAAACATTCTAAAACAGCCATACCTTCTACGGGTCTCATTTACTGCTTCTTTGACACTTaGGGTCTTGGGTACACGGCC | + |
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Preference number: 5 (lower is better) Translates to: YLKLKHSKTAIPSTGLIYCFFDT*GLGYTA Trigger: GGCCGTGTACCCAAGACCCAAAGTGTCAAAGAAGCA...GTAAATGAGACCCGTAGAAGGTATGGCTGTTTTAGAATGTTTCAGTTTAAGGTA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000036576.10 |
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| CDS-3UTR CAA 90 bp | TACCTTAAACTGAAACATTCTAAAACAGCCATACCTTCTACGGGTCTCATTTACTCCTCAGGCTCCACTTaGCTAAGGTGGCAGTCTGAT | + |
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Preference number: 5 (lower is better) Translates to: YLKLKHSKTAIPSTGLIYSSGST*LRWQSD Trigger: ATCAGACTGCCACCTTAGCAAAGTGGAGCCTGAGGA...GTAAATGAGACCCGTAGAAGGTATGGCTGTTTTAGAATGTTTCAGTTTAAGGTA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000036576.10 |
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| CDS TCA 90 bp | AGTGACCAGGGAGTTACATTTTGTCAAACCCAGGTTGAACAGAGTTaGATTCAGATTAATACAGAGAAAGGCGTGCTCTGGATGTGTTGT | + |
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Preference number: 5 (lower is better) Translates to: SDQGVTFCQTQVEQS*IQINTEKGVLWMCC Trigger: ACAACACATCCAGAGCACGCCTTTCTCTGTATTAATCTGAATTCAACTCTGTTCAACCTGGGTTTGACAAAATGTAACTCCCTGGTCACT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000036576.10 |
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| CDS-3UTR CAA 90 bp | TACCTTAAACTGAAACATTCTAAAACAGCCATACCTTCTACGGGTCTCATTTACGCAAACCCTGCTTCTTaGACACTTTGGGTCTTGGGT | + |
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Preference number: 5 (lower is better) Translates to: YLKLKHSKTAIPSTGLIYANPAS*TLWVLG Trigger: ACCCAAGACCCAAAGTGTCAAAGAAGCAGGGTTTGC...GTAAATGAGACCCGTAGAAGGTATGGCTGTTTTAGAATGTTTCAGTTTAAGGTA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000036576.10 |
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| CDS-3UTR CAA 90 bp | TACCTTAAACTGAAACATTCTAAAACAGCCATACCTTCTACGGGTCTCATTTACGGCAAGCTGGAGCTCTaGAAGAACACTGCTGTCTTT | + |
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Preference number: 5 (lower is better) Translates to: YLKLKHSKTAIPSTGLIYGKLEL*KNTAVF Trigger: AAAGACAGCAGTGTTCTTCAAGAGCTCCAGCTTGCC...GTAAATGAGACCCGTAGAAGGTATGGCTGTTTTAGAATGTTTCAGTTTAAGGTA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000036576.10 |
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| CDS TCA 90 bp | GAAAAGAATCCAGTTCATCATCTAGGCAGTTCACATTTAAATGTTTaGAGGAACTGCAGAAAGGTGGAGTCGGATGATTCCTTCCATCAG | + |
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Preference number: 5 (lower is better) Translates to: EKNPVHHLGSSHLNV*RNCRKVESDDSFHQ Trigger: CTGATGGAAGGAATCATCCGACTCCACCTTTCTGCAGTTCCTTCAAACATTTAAATGTGAACTGCCTAGATGATGAACTGGATTCTTTTC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000036576.10 |
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| CDS-3UTR CAA 90 bp | TACCTTAAACTGAAACATTCTAAAACAGCCATACCTTCTACGGGTCTCATTTACATGGCTGCAGGGACTTaGACTCTACTGTCATCTGAA | + |
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Preference number: 5 (lower is better) Translates to: YLKLKHSKTAIPSTGLIYMAAGT*TLLSSE Trigger: TTCAGATGACAGTAGAGTCAAAGTCCCTGCAGCCAT...GTAAATGAGACCCGTAGAAGGTATGGCTGTTTTAGAATGTTTCAGTTTAAGGTA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000036576.10 |
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| CDS TCA 90 bp | GCTGTCTTTGCTTTGTTCTCCACAGAATGCTCTAAAGAATTATCCTaGGTTCCTTTCATTGTAACTCCTTTAAATACGTCTTCCCCCAAT | + |
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Preference number: 5 (lower is better) Translates to: AVFALFSTECSKELS*VPFIVTPLNTSSPN Trigger: ATTGGGGGAAGACGTATTTAAAGGAGTTACAATGAAAGGAACTCAGGATAATTCTTTAGAGCATTCTGTGGAGAACAAAGCAAAGACAGC 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000036576.10 |
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| CDS-3UTR CAA 90 bp | TACCTTAAACTGAAACATTCTAAAACAGCCATACCTTCTACGGGTCTCATTTACGGGCCTTTTCTTGTTTaGAACTCTTCACTTCATGAG | + |
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Preference number: 5 (lower is better) Translates to: YLKLKHSKTAIPSTGLIYGPFLV*NSSLHE Trigger: CTCATGAAGTGAAGAGTTCAAAACAAGAAAAGGCCC...GTAAATGAGACCCGTAGAAGGTATGGCTGTTTTAGAATGTTTCAGTTTAAGGTA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000036576.10 |
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| CDS-3UTR CAA 90 bp | TACCTTAAACTGAAACATTCTAAAACAGCCATACCTTCTACGGGTCTCATTTACTTCACACCTTTAATTTaGCTCAAGGCAGTTTCATGG | + |
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Preference number: 5 (lower is better) Translates to: YLKLKHSKTAIPSTGLIYFTPLI*LKAVSW Trigger: CCATGAAACTGCCTTGAGCAAAATTAAAGGTGTGAA...GTAAATGAGACCCGTAGAAGGTATGGCTGTTTTAGAATGTTTCAGTTTAAGGTA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000036576.10 |
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| CDS-3UTR CAA 90 bp | TACCTTAAACTGAAACATTCTAAAACAGCCATACCTTCTACGGGTCTCATTTACAGCTTCTTGTTACTCTaGATTTTGGAAAGCTTCTGT | + |
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Preference number: 5 (lower is better) Translates to: YLKLKHSKTAIPSTGLIYSFLLL*ILESFC Trigger: ACAGAAGCTTTCCAAAATCAAGAGTAACAAGAAGCT...GTAAATGAGACCCGTAGAAGGTATGGCTGTTTTAGAATGTTTCAGTTTAAGGTA 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000036576.10 |
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| CDS TCA 90 bp | TCAGTTAAGTGTTCAATTTCCGTACCATGTTGCTCCTTTAAAATCTaGAATCTTGTCAGAACCTCTTCTTTCACACCTTTAATTTTGCTC | + |
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Preference number: 5 (lower is better) Translates to: SVKCSISVPCCSFKI*NLVRTSSFTPLILL Trigger: GAGCAAAATTAAAGGTGTGAAAGAAGAGGTTCTGACAAGATTTCAGATTTTAAAGGAGCAACATGGTACGGAAATTGAACACTTAACTGA 36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000036576.10 |
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| CDS TCA 72 bp | CCACGGGGCACCTTCCCGCCAGGCCGTAGCGGCTTTTaGGACGCTCCACTACCATATCCTGTCCCGGTGGCT | + |
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Preference number: 6 (lower is better) Translates to: PRGTFPPGRSGF*DAPLPYPVPVA Trigger: AGCCACCGGGACAGGATATGGTAGTGGAGCGTCTCAAAAGCCGCTACGGCCTGGCGGGAAGGTGCCCCGTGG 65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000036576.10 |
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| CDS CCA 72 bp | GTCTTGGGTACACGGCCTGCTTCAGAGGACTGTCAATaGAACCACTGCAGCATTCAGTCTCAAGGCCTGAGG | + |
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Preference number: 6 (lower is better) Translates to: VLGTRPASEDCQ*NHCSIQSQGLR Trigger: CCTCAGGCCTTGAGACTGAATGCTGCAGTGGTTCCATTGACAGTCCTCTGAAGCAGGCCGTGTACCCAAGAC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000036576.10 |
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| CDS CCA 72 bp | CTCTTGAATGTCACTTCTCTGGGAAGGCTTGGCTGGTaGCTTTCCCCCATCTACACCAGGTTCCTCAGGCTC | + |
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Preference number: 6 (lower is better) Translates to: LLNVTSLGRLGW*LSPIYTRFLRL Trigger: GAGCCTGAGGAACCTGGTGTAGATGGGGGAAAGCCACCAGCCAAGCCTTCCCAGAGAAGTGACATTCAAGAG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000036576.10 |
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| CDS GCA 72 bp | TCCCCCAATCTCCTCAATGTTGATGCCATAGTTGATTaGCGTGCGCTGGCATCCAGCTGCCTCAGAGACCAA | + |
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Preference number: 6 (lower is better) Translates to: SPNLLNVDAIVD*RALASSCLRDQ Trigger: TTGGTCTCTGAGGCAGCTGGATGCCAGCGCACGGCAATCAACTATGGCATCAACATTGAGGAGATTGGGGGA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000036576.10 |
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| CDS CAA 72 bp | GTGGAAGCAAACCCTGCTTCTTTGACACTTTGGGTCTaGGGTACACGGCCTGCTTCAGAGGACTGTCAATGG | + |
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Preference number: 6 (lower is better) Translates to: VEANPASLTLWV*GTRPASEDCQW Trigger: CCATTGACAGTCCTCTGAAGCAGGCCGTGTACCCAAGACCCAAAGTGTCAAAGAAGCAGGGTTTGCTTCCAC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000036576.10 |
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| CDS GCA 72 bp | TGCTTCTTTGACACTTTGGGTCTTGGGTACACGGCCTaGTTCAGAGGACTGTCAATGGAACCACTGCAGCAT | + |
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Preference number: 6 (lower is better) Translates to: CFFDTLGLGYTA*FRGLSMEPLQH Trigger: ATGCTGCAGTGGTTCCATTGACAGTCCTCTGAAGCAGGCCGTGTACCCAAGACCCAAAGTGTCAAAGAAGCA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000036576.10 |
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| CDS GCA 72 bp | TGCAGTTTGGCGCTCACTAGCGGCATCCACTGGAGCTaGTCTGTCATCATAGGCAACAGCTTTACACATTTC | + |
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Preference number: 6 (lower is better) Translates to: CSLALTSGIHWS*SVIIGNSFTHF Trigger: GAAATGTGTAAAGCTGTTGCCTATGATGACAGAGCAGCTCCAGTGGATGCCGCTAGTGAGCGCCAAACTGCA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000036576.10 |
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| CDS CCA 72 bp | TTTCATGTGGAAGCAAACCCTGCTTCTTTGACACTTTaGGTCTTGGGTACACGGCCTGCTTCAGAGGACTGT | + |
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Preference number: 6 (lower is better) Translates to: FHVEANPASLTL*VLGTRPASEDC Trigger: ACAGTCCTCTGAAGCAGGCCGTGTACCCAAGACCCAAAGTGTCAAAGAAGCAGGGTTTGCTTCCACATGAAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000036576.10 |
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| CDS CAA 72 bp | ATTTCATGTGGAAGCAAACCCTGCTTCTTTGACACTTaGGGTCTTGGGTACACGGCCTGCTTCAGAGGACTG | + |
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Preference number: 6 (lower is better) Translates to: ISCGSKPCFFDT*GLGYTACFRGL Trigger: CAGTCCTCTGAAGCAGGCCGTGTACCCAAGACCCAAAGTGTCAAAGAAGCAGGGTTTGCTTCCACATGAAAT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000036576.10 |
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| CDS CAA 90 bp | TTATTTCATGTGGAAGCAAACCCTGCTTCTTTGACACTTTGGGTCTaGGGTACACGGCCTGCTTCAGAGGACTGTCAATGGAACCACTGC | + |
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Preference number: 6 (lower is better) Translates to: LFHVEANPASLTLWV*GTRPASEDCQWNHC Trigger: GCAGTGGTTCCATTGACAGTCCTCTGAAGCAGGCCGTGTACCCAAGACCCAAAGTGTCAAAGAAGCAGGGTTTGCTTCCACATGAAATAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000036576.10 |
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| CDS TCA 72 bp | AGGTTCCTCAGGCTCCACTTTGCTAAGGTGGCAGTCTaGTATCCAATCCATGAAAACAGTGAGCAGCTCGTA | + |
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Preference number: 6 (lower is better) Translates to: RFLRLHFAKVAV*YPIHENSEQLV Trigger: TACGAGCTGCTCACTGTTTTCATGGATTGGATATCAGACTGCCACCTTAGCAAAGTGGAGCCTGAGGAACCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000036576.10 |
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| CDS CAA 72 bp | TTTCCCCCATCTACACCAGGTTCCTCAGGCTCCACTTaGCTAAGGTGGCAGTCTGATATCCAATCCATGAAA | + |
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Preference number: 6 (lower is better) Translates to: FPPSTPGSSGST*LRWQSDIQSMK Trigger: TTTCATGGATTGGATATCAGACTGCCACCTTAGCAAAGTGGAGCCTGAGGAACCTGGTGTAGATGGGGGAAA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000036576.10 |
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| CDS CAA 72 bp | TATCCAATCCATGAAAACAGTGAGCAGCTCGTACACTaGTCCATTGAGTGCTGCCTTGAAGGGTTTTGGAGC | + |
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Preference number: 6 (lower is better) Translates to: YPIHENSEQLVH*SIECCLEGFWS Trigger: GCTCCAAAACCCTTCAAGGCAGCACTCAATGGACAAGTGTACGAGCTGCTCACTGTTTTCATGGATTGGATA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000036576.10 |
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| CDS TCA 72 bp | TTGATTTATTTCATGTGGAAGCAAACCCTGCTTCTTTaGCACTTTGGGTCTTGGGTACACGGCCTGCTTCAG | + |
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Preference number: 6 (lower is better) Translates to: LIYFMWKQTLLL*HFGSWVHGLLQ Trigger: CTGAAGCAGGCCGTGTACCCAAGACCCAAAGTGTCAAAGAAGCAGGGTTTGCTTCCACATGAAATAAATCAA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000036576.10 |
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| CDS CAA 90 bp | TGCAGAAAGGTGGAGTCGGATGATTCCTTCCATCAGAGTAATATCTaGGTGAGGAACCCACTTTATCTCCAGAGCTGTAAGTATCTAAAC | + |
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Preference number: 6 (lower is better) Translates to: CRKVESDDSFHQSNI*VRNPLYLQSCKYLN Trigger: GTTTAGATACTTACAGCTCTGGAGATAAAGTGGGTTCCTCACCAAGATATTACTCTGATGGAAGGAATCATCCGACTCCACCTTTCTGCA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000036576.10 |
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| CDS CAA 90 bp | CATCATATATTTGATTTATTTCATGTGGAAGCAAACCCTGCTTCTTaGACACTTTGGGTCTTGGGTACACGGCCTGCTTCAGAGGACTGT | + |
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Preference number: 6 (lower is better) Translates to: HHIFDLFHVEANPAS*TLWVLGTRPASEDC Trigger: ACAGTCCTCTGAAGCAGGCCGTGTACCCAAGACCCAAAGTGTCAAAGAAGCAGGGTTTGCTTCCACATGAAATAAATCAAATATATGATG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000036576.10 |
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| CDS CAA 90 bp | AGGACAATTAAGGTTGATAAGAATCTCAGTGGCAAGCTGGAGCTCTaGAAGAACACTGCTGTCTTTGCTTTGTTCTCCACAGAATGCTCT | + |
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Preference number: 6 (lower is better) Translates to: RTIKVDKNLSGKLEL*KNTAVFALFSTECS Trigger: AGAGCATTCTGTGGAGAACAAAGCAAAGACAGCAGTGTTCTTCAAGAGCTCCAGCTTGCCACTGAGATTCTTATCAACCTTAATTGTCCT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000036576.10 |
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| CDS TCA 72 bp | TATTTAGTCTGGTCAAAATCTGAAAGTTCATGCTGTTaGTTCATCAGAGCAGCCCACACACCAGTCATGTCG | + |
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Preference number: 6 (lower is better) Translates to: YLVWSKSESSCC*FIRAAHTPVMS Trigger: CGACATGACTGGTGTGTGGGCTGCTCTGATGAATCAACAGCATGAACTTTCAGATTTTGACCAGACTAAATA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000036576.10 |
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| CDS TCA 72 bp | AGTCGGATGATTCCTTCCATCAGAGTAATATCTTGGTaGGGAACCCACTTTATCTCCAGAGCTGTAAGTATC | + |
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Preference number: 6 (lower is better) Translates to: SRMIPSIRVISW*GTHFISRAVSI Trigger: GATACTTACAGCTCTGGAGATAAAGTGGGTTCCTCACCAAGATATTACTCTGATGGAAGGAATCATCCGACT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000036576.10 |
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| CDS TCA 72 bp | CCAGTTCATCATCTAGGCAGTTCACATTTAAATGTTTaGAGGAACTGCAGAAAGGTGGAGTCGGATGATTCC | + |
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Preference number: 6 (lower is better) Translates to: PVHHLGSSHLNV*RNCRKVESDDS Trigger: GGAATCATCCGACTCCACCTTTCTGCAGTTCCTTCAAACATTTAAATGTGAACTGCCTAGATGATGAACTGG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000036576.10 |
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| CDS TCA 72 bp | ACTTTGACTCTACTGTCATCTGAAGCAGGCTGTCGATaGCATTGGATAAGAGCCCTTTACTGGATATTCTCA | + |
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Preference number: 6 (lower is better) Translates to: TLTLLSSEAGCR*HWIRALYWIFS Trigger: TGAGAATATCCAGTAAAGGGCTCTTATCCAATGTCATCGACAGCCTGCTTCAGATGACAGTAGAGTCAAAGT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000036576.10 |
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| CDS CAA 90 bp | TGGCTTGTACTAGTGACCAGGGAGTTACATTTTGTCAAACCCAGGTaGAACAGAGTTGAATTCAGATTAATACAGAGAAAGGCGTGCTCT | + |
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Preference number: 6 (lower is better) Translates to: WLVLVTRELHFVKPR*NRVEFRLIQRKACS Trigger: AGAGCACGCCTTTCTCTGTATTAATCTGAATTCAACTCTGTTCAACCTGGGTTTGACAAAATGTAACTCCCTGGTCACTAGTACAAGCCA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000036576.10 |
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| CDS TCA 72 bp | TGTAAGTTATCTAAACGAGCTTGGACCCTTTTGGCCTaGATCTCCATCTTCTTGTTTTCCTCACTTACTTCA | + |
|
Preference number: 6 (lower is better) Translates to: CKLSKRAWTLLA*ISIFLFSSLTS Trigger: TGAAGTAAGTGAGGAAAACAAGAAGATGGAGATTCAGGCCAAAAGGGTCCAAGCTCGTTTAGATAACTTACA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000036576.10 |
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| CDS CAA 72 bp | AATCTTGTCAGAACCTCTTCTTTCACACCTTTAATTTaGCTCAAGGCAGTTTCATGGCTGAAAAGCAGCTGT | + |
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Preference number: 6 (lower is better) Translates to: NLVRTSSFTPLI*LKAVSWLKSSC Trigger: ACAGCTGCTTTTCAGCCATGAAACTGCCTTGAGCAAAATTAAAGGTGTGAAAGAAGAGGTTCTGACAAGATT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000036576.10 |
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| CDS CAA 72 bp | CTAGTGACCAGGGAGTTACATTTTGTCAAACCCAGGTaGAACAGAGTTGAATTCAGATTAATACAGAGAAAG | + |
|
Preference number: 6 (lower is better) Translates to: LVTRELHFVKPR*NRVEFRLIQRK Trigger: CTTTCTCTGTATTAATCTGAATTCAACTCTGTTCAACCTGGGTTTGACAAAATGTAACTCCCTGGTCACTAG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000036576.10 |
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| CDS TCA 72 bp | CACAATTCTTCTTTTATATTTAGTCTGGTCAAAATCTaGAAGTTCATGCTGTTGATTCATCAGAGCAGCCCA | + |
|
Preference number: 6 (lower is better) Translates to: HNSSFIFSLVKI*KFMLLIHQSSP Trigger: TGGGCTGCTCTGATGAATCAACAGCATGAACTTTCAGATTTTGACCAGACTAAATATAAAAGAAGAATTGTG 36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000036576.10 |
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| CDS TCA 72 bp | TGTTCAATTTCCGTACCATGTTGCTCCTTTAAAATCTaGAATCTTGTCAGAACCTCTTCTTTCACACCTTTA | + |
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Preference number: 6 (lower is better) Translates to: CSISVPCCSFKI*NLVRTSSFTPL Trigger: TAAAGGTGTGAAAGAAGAGGTTCTGACAAGATTTCAGATTTTAAAGGAGCAACATGGTACGGAAATTGAACA 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000036576.10 |
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