Pregenerated sensors for CCDC137 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000049957Ensembl transcript IDs: ENSMUST00000058370.14, ENSMUST00000175970.8, ENSMUST00000176120.2
Found 109 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | GTGCTGATTGCCGCCCCCACTTGCCCTTCCACCAGCCCACTAACCTaGTTTGCTGTCTGTCCCTGCCTTCCAAAGGTTGCAGTAAGCCCA | + |
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Preference number: 1 (lower is better) Translates to: VLIAAPTCPSTSPLT*FAVCPCLPKVAVSP Trigger: TGGGCTTACTGCAACCTTTGGAAGGCAGGGACAGACAGCAAAGCAGGTTAGTGGGCTGGTGGAAGGGCAAGTGGGGGCGGCAATCAGCAC 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000058370.14 |
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| 3UTR CCA 90 bp | AATGCACATTTGGAGCACTCCACTAGGCTCCAGGACCAGCTTTGCTaGACGGAGGCTCCTAGGTCTGCTAGAGGACTGTGGGCTTCCCCA | + |
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Preference number: 1 (lower is better) Translates to: NAHLEHSTRLQDQLC*TEAPRSARGLWASP Trigger: TGGGGAAGCCCACAGTCCTCTAGCAGACCTAGGAGCCTCCGTCCAGCAAAGCTGGTCCTGGAGCCTAGTGGAGTGCTCCAAATGTGCATT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000058370.14 |
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| 3UTR TCA 90 bp | GGAGTGGGCAGGGAACAAGAGCAGCCACATCTTCCATACCAGAAGTaGGGAATGGGGAAGCCAGACAGGTGGCTCCACACATCGTTCTGG | + |
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Preference number: 1 (lower is better) Translates to: GVGREQEQPHLPYQK*GMGKPDRWLHTSFW Trigger: CCAGAACGATGTGTGGAGCCACCTGTCTGGCTTCCCCATTCCTCACTTCTGGTATGGAAGATGTGGCTGCTCTTGTTCCCTGCCCACTCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000058370.14 |
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| 3UTR GCA 90 bp | GAAAATGCACATTTGGAGCACTCCACTAGGCTCCAGGACCAGCTTTaGTGGACGGAGGCTCCTAGGTCTGCTAGAGGACTGTGGGCTTCC | + |
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Preference number: 1 (lower is better) Translates to: ENAHLEHSTRLQDQL*WTEAPRSARGLWAS Trigger: GGAAGCCCACAGTCCTCTAGCAGACCTAGGAGCCTCCGTCCAGCAAAGCTGGTCCTGGAGCCTAGTGGAGTGCTCCAAATGTGCATTTTC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000058370.14 |
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| 3UTR GCA 90 bp | TACTCTGATAATGGTGGCTCCTGGGCCCTGGCCCTAGTCCTGATGTaGAGTGGAAAGTCAAGTGGCCGATGCACCCTGCTCTATTCTGGC | + |
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Preference number: 1 (lower is better) Translates to: YSDNGGSWALALVLM*SGKSSGRCTLLYSG Trigger: GCCAGAATAGAGCAGGGTGCATCGGCCACTTGACTTTCCACTGCACATCAGGACTAGGGCCAGGGCCCAGGAGCCACCATTATCAGAGTA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000058370.14 |
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| 3UTR CCA 90 bp | GCAGGGAACAAGAGCAGCCACATCTTCCATACCAGAAGTGAGGAATaGGGAAGCCAGACAGGTGGCTCCACACATCGTTCTGGCCAAGGT | + |
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Preference number: 1 (lower is better) Translates to: AGNKSSHIFHTRSEE*GSQTGGSTHRSGQG Trigger: ACCTTGGCCAGAACGATGTGTGGAGCCACCTGTCTGGCTTCCCCATTCCTCACTTCTGGTATGGAAGATGTGGCTGCTCTTGTTCCCTGC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000058370.14 |
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| 3UTR CCA 90 bp | GTCAGGACTCCAAGATGGCAGCAGAGACCAGACCTGACCTTGGAGTaGGCAGGGAACAAGAGCAGCCACATCTTCCATACCAGAAGTGAG | + |
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Preference number: 1 (lower is better) Translates to: VRTPRWQQRPDLTLE*AGNKSSHIFHTRSE Trigger: CTCACTTCTGGTATGGAAGATGTGGCTGCTCTTGTTCCCTGCCCACTCCAAGGTCAGGTCTGGTCTCTGCTGCCATCTTGGAGTCCTGAC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000058370.14 |
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| 3UTR TCA 90 bp | GGTGTGTGTCTGCACACTCACTCATCTTGTCACATTGACACGCATTaGCTAGGGCCGTGGATAAGCATGTTGGAGAGCAACGGCCCAGAC | + |
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Preference number: 1 (lower is better) Translates to: GVCLHTHSSCHIDTH*LGPWISMLESNGPD Trigger: GTCTGGGCCGTTGCTCTCCAACATGCTTATCCACGGCCCTAGTCAATGCGTGTCAATGTGACAAGATGAGTGAGTGTGCAGACACACACC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000058370.14 |
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| 3UTR CCA 90 bp | TCAAGTGGCCGATGCACCCTGCTCTATTCTGGCCCTTGCTACTGTTaGGTGTGTGTCTGCACACTCACTCATCTTGTCACATTGACACGC | + |
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Preference number: 1 (lower is better) Translates to: SSGRCTLLYSGPCYC*VCVCTLTHLVTLTR Trigger: GCGTGTCAATGTGACAAGATGAGTGAGTGTGCAGACACACACCCAACAGTAGCAAGGGCCAGAATAGAGCAGGGTGCATCGGCCACTTGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000058370.14 |
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| 3UTR GCA 90 bp | AGTGGAAAGTCAAGTGGCCGATGCACCCTGCTCTATTCTGGCCCTTaGTACTGTTGGGTGTGTGTCTGCACACTCACTCATCTTGTCACA | + |
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Preference number: 1 (lower is better) Translates to: SGKSSGRCTLLYSGP*YCWVCVCTLTHLVT Trigger: TGTGACAAGATGAGTGAGTGTGCAGACACACACCCAACAGTAGCAAGGGCCAGAATAGAGCAGGGTGCATCGGCCACTTGACTTTCCACT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000058370.14 |
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| 3UTR CCA 90 bp | GGCACTCAGTCAGTACTGAAACCCCCTCTCTATCCAAACCAAGAGTaGGCTGGGAGTTCTGGTCATTTGTACAGAACCCTGCAGGCAAAT | + |
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Preference number: 1 (lower is better) Translates to: GTQSVLKPPLYPNQE*AGSSGHLYRTLQAN Trigger: ATTTGCCTGCAGGGTTCTGTACAAATGACCAGAACTCCCAGCCCACTCTTGGTTTGGATAGAGAGGGGGTTTCAGTACTGACTGAGTGCC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000058370.14 |
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| 3UTR TCA 90 bp | AAGCCAGACAGGTGGCTCCACACATCGTTCTGGCCAAGGTCAATCTaGGATGGCTTAAGCACAGCAGGAAAACATCCATTTAGCTGGGAT | + |
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Preference number: 1 (lower is better) Translates to: KPDRWLHTSFWPRSI*DGLSTAGKHPFSWD Trigger: ATCCCAGCTAAATGGATGTTTTCCTGCTGTGCTTAAGCCATCTCAGATTGACCTTGGCCAGAACGATGTGTGGAGCCACCTGTCTGGCTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000058370.14 |
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| 3UTR GCA 90 bp | AAGGTTTTTGAGACTCTCTCAACCTGTTCAGGCAGGCCATACATTTaGTTCAAGTCAAGACTGGCTTTGAACACCCAATTCTTTCGCCTC | + |
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Preference number: 1 (lower is better) Translates to: KVFETLSTCSGRPYI*FKSRLALNTQFFRL Trigger: GAGGCGAAAGAATTGGGTGTTCAAAGCCAGTCTTGACTTGAAGCAAATGTATGGCCTGCCTGAACAGGTTGAGAGAGTCTCAAAAACCTT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000058370.14 |
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| 3UTR CCA 90 bp | GTCAAGACTGGCTTTGAACACCCAATTCTTTCGCCTCTACCCTCTTaGTATAAATACTCTACTCTGTCAACCATTGAAACCTGGTTTTCA | + |
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Preference number: 1 (lower is better) Translates to: VKTGFEHPILSPLPS*YKYSTLSTIETWFS Trigger: TGAAAACCAGGTTTCAATGGTTGACAGAGTAGAGTATTTATACCAAGAGGGTAGAGGCGAAAGAATTGGGTGTTCAAAGCCAGTCTTGAC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000058370.14 |
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| 3UTR CCA 90 bp | TGTGAAAAAGCAGCACTCAGAAAACAATCCCTGAATGCATGGGTGTaGGCATCTTTAATAAACATTACAGAAAGTGGGAGGAGTCAAGCA | + |
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Preference number: 1 (lower is better) Translates to: CEKAALRKQSLNAWV*ASLINITESGRSQA Trigger: TGCTTGACTCCTCCCACTTTCTGTAATGTTTATTAAAGATGCCCACACCCATGCATTCAGGGATTGTTTTCTGAGTGCTGCTTTTTCACA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000058370.14 |
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| 3UTR-3UTR CCA 90 bp | AGAAGTGAGGAATGGGGAAGCCAGACAGGTGGCTCCACACATCGTTCTGGCCAATCTGCTAGAGGACTGTaGGCTTCCCCAGCAGGGTCC | + |
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Preference number: 2 (lower is better) Translates to: RSEEWGSQTGGSTHRSGQSARGL*ASPAGS Trigger: GGACCCTGCTGGGGAAGCCCACAGTCCTCTAGCAGA...TTGGCCAGAACGATGTGTGGAGCCACCTGTCTGGCTTCCCCATTCCTCACTTCT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000058370.14 |
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| 3UTR CAA 90 bp | CTGAGGGTCAGGACTCCAAGATGGCAGCAGAGACCAGACCTGACCTaGGAGTGGGCAGGGAACAAGAGCAGCCACATCTTCCATACCAGA | + |
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Preference number: 2 (lower is better) Translates to: LRVRTPRWQQRPDLT*EWAGNKSSHIFHTR Trigger: TCTGGTATGGAAGATGTGGCTGCTCTTGTTCCCTGCCCACTCCAAGGTCAGGTCTGGTCTCTGCTGCCATCTTGGAGTCCTGACCCTCAG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000058370.14 |
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| 3UTR CAA 90 bp | CAGCCCTTCCAGCTGTGTCTCAGGCAAGTGCTGGGATGCGGGGGTTaGCCCTGTATGAGATGGGATACCATGGTGGTCACTCTTATAAGG | + |
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Preference number: 2 (lower is better) Translates to: QPFQLCLRQVLGCGG*PCMRWDTMVVTLIR Trigger: CCTTATAAGAGTGACCACCATGGTATCCCATCTCATACAGGGCAAACCCCCGCATCCCAGCACTTGCCTGAGACACAGCTGGAAGGGCTG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000058370.14 |
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| 3UTR-3UTR CCA 90 bp | AGCTTTGCTGGACGGAGGCTCCTAGGTCTGCTAGAGGACTGTGGGCTTCCCCAGTATCCAAACCAAGAGTaGGCTGGGAGTTCTGGTCAT | + |
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Preference number: 2 (lower is better) Translates to: SFAGRRLLGLLEDCGLPQYPNQE*AGSSGH Trigger: ATGACCAGAACTCCCAGCCCACTCTTGGTTTGGATA...CTGGGGAAGCCCACAGTCCTCTAGCAGACCTAGGAGCCTCCGTCCAGCAAAGCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000058370.14 |
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| 3UTR CAA 90 bp | GTCAAGTGGCCGATGCACCCTGCTCTATTCTGGCCCTTGCTACTGTaGGGTGTGTGTCTGCACACTCACTCATCTTGTCACATTGACACG | + |
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Preference number: 2 (lower is better) Translates to: VKWPMHPALFWPLLL*GVCLHTHSSCHIDT Trigger: CGTGTCAATGTGACAAGATGAGTGAGTGTGCAGACACACACCCAACAGTAGCAAGGGCCAGAATAGAGCAGGGTGCATCGGCCACTTGAC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000058370.14 |
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| 3UTR-3UTR TCA 90 bp | ATGCACATTTGGAGCACTCCACTAGGCTCCAGGACCAGCTTTGCTGGACGGAGGGCTGGATTAAGGGATTaGGTCCATTCTACAGTGGTC | + |
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Preference number: 2 (lower is better) Translates to: MHIWSTPLGSRTSFAGRRAGLRD*VHSTVV Trigger: GACCACTGTAGAATGGACTCAATCCCTTAATCCAGC...CCTCCGTCCAGCAAAGCTGGTCCTGGAGCCTAGTGGAGTGCTCCAAATGTGCAT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000058370.14 |
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| 3UTR-3UTR GCA 90 bp | CATACCAGAAGTGAGGAATGGGGAAGCCAGACAGGTGGCTCCACACATCGTTCTCTGCCTTCCAAAGGTTaGAGTAAGCCCATGGGAGCT | + |
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Preference number: 2 (lower is better) Translates to: HTRSEEWGSQTGGSTHRSLPSKG*SKPMGA Trigger: AGCTCCCATGGGCTTACTGCAACCTTTGGAAGGCAG...AGAACGATGTGTGGAGCCACCTGTCTGGCTTCCCCATTCCTCACTTCTGGTATG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000058370.14 |
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| 3UTR-3UTR CCA 90 bp | TTTAGTGTTCTGAGGGTCAGGACTCCAAGATGGCAGCAGAGACCAGACCTGACCATTCTACAGTGGTCCTaGCTTGTCTCAGCCGAGACT | + |
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Preference number: 2 (lower is better) Translates to: FSVLRVRTPRWQQRPDLTILQWS*LVSAET Trigger: AGTCTCGGCTGAGACAAGCCAGGACCACTGTAGAAT...GGTCAGGTCTGGTCTCTGCTGCCATCTTGGAGTCCTGACCCTCAGAACACTAAA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000058370.14 |
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| 3UTR-3UTR CCA 90 bp | TTTAGTGTTCTGAGGGTCAGGACTCCAAGATGGCAGCAGAGACCAGACCTGACCAGTCCTGATGTGCAGTaGAAAGTCAAGTGGCCGATG | + |
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Preference number: 2 (lower is better) Translates to: FSVLRVRTPRWQQRPDLTSPDVQ*KVKWPM Trigger: CATCGGCCACTTGACTTTCCACTGCACATCAGGACT...GGTCAGGTCTGGTCTCTGCTGCCATCTTGGAGTCCTGACCCTCAGAACACTAAA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000058370.14 |
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| 3UTR-3UTR CCA 90 bp | ATGCACATTTGGAGCACTCCACTAGGCTCCAGGACCAGCTTTGCTGGACGGAGGGCTTCAGTAATTGGCTaGATTAAGGGATTGAGTCCA | + |
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Preference number: 2 (lower is better) Translates to: MHIWSTPLGSRTSFAGRRASVIG*IKGLSP Trigger: TGGACTCAATCCCTTAATCCAGCCAATTACTGAAGC...CCTCCGTCCAGCAAAGCTGGTCCTGGAGCCTAGTGGAGTGCTCCAAATGTGCAT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000058370.14 |
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| 3UTR-3UTR CCA 90 bp | ATGCACATTTGGAGCACTCCACTAGGCTCCAGGACCAGCTTTGCTGGACGGAGGAGCTTCTTAAAACATTaGTGTAGGCTGACCTACACC | + |
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Preference number: 2 (lower is better) Translates to: MHIWSTPLGSRTSFAGRRSFLKH*CRLTYT Trigger: GGTGTAGGTCAGCCTACACCAATGTTTTAAGAAGCT...CCTCCGTCCAGCAAAGCTGGTCCTGGAGCCTAGTGGAGTGCTCCAAATGTGCAT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000058370.14 |
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| 3UTR-3UTR TCA 90 bp | AACAAGAGCAGCCACATCTTCCATACCAGAAGTGAGGAATGGGGAAGCCAGACATGGCCAAGGTCAATCTaGGATGGCTTAAGCACAGCA | + |
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Preference number: 2 (lower is better) Translates to: NKSSHIFHTRSEEWGSQTWPRSI*DGLSTA Trigger: TGCTGTGCTTAAGCCATCTCAGATTGACCTTGGCCA...TGTCTGGCTTCCCCATTCCTCACTTCTGGTATGGAAGATGTGGCTGCTCTTGTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000058370.14 |
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| 3UTR-3UTR GCA 90 bp | CACCAATTATTCAGTAATGATATAATGGTGGACAGGCTCCAGCTTACCTGCCAACCCACTAACCTGCTTTaGTGTCTGTCCCTGCCTTCC | + |
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Preference number: 2 (lower is better) Translates to: HQLFSNDIMVDRLQLTCQPTNLL*CLSLPS Trigger: GGAAGGCAGGGACAGACAGCAAAGCAGGTTAGTGGG...TTGGCAGGTAAGCTGGAGCCTGTCCACCATTATATCATTACTGAATAATTGGTG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000058370.14 |
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| 3UTR-3UTR CCA 90 bp | ATGTCTCCTGCCCCTTACACCATGAAGACCTTTACACACATGAAGACATATATGGGCCCTTGCTACTGTTaGGTGTGTGTCTGCACACTC | + |
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Preference number: 2 (lower is better) Translates to: MSPAPYTMKTFTHMKTYMGPCYC*VCVCTL Trigger: GAGTGTGCAGACACACACCCAACAGTAGCAAGGGCC...CATATATGTCTTCATGTGTGTAAAGGTCTTCATGGTGTAAGGGGCAGGAGACAT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000058370.14 |
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| 3UTR-3UTR CCA 90 bp | CATCAGCATGATAATCTTCTAGGCTCATCTGCTGAGGAAAAACCTGCAGCAGAGCGCACAGTTGAGCTTTaGATGTGTGGCCACATTGCT | + |
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Preference number: 2 (lower is better) Translates to: HQHDNLLGSSAEEKPAAERTVEL*MCGHIA Trigger: AGCAATGTGGCCACACATCCAAAGCTCAACTGTGCG...CTCTGCTGCAGGTTTTTCCTCAGCAGATGAGCCTAGAAGATTATCATGCTGATG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000058370.14 |
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| 3UTR-3UTR CCA 90 bp | AACTTTTATTTCTCATGTACAGGGGTATATGAGGTCCCACAAGTGGACAAGAGAGGGAAGCCAGACAGGTaGCTCCACACATCGTTCTGG | + |
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Preference number: 2 (lower is better) Translates to: NFYFSCTGVYEVPQVDKRGKPDR*LHTSFW Trigger: CCAGAACGATGTGTGGAGCCACCTGTCTGGCTTCCC...TCTCTTGTCCACTTGTGGGACCTCATATACCCCTGTACATGAGAAATAAAAGTT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000058370.14 |
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| 3UTR-3UTR TCA 90 bp | CATCAGCATGATAATCTTCTAGGCTCATCTGCTGAGGAAAAACCTGCAGCAGAGTATAGGCATGGGCTCTaGGGGATAATTACCCAGAGT | + |
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Preference number: 2 (lower is better) Translates to: HQHDNLLGSSAEEKPAAEYRHGL*GIITQS Trigger: ACTCTGGGTAATTATCCCTCAGAGCCCATGCCTATA...CTCTGCTGCAGGTTTTTCCTCAGCAGATGAGCCTAGAAGATTATCATGCTGATG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000058370.14 |
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| 3UTR-3UTR CCA 90 bp | CATACCAGAAGTGAGGAATGGGGAAGCCAGACAGGTGGCTCCACACATCGTTCTTCAACCATTGAAACCTaGTTTTCATGTGTATACCTC | + |
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Preference number: 2 (lower is better) Translates to: HTRSEEWGSQTGGSTHRSSTIET*FSCVYL Trigger: GAGGTATACACATGAAAACCAGGTTTCAATGGTTGA...AGAACGATGTGTGGAGCCACCTGTCTGGCTTCCCCATTCCTCACTTCTGGTATG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000058370.14 |
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| 3UTR-3UTR TCA 90 bp | TGGCTTGTCTCAGCCGAGACTTGTTTCAGAATGAACTTAGGCTCAAGGAAAATAGCACTCTTCCAAACCTaGAAGCTTACTCTCAGGACC | + |
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Preference number: 2 (lower is better) Translates to: WLVSAETCFRMNLGSRKIALFQT*KLTLRT Trigger: GGTCCTGAGAGTAAGCTTTCAGGTTTGGAAGAGTGC...TATTTTCCTTGAGCCTAAGTTCATTCTGAAACAAGTCTCGGCTGAGACAAGCCA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000058370.14 |
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| 3UTR-3UTR CCA 90 bp | CATCAGCATGATAATCTTCTAGGCTCATCTGCTGAGGAAAAACCTGCAGCAGAGAAACCAAGAGTGGGCTaGGAGTTCTGGTCATTTGTA | + |
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Preference number: 2 (lower is better) Translates to: HQHDNLLGSSAEEKPAAEKPRVG*EFWSFV Trigger: TACAAATGACCAGAACTCCCAGCCCACTCTTGGTTT...CTCTGCTGCAGGTTTTTCCTCAGCAGATGAGCCTAGAAGATTATCATGCTGATG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000058370.14 |
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| 3UTR-3UTR CCA 90 bp | CATCAGCATGATAATCTTCTAGGCTCATCTGCTGAGGAAAAACCTGCAGCAGAGAAACATTACAGAAAGTaGGAGGAGTCAAGCACATAT | + |
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Preference number: 2 (lower is better) Translates to: HQHDNLLGSSAEEKPAAEKHYRK*EESSTY Trigger: ATATGTGCTTGACTCCTCCCACTTTCTGTAATGTTT...CTCTGCTGCAGGTTTTTCCTCAGCAGATGAGCCTAGAAGATTATCATGCTGATG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000058370.14 |
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| 3UTR-3UTR CCA 90 bp | AACTTTTATTTCTCATGTACAGGGGTATATGAGGTCCCACAAGTGGACAAGAGATCGCCTCTACCCTCTTaGTATAAATACTCTACTCTG | + |
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Preference number: 2 (lower is better) Translates to: NFYFSCTGVYEVPQVDKRSPLPS*YKYSTL Trigger: CAGAGTAGAGTATTTATACCAAGAGGGTAGAGGCGA...TCTCTTGTCCACTTGTGGGACCTCATATACCCCTGTACATGAGAAATAAAAGTT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000058370.14 |
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| 3UTR GCA 72 bp | GCCGCCCCCACTTGCCCTTCCACCAGCCCACTAACCTaGTTTGCTGTCTGTCCCTGCCTTCCAAAGGTTGCA | + |
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Preference number: 3 (lower is better) Translates to: AAPTCPSTSPLT*FAVCPCLPKVA Trigger: TGCAACCTTTGGAAGGCAGGGACAGACAGCAAAGCAGGTTAGTGGGCTGGTGGAAGGGCAAGTGGGGGCGGC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000058370.14 |
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| 3UTR CCA 72 bp | TGCTGGACGGAGGCTCCTAGGTCTGCTAGAGGACTGTaGGCTTCCCCAGCAGGGTCCAAGCTTCGCTCTTTT | + |
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Preference number: 3 (lower is better) Translates to: CWTEAPRSARGL*ASPAGSKLRSF Trigger: AAAAGAGCGAAGCTTGGACCCTGCTGGGGAAGCCCACAGTCCTCTAGCAGACCTAGGAGCCTCCGTCCAGCA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000058370.14 |
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| 3UTR CCA 72 bp | TTGGAGCACTCCACTAGGCTCCAGGACCAGCTTTGCTaGACGGAGGCTCCTAGGTCTGCTAGAGGACTGTGG | + |
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Preference number: 3 (lower is better) Translates to: LEHSTRLQDQLC*TEAPRSARGLW Trigger: CCACAGTCCTCTAGCAGACCTAGGAGCCTCCGTCCAGCAAAGCTGGTCCTGGAGCCTAGTGGAGTGCTCCAA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000058370.14 |
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| 3UTR GCA 72 bp | CATTTGGAGCACTCCACTAGGCTCCAGGACCAGCTTTaGTGGACGGAGGCTCCTAGGTCTGCTAGAGGACTG | + |
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Preference number: 3 (lower is better) Translates to: HLEHSTRLQDQL*WTEAPRSARGL Trigger: CAGTCCTCTAGCAGACCTAGGAGCCTCCGTCCAGCAAAGCTGGTCCTGGAGCCTAGTGGAGTGCTCCAAATG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000058370.14 |
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| 3UTR-3UTR CAA 90 bp | AACAAGAGCAGCCACATCTTCCATACCAGAAGTGAGGAATGGGGAAGCCAGACAGATTGCCGCCCCCACTaGCCCTTCCACCAGCCCACT | + |
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Preference number: 3 (lower is better) Translates to: NKSSHIFHTRSEEWGSQTDCRPH*PFHQPT Trigger: AGTGGGCTGGTGGAAGGGCAAGTGGGGGCGGCAATC...TGTCTGGCTTCCCCATTCCTCACTTCTGGTATGGAAGATGTGGCTGCTCTTGTT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000058370.14 |
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| 3UTR GCA 72 bp | CCCCACTTGCCCTTCCACCAGCCCACTAACCTGCTTTaGTGTCTGTCCCTGCCTTCCAAAGGTTGCAGTAAG | + |
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Preference number: 3 (lower is better) Translates to: PHLPFHQPTNLL*CLSLPSKGCSK Trigger: CTTACTGCAACCTTTGGAAGGCAGGGACAGACAGCAAAGCAGGTTAGTGGGCTGGTGGAAGGGCAAGTGGGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000058370.14 |
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| 3UTR CCA 72 bp | CCTGGCCCTAGTCCTGATGTGCAGTGGAAAGTCAAGTaGCCGATGCACCCTGCTCTATTCTGGCCCTTGCTA | + |
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Preference number: 3 (lower is better) Translates to: PGPSPDVQWKVK*PMHPALFWPLL Trigger: TAGCAAGGGCCAGAATAGAGCAGGGTGCATCGGCCACTTGACTTTCCACTGCACATCAGGACTAGGGCCAGG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000058370.14 |
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| 3UTR TCA 72 bp | AGGGAACAAGAGCAGCCACATCTTCCATACCAGAAGTaGGGAATGGGGAAGCCAGACAGGTGGCTCCACACA | + |
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Preference number: 3 (lower is better) Translates to: REQEQPHLPYQK*GMGKPDRWLHT Trigger: TGTGTGGAGCCACCTGTCTGGCTTCCCCATTCCTCACTTCTGGTATGGAAGATGTGGCTGCTCTTGTTCCCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000058370.14 |
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| 3UTR TCA 72 bp | GGAAAAACCTGCAGCAGAGCAGTACATCAGGGTGCCTaGTTTTCAACCAGGACAAAGTGGAGAGGGCTGGGG | + |
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Preference number: 3 (lower is better) Translates to: GKTCSRAVHQGA*FSTRTKWRGLG Trigger: CCCCAGCCCTCTCCACTTTGTCCTGGTTGAAAATCAGGCACCCTGATGTACTGCTCTGCTGCAGGTTTTTCC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000058370.14 |
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| 3UTR GCA 72 bp | TCAAGTGGCCGATGCACCCTGCTCTATTCTGGCCCTTaGTACTGTTGGGTGTGTGTCTGCACACTCACTCAT | + |
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Preference number: 3 (lower is better) Translates to: SSGRCTLLYSGP*YCWVCVCTLTH Trigger: ATGAGTGAGTGTGCAGACACACACCCAACAGTAGCAAGGGCCAGAATAGAGCAGGGTGCATCGGCCACTTGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000058370.14 |
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| 3UTR CCA 72 bp | ACTCAGAAGCCTACATACTCTGATAATGGTGGCTCCTaGGCCCTGGCCCTAGTCCTGATGTGCAGTGGAAAG | + |
|
Preference number: 3 (lower is better) Translates to: TQKPTYSDNGGS*ALALVLMCSGK Trigger: CTTTCCACTGCACATCAGGACTAGGGCCAGGGCCCAGGAGCCACCATTATCAGAGTATGTAGGCTTCTGAGT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000058370.14 |
||
| 3UTR-3UTR CAA 90 bp | AGCTTTGCTGGACGGAGGCTCCTAGGTCTGCTAGAGGACTGTGGGCTTCCCCAGCTACTCTGTCAACCATaGAAACCTGGTTTTCATGTG | + |
|
Preference number: 3 (lower is better) Translates to: SFAGRRLLGLLEDCGLPQLLCQP*KPGFHV Trigger: CACATGAAAACCAGGTTTCAATGGTTGACAGAGTAG...CTGGGGAAGCCCACAGTCCTCTAGCAGACCTAGGAGCCTCCGTCCAGCAAAGCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000058370.14 |
||
| 3UTR TCA 72 bp | GACAGGCTCCAGCTTACCTGCCAATATTTAGTGTTCTaGGGGTCAGGACTCCAAGATGGCAGCAGAGACCAG | + |
|
Preference number: 3 (lower is better) Translates to: DRLQLTCQYLVF*GSGLQDGSRDQ Trigger: CTGGTCTCTGCTGCCATCTTGGAGTCCTGACCCTCAGAACACTAAATATTGGCAGGTAAGCTGGAGCCTGTC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000058370.14 |
||
| 3UTR CCA 72 bp | ACTGAAACCCCCTCTCTATCCAAACCAAGAGTGGGCTaGGAGTTCTGGTCATTTGTACAGAACCCTGCAGGC | + |
|
Preference number: 3 (lower is better) Translates to: TETPSLSKPRVG*EFWSFVQNPAG Trigger: GCCTGCAGGGTTCTGTACAAATGACCAGAACTCCCAGCCCACTCTTGGTTTGGATAGAGAGGGGGTTTCAGT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000058370.14 |
||
| 3UTR CCA 72 bp | AAGAGCAGCCACATCTTCCATACCAGAAGTGAGGAATaGGGAAGCCAGACAGGTGGCTCCACACATCGTTCT | + |
|
Preference number: 3 (lower is better) Translates to: KSSHIFHTRSEE*GSQTGGSTHRS Trigger: AGAACGATGTGTGGAGCCACCTGTCTGGCTTCCCCATTCCTCACTTCTGGTATGGAAGATGTGGCTGCTCTT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000058370.14 |
||
| 3UTR CCA 72 bp | CCAATATTTAGTGTTCTGAGGGTCAGGACTCCAAGATaGCAGCAGAGACCAGACCTGACCTTGGAGTGGGCA | + |
|
Preference number: 3 (lower is better) Translates to: PIFSVLRVRTPR*QQRPDLTLEWA Trigger: TGCCCACTCCAAGGTCAGGTCTGGTCTCTGCTGCCATCTTGGAGTCCTGACCCTCAGAACACTAAATATTGG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000058370.14 |
||
| 3UTR-3UTR CAA 90 bp | CATACCAGAAGTGAGGAATGGGGAAGCCAGACAGGTGGCTCCACACATCGTTCTCTGGAAAATGCACATTaGGAGCACTCCACTAGGCTC | + |
|
Preference number: 3 (lower is better) Translates to: HTRSEEWGSQTGGSTHRSLENAH*EHSTRL Trigger: GAGCCTAGTGGAGTGCTCCAAATGTGCATTTTCCAG...AGAACGATGTGTGGAGCCACCTGTCTGGCTTCCCCATTCCTCACTTCTGGTATG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000058370.14 |
||
| 3UTR TCA 72 bp | CTGCACACTCACTCATCTTGTCACATTGACACGCATTaGCTAGGGCCGTGGATAAGCATGTTGGAGAGCAAC | + |
|
Preference number: 3 (lower is better) Translates to: LHTHSSCHIDTH*LGPWISMLESN Trigger: GTTGCTCTCCAACATGCTTATCCACGGCCCTAGTCAATGCGTGTCAATGTGACAAGATGAGTGAGTGTGCAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000058370.14 |
||
| 3UTR-3UTR CAA 90 bp | CACCAATTATTCAGTAATGATATAATGGTGGACAGGCTCCAGCTTACCTGCCAAAGACCAGACCTGACCTaGGAGTGGGCAGGGAACAAG | + |
|
Preference number: 3 (lower is better) Translates to: HQLFSNDIMVDRLQLTCQRPDLT*EWAGNK Trigger: CTTGTTCCCTGCCCACTCCAAGGTCAGGTCTGGTCT...TTGGCAGGTAAGCTGGAGCCTGTCCACCATTATATCATTACTGAATAATTGGTG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000058370.14 |
||
| 3UTR TCA 72 bp | AGGTGGCTCCACACATCGTTCTGGCCAAGGTCAATCTaGGATGGCTTAAGCACAGCAGGAAAACATCCATTT | + |
|
Preference number: 3 (lower is better) Translates to: RWLHTSFWPRSI*DGLSTAGKHPF Trigger: AAATGGATGTTTTCCTGCTGTGCTTAAGCCATCTCAGATTGACCTTGGCCAGAACGATGTGTGGAGCCACCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000058370.14 |
||
| 3UTR GCA 72 bp | CTCTATTCTGGCCCTTGCTACTGTTGGGTGTGTGTCTaGACACTCACTCATCTTGTCACATTGACACGCATT | + |
|
Preference number: 3 (lower is better) Translates to: LYSGPCYCWVCV*TLTHLVTLTRI Trigger: AATGCGTGTCAATGTGACAAGATGAGTGAGTGTGCAGACACACACCCAACAGTAGCAAGGGCCAGAATAGAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000058370.14 |
||
| 3UTR TCA 72 bp | TTTTCATGTGTATACCTCAAGGCACTCAGTCAGTACTaGAACCCCCTCTCTATCCAAACCAAGAGTGGGCTG | + |
|
Preference number: 3 (lower is better) Translates to: FSCVYLKALSQY*NPLSIQTKSGL Trigger: CAGCCCACTCTTGGTTTGGATAGAGAGGGGGTTTCAGTACTGACTGAGTGCCTTGAGGTATACACATGAAAA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000058370.14 |
||
| 3UTR GCA 72 bp | GAGACTCTCTCAACCTGTTCAGGCAGGCCATACATTTaGTTCAAGTCAAGACTGGCTTTGAACACCCAATTC | + |
|
Preference number: 3 (lower is better) Translates to: ETLSTCSGRPYI*FKSRLALNTQF Trigger: GAATTGGGTGTTCAAAGCCAGTCTTGACTTGAAGCAAATGTATGGCCTGCCTGAACAGGTTGAGAGAGTCTC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000058370.14 |
||
| 3UTR CCA 72 bp | ATTTCTCATGTACAGGGGTATATGAGGTCCCACAAGTaGACAAGAGAAGGCACACAGGAGGTGGTAACATTC | + |
|
Preference number: 3 (lower is better) Translates to: ISHVQGYMRSHK*TREGTQEVVTF Trigger: GAATGTTACCACCTCCTGTGTGCCTTCTCTTGTCCACTTGTGGGACCTCATATACCCCTGTACATGAGAAAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000058370.14 |
||
| 3UTR-3UTR CAA 90 bp | CATCAGCATGATAATCTTCTAGGCTCATCTGCTGAGGAAAAACCTGCAGCAGAGTGTCTCAGCCGAGACTaGTTTCAGAATGAACTTAGG | + |
|
Preference number: 3 (lower is better) Translates to: HQHDNLLGSSAEEKPAAECLSRD*FQNELR Trigger: CCTAAGTTCATTCTGAAACAAGTCTCGGCTGAGACA...CTCTGCTGCAGGTTTTTCCTCAGCAGATGAGCCTAGAAGATTATCATGCTGATG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000058370.14 |
||
| 3UTR-3UTR CAA 90 bp | AACTTTTATTTCTCATGTACAGGGGTATATGAGGTCCCACAAGTGGACAAGAGATACAGTGGTCCTGGCTaGTCTCAGCCGAGACTTGTT | + |
|
Preference number: 3 (lower is better) Translates to: NFYFSCTGVYEVPQVDKRYSGPG*SQPRLV Trigger: AACAAGTCTCGGCTGAGACAAGCCAGGACCACTGTA...TCTCTTGTCCACTTGTGGGACCTCATATACCCCTGTACATGAGAAATAAAAGTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000058370.14 |
||
| 3UTR CCA 72 bp | GCAGCACTCAGAAAACAATCCCTGAATGCATGGGTGTaGGCATCTTTAATAAACATTACAGAAAGTGGGAGG | + |
|
Preference number: 3 (lower is better) Translates to: AALRKQSLNAWV*ASLINITESGR Trigger: CCTCCCACTTTCTGTAATGTTTATTAAAGATGCCCACACCCATGCATTCAGGGATTGTTTTCTGAGTGCTGC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000058370.14 |
||
| 3UTR-3UTR CAA 90 bp | CACCAATTATTCAGTAATGATATAATGGTGGACAGGCTCCAGCTTACCTGCCAAGGATGTGTGGCCACATaGCTTCTAAAGAACTCAGAA | + |
|
Preference number: 3 (lower is better) Translates to: HQLFSNDIMVDRLQLTCQGCVAT*LLKNSE Trigger: TTCTGAGTTCTTTAGAAGCAATGTGGCCACACATCC...TTGGCAGGTAAGCTGGAGCCTGTCCACCATTATATCATTACTGAATAATTGGTG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000058370.14 |
||
| 3UTR CCA 72 bp | TGGTATAAATACTCTACTCTGTCAACCATTGAAACCTaGTTTTCATGTGTATACCTCAAGGCACTCAGTCAG | + |
|
Preference number: 3 (lower is better) Translates to: WYKYSTLSTIET*FSCVYLKALSQ Trigger: CTGACTGAGTGCCTTGAGGTATACACATGAAAACCAGGTTTCAATGGTTGACAGAGTAGAGTATTTATACCA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000058370.14 |
||
| CDS-3UTR TCA 90 bp | TTTAGTGTTCTGAGGGTCAGGACTCCAAGATGGCAGCAGAGACCAGACCTGACCCCGCTGGCGGGCCAGTaGGGTGGCTGGAGCCGGGGA | + |
|
Preference number: 4 (lower is better) Translates to: FSVLRVRTPRWQQRPDLTPLAGQ*GGWSRG Trigger: TCCCCGGCTCCAGCCACCTCACTGGCCCGCCAGCGG...GGTCAGGTCTGGTCTCTGCTGCCATCTTGGAGTCCTGACCCTCAGAACACTAAA 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000058370.14 |
||
| CDS-3UTR GCA 90 bp | AGCTTTGCTGGACGGAGGCTCCTAGGTCTGCTAGAGGACTGTGGGCTTCCCCAGCCGCGCAGTAACCAGTaGTATGTTCCCAGGCCTCGC | + |
|
Preference number: 4 (lower is better) Translates to: SFAGRRLLGLLEDCGLPQPRSNQ*YVPRPR Trigger: GCGAGGCCTGGGAACATAGCACTGGTTACTGCGCGG...CTGGGGAAGCCCACAGTCCTCTAGCAGACCTAGGAGCCTCCGTCCAGCAAAGCT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000058370.14 |
||
| CDS-3UTR GCA 90 bp | AGCTTTGCTGGACGGAGGCTCCTAGGTCTGCTAGAGGACTGTGGGCTTCCCCAGTGCCAGGAGCATCTCTaGTTGTGCTCCTCCTGGGCT | + |
|
Preference number: 4 (lower is better) Translates to: SFAGRRLLGLLEDCGLPQCQEHL*LCSSWA Trigger: AGCCCAGGAGGAGCACAAGCAGAGATGCTCCTGGCA...CTGGGGAAGCCCACAGTCCTCTAGCAGACCTAGGAGCCTCCGTCCAGCAAAGCT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000058370.14 |
||
| CDS-3UTR GCA 90 bp | AGCTTTGCTGGACGGAGGCTCCTAGGTCTGCTAGAGGACTGTGGGCTTCCCCAGTCTTCTTTTCTTTGCTaGGCTGTCCGGGCAGTGAGG | + |
|
Preference number: 4 (lower is better) Translates to: SFAGRRLLGLLEDCGLPQSSFLC*AVRAVR Trigger: CCTCACTGCCCGGACAGCGCAGCAAAGAAAAGAAGA...CTGGGGAAGCCCACAGTCCTCTAGCAGACCTAGGAGCCTCCGTCCAGCAAAGCT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000058370.14 |
||
| CDS-3UTR CCA 90 bp | AGCTTTGCTGGACGGAGGCTCCTAGGTCTGCTAGAGGACTGTGGGCTTCCCCAGCTGAACTGTCAGCTCTaGGGGCTGCAACACAACTTC | + |
|
Preference number: 4 (lower is better) Translates to: SFAGRRLLGLLEDCGLPQLNCQL*GLQHNF Trigger: GAAGTTGTGTTGCAGCCCCCAGAGCTGACAGTTCAG...CTGGGGAAGCCCACAGTCCTCTAGCAGACCTAGGAGCCTCCGTCCAGCAAAGCT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000058370.14 |
||
| CDS-3UTR CCA 90 bp | AGCTTTGCTGGACGGAGGCTCCTAGGTCTGCTAGAGGACTGTGGGCTTCCCCAGGAAAGAGCTGCCTGGTaGCTGTGCAGGTGTCATTTC | + |
|
Preference number: 4 (lower is better) Translates to: SFAGRRLLGLLEDCGLPQERAAW*LCRCHF Trigger: GAAATGACACCTGCACAGCCACCAGGCAGCTCTTTC...CTGGGGAAGCCCACAGTCCTCTAGCAGACCTAGGAGCCTCCGTCCAGCAAAGCT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000058370.14 |
||
| CDS-3UTR TCA 90 bp | TGGATTAAGGGATTGAGTCCATTCTACAGTGGTCCTGGCTTGTCTCAGCCGAGAGTGCTCCTCCTGGGCTaGACTGTCAGCTCTGGGGGC | + |
|
Preference number: 4 (lower is better) Translates to: WIKGLSPFYSGPGLSQPRVLLLG*TVSSGG Trigger: GCCCCCAGAGCTGACAGTTCAGCCCAGGAGGAGCAC...TCTCGGCTGAGACAAGCCAGGACCACTGTAGAATGGACTCAATCCCTTAATCCA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000058370.14 |
||
| CDS-3UTR GCA 90 bp | TTTAGTGTTCTGAGGGTCAGGACTCCAAGATGGCAGCAGAGACCAGACCTGACCGCCTCTGGAAAGAGCTaGCTGGTGGCTGTGCAGGTG | + |
|
Preference number: 4 (lower is better) Translates to: FSVLRVRTPRWQQRPDLTASGKS*LVAVQV Trigger: CACCTGCACAGCCACCAGGCAGCTCTTTCCAGAGGC...GGTCAGGTCTGGTCTCTGCTGCCATCTTGGAGTCCTGACCCTCAGAACACTAAA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000058370.14 |
||
| CDS-3UTR TCA 90 bp | GCCATACATTTGCTTCAAGTCAAGACTGGCTTTGAACACCCAATTCTTTCGCCTGAGCGCTGCTGTCCTTaGGCCTGCTGCTGCCGCCGC | + |
|
Preference number: 4 (lower is better) Translates to: AIHLLQVKTGFEHPILSPERCCP*ACCCRR Trigger: GCGGCGGCAGCAGCAGGCTCAAGGACAGCAGCGCTC...AGGCGAAAGAATTGGGTGTTCAAAGCCAGTCTTGACTTGAAGCAAATGTATGGC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000058370.14 |
||
| CDS-3UTR GCA 90 bp | GCTCAAGGAAAATACCAGCCCTTCCAGCTGTGTCTCAGGCAAGTGCTGGGATGCCTAAGAAACAGCACGTaGTGGGCCTCCTGCTCCATG | + |
|
Preference number: 4 (lower is better) Translates to: AQGKYQPFQLCLRQVLGCLRNST*WASCSM Trigger: CATGGAGCAGGAGGCCCAGCACGTGCTGTTTCTTAG...GCATCCCAGCACTTGCCTGAGACACAGCTGGAAGGGCTGGTATTTTCCTTGAGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000058370.14 |
||
| CDS-3UTR CCA 90 bp | GCAGGGAACAAGAGCAGCCACATCTTCCATACCAGAAGTGAGGAATGGGGAAGCGGCTGCCGAGGGGCCTaGTTCTTGCTAAGAAACAGC | + |
|
Preference number: 4 (lower is better) Translates to: AGNKSSHIFHTRSEEWGSGCRGA*FLLRNS Trigger: GCTGTTTCTTAGCAAGAACCAGGCCCCTCGGCAGCC...GCTTCCCCATTCCTCACTTCTGGTATGGAAGATGTGGCTGCTCTTGTTCCCTGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000058370.14 |
||
| CDS-3UTR CCA 90 bp | GCTCAAGGAAAATACCAGCCCTTCCAGCTGTGTCTCAGGCAAGTGCTGGGATGCCTGGAAAGAGCTGCCTaGTGGCTGTGCAGGTGTCAT | + |
|
Preference number: 4 (lower is better) Translates to: AQGKYQPFQLCLRQVLGCLERAA*WLCRCH Trigger: ATGACACCTGCACAGCCACCAGGCAGCTCTTTCCAG...GCATCCCAGCACTTGCCTGAGACACAGCTGGAAGGGCTGGTATTTTCCTTGAGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000058370.14 |
||
| CDS-3UTR CCA 90 bp | CTGACCTTGGAGTGGGCAGGGAACAAGAGCAGCCACATCTTCCATACCAGAAGTGCTTCCCTTTTCCTCTaGGCCTTTTCCAGTCGTCGC | + |
|
Preference number: 4 (lower is better) Translates to: LTLEWAGNKSSHIFHTRSASLFL*AFSSRR Trigger: GCGACGACTGGAAAAGGCCCAGAGGAAAAGGGAAGC...ACTTCTGGTATGGAAGATGTGGCTGCTCTTGTTCCCTGCCCACTCCAAGGTCAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000058370.14 |
||
| CDS-3UTR CCA 90 bp | ATGTCTCCTGCCCCTTACACCATGAAGACCTTTACACACATGAAGACATATATGAGCTGCCTGCACCTCTaGCTGCCGAGGGGCCTGGTT | + |
|
Preference number: 4 (lower is better) Translates to: MSPAPYTMKTFTHMKTYMSCLHL*LPRGLV Trigger: AACCAGGCCCCTCGGCAGCCAGAGGTGCAGGCAGCT...CATATATGTCTTCATGTGTGTAAAGGTCTTCATGGTGTAAGGGGCAGGAGACAT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000058370.14 |
||
| CDS-3UTR CCA 90 bp | TGGATTAAGGGATTGAGTCCATTCTACAGTGGTCCTGGCTTGTCTCAGCCGAGATGCTTGTGCTCCTCCTaGGCTGAACTGTCAGCTCTG | + |
|
Preference number: 4 (lower is better) Translates to: WIKGLSPFYSGPGLSQPRCLCSS*AELSAL Trigger: CAGAGCTGACAGTTCAGCCCAGGAGGAGCACAAGCA...TCTCGGCTGAGACAAGCCAGGACCACTGTAGAATGGACTCAATCCCTTAATCCA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000058370.14 |
||
| CDS-3UTR CCA 90 bp | TGGCTTGTCTCAGCCGAGACTTGTTTCAGAATGAACTTAGGCTCAAGGAAAATAGCGTGGCCCTGCCTCTaGAAAGAGCTGCCTGGTGGC | + |
|
Preference number: 4 (lower is better) Translates to: WLVSAETCFRMNLGSRKIAWPCL*KELPGG Trigger: GCCACCAGGCAGCTCTTTCCAGAGGCAGGGCCACGC...TATTTTCCTTGAGCCTAAGTTCATTCTGAAACAAGTCTCGGCTGAGACAAGCCA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000058370.14 |
||
| CDS-3UTR TCA 90 bp | TGGATTAAGGGATTGAGTCCATTCTACAGTGGTCCTGGCTTGTCTCAGCCGAGATTTCCAACGTCTTCTTaGAAGCCACCTGGGCCTCCT | + |
|
Preference number: 4 (lower is better) Translates to: WIKGLSPFYSGPGLSQPRFPTSS*KPPGPP Trigger: AGGAGGCCCAGGTGGCTTTCAAGAAGACGTTGGAAA...TCTCGGCTGAGACAAGCCAGGACCACTGTAGAATGGACTCAATCCCTTAATCCA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000058370.14 |
||
| CDS-3UTR GCA 90 bp | TTTAGTGTTCTGAGGGTCAGGACTCCAAGATGGCAGCAGAGACCAGACCTGACCTCTGGAACGCTTTCTTaGGCTCAGACTTCTCCTTCT | + |
|
Preference number: 4 (lower is better) Translates to: FSVLRVRTPRWQQRPDLTSGTLS*AQTSPS Trigger: AGAAGGAGAAGTCTGAGCGCAAGAAAGCGTTCCAGA...GGTCAGGTCTGGTCTCTGCTGCCATCTTGGAGTCCTGACCCTCAGAACACTAAA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000058370.14 |
||
| CDS-3UTR GCA 90 bp | TGGATTAAGGGATTGAGTCCATTCTACAGTGGTCCTGGCTTGTCTCAGCCGAGAGTCAGCTCTGGGGGCTaGAACACAACTTCTCCAAAC | + |
|
Preference number: 4 (lower is better) Translates to: WIKGLSPFYSGPGLSQPRVSSGG*NTTSPN Trigger: GTTTGGAGAAGTTGTGTTGCAGCCCCCAGAGCTGAC...TCTCGGCTGAGACAAGCCAGGACCACTGTAGAATGGACTCAATCCCTTAATCCA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000058370.14 |
||
| CDS-3UTR GCA 90 bp | AGAAGTGAGGAATGGGGAAGCCAGACAGGTGGCTCCACACATCGTTCTGGCCAAGCATTAGTGATTTCTTaGCAGGAGCATCTCTGCTTG | + |
|
Preference number: 4 (lower is better) Translates to: RSEEWGSQTGGSTHRSGQALVIS*QEHLCL Trigger: CAAGCAGAGATGCTCCTGGCAAGAAATCACTAATGC...TTGGCCAGAACGATGTGTGGAGCCACCTGTCTGGCTTCCCCATTCCTCACTTCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000058370.14 |
||
| CDS-3UTR GCA 90 bp | TTTAGTGTTCTGAGGGTCAGGACTCCAAGATGGCAGCAGAGACCAGACCTGACCGTCATTTCCTGTCTATaGAGCTTCTTCAGGGCTCTG | + |
|
Preference number: 4 (lower is better) Translates to: FSVLRVRTPRWQQRPDLTVISCL*SFFRAL Trigger: CAGAGCCCTGAAGAAGCTGCATAGACAGGAAATGAC...GGTCAGGTCTGGTCTCTGCTGCCATCTTGGAGTCCTGACCCTCAGAACACTAAA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000058370.14 |
||
| CDS-3UTR CCA 90 bp | AACAAGAGCAGCCACATCTTCCATACCAGAAGTGAGGAATGGGGAAGCCAGACATCCAGTCGTCGCTTCTaGAACGCTTTCTTGCGCTCA | + |
|
Preference number: 4 (lower is better) Translates to: NKSSHIFHTRSEEWGSQTSSRRF*NAFLRS Trigger: TGAGCGCAAGAAAGCGTTCCAGAAGCGACGACTGGA...TGTCTGGCTTCCCCATTCCTCACTTCTGGTATGGAAGATGTGGCTGCTCTTGTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000058370.14 |
||
| CDS-3UTR GCA 90 bp | GAGATGGGATACCATGGTGGTCACTCTTATAAGGACAACCTTCAGAGGAAGGAAGAGCATCTCTGCTTGTaGTCCTCCTGGGCTGAACTG | + |
|
Preference number: 4 (lower is better) Translates to: EMGYHGGHSYKDNLQRKEEHLCL*SSWAEL Trigger: CAGTTCAGCCCAGGAGGAGCACAAGCAGAGATGCTC...TTCCTTCCTCTGAAGGTTGTCCTTATAAGAGTGACCACCATGGTATCCCATCTC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000058370.14 |
||
| 3UTR CAA 72 bp | ACACCAGCAGCTTCAGTAATTGGCTGGATTAAGGGATaGAGTCCATTCTACAGTGGTCCTGGCTTGTCTCAG | + |
|
Preference number: 4 (lower is better) Translates to: TPAASVIGWIKG*SPFYSGPGLSQ Trigger: CTGAGACAAGCCAGGACCACTGTAGAATGGACTCAATCCCTTAATCCAGCCAATTACTGAAGCTGCTGGTGT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000058370.14 |
||
| CDS-3UTR TCA 90 bp | TCAACCATTGAAACCTGGTTTTCATGTGTATACCTCAAGGCACTCAGTCAGTACCCCCCTTCCTTTGCTTaGACTTGGGGACAGCGATGT | + |
|
Preference number: 4 (lower is better) Translates to: STIETWFSCVYLKALSQYPPSFA*TWGQRC Trigger: ACATCGCTGTCCCCAAGTTCAAGCAAAGGAAGGGGG...GTACTGACTGAGTGCCTTGAGGTATACACATGAAAACCAGGTTTCAATGGTTGA 48% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000058370.14 |
||
| CDS-3UTR GCA 90 bp | ACTCAGAAAACAATCCCTGAATGCATGGGTGTGGGCATCTTTAATAAACATTACAGACAAGCGTGGCCCTaGCTCTGGAAAGAGCTGCCT | + |
|
Preference number: 4 (lower is better) Translates to: TQKTIPECMGVGIFNKHYRQAWP*LWKELP Trigger: AGGCAGCTCTTTCCAGAGGCAGGGCCACGCTTGTCT...GTAATGTTTATTAAAGATGCCCACACCCATGCATTCAGGGATTGTTTTCTGAGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000058370.14 |
||
| CDS TCA 90 bp | CACAGCCCGTTCCCGCTCTTCCCCCAGGATCCGCTGGCGGGCCAGTaGGGTGGCTGGAGCCGGGGACCCGCCACCAGGACCCAACAGCAT | + |
|
Preference number: 5 (lower is better) Translates to: HSPFPLFPQDPLAGQ*GGWSRGPATRTQQH Trigger: ATGCTGTTGGGTCCTGGTGGCGGGTCCCCGGCTCCAGCCACCTCACTGGCCCGCCAGCGGATCCTGGGGGAAGAGCGGGAACGGGCTGTG 71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000058370.14 ENSMUST00000176120.2 |
||
| CDS-3UTR CAA 90 bp | AACAAGAGCAGCCACATCTTCCATACCAGAAGTGAGGAATGGGGAAGCCAGACACGAGCGCTGCTGTCCTaGAGCCTGCTGCTGCCGCCG | + |
|
Preference number: 5 (lower is better) Translates to: NKSSHIFHTRSEEWGSQTRALLS*SLLLPP Trigger: CGGCGGCAGCAGCAGGCTCAAGGACAGCAGCGCTCG...TGTCTGGCTTCCCCATTCCTCACTTCTGGTATGGAAGATGTGGCTGCTCTTGTT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000058370.14 |
||
| CDS-3UTR CAA 90 bp | GCTCAAGGAAAATACCAGCCCTTCCAGCTGTGTCTCAGGCAAGTGCTGGGATGCCAGGAGCATCTCTGCTaGTGCTCCTCCTGGGCTGAA | + |
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Preference number: 5 (lower is better) Translates to: AQGKYQPFQLCLRQVLGCQEHLC*CSSWAE Trigger: TTCAGCCCAGGAGGAGCACAAGCAGAGATGCTCCTG...GCATCCCAGCACTTGCCTGAGACACAGCTGGAAGGGCTGGTATTTTCCTTGAGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000058370.14 |
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| CDS-3UTR CAA 90 bp | AACAAGAGCAGCCACATCTTCCATACCAGAAGTGAGGAATGGGGAAGCCAGACACGAGGGGCCTGGTTCTaGCTAAGAAACAGCACGTGC | + |
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Preference number: 5 (lower is better) Translates to: NKSSHIFHTRSEEWGSQTRGAWF*LRNSTC Trigger: GCACGTGCTGTTTCTTAGCAAGAACCAGGCCCCTCG...TGTCTGGCTTCCCCATTCCTCACTTCTGGTATGGAAGATGTGGCTGCTCTTGTT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000058370.14 |
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| CDS GCA 90 bp | TCTTCTTCAGCATTAGTGATTTCTTGCCAGGAGCATCTCTGCTTGTaGTCCTCCTGGGCTGAACTGTCAGCTCTGGGGGCTGCAACACAA | + |
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Preference number: 5 (lower is better) Translates to: SSSALVISCQEHLCL*SSWAELSALGAATQ Trigger: TTGTGTTGCAGCCCCCAGAGCTGACAGTTCAGCCCAGGAGGAGCACAAGCAGAGATGCTCCTGGCAAGAAATCACTAATGCTGAAGAAGA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000058370.14 |
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| CDS-3UTR CAA 90 bp | CATACCAGAAGTGAGGAATGGGGAAGCCAGACAGGTGGCTCCACACATCGTTCTACTTTCTTCTTTTCTTaGCTGCGCTGTCCGGGCAGT | + |
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Preference number: 5 (lower is better) Translates to: HTRSEEWGSQTGGSTHRSTFFFS*LRCPGS Trigger: ACTGCCCGGACAGCGCAGCAAAGAAAAGAAGAAAGT...AGAACGATGTGTGGAGCCACCTGTCTGGCTTCCCCATTCCTCACTTCTGGTATG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000058370.14 |
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| CDS GCA 90 bp | TCTTCTTCAGCATTAGTGATTTCTTGCCAGGCTTTCAGTAGCTCCTaGTCCAATCTGTCCACGGCTCTTGCTTCCCTTTTCCTCTGGGCC | + |
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Preference number: 5 (lower is better) Translates to: SSSALVISCQAFSSS*SNLSTALASLFLWA Trigger: GGCCCAGAGGAAAAGGGAAGCAAGAGCCGTGGACAGATTGGAGCAGGAGCTACTGAAAGCCTGGCAAGAAATCACTAATGCTGAAGAAGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000176120.2 |
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| CDS GCA 90 bp | TGCAACACAACTTCTCCAAACTTCACAGTATCTTTCAGTAGCTCCTaGTCCAATCTGTCCACGGCTCTTGCTTCCCTTTTCCTCTGGGCC | + |
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Preference number: 5 (lower is better) Translates to: CNTTSPNFTVSFSSS*SNLSTALASLFLWA Trigger: GGCCCAGAGGAAAAGGGAAGCAAGAGCCGTGGACAGATTGGAGCAGGAGCTACTGAAAGATACTGTGAAGTTTGGAGAAGTTGTGTTGCA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000058370.14 |
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| CDS CCA 72 bp | TGCACAGCCCGTTCCCGCTCTTCCCCCAGGATCCGCTaGCGGGCCAGTGAGGTGGCTGGAGCCGGGGACCCG | + |
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Preference number: 6 (lower is better) Translates to: CTARSRSSPRIR*RASEVAGAGDP Trigger: CGGGTCCCCGGCTCCAGCCACCTCACTGGCCCGCCAGCGGATCCTGGGGGAAGAGCGGGAACGGGCTGTGCA 74% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000058370.14 ENSMUST00000176120.2 |
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| CDS TCA 72 bp | CACTTTCTTCTTTTCTTTGCTGCGCTGTCCGGGCAGTaGGGCCGAGCGCTGCTGTCCTTGAGCCTGCTGCTG | + |
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Preference number: 6 (lower is better) Translates to: HFLLFFAALSGQ*GRALLSLSLLL Trigger: CAGCAGCAGGCTCAAGGACAGCAGCGCTCGGCCTCACTGCCCGGACAGCGCAGCAAAGAAAAGAAGAAAGTG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000058370.14 ENSMUST00000175970.8 ENSMUST00000176120.2 |
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| CDS CCA 72 bp | CAGACAAGCGTGGCCCTGCCTCTGGAAAGAGCTGCCTaGTGGCTGTGCAGGTGTCATTTCCTGTCTATGCAG | + |
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Preference number: 6 (lower is better) Translates to: QTSVALPLERAA*WLCRCHFLSMQ Trigger: CTGCATAGACAGGAAATGACACCTGCACAGCCACCAGGCAGCTCTTTCCAGAGGCAGGGCCACGCTTGTCTG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000058370.14 |
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| CDS CAA 90 bp | CTTGCCAGGCTTTCAGTAGCTCCTGCTCCAATCTGTCCACGGCTCTaGCTTCCCTTTTCCTCTGGGCCTTTTCCAGTCGTCGCTTCTGGA | + |
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Preference number: 6 (lower is better) Translates to: LARLSVAPAPICPRL*LPFSSGPFPVVASG Trigger: TCCAGAAGCGACGACTGGAAAAGGCCCAGAGGAAAAGGGAAGCAAGAGCCGTGGACAGATTGGAGCAGGAGCTACTGAAAGCCTGGCAAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000176120.2 |
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| CDS GCA 72 bp | GCATTAGTGATTTCTTGCCAGGAGCATCTCTGCTTGTaGTCCTCCTGGGCTGAACTGTCAGCTCTGGGGGCT | + |
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Preference number: 6 (lower is better) Translates to: ALVISCQEHLCL*SSWAELSALGA Trigger: AGCCCCCAGAGCTGACAGTTCAGCCCAGGAGGAGCACAAGCAGAGATGCTCCTGGCAAGAAATCACTAATGC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000058370.14 |
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| CDS CCA 72 bp | TCCCTTTTCCTCTGGGCCTTTTCCAGTCGTCGCTTCTaGAACGCTTTCTTGCGCTCAGACTTCTCCTTCTTG | + |
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Preference number: 6 (lower is better) Translates to: SLFLWAFSSRRF*NAFLRSDFSFL Trigger: CAAGAAGGAGAAGTCTGAGCGCAAGAAAGCGTTCCAGAAGCGACGACTGGAAAAGGCCCAGAGGAAAAGGGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000058370.14 ENSMUST00000176120.2 |
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| CDS CAA 90 bp | TCACAGTATCTTTCAGTAGCTCCTGCTCCAATCTGTCCACGGCTCTaGCTTCCCTTTTCCTCTGGGCCTTTTCCAGTCGTCGCTTCTGGA | + |
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Preference number: 6 (lower is better) Translates to: SQYLSVAPAPICPRL*LPFSSGPFPVVASG Trigger: TCCAGAAGCGACGACTGGAAAAGGCCCAGAGGAAAAGGGAAGCAAGAGCCGTGGACAGATTGGAGCAGGAGCTACTGAAAGATACTGTGA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000058370.14 |
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| CDS GCA 72 bp | GCATTAGTGATTTCTTGCCAGGCTTTCAGTAGCTCCTaGTCCAATCTGTCCACGGCTCTTGCTTCCCTTTTC | + |
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Preference number: 6 (lower is better) Translates to: ALVISCQAFSSS*SNLSTALASLF Trigger: GAAAAGGGAAGCAAGAGCCGTGGACAGATTGGAGCAGGAGCTACTGAAAGCCTGGCAAGAAATCACTAATGC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000176120.2 |
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| CDS GCA 72 bp | GACCCAACAGCATCTTCTTCAGCATTAGTGATTTCTTaGCAGGCTTTCAGTAGCTCCTGCTCCAATCTGTCC | + |
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Preference number: 6 (lower is better) Translates to: DPTASSSALVIS*QAFSSSCSNLS Trigger: GGACAGATTGGAGCAGGAGCTACTGAAAGCCTGGCAAGAAATCACTAATGCTGAAGAAGATGCTGTTGGGTC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000176120.2 |
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