Pregenerated sensors for CCDC134 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000068114Ensembl transcript IDs: ENSMUST00000089174.6, ENSMUST00000229384.2, ENSMUST00000229411.2, ENSMUST00000229597.2
Found 180 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | CTGGTTCTGTTGCTTCCTTATCAAGGGCGGCAGTGGCCTGCAGCCTaGCCTCACCAAGGGGATCCAGGCCAGAAGTTCCTTCAGCCAGCC | + |
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Preference number: 1 (lower is better) Translates to: LVLLLPYQGRQWPAA*PHQGDPGQKFLQPA Trigger: GGCTGGCTGAAGGAACTTCTGGCCTGGATCCCCTTGGTGAGGGCAGGCTGCAGGCCACTGCCGCCCTTGATAAGGAAGCAACAGAACCAG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000089174.6 ENSMUST00000229411.2 |
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| 3UTR GCA 90 bp | GGCAGAAACGTTCTCCAGGCTGGTCCTGACATCTGCAGCAGTTCCTaGTGCCCCTTACATTCTCCTCACCAGCCTGGGGGAGGCCAGTGG | + |
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Preference number: 1 (lower is better) Translates to: GRNVLQAGPDICSSS*CPLHSPHQPGGGQW Trigger: CCACTGGCCTCCCCCAGGCTGGTGAGGAGAATGTAAGGGGCAGCAGGAACTGCTGCAGATGTCAGGACCAGCCTGGAGAACGTTTCTGCC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000089174.6 ENSMUST00000229411.2 |
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| 3UTR GCA 90 bp | TCCTTCAGCCAGCCTCCTCCCGCAGCTTCCCTGCATGATCCTGTCTaGCGAGCAGTGTCCTTTCTGTGGTGTGCTGCAAGACCCTGGAAG | + |
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Preference number: 1 (lower is better) Translates to: SFSQPPPAASLHDPV*RAVSFLWCAARPWK Trigger: CTTCCAGGGTCTTGCAGCACACCACAGAAAGGACACTGCTCGGCAGACAGGATCATGCAGGGAAGCTGCGGGAGGAGGCTGGCTGAAGGA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000089174.6 ENSMUST00000229411.2 |
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| 3UTR GCA 90 bp | TCCAGGCCAGAAGTTCCTTCAGCCAGCCTCCTCCCGCAGCTTCCCTaGATGATCCTGTCTGCCGAGCAGTGTCCTTTCTGTGGTGTGCTG | + |
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Preference number: 1 (lower is better) Translates to: SRPEVPSASLLPQLP*MILSAEQCPFCGVL Trigger: CAGCACACCACAGAAAGGACACTGCTCGGCAGACAGGATCATGCAGGGAAGCTGCGGGAGGAGGCTGGCTGAAGGAACTTCTGGCCTGGA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000089174.6 ENSMUST00000229411.2 |
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| 3UTR GCA 90 bp | CCCTCTTTCCGAGGCAGAAACGTTCTCCAGGCTGGTCCTGACATCTaGAGCAGTTCCTGCTGCCCCTTACATTCTCCTCACCAGCCTGGG | + |
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Preference number: 1 (lower is better) Translates to: PSFRGRNVLQAGPDI*SSSCCPLHSPHQPG Trigger: CCCAGGCTGGTGAGGAGAATGTAAGGGGCAGCAGGAACTGCTGCAGATGTCAGGACCAGCCTGGAGAACGTTTCTGCCTCGGAAAGAGGG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000089174.6 ENSMUST00000229411.2 |
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| 3UTR CCA 90 bp | CAACCCTGGCTTCTGAGGGCGCAGCAAACAGTTCCCATCAGGAAGTaGCTGGTGCTCAGCAAGGTGCTTGCTGGGCCTATTCCACAGCCA | + |
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Preference number: 1 (lower is better) Translates to: QPWLLRAQQTVPIRK*LVLSKVLAGPIPQP Trigger: TGGCTGTGGAATAGGCCCAGCAAGCACCTTGCTGAGCACCAGCCACTTCCTGATGGGAACTGTTTGCTGCGCCCTCAGAAGCCAGGGTTG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000089174.6 ENSMUST00000229384.2 ENSMUST00000229411.2 |
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| 3UTR CCA 90 bp | GTAACTCAGAGCCTGGTTCTGTTGCTTCCTTATCAAGGGCGGCAGTaGCCTGCAGCCTGCCCTCACCAAGGGGATCCAGGCCAGAAGTTC | + |
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Preference number: 1 (lower is better) Translates to: VTQSLVLLLPYQGRQ*PAACPHQGDPGQKF Trigger: GAACTTCTGGCCTGGATCCCCTTGGTGAGGGCAGGCTGCAGGCCACTGCCGCCCTTGATAAGGAAGCAACAGAACCAGGCTCTGAGTTAC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000089174.6 ENSMUST00000229411.2 |
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| 3UTR TCA 90 bp | CTTAGGCCCCTAGCTGGTCCAGGGCTACAACTCAGACTGGGATCTTaGAATCCTCGGGCCTTTCCGGATCTCCTTCCGCCTCTCCTCCTT | + |
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Preference number: 1 (lower is better) Translates to: LRPLAGPGLQLRLGS*NPRAFPDLLPPLLL Trigger: AAGGAGGAGAGGCGGAAGGAGATCCGGAAAGGCCCGAGGATTTCAAGATCCCAGTCTGAGTTGTAGCCCTGGACCAGCTAGGGGCCTAAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000229384.2 ENSMUST00000229411.2 |
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| 3UTR TCA 90 bp | AGGGACTCCCTCTTTCCGAGGCAGAAACGTTCTCCAGGCTGGTCCTaGCATCTGCAGCAGTTCCTGCTGCCCCTTACATTCTCCTCACCA | + |
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Preference number: 1 (lower is better) Translates to: RDSLFPRQKRSPGWS*HLQQFLLPLTFSSP Trigger: TGGTGAGGAGAATGTAAGGGGCAGCAGGAACTGCTGCAGATGTCAGGACCAGCCTGGAGAACGTTTCTGCCTCGGAAAGAGGGAGTCCCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000089174.6 ENSMUST00000229411.2 |
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| 3UTR GCA 90 bp | CGCAGCAAACAGTTCCCATCAGGAAGTGGCTGGTGCTCAGCAAGGTaGTTGCTGGGCCTATTCCACAGCCACACAGTTGCTGCCTCTTCT | + |
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Preference number: 1 (lower is better) Translates to: RSKQFPSGSGWCSAR*LLGLFHSHTVAASS Trigger: AGAAGAGGCAGCAACTGTGTGGCTGTGGAATAGGCCCAGCAAGCACCTTGCTGAGCACCAGCCACTTCCTGATGGGAACTGTTTGCTGCG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000089174.6 ENSMUST00000229384.2 ENSMUST00000229411.2 |
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| 3UTR CCA 90 bp | CTGCAAGACCCTGGAAGCTCAGTCTTTTTGGCCAGAGCTCAACCCTaGCTTCTGAGGGCGCAGCAAACAGTTCCCATCAGGAAGTGGCTG | + |
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Preference number: 1 (lower is better) Translates to: LQDPGSSVFLARAQP*LLRAQQTVPIRKWL Trigger: CAGCCACTTCCTGATGGGAACTGTTTGCTGCGCCCTCAGAAGCCAGGGTTGAGCTCTGGCCAAAAAGACTGAGCTTCCAGGGTCTTGCAG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000089174.6 ENSMUST00000229384.2 ENSMUST00000229411.2 |
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| 3UTR CCA 90 bp | GCAGCTTCCCTGCATGATCCTGTCTGCCGAGCAGTGTCCTTTCTGTaGTGTGCTGCAAGACCCTGGAAGCTCAGTCTTTTTGGCCAGAGC | + |
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Preference number: 1 (lower is better) Translates to: AASLHDPVCRAVSFL*CAARPWKLSLFGQS Trigger: GCTCTGGCCAAAAAGACTGAGCTTCCAGGGTCTTGCAGCACACCACAGAAAGGACACTGCTCGGCAGACAGGATCATGCAGGGAAGCTGC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000089174.6 ENSMUST00000229411.2 |
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| 3UTR GCA 90 bp | GCAAACAGTTCCCATCAGGAAGTGGCTGGTGCTCAGCAAGGTGCTTaGTGGGCCTATTCCACAGCCACACAGTTGCTGCCTCTTCTGACT | + |
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Preference number: 1 (lower is better) Translates to: ANSSHQEVAGAQQGA*WAYSTATQLLPLLT Trigger: AGTCAGAAGAGGCAGCAACTGTGTGGCTGTGGAATAGGCCCAGCAAGCACCTTGCTGAGCACCAGCCACTTCCTGATGGGAACTGTTTGC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000089174.6 ENSMUST00000229384.2 ENSMUST00000229411.2 |
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| 3UTR TCA 90 bp | AAGGCAGCCACCTGCCTTGAGACTCATAGAAACCAGGCTGCCTTCTaGAGGCCTAACTCCTTGCATAGCTTCCTGCTCTGTAGCCTCCTG | + |
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Preference number: 1 (lower is better) Translates to: KAATCLETHRNQAAF*RPNSLHSFLLCSLL Trigger: CAGGAGGCTACAGAGCAGGAAGCTATGCAAGGAGTTAGGCCTTCAGAAGGCAGCCTGGTTTCTATGAGTCTCAAGGCAGGTGGCTGCCTT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000089174.6 ENSMUST00000229411.2 |
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| 3UTR GCA 90 bp | AGAGAGAGAGAGAGAGACCTAAGCCTAGCTCTTGCTTCTCTGCACTaGAGAGCCAGGGACTCCCTCTTTCCGAGGCAGAAACGTTCTCCA | + |
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Preference number: 1 (lower is better) Translates to: RERERDLSLALASLH*RARDSLFPRQKRSP Trigger: TGGAGAACGTTTCTGCCTCGGAAAGAGGGAGTCCCTGGCTCTGCAGTGCAGAGAAGCAAGAGCTAGGCTTAGGTCTCTCTCTCTCTCTCT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000089174.6 ENSMUST00000229411.2 |
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| 3UTR GCA 90 bp | TTGAGACTCATAGAAACCAGGCTGCCTTCTGAAGGCCTAACTCCTTaGATAGCTTCCTGCTCTGTAGCCTCCTGCTCTGTGGCCACGGGA | + |
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Preference number: 1 (lower is better) Translates to: LRLIETRLPSEGLTP*IASCSVASCSVATG Trigger: TCCCGTGGCCACAGAGCAGGAGGCTACAGAGCAGGAAGCTATGCAAGGAGTTAGGCCTTCAGAAGGCAGCCTGGTTTCTATGAGTCTCAA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000089174.6 ENSMUST00000229411.2 |
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| 3UTR CCA 90 bp | CTCAAAGCCTTCTGGAAAGGGTCGGTGCTAGGAATAAACTCTGTCTaGTCTGTTTTAAACGGGTTCCGGAAGTCAGAATCTTTCTCAGTG | + |
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Preference number: 1 (lower is better) Translates to: LKAFWKGSVLGINSV*SVLNGFRKSESFSV Trigger: CACTGAGAAAGATTCTGACTTCCGGAACCCGTTTAAAACAGACCAGACAGAGTTTATTCCTAGCACCGACCCTTTCCAGAAGGCTTTGAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000229384.2 ENSMUST00000229411.2 ENSMUST00000229597.2 |
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| 3UTR TCA 90 bp | AGAGCTTGTCAGAGGATTCAGACACCATCAAATTTATTTTACCAATaGAGGCACAGCACAGGGAAGAGAAAGAACAGGACAGGTCAGGCT | + |
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Preference number: 1 (lower is better) Translates to: RACQRIQTPSNLFYQ*RHSTGKRKNRTGQA Trigger: AGCCTGACCTGTCCTGTTCTTTCTCTTCCCTGTGCTGTGCCTTCATTGGTAAAATAAATTTGATGGTGTCTGAATCCTCTGACAAGCTCT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000089174.6 |
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| 3UTR-3UTR TCA 90 bp | TCCCATCAGGAAGTGGCTGGTGCTCAGCAAGGTGCTTGCTGGGCCTATTCCACACCTGGGCCATCAGGCTaGGGATGGGTGAGTGGGGCC | + |
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Preference number: 2 (lower is better) Translates to: SHQEVAGAQQGACWAYSTPGPSG*GWVSGA Trigger: GGCCCCACTCACCCATCCTCAGCCTGATGGCCCAGG...TGTGGAATAGGCCCAGCAAGCACCTTGCTGAGCACCAGCCACTTCCTGATGGGA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000229384.2 ENSMUST00000229411.2 |
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| 3UTR-3UTR TCA 90 bp | GCCTGGTTCTGTTGCTTCCTTATCAAGGGCGGCAGTGGCCTGCAGCCTGCCCTCCTCAACCCTGGCTTCTaGGGGCGCAGCAAACAGTTC | + |
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Preference number: 2 (lower is better) Translates to: AWFCCFLIKGGSGLQPALLNPGF*GRSKQF Trigger: GAACTGTTTGCTGCGCCCTCAGAAGCCAGGGTTGAG...GAGGGCAGGCTGCAGGCCACTGCCGCCCTTGATAAGGAAGCAACAGAACCAGGC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000089174.6 ENSMUST00000229411.2 |
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| 3UTR-3UTR TCA 90 bp | TCAGCAAGGTGCTTGCTGGGCCTATTCCACAGCCACACAGTTGCTGCCTCTTCTCCTGGGCCATCAGGCTaGGGATGGGTGAGTGGGGCC | + |
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Preference number: 2 (lower is better) Translates to: SARCLLGLFHSHTVAASSPGPSG*GWVSGA Trigger: GGCCCCACTCACCCATCCTCAGCCTGATGGCCCAGG...AGAAGAGGCAGCAACTGTGTGGCTGTGGAATAGGCCCAGCAAGCACCTTGCTGA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000229384.2 ENSMUST00000229411.2 |
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| 3UTR-3UTR GCA 90 bp | TGGCTGGTGCTCAGCAAGGTGCTTGCTGGGCCTATTCCACAGCCACACAGTTGCCAGTGGCCTGCAGCCTaGCCTCACCAAGGGGATCCA | + |
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Preference number: 2 (lower is better) Translates to: WLVLSKVLAGPIPQPHSCQWPAA*PHQGDP Trigger: TGGATCCCCTTGGTGAGGGCAGGCTGCAGGCCACTG...GCAACTGTGTGGCTGTGGAATAGGCCCAGCAAGCACCTTGCTGAGCACCAGCCA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000089174.6 ENSMUST00000229411.2 |
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| 3UTR-3UTR CCA 90 bp | AGCCAGGGACTCCCTCTTTCCGAGGCAGAAACGTTCTCCAGGCTGGTCCTGACATATCAAGGGCGGCAGTaGCCTGCAGCCTGCCCTCAC | + |
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Preference number: 2 (lower is better) Translates to: SQGLPLSEAETFSRLVLTYQGRQ*PAACPH Trigger: GTGAGGGCAGGCTGCAGGCCACTGCCGCCCTTGATA...TGTCAGGACCAGCCTGGAGAACGTTTCTGCCTCGGAAAGAGGGAGTCCCTGGCT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000089174.6 ENSMUST00000229411.2 |
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| 3UTR-3UTR TCA 90 bp | GTGGCTGGTGCTCAGCAAGGTGCTTGCTGGGCCTATTCCACAGCCACACAGTTGAGAGAGCTGGACCAGTaGCAGGCAGCCCAGGAACAC | + |
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Preference number: 2 (lower is better) Translates to: VAGAQQGACWAYSTATQLRELDQ*QAAQEH Trigger: GTGTTCCTGGGCTGCCTGTCACTGGTCCAGCTCTCT...CAACTGTGTGGCTGTGGAATAGGCCCAGCAAGCACCTTGCTGAGCACCAGCCAC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000089174.6 ENSMUST00000229411.2 |
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| 3UTR-3UTR GCA 90 bp | CCCTGGAAGCTCAGTCTTTTTGGCCAGAGCTCAACCCTGGCTTCTGAGGGCGCACTCCCGCAGCTTCCCTaGATGATCCTGTCTGCCGAG | + |
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Preference number: 2 (lower is better) Translates to: PWKLSLFGQSSTLASEGALPQLP*MILSAE Trigger: CTCGGCAGACAGGATCATGCAGGGAAGCTGCGGGAG...TGCGCCCTCAGAAGCCAGGGTTGAGCTCTGGCCAAAAAGACTGAGCTTCCAGGG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000089174.6 ENSMUST00000229411.2 |
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| 3UTR-3UTR CCA 90 bp | TCTGCACTGCAGAGCCAGGGACTCCCTCTTTCCGAGGCAGAAACGTTCTCCAGGGCCAGAGCTCAACCCTaGCTTCTGAGGGCGCAGCAA | + |
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Preference number: 2 (lower is better) Translates to: SALQSQGLPLSEAETFSRARAQP*LLRAQQ Trigger: TTGCTGCGCCCTCAGAAGCCAGGGTTGAGCTCTGGC...CCTGGAGAACGTTTCTGCCTCGGAAAGAGGGAGTCCCTGGCTCTGCAGTGCAGA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000089174.6 ENSMUST00000229411.2 |
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| 3UTR-3UTR CCA 90 bp | GTGGCTGGTGCTCAGCAAGGTGCTTGCTGGGCCTATTCCACAGCCACACAGTTGCTGAGGATGGGTGAGTaGGGCCCCTGGTCAAAGACG | + |
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Preference number: 2 (lower is better) Translates to: VAGAQQGACWAYSTATQLLRMGE*GPWSKT Trigger: CGTCTTTGACCAGGGGCCCCACTCACCCATCCTCAG...CAACTGTGTGGCTGTGGAATAGGCCCAGCAAGCACCTTGCTGAGCACCAGCCAC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000229384.2 ENSMUST00000229411.2 |
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| 3UTR-3UTR TCA 90 bp | TTGCGGCGTTTTTCTTCTTCCCTCAAAGCCTTCTGGAAAGGGTCGGTGCTAGGACCTGGGCCATCAGGCTaGGGATGGGTGAGTGGGGCC | + |
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Preference number: 2 (lower is better) Translates to: LRRFSSSLKAFWKGSVLGPGPSG*GWVSGA Trigger: GGCCCCACTCACCCATCCTCAGCCTGATGGCCCAGG...TCCTAGCACCGACCCTTTCCAGAAGGCTTTGAGGGAAGAAGAAAAACGCCGCAA 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000229384.2 ENSMUST00000229411.2 ENSMUST00000229597.2 |
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| 3UTR-3UTR GCA 90 bp | ACATCTGCAGCAGTTCCTGCTGCCCCTTACATTCTCCTCACCAGCCTGGGGGAGCTTGCTTCTCTGCACTaGAGAGCCAGGGACTCCCTC | + |
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Preference number: 2 (lower is better) Translates to: TSAAVPAAPYILLTSLGELASLH*RARDSL Trigger: GAGGGAGTCCCTGGCTCTGCAGTGCAGAGAAGCAAG...CTCCCCCAGGCTGGTGAGGAGAATGTAAGGGGCAGCAGGAACTGCTGCAGATGT 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000089174.6 ENSMUST00000229411.2 |
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| 3UTR-3UTR CCA 90 bp | AACTCCTTGCATAGCTTCCTGCTCTGTAGCCTCCTGCTCTGTGGCCACGGGACTGCCAGAGCTCAACCCTaGCTTCTGAGGGCGCAGCAA | + |
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Preference number: 2 (lower is better) Translates to: NSLHSFLLCSLLLCGHGTARAQP*LLRAQQ Trigger: TTGCTGCGCCCTCAGAAGCCAGGGTTGAGCTCTGGC...AGTCCCGTGGCCACAGAGCAGGAGGCTACAGAGCAGGAAGCTATGCAAGGAGTT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000089174.6 ENSMUST00000229411.2 |
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| 3UTR-3UTR TCA 90 bp | CCCTGGAAGCTCAGTCTTTTTGGCCAGAGCTCAACCCTGGCTTCTGAGGGCGCACTGACTGGCCATTGCTaGTTCCTTAGGCCCCTAGCT | + |
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Preference number: 2 (lower is better) Translates to: PWKLSLFGQSSTLASEGALTGHC*FLRPLA Trigger: AGCTAGGGGCCTAAGGAATCAGCAATGGCCAGTCAG...TGCGCCCTCAGAAGCCAGGGTTGAGCTCTGGCCAAAAAGACTGAGCTTCCAGGG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000089174.6 ENSMUST00000229384.2 ENSMUST00000229411.2 |
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| 3UTR-3UTR GCA 90 bp | GCCAGAGCTCAACCCTGGCTTCTGAGGGCGCAGCAAACAGTTCCCATCAGGAAGTCAGGAAGTGGCTGGTaGTCAGCAAGGTGCTTGCTG | + |
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Preference number: 2 (lower is better) Translates to: ARAQPWLLRAQQTVPIRKSGSGW*SARCLL Trigger: CAGCAAGCACCTTGCTGAGCACCAGCCACTTCCTGA...CTTCCTGATGGGAACTGTTTGCTGCGCCCTCAGAAGCCAGGGTTGAGCTCTGGC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000089174.6 ENSMUST00000229384.2 ENSMUST00000229411.2 |
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| 3UTR-3UTR CCA 90 bp | TGGCTGGTGCTCAGCAAGGTGCTTGCTGGGCCTATTCCACAGCCACACAGTTGCCAGCAAGGTGCTTGCTaGGCCTATTCCACAGCCACA | + |
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Preference number: 2 (lower is better) Translates to: WLVLSKVLAGPIPQPHSCQQGAC*AYSTAT Trigger: TGTGGCTGTGGAATAGGCCCAGCAAGCACCTTGCTG...GCAACTGTGTGGCTGTGGAATAGGCCCAGCAAGCACCTTGCTGAGCACCAGCCA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000089174.6 ENSMUST00000229384.2 ENSMUST00000229411.2 |
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| 3UTR-3UTR CCA 90 bp | GGAAGTGGCTGGTGCTCAGCAAGGTGCTTGCTGGGCCTATTCCACAGCCACACAGCAGTGTCCTTTCTGTaGTGTGCTGCAAGACCCTGG | + |
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Preference number: 2 (lower is better) Translates to: GSGWCSARCLLGLFHSHTAVSFL*CAARPW Trigger: CCAGGGTCTTGCAGCACACCACAGAAAGGACACTGC...TGTGTGGCTGTGGAATAGGCCCAGCAAGCACCTTGCTGAGCACCAGCCACTTCC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000089174.6 ENSMUST00000229384.2 ENSMUST00000229411.2 |
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| 3UTR-3UTR TCA 90 bp | ACGCCTGTCTGGTTGCAGAAGCTGATGCCCCAGCGGATCAGGAGGTTCCAGTTGAGTTGCTGCCTCTTCTaGCTGGCCATTGCTGATTCC | + |
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Preference number: 2 (lower is better) Translates to: TPVWLQKLMPQRIRRFQLSCCLF*LAIADS Trigger: GGAATCAGCAATGGCCAGTCAGAAGAGGCAGCAACT...CAACTGGAACCTCCTGATCCGCTGGGGCATCAGCTTCTGCAACCAGACAGGCGT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000229384.2 |
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| 3UTR-3UTR TCA 90 bp | ACAACTCAGACTGGGATCTTGAAATCCTCGGGCCTTTCCGGATCTCCTTCCGCCCTCAACCCTGGCTTCTaGGGGCGCAGCAAACAGTTC | + |
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Preference number: 2 (lower is better) Translates to: TTQTGILKSSGLSGSPSALNPGF*GRSKQF Trigger: GAACTGTTTGCTGCGCCCTCAGAAGCCAGGGTTGAG...GGCGGAAGGAGATCCGGAAAGGCCCGAGGATTTCAAGATCCCAGTCTGAGTTGT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000229384.2 ENSMUST00000229411.2 |
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| 3UTR-3UTR TCA 90 bp | CGAGCAGTGTCCTTTCTGTGGTGTGCTGCAAGACCCTGGAAGCTCAGTCTTTTTCAGGCTGAGGATGGGTaGGTGGGGCCCCTGGTCAAA | + |
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Preference number: 2 (lower is better) Translates to: RAVSFLWCAARPWKLSLFQAEDG*VGPLVK Trigger: TTTGACCAGGGGCCCCACTCACCCATCCTCAGCCTG...AAAAAGACTGAGCTTCCAGGGTCTTGCAGCACACCACAGAAAGGACACTGCTCG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000229384.2 ENSMUST00000229411.2 |
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| 3UTR-3UTR GCA 90 bp | CCCAGGAACACAGTGAGACTGGCTGCAAGCATAGCACCTTCACTTGTAACTCAGCAGTGGCCTGCAGCCTaGCCTCACCAAGGGGATCCA | + |
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Preference number: 2 (lower is better) Translates to: PRNTVRLAASIAPSLVTQQWPAA*PHQGDP Trigger: TGGATCCCCTTGGTGAGGGCAGGCTGCAGGCCACTG...CTGAGTTACAAGTGAAGGTGCTATGCTTGCAGCCAGTCTCACTGTGTTCCTGGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000089174.6 ENSMUST00000229411.2 |
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| 3UTR-3UTR GCA 90 bp | CAGGAAGTGGCTGGTGCTCAGCAAGGTGCTTGCTGGGCCTATTCCACAGCCACAAGAGCCTGGTTCTGTTaGTTCCTTATCAAGGGCGGC | + |
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Preference number: 2 (lower is better) Translates to: QEVAGAQQGACWAYSTATRAWFC*FLIKGG Trigger: GCCGCCCTTGATAAGGAAGCAACAGAACCAGGCTCT...TGTGGCTGTGGAATAGGCCCAGCAAGCACCTTGCTGAGCACCAGCCACTTCCTG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000089174.6 ENSMUST00000229411.2 |
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| 3UTR-3UTR CCA 90 bp | CCCATCAGGAAGTGGCTGGTGCTCAGCAAGGTGCTTGCTGGGCCTATTCCACAGTCAAAGACGCCTGTCTaGTTGCAGAAGCTGATGCCC | + |
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Preference number: 2 (lower is better) Translates to: PIRKWLVLSKVLAGPIPQSKTPV*LQKLMP Trigger: GGGCATCAGCTTCTGCAACCAGACAGGCGTCTTTGA...CTGTGGAATAGGCCCAGCAAGCACCTTGCTGAGCACCAGCCACTTCCTGATGGG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000229384.2 ENSMUST00000229411.2 |
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| 3UTR-3UTR CCA 90 bp | GCGGCGTTTTTCTTCTTCCCTCAAAGCCTTCTGGAAAGGGTCGGTGCTAGGAATGGTGAGTGGGGCCCCTaGTCAAAGACGCCTGTCTGG | + |
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Preference number: 2 (lower is better) Translates to: AAFFFFPQSLLERVGARNGEWGP*SKTPVW Trigger: CCAGACAGGCGTCTTTGACCAGGGGCCCCACTCACC...ATTCCTAGCACCGACCCTTTCCAGAAGGCTTTGAGGGAAGAAGAAAAACGCCGC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000229384.2 ENSMUST00000229411.2 ENSMUST00000229597.2 |
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| 3UTR CAA 90 bp | AGCAAACAGTTCCCATCAGGAAGTGGCTGGTGCTCAGCAAGGTGCTaGCTGGGCCTATTCCACAGCCACACAGTTGCTGCCTCTTCTGAC | + |
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Preference number: 2 (lower is better) Translates to: SKQFPSGSGWCSARC*LGLFHSHTVAASSD Trigger: GTCAGAAGAGGCAGCAACTGTGTGGCTGTGGAATAGGCCCAGCAAGCACCTTGCTGAGCACCAGCCACTTCCTGATGGGAACTGTTTGCT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000089174.6 ENSMUST00000229384.2 ENSMUST00000229411.2 |
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| 3UTR-3UTR TCA 90 bp | TTTTTGGCCAGAGCTCAACCCTGGCTTCTGAGGGCGCAGCAAACAGTTCCCATCCTGACTGGCCATTGCTaGTTCCTTAGGCCCCTAGCT | + |
|
Preference number: 2 (lower is better) Translates to: FLARAQPWLLRAQQTVPILTGHC*FLRPLA Trigger: AGCTAGGGGCCTAAGGAATCAGCAATGGCCAGTCAG...GATGGGAACTGTTTGCTGCGCCCTCAGAAGCCAGGGTTGAGCTCTGGCCAAAAA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000089174.6 ENSMUST00000229384.2 ENSMUST00000229411.2 |
||
| 3UTR-3UTR TCA 90 bp | GACCTAAGCCTAGCTCTTGCTTCTCTGCACTGCAGAGCCAGGGACTCCCTCTTTCTGACTGGCCATTGCTaGTTCCTTAGGCCCCTAGCT | + |
|
Preference number: 2 (lower is better) Translates to: DLSLALASLHCRARDSLFLTGHC*FLRPLA Trigger: AGCTAGGGGCCTAAGGAATCAGCAATGGCCAGTCAG...AAAGAGGGAGTCCCTGGCTCTGCAGTGCAGAGAAGCAAGAGCTAGGCTTAGGTC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000089174.6 ENSMUST00000229411.2 |
||
| 3UTR-3UTR CCA 90 bp | TACTGTTCTGCAGAGAGCTGGACCAGTGACAGGCAGCCCAGGAACACAGTGAGACAGCAAGGTGCTTGCTaGGCCTATTCCACAGCCACA | + |
|
Preference number: 2 (lower is better) Translates to: YCSAESWTSDRQPRNTVRQQGAC*AYSTAT Trigger: TGTGGCTGTGGAATAGGCCCAGCAAGCACCTTGCTG...TCTCACTGTGTTCCTGGGCTGCCTGTCACTGGTCCAGCTCTCTGCAGAACAGTA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000089174.6 ENSMUST00000229411.2 |
||
| 3UTR-3UTR CCA 90 bp | AACACAGTGAGACTGGCTGCAAGCATAGCACCTTCACTTGTAACTCAGAGCCTGTATCAAGGGCGGCAGTaGCCTGCAGCCTGCCCTCAC | + |
|
Preference number: 2 (lower is better) Translates to: NTVRLAASIAPSLVTQSLYQGRQ*PAACPH Trigger: GTGAGGGCAGGCTGCAGGCCACTGCCGCCCTTGATA...CAGGCTCTGAGTTACAAGTGAAGGTGCTATGCTTGCAGCCAGTCTCACTGTGTT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000089174.6 ENSMUST00000229411.2 |
||
| 3UTR-3UTR CCA 90 bp | GTAGAGGTCGGGCTGGGGTGTCTCCACTCCTATAAGCGATACATTTTGGCTTGGTTCTCCTCACCAGCCTaGGGGAGGCCAGTGGATTTG | + |
|
Preference number: 2 (lower is better) Translates to: VEVGLGCLHSYKRYILAWFSSPA*GRPVDL Trigger: CAAATCCACTGGCCTCCCCCAGGCTGGTGAGGAGAA...CCAAGCCAAAATGTATCGCTTATAGGAGTGGAGACACCCCAGCCCGACCTCTAC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000089174.6 ENSMUST00000229411.2 |
||
| 3UTR-3UTR CCA 90 bp | TTCTTGCGGCGTTTTTCTTCTTCCCTCAAAGCCTTCTGGAAAGGGTCGGTGCTAGGTGAGTGGGGCCCCTaGTCAAAGACGCCTGTCTGG | + |
|
Preference number: 2 (lower is better) Translates to: FLRRFSSSLKAFWKGSVLGEWGP*SKTPVW Trigger: CCAGACAGGCGTCTTTGACCAGGGGCCCCACTCACC...TAGCACCGACCCTTTCCAGAAGGCTTTGAGGGAAGAAGAAAAACGCCGCAAGAA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000229384.2 ENSMUST00000229411.2 ENSMUST00000229597.2 |
||
| 3UTR-3UTR CCA 90 bp | GCGGCGTTTTTCTTCTTCCCTCAAAGCCTTCTGGAAAGGGTCGGTGCTAGGAATGTGATCCCCAGCTCCTaGGCCATCAGGCTGAGGATG | + |
|
Preference number: 2 (lower is better) Translates to: AAFFFFPQSLLERVGARNVIPSS*AIRLRM Trigger: CATCCTCAGCCTGATGGCCCAGGAGCTGGGGATCAC...ATTCCTAGCACCGACCCTTTCCAGAAGGCTTTGAGGGAAGAAGAAAAACGCCGC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000229384.2 ENSMUST00000229411.2 ENSMUST00000229597.2 |
||
| 3UTR-3UTR CCA 90 bp | AACTCCTTGCATAGCTTCCTGCTCTGTAGCCTCCTGCTCTGTGGCCACGGGACTTCCCTCAAAGCCTTCTaGAAAGGGTCGGTGCTAGGA | + |
|
Preference number: 2 (lower is better) Translates to: NSLHSFLLCSLLLCGHGTSLKAF*KGSVLG Trigger: TCCTAGCACCGACCCTTTCCAGAAGGCTTTGAGGGA...AGTCCCGTGGCCACAGAGCAGGAGGCTACAGAGCAGGAAGCTATGCAAGGAGTT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000229411.2 |
||
| 3UTR-3UTR TCA 90 bp | CAGTTCCCATCAGGAAGTGGCTGGTGCTCAGCAAGGTGCTTGCTGGGCCTATTCATCGCCGTGAACTCCTaGTCTTGCTTCTATGTCCCA | + |
|
Preference number: 2 (lower is better) Translates to: QFPSGSGWCSARCLLGLFIAVNS*SCFYVP Trigger: TGGGACATAGAAGCAAGATCAGGAGTTCACGGCGAT...GAATAGGCCCAGCAAGCACCTTGCTGAGCACCAGCCACTTCCTGATGGGAACTG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000229384.2 |
||
| 3UTR-3UTR GCA 90 bp | GGGACTCTGAGCCACTGTCTAGTCAATCCAGCTACAGTATCCCATCACAAAGCACTCCCGCAGCTTCCCTaGATGATCCTGTCTGCCGAG | + |
|
Preference number: 2 (lower is better) Translates to: GTLSHCLVNPATVSHHKALPQLP*MILSAE Trigger: CTCGGCAGACAGGATCATGCAGGGAAGCTGCGGGAG...TGCTTTGTGATGGGATACTGTAGCTGGATTGACTAGACAGTGGCTCAGAGTCCC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000089174.6 ENSMUST00000229411.2 |
||
| 3UTR-3UTR GCA 90 bp | GACCTAAGCCTAGCTCTTGCTTCTCTGCACTGCAGAGCCAGGGACTCCCTCTTTAGAGCCTGGTTCTGTTaGTTCCTTATCAAGGGCGGC | + |
|
Preference number: 2 (lower is better) Translates to: DLSLALASLHCRARDSLFRAWFC*FLIKGG Trigger: GCCGCCCTTGATAAGGAAGCAACAGAACCAGGCTCT...AAAGAGGGAGTCCCTGGCTCTGCAGTGCAGAGAAGCAAGAGCTAGGCTTAGGTC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000089174.6 ENSMUST00000229411.2 |
||
| 3UTR-3UTR CCA 90 bp | ACAGTTCCCATCAGGAAGTGGCTGGTGCTCAGCAAGGTGCTTGCTGGGCCTATTGAAGCTCAGTCTTTTTaGCCAGAGCTCAACCCTGGC | + |
|
Preference number: 2 (lower is better) Translates to: TVPIRKWLVLSKVLAGPIEAQSF*PELNPG Trigger: GCCAGGGTTGAGCTCTGGCCAAAAAGACTGAGCTTC...AATAGGCCCAGCAAGCACCTTGCTGAGCACCAGCCACTTCCTGATGGGAACTGT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000089174.6 ENSMUST00000229384.2 ENSMUST00000229411.2 |
||
| 3UTR-3UTR CCA 90 bp | TTTTTGGCCAGAGCTCAACCCTGGCTTCTGAGGGCGCAGCAAACAGTTCCCATCGAAGCTCAGTCTTTTTaGCCAGAGCTCAACCCTGGC | + |
|
Preference number: 2 (lower is better) Translates to: FLARAQPWLLRAQQTVPIEAQSF*PELNPG Trigger: GCCAGGGTTGAGCTCTGGCCAAAAAGACTGAGCTTC...GATGGGAACTGTTTGCTGCGCCCTCAGAAGCCAGGGTTGAGCTCTGGCCAAAAA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 3 transcripts: ENSMUST00000089174.6 ENSMUST00000229384.2 ENSMUST00000229411.2 |
||
| 3UTR-3UTR CCA 90 bp | TTCTTGCGGCGTTTTTCTTCTTCCCTCAAAGCCTTCTGGAAAGGGTCGGTGCTAGTGATCCCCAGCTCCTaGGCCATCAGGCTGAGGATG | + |
|
Preference number: 2 (lower is better) Translates to: FLRRFSSSLKAFWKGSVLVIPSS*AIRLRM Trigger: CATCCTCAGCCTGATGGCCCAGGAGCTGGGGATCAC...TAGCACCGACCCTTTCCAGAAGGCTTTGAGGGAAGAAGAAAAACGCCGCAAGAA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000229384.2 ENSMUST00000229411.2 ENSMUST00000229597.2 |
||
| 3UTR-3UTR CCA 90 bp | CGAGCAGTGTCCTTTCTGTGGTGTGCTGCAAGACCCTGGAAGCTCAGTCTTTTTCAGCAAGGTGCTTGCTaGGCCTATTCCACAGCCACA | + |
|
Preference number: 2 (lower is better) Translates to: RAVSFLWCAARPWKLSLFQQGAC*AYSTAT Trigger: TGTGGCTGTGGAATAGGCCCAGCAAGCACCTTGCTG...AAAAAGACTGAGCTTCCAGGGTCTTGCAGCACACCACAGAAAGGACACTGCTCG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000089174.6 ENSMUST00000229384.2 ENSMUST00000229411.2 |
||
| 3UTR-3UTR CCA 90 bp | CTACAGTATCCCATCACAAAGCACAGCCTCCTGCAACCTGTCCCCCATAGACAGGAAGCTCAGTCTTTTTaGCCAGAGCTCAACCCTGGC | + |
|
Preference number: 2 (lower is better) Translates to: LQYPITKHSLLQPVPHRQEAQSF*PELNPG Trigger: GCCAGGGTTGAGCTCTGGCCAAAAAGACTGAGCTTC...CTGTCTATGGGGGACAGGTTGCAGGAGGCTGTGCTTTGTGATGGGATACTGTAG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000089174.6 ENSMUST00000229411.2 |
||
| 3UTR-3UTR GCA 90 bp | GGGACTCTGAGCCACTGTCTAGTCAATCCAGCTACAGTATCCCATCACAAAGCATCAGGAAGTGGCTGGTaGTCAGCAAGGTGCTTGCTG | + |
|
Preference number: 2 (lower is better) Translates to: GTLSHCLVNPATVSHHKASGSGW*SARCLL Trigger: CAGCAAGCACCTTGCTGAGCACCAGCCACTTCCTGA...TGCTTTGTGATGGGATACTGTAGCTGGATTGACTAGACAGTGGCTCAGAGTCCC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000089174.6 ENSMUST00000229411.2 |
||
| 3UTR-3UTR CCA 90 bp | GGGAAGAGAAAGAACAGGACAGGTCAGGCTAAGACTCAGGTCTCAATTGAGCACGCAGTGTCCTTTCTGTaGTGTGCTGCAAGACCCTGG | + |
|
Preference number: 2 (lower is better) Translates to: GKRKNRTGQAKTQVSIEHAVSFL*CAARPW Trigger: CCAGGGTCTTGCAGCACACCACAGAAAGGACACTGC...GTGCTCAATTGAGACCTGAGTCTTAGCCTGACCTGTCCTGTTCTTTCTCTTCCC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000089174.6 ENSMUST00000229411.2 |
||
| 3UTR-3UTR CCA 90 bp | CAGGGAAGAGAAAGAACAGGACAGGTCAGGCTAAGACTCAGGTCTCAATTGAGCGCAGTGTCCTTTCTGTaGTGTGCTGCAAGACCCTGG | + |
|
Preference number: 2 (lower is better) Translates to: QGRERTGQVRLRLRSQLSAVSFL*CAARPW Trigger: CCAGGGTCTTGCAGCACACCACAGAAAGGACACTGC...GCTCAATTGAGACCTGAGTCTTAGCCTGACCTGTCCTGTTCTTTCTCTTCCCTG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000089174.6 ENSMUST00000229411.2 |
||
| 3UTR-3UTR CCA 90 bp | GAGCCACTGTCTAGTCAATCCAGCTACAGTATCCCATCACAAAGCACAGCCTCCTCAAAGACGCCTGTCTaGTTGCAGAAGCTGATGCCC | + |
|
Preference number: 2 (lower is better) Translates to: EPLSSQSSYSIPSQSTASSKTPV*LQKLMP Trigger: GGGCATCAGCTTCTGCAACCAGACAGGCGTCTTTGA...GGAGGCTGTGCTTTGTGATGGGATACTGTAGCTGGATTGACTAGACAGTGGCTC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000229411.2 |
||
| 3UTR-3UTR TCA 90 bp | GGGAAGAGAAAGAACAGGACAGGTCAGGCTAAGACTCAGGTCTCAATTGAGCACAGTTGCTGCCTCTTCTaGCTGGCCATTGCTGATTCC | + |
|
Preference number: 2 (lower is better) Translates to: GKRKNRTGQAKTQVSIEHSCCLF*LAIADS Trigger: GGAATCAGCAATGGCCAGTCAGAAGAGGCAGCAACT...GTGCTCAATTGAGACCTGAGTCTTAGCCTGACCTGTCCTGTTCTTTCTCTTCCC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000089174.6 ENSMUST00000229411.2 |
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| 3UTR-3UTR TCA 90 bp | GGGACTCTGAGCCACTGTCTAGTCAATCCAGCTACAGTATCCCATCACAAAGCAAACCAGGCTGCCTTCTaGAGGCCTAACTCCTTGCAT | + |
|
Preference number: 2 (lower is better) Translates to: GTLSHCLVNPATVSHHKANQAAF*RPNSLH Trigger: ATGCAAGGAGTTAGGCCTTCAGAAGGCAGCCTGGTT...TGCTTTGTGATGGGATACTGTAGCTGGATTGACTAGACAGTGGCTCAGAGTCCC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000089174.6 ENSMUST00000229411.2 |
||
| 3UTR-3UTR GCA 90 bp | GTCTGTTTTAAACGGGTTCCGGAAGTCAGAATCTTTCTCAGTGATCCCCAGCTCTCAGGAAGTGGCTGGTaGTCAGCAAGGTGCTTGCTG | + |
|
Preference number: 2 (lower is better) Translates to: VCFKRVPEVRIFLSDPQLSGSGW*SARCLL Trigger: CAGCAAGCACCTTGCTGAGCACCAGCCACTTCCTGA...GAGCTGGGGATCACTGAGAAAGATTCTGACTTCCGGAACCCGTTTAAAACAGAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000229384.2 ENSMUST00000229411.2 |
||
| 3UTR-3UTR GCA 90 bp | CTAGTCAATCCAGCTACAGTATCCCATCACAAAGCACAGCCTCCTGCAACCTGTTGCAGCAGTTCCTGCTaGCCCTTACATTCTCCTCAC | + |
|
Preference number: 2 (lower is better) Translates to: LVNPATVSHHKAQPPATCCSSSC*PLHSPH Trigger: GTGAGGAGAATGTAAGGGGCAGCAGGAACTGCTGCA...ACAGGTTGCAGGAGGCTGTGCTTTGTGATGGGATACTGTAGCTGGATTGACTAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000089174.6 ENSMUST00000229411.2 |
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| 3UTR-3UTR GCA 90 bp | GAGCCACTGTCTAGTCAATCCAGCTACAGTATCCCATCACAAAGCACAGCCTCCATCTGCAGCAGTTCCTaGTGCCCCTTACATTCTCCT | + |
|
Preference number: 2 (lower is better) Translates to: EPLSSQSSYSIPSQSTASICSSS*CPLHSP Trigger: AGGAGAATGTAAGGGGCAGCAGGAACTGCTGCAGAT...GGAGGCTGTGCTTTGTGATGGGATACTGTAGCTGGATTGACTAGACAGTGGCTC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000089174.6 ENSMUST00000229411.2 |
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| 3UTR-3UTR TCA 90 bp | TGTAATTTCAATAGAACCAAGGCAGCCACCTGCCTTGAGACTCATAGAAACCAGCTCAACCCTGGCTTCTaGGGGCGCAGCAAACAGTTC | + |
|
Preference number: 2 (lower is better) Translates to: CNFNRTKAATCLETHRNQLNPGF*GRSKQF Trigger: GAACTGTTTGCTGCGCCCTCAGAAGCCAGGGTTGAG...CTGGTTTCTATGAGTCTCAAGGCAGGTGGCTGCCTTGGTTCTATTGAAATTACA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000089174.6 ENSMUST00000229411.2 |
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| 3UTR-3UTR GCA 90 bp | AAGAGGTGGAGCTGTAATTTCAATAGAACCAAGGCAGCCACCTGCCTTGAGACTCTTTCTGTGGTGTGCTaGAAGACCCTGGAAGCTCAG | + |
|
Preference number: 2 (lower is better) Translates to: KRWSCNFNRTKAATCLETLSVVC*KTLEAQ Trigger: CTGAGCTTCCAGGGTCTTGCAGCACACCACAGAAAG...AGTCTCAAGGCAGGTGGCTGCCTTGGTTCTATTGAAATTACAGCTCCACCTCTT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000089174.6 ENSMUST00000229411.2 |
||
| 3UTR-3UTR GCA 90 bp | AGGGTCGGTGCTAGGAATAAACTCTGTCTGGTCTGTTTTAAACGGGTTCCGGAACTTTCTGTGGTGTGCTaGAAGACCCTGGAAGCTCAG | + |
|
Preference number: 2 (lower is better) Translates to: RVGARNKLCLVCFKRVPELSVVC*KTLEAQ Trigger: CTGAGCTTCCAGGGTCTTGCAGCACACCACAGAAAG...TTCCGGAACCCGTTTAAAACAGACCAGACAGAGTTTATTCCTAGCACCGACCCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000229384.2 ENSMUST00000229411.2 |
||
| 3UTR-3UTR GCA 90 bp | CAGGGAAGAGAAAGAACAGGACAGGTCAGGCTAAGACTCAGGTCTCAATTGAGCATCTGCAGCAGTTCCTaGTGCCCCTTACATTCTCCT | + |
|
Preference number: 2 (lower is better) Translates to: QGRERTGQVRLRLRSQLSICSSS*CPLHSP Trigger: AGGAGAATGTAAGGGGCAGCAGGAACTGCTGCAGAT...GCTCAATTGAGACCTGAGTCTTAGCCTGACCTGTCCTGTTCTTTCTCTTCCCTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000089174.6 ENSMUST00000229411.2 |
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| 3UTR-3UTR CCA 90 bp | CTAGGAATAAACTCTGTCTGGTCTGTTTTAAACGGGTTCCGGAAGTCAGAATCTGTGGTGGACAATCTTTaGGAAGCGCAGCACGACGTC | + |
|
Preference number: 2 (lower is better) Translates to: LGINSVWSVLNGFRKSESVVDNL*EAQHDV Trigger: GACGTCGTGCTGCGCTTCCCAAAGATTGTCCACCAC...AGATTCTGACTTCCGGAACCCGTTTAAAACAGACCAGACAGAGTTTATTCCTAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000229384.2 ENSMUST00000229597.2 |
||
| 3UTR-3UTR CCA 90 bp | GAGAGAGAGAGAGAGAGACCTAAGCCTAGCTCTTGCTTCTCTGCACTGCAGAGCGGAATAAACTCTGTCTaGTCTGTTTTAAACGGGTTC | + |
|
Preference number: 2 (lower is better) Translates to: ERERERPKPSSCFSALQSGINSV*SVLNGF Trigger: GAACCCGTTTAAAACAGACCAGACAGAGTTTATTCC...GCTCTGCAGTGCAGAGAAGCAAGAGCTAGGCTTAGGTCTCTCTCTCTCTCTCTC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000229411.2 |
||
| 3UTR-3UTR CCA 90 bp | GAGCTTGTCAGAGGATTCAGACACCATCAAATTTATTTTACCAATGAAGGCACATTCTCCTCACCAGCCTaGGGGAGGCCAGTGGATTTG | + |
|
Preference number: 2 (lower is better) Translates to: ELVRGFRHHQIYFTNEGTFSSPA*GRPVDL Trigger: CAAATCCACTGGCCTCCCCCAGGCTGGTGAGGAGAA...TGTGCCTTCATTGGTAAAATAAATTTGATGGTGTCTGAATCCTCTGACAAGCTC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000089174.6 ENSMUST00000229411.2 |
||
| 3UTR-3UTR CCA 90 bp | GTCTGTTTTAAACGGGTTCCGGAAGTCAGAATCTTTCTCAGTGATCCCCAGCTCTCAGGAGGTTCCAGTTaGAATTATGGTCAAAGTAGT | + |
|
Preference number: 2 (lower is better) Translates to: VCFKRVPEVRIFLSDPQLSGGSS*NYGQSS Trigger: ACTACTTTGACCATAATTCCAACTGGAACCTCCTGA...GAGCTGGGGATCACTGAGAAAGATTCTGACTTCCGGAACCCGTTTAAAACAGAC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000229384.2 ENSMUST00000229597.2 |
||
| 3UTR CCA 72 bp | AGCCTGGTTCTGTTGCTTCCTTATCAAGGGCGGCAGTaGCCTGCAGCCTGCCCTCACCAAGGGGATCCAGGC | + |
|
Preference number: 3 (lower is better) Translates to: SLVLLLPYQGRQ*PAACPHQGDPG Trigger: GCCTGGATCCCCTTGGTGAGGGCAGGCTGCAGGCCACTGCCGCCCTTGATAAGGAAGCAACAGAACCAGGCT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000089174.6 ENSMUST00000229411.2 |
||
| 3UTR GCA 72 bp | GGGCGCAGCAAACAGTTCCCATCAGGAAGTGGCTGGTaGTCAGCAAGGTGCTTGCTGGGCCTATTCCACAGC | + |
|
Preference number: 3 (lower is better) Translates to: GRSKQFPSGSGW*SARCLLGLFHS Trigger: GCTGTGGAATAGGCCCAGCAAGCACCTTGCTGAGCACCAGCCACTTCCTGATGGGAACTGTTTGCTGCGCCC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000089174.6 ENSMUST00000229384.2 ENSMUST00000229411.2 |
||
| 3UTR GCA 72 bp | TTGCTTCCTTATCAAGGGCGGCAGTGGCCTGCAGCCTaGCCTCACCAAGGGGATCCAGGCCAGAAGTTCCTT | + |
|
Preference number: 3 (lower is better) Translates to: LLPYQGRQWPAA*PHQGDPGQKFL Trigger: AAGGAACTTCTGGCCTGGATCCCCTTGGTGAGGGCAGGCTGCAGGCCACTGCCGCCCTTGATAAGGAAGCAA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000089174.6 ENSMUST00000229411.2 |
||
| 3UTR GCA 72 bp | GTTCTCCAGGCTGGTCCTGACATCTGCAGCAGTTCCTaGTGCCCCTTACATTCTCCTCACCAGCCTGGGGGA | + |
|
Preference number: 3 (lower is better) Translates to: VLQAGPDICSSS*CPLHSPHQPGG Trigger: TCCCCCAGGCTGGTGAGGAGAATGTAAGGGGCAGCAGGAACTGCTGCAGATGTCAGGACCAGCCTGGAGAAC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000089174.6 ENSMUST00000229411.2 |
||
| 3UTR-3UTR CAA 90 bp | GTGGCTGGTGCTCAGCAAGGTGCTTGCTGGGCCTATTCCACAGCCACACAGTTGTGCTCAGCAAGGTGCTaGCTGGGCCTATTCCACAGC | + |
|
Preference number: 3 (lower is better) Translates to: VAGAQQGACWAYSTATQLCSARC*LGLFHS Trigger: GCTGTGGAATAGGCCCAGCAAGCACCTTGCTGAGCA...CAACTGTGTGGCTGTGGAATAGGCCCAGCAAGCACCTTGCTGAGCACCAGCCAC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000089174.6 ENSMUST00000229384.2 ENSMUST00000229411.2 |
||
| 3UTR-3UTR CAA 90 bp | TGCTCAGCAAGGTGCTTGCTGGGCCTATTCCACAGCCACACAGTTGCTGCCTCTTGCTCAGCAAGGTGCTaGCTGGGCCTATTCCACAGC | + |
|
Preference number: 3 (lower is better) Translates to: CSARCLLGLFHSHTVAASCSARC*LGLFHS Trigger: GCTGTGGAATAGGCCCAGCAAGCACCTTGCTGAGCA...AGAGGCAGCAACTGTGTGGCTGTGGAATAGGCCCAGCAAGCACCTTGCTGAGCA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000089174.6 ENSMUST00000229384.2 ENSMUST00000229411.2 |
||
| 3UTR TCA 72 bp | GCCCCTGGTCAAAGACGCCTGTCTGGTTGCAGAAGCTaGTGCCCCAGCGGATCAGGAGGTTCCAGTTGGAAT | + |
|
Preference number: 3 (lower is better) Translates to: APGQRRLSGCRS*CPSGSGGSSWN Trigger: ATTCCAACTGGAACCTCCTGATCCGCTGGGGCATCAGCTTCTGCAACCAGACAGGCGTCTTTGACCAGGGGC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000229384.2 ENSMUST00000229597.2 |
||
| 3UTR GCA 72 bp | TCCCATCAGGAAGTGGCTGGTGCTCAGCAAGGTGCTTaGTGGGCCTATTCCACAGCCACACAGTTGCTGCCT | + |
|
Preference number: 3 (lower is better) Translates to: SHQEVAGAQQGA*WAYSTATQLLP Trigger: AGGCAGCAACTGTGTGGCTGTGGAATAGGCCCAGCAAGCACCTTGCTGAGCACCAGCCACTTCCTGATGGGA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000089174.6 ENSMUST00000229384.2 ENSMUST00000229411.2 |
||
| 3UTR GCA 72 bp | GAAGTTCCTTCAGCCAGCCTCCTCCCGCAGCTTCCCTaGATGATCCTGTCTGCCGAGCAGTGTCCTTTCTGT | + |
|
Preference number: 3 (lower is better) Translates to: EVPSASLLPQLP*MILSAEQCPFC Trigger: ACAGAAAGGACACTGCTCGGCAGACAGGATCATGCAGGGAAGCTGCGGGAGGAGGCTGGCTGAAGGAACTTC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000089174.6 ENSMUST00000229411.2 |
||
| 3UTR GCA 72 bp | CTGCCTTCTGAAGGCCTAACTCCTTGCATAGCTTCCTaGTCTGTAGCCTCCTGCTCTGTGGCCACGGGACTC | + |
|
Preference number: 3 (lower is better) Translates to: LPSEGLTPCIAS*SVASCSVATGL Trigger: GAGTCCCGTGGCCACAGAGCAGGAGGCTACAGAGCAGGAAGCTATGCAAGGAGTTAGGCCTTCAGAAGGCAG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000089174.6 ENSMUST00000229411.2 |
||
| 3UTR-3UTR CAA 90 bp | CTGGTCCTGACATCTGCAGCAGTTCCTGCTGCCCCTTACATTCTCCTCACCAGCCAGAGCCTGGTTCTGTaGCTTCCTTATCAAGGGCGG | + |
|
Preference number: 3 (lower is better) Translates to: LVLTSAAVPAAPYILLTSQSLVL*LPYQGR Trigger: CCGCCCTTGATAAGGAAGCAACAGAACCAGGCTCTG...GCTGGTGAGGAGAATGTAAGGGGCAGCAGGAACTGCTGCAGATGTCAGGACCAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000089174.6 ENSMUST00000229411.2 |
||
| 3UTR-3UTR CAA 90 bp | TCCCATCAGGAAGTGGCTGGTGCTCAGCAAGGTGCTTGCTGGGCCTATTCCACACGCCTCTCCTCCTTCTaGCGGCGTTTTTCTTCTTCC | + |
|
Preference number: 3 (lower is better) Translates to: SHQEVAGAQQGACWAYSTRLSSF*RRFSSS Trigger: GGAAGAAGAAAAACGCCGCAAGAAGGAGGAGAGGCG...TGTGGAATAGGCCCAGCAAGCACCTTGCTGAGCACCAGCCACTTCCTGATGGGA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000229384.2 ENSMUST00000229411.2 |
||
| 3UTR TCA 72 bp | GCTCAGTCTTTTTGGCCAGAGCTCAACCCTGGCTTCTaGGGGCGCAGCAAACAGTTCCCATCAGGAAGTGGC | + |
|
Preference number: 3 (lower is better) Translates to: AQSFWPELNPGF*GRSKQFPSGSG Trigger: GCCACTTCCTGATGGGAACTGTTTGCTGCGCCCTCAGAAGCCAGGGTTGAGCTCTGGCCAAAAAGACTGAGC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000089174.6 ENSMUST00000229384.2 ENSMUST00000229411.2 |
||
| 3UTR TCA 72 bp | CTAGCTGGTCCAGGGCTACAACTCAGACTGGGATCTTaGAATCCTCGGGCCTTTCCGGATCTCCTTCCGCCT | + |
|
Preference number: 3 (lower is better) Translates to: LAGPGLQLRLGS*NPRAFPDLLPP Trigger: AGGCGGAAGGAGATCCGGAAAGGCCCGAGGATTTCAAGATCCCAGTCTGAGTTGTAGCCCTGGACCAGCTAG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000229384.2 ENSMUST00000229411.2 |
||
| 3UTR GCA 72 bp | CAGTTCCCATCAGGAAGTGGCTGGTGCTCAGCAAGGTaGTTGCTGGGCCTATTCCACAGCCACACAGTTGCT | + |
|
Preference number: 3 (lower is better) Translates to: QFPSGSGWCSAR*LLGLFHSHTVA Trigger: AGCAACTGTGTGGCTGTGGAATAGGCCCAGCAAGCACCTTGCTGAGCACCAGCCACTTCCTGATGGGAACTG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000089174.6 ENSMUST00000229384.2 ENSMUST00000229411.2 |
||
| 3UTR CCA 72 bp | CATCAGGAAGTGGCTGGTGCTCAGCAAGGTGCTTGCTaGGCCTATTCCACAGCCACACAGTTGCTGCCTCTT | + |
|
Preference number: 3 (lower is better) Translates to: HQEVAGAQQGAC*AYSTATQLLPL Trigger: AAGAGGCAGCAACTGTGTGGCTGTGGAATAGGCCCAGCAAGCACCTTGCTGAGCACCAGCCACTTCCTGATG 57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000089174.6 ENSMUST00000229384.2 ENSMUST00000229411.2 |
||
| 3UTR CCA 72 bp | CCTGGAAGCTCAGTCTTTTTGGCCAGAGCTCAACCCTaGCTTCTGAGGGCGCAGCAAACAGTTCCCATCAGG | + |
|
Preference number: 3 (lower is better) Translates to: PGSSVFLARAQP*LLRAQQTVPIR Trigger: CCTGATGGGAACTGTTTGCTGCGCCCTCAGAAGCCAGGGTTGAGCTCTGGCCAAAAAGACTGAGCTTCCAGG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000089174.6 ENSMUST00000229384.2 ENSMUST00000229411.2 |
||
| 3UTR-3UTR CAA 90 bp | TTTTTGGCCAGAGCTCAACCCTGGCTTCTGAGGGCGCAGCAAACAGTTCCCATCAGTGGTGGACAATCTTaGGGAAGCGCAGCACGACGT | + |
|
Preference number: 3 (lower is better) Translates to: FLARAQPWLLRAQQTVPISGGQS*GSAARR Trigger: ACGTCGTGCTGCGCTTCCCAAAGATTGTCCACCACT...GATGGGAACTGTTTGCTGCGCCCTCAGAAGCCAGGGTTGAGCTCTGGCCAAAAA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000229384.2 |
||
| 3UTR-3UTR CAA 90 bp | AACAGTTCCCATCAGGAAGTGGCTGGTGCTCAGCAAGGTGCTTGCTGGGCCTATCGCCTCTCCTCCTTCTaGCGGCGTTTTTCTTCTTCC | + |
|
Preference number: 3 (lower is better) Translates to: NSSHQEVAGAQQGACWAYRLSSF*RRFSSS Trigger: GGAAGAAGAAAAACGCCGCAAGAAGGAGGAGAGGCG...ATAGGCCCAGCAAGCACCTTGCTGAGCACCAGCCACTTCCTGATGGGAACTGTT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000229384.2 ENSMUST00000229411.2 |
||
| 3UTR TCA 72 bp | CTCTTTCCGAGGCAGAAACGTTCTCCAGGCTGGTCCTaGCATCTGCAGCAGTTCCTGCTGCCCCTTACATTC | + |
|
Preference number: 3 (lower is better) Translates to: LFPRQKRSPGWS*HLQQFLLPLTF Trigger: GAATGTAAGGGGCAGCAGGAACTGCTGCAGATGTCAGGACCAGCCTGGAGAACGTTTCTGCCTCGGAAAGAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000089174.6 ENSMUST00000229411.2 |
||
| 3UTR GCA 72 bp | TCCTGTCTGCCGAGCAGTGTCCTTTCTGTGGTGTGCTaGAAGACCCTGGAAGCTCAGTCTTTTTGGCCAGAG | + |
|
Preference number: 3 (lower is better) Translates to: SCLPSSVLSVVC*KTLEAQSFWPE Trigger: CTCTGGCCAAAAAGACTGAGCTTCCAGGGTCTTGCAGCACACCACAGAAAGGACACTGCTCGGCAGACAGGA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000089174.6 ENSMUST00000229384.2 ENSMUST00000229411.2 |
||
| 3UTR GCA 72 bp | GAGAGAGACCTAAGCCTAGCTCTTGCTTCTCTGCACTaGAGAGCCAGGGACTCCCTCTTTCCGAGGCAGAAA | + |
|
Preference number: 3 (lower is better) Translates to: ERDLSLALASLH*RARDSLFPRQK Trigger: TTTCTGCCTCGGAAAGAGGGAGTCCCTGGCTCTGCAGTGCAGAGAAGCAAGAGCTAGGCTTAGGTCTCTCTC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000089174.6 ENSMUST00000229411.2 |
||
| 3UTR CCA 72 bp | CGAGCAGTGTCCTTTCTGTGGTGTGCTGCAAGACCCTaGAAGCTCAGTCTTTTTGGCCAGAGCTCAACCCTG | + |
|
Preference number: 3 (lower is better) Translates to: RAVSFLWCAARP*KLSLFGQSSTL Trigger: CAGGGTTGAGCTCTGGCCAAAAAGACTGAGCTTCCAGGGTCTTGCAGCACACCACAGAAAGGACACTGCTCG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000089174.6 ENSMUST00000229384.2 ENSMUST00000229411.2 |
||
| 3UTR TCA 72 bp | GACACTTCTGAGTCCCCTCTGGAAACTGGCCTGTCATaGAGGGCAGCAGTGAGTGAGAGAGAGAGAGAGAGA | + |
|
Preference number: 3 (lower is better) Translates to: DTSESPLETGLS*RAAVSERERER Trigger: TCTCTCTCTCTCTCTCTCACTCACTGCTGCCCTTCATGACAGGCCAGTTTCCAGAGGGGACTCAGAAGTGTC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000089174.6 ENSMUST00000229411.2 |
||
| 3UTR TCA 72 bp | CACCACGTGCGAGAAAGATGGAACCCAGGATCGCCGTaGACTCCTGATCTTGCTTCTATGTCCCAAGTGCTG | + |
|
Preference number: 3 (lower is better) Translates to: HHVRERWNPGSP*TPDLASMSQVL Trigger: CAGCACTTGGGACATAGAAGCAAGATCAGGAGTTCACGGCGATCCTGGGTTCCATCTTTCTCGCACGTGGTG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000229384.2 |
||
| 3UTR TCA 72 bp | TCTGGAAACTGGCCTGTCATGAAGGGCAGCAGTGAGTaGGAGAGAGAGAGAGAGAGACCTAAGCCTAGCTCT | + |
|
Preference number: 3 (lower is better) Translates to: SGNWPVMKGSSE*ERERERPKPSS Trigger: AGAGCTAGGCTTAGGTCTCTCTCTCTCTCTCTCTCACTCACTGCTGCCCTTCATGACAGGCCAGTTTCCAGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000089174.6 ENSMUST00000229411.2 |
||
| 3UTR TCA 72 bp | GGTCTCCTTGAAATAAACACCCTCTCAGGACACTTCTaGGTCCCCTCTGGAAACTGGCCTGTCATGAAGGGC | + |
|
Preference number: 3 (lower is better) Translates to: GLLEINTLSGHF*VPSGNWPVMKG Trigger: GCCCTTCATGACAGGCCAGTTTCCAGAGGGGACTCAGAAGTGTCCTGAGAGGGTGTTTATTTCAAGGAGACC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000089174.6 ENSMUST00000229411.2 |
||
| 3UTR GCA 72 bp | ATAGAAACCAGGCTGCCTTCTGAAGGCCTAACTCCTTaGATAGCTTCCTGCTCTGTAGCCTCCTGCTCTGTG | + |
|
Preference number: 3 (lower is better) Translates to: IETRLPSEGLTP*IASCSVASCSV Trigger: CACAGAGCAGGAGGCTACAGAGCAGGAAGCTATGCAAGGAGTTAGGCCTTCAGAAGGCAGCCTGGTTTCTAT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000089174.6 ENSMUST00000229411.2 |
||
| 3UTR CCA 72 bp | CTGCATGATCCTGTCTGCCGAGCAGTGTCCTTTCTGTaGTGTGCTGCAAGACCCTGGAAGCTCAGTCTTTTT | + |
|
Preference number: 3 (lower is better) Translates to: LHDPVCRAVSFL*CAARPWKLSLF Trigger: AAAAAGACTGAGCTTCCAGGGTCTTGCAGCACACCACAGAAAGGACACTGCTCGGCAGACAGGATCATGCAG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000089174.6 ENSMUST00000229411.2 |
||
| 3UTR TCA 72 bp | ACCTGCCTTGAGACTCATAGAAACCAGGCTGCCTTCTaGAGGCCTAACTCCTTGCATAGCTTCCTGCTCTGT | + |
|
Preference number: 3 (lower is better) Translates to: TCLETHRNQAAF*RPNSLHSFLLC Trigger: ACAGAGCAGGAAGCTATGCAAGGAGTTAGGCCTTCAGAAGGCAGCCTGGTTTCTATGAGTCTCAAGGCAGGT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000089174.6 ENSMUST00000229411.2 |
||
| 3UTR-3UTR CAA 90 bp | TGTAATTTCAATAGAACCAAGGCAGCCACCTGCCTTGAGACTCATAGAAACCAGAGGCAGCCACCTGCCTaGAGACTCATAGAAACCAGG | + |
|
Preference number: 3 (lower is better) Translates to: CNFNRTKAATCLETHRNQRQPPA*RLIETR Trigger: CCTGGTTTCTATGAGTCTCAAGGCAGGTGGCTGCCT...CTGGTTTCTATGAGTCTCAAGGCAGGTGGCTGCCTTGGTTCTATTGAAATTACA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000089174.6 ENSMUST00000229411.2 |
||
| 3UTR CCA 72 bp | TTCTTGCGGCGTTTTTCTTCTTCCCTCAAAGCCTTCTaGAAAGGGTCGGTGCTAGGAATAAACTCTGTCTGG | + |
|
Preference number: 3 (lower is better) Translates to: FLRRFSSSLKAF*KGSVLGINSVW Trigger: CCAGACAGAGTTTATTCCTAGCACCGACCCTTTCCAGAAGGCTTTGAGGGAAGAAGAAAAACGCCGCAAGAA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000229384.2 ENSMUST00000229411.2 ENSMUST00000229597.2 |
||
| 3UTR CCA 72 bp | GGGTGTCTCCACTCCTATAAGCGATACATTTTGGCTTaGCAAGATCAAAGAGGTGGAGCTGTAATTTCAATA | + |
|
Preference number: 3 (lower is better) Translates to: GCLHSYKRYILA*QDQRGGAVISI Trigger: TATTGAAATTACAGCTCCACCTCTTTGATCTTGCCAAGCCAAAATGTATCGCTTATAGGAGTGGAGACACCC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000089174.6 ENSMUST00000229411.2 |
||
| 3UTR TCA 72 bp | TCTGAGAATAGAGATCATGTTCTTTTAAGGTCTCCTTaGAATAAACACCCTCTCAGGACACTTCTGAGTCCC | + |
|
Preference number: 3 (lower is better) Translates to: SENRDHVLLRSP*NKHPLRTLLSP Trigger: GGGACTCAGAAGTGTCCTGAGAGGGTGTTTATTTCAAGGAGACCTTAAAAGAACATGATCTCTATTCTCAGA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000089174.6 ENSMUST00000229411.2 |
||
| 3UTR-3UTR CAA 90 bp | TGTAATTTCAATAGAACCAAGGCAGCCACCTGCCTTGAGACTCATAGAAACCAGTATAAGCGATACATTTaGGCTTGGCAAGATCAAAGA | + |
|
Preference number: 3 (lower is better) Translates to: CNFNRTKAATCLETHRNQYKRYI*AWQDQR Trigger: TCTTTGATCTTGCCAAGCCAAAATGTATCGCTTATA...CTGGTTTCTATGAGTCTCAAGGCAGGTGGCTGCCTTGGTTCTATTGAAATTACA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000089174.6 ENSMUST00000229411.2 |
||
| CDS-3UTR TCA 90 bp | CTGCACTGCAGAGCCAGGGACTCCCTCTTTCCGAGGCAGAAACGTTCTCCAGGCCCTGGGCCATCAGGCTaGGGATGGGTGAGTGGGGCC | + |
|
Preference number: 4 (lower is better) Translates to: LHCRARDSLFPRQKRSPGPGPSG*GWVSGA Trigger: GGCCCCACTCACCCATCCTCAGCCTGATGGCCCAGG...GCCTGGAGAACGTTTCTGCCTCGGAAAGAGGGAGTCCCTGGCTCTGCAGTGCAG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000089174.6 |
||
| CDS-3UTR CCA 90 bp | GGCCTGCAGCCTGCCCTCACCAAGGGGATCCAGGCCAGAAGTTCCTTCAGCCAGGGTGAGTGGGGCCCCTaGTCAAAGACGCCTGTCTGG | + |
|
Preference number: 4 (lower is better) Translates to: GLQPALTKGIQARSSFSQGEWGP*SKTPVW Trigger: CCAGACAGGCGTCTTTGACCAGGGGCCCCACTCACC...CTGGCTGAAGGAACTTCTGGCCTGGATCCCCTTGGTGAGGGCAGGCTGCAGGCC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000089174.6 |
||
| CDS-3UTR CCA 90 bp | TTATCAAGGGCGGCAGTGGCCTGCAGCCTGCCCTCACCAAGGGGATCCAGGCCAGTGGTGGACAATCTTTaGGAAGCGCAGCACGACGTC | + |
|
Preference number: 4 (lower is better) Translates to: LSRAAVACSLPSPRGSRPVVDNL*EAQHDV Trigger: GACGTCGTGCTGCGCTTCCCAAAGATTGTCCACCAC...TGGCCTGGATCCCCTTGGTGAGGGCAGGCTGCAGGCCACTGCCGCCCTTGATAA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000089174.6 ENSMUST00000229411.2 |
||
| CDS-3UTR TCA 90 bp | CAGGAAGTGGCTGGTGCTCAGCAAGGTGCTTGCTGGGCCTATTCCACAGCCACATCTGGTTGCAGAAGCTaGTGCCCCAGCGGATCAGGA | + |
|
Preference number: 4 (lower is better) Translates to: QEVAGAQQGACWAYSTATSGCRS*CPSGSG Trigger: TCCTGATCCGCTGGGGCATCAGCTTCTGCAACCAGA...TGTGGCTGTGGAATAGGCCCAGCAAGCACCTTGCTGAGCACCAGCCACTTCCTG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000089174.6 |
||
| CDS-3UTR GCA 90 bp | GCCTGGTTCTGTTGCTTCCTTATCAAGGGCGGCAGTGGCCTGCAGCCTGCCCTCGAGGACAGAGAAGGCTaGCAGGAACTGAAGAAGGTC | + |
|
Preference number: 4 (lower is better) Translates to: AWFCCFLIKGGSGLQPALEDREG*QELKKV Trigger: GACCTTCTTCAGTTCCTGGCAGCCTTCTCTGTCCTC...GAGGGCAGGCTGCAGGCCACTGCCGCCCTTGATAAGGAAGCAACAGAACCAGGC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000089174.6 ENSMUST00000229411.2 |
||
| CDS-3UTR CCA 90 bp | GCAAGGTGCTTGCTGGGCCTATTCCACAGCCACACAGTTGCTGCCTCTTCTGACTTCAGCTTCTCATCCTaGGGGACCGGCCCGTCTGGA | + |
|
Preference number: 4 (lower is better) Translates to: ARCLLGLFHSHTVAASSDFSFSS*GTGPSG Trigger: TCCAGACGGGCCGGTCCCCCAGGATGAGAAGCTGAA...GTCAGAAGAGGCAGCAACTGTGTGGCTGTGGAATAGGCCCAGCAAGCACCTTGC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000089174.6 |
||
| CDS-3UTR CCA 90 bp | AACTCCTTGCATAGCTTCCTGCTCTGTAGCCTCCTGCTCTGTGGCCACGGGACTCTGAGGATGGGTGAGTaGGGCCCCTGGTCAAAGACG | + |
|
Preference number: 4 (lower is better) Translates to: NSLHSFLLCSLLLCGHGTLRMGE*GPWSKT Trigger: CGTCTTTGACCAGGGGCCCCACTCACCCATCCTCAG...AGTCCCGTGGCCACAGAGCAGGAGGCTACAGAGCAGGAAGCTATGCAAGGAGTT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000089174.6 |
||
| CDS-3UTR TCA 90 bp | GAGAGAGAGAGAGAGAGACCTAAGCCTAGCTCTTGCTTCTCTGCACTGCAGAGCCAGGCTGAGGATGGGTaGGTGGGGCCCCTGGTCAAA | + |
|
Preference number: 4 (lower is better) Translates to: ERERERPKPSSCFSALQSQAEDG*VGPLVK Trigger: TTTGACCAGGGGCCCCACTCACCCATCCTCAGCCTG...GCTCTGCAGTGCAGAGAAGCAAGAGCTAGGCTTAGGTCTCTCTCTCTCTCTCTC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000089174.6 |
||
| 3UTR CAA 72 bp | TTCCCATCAGGAAGTGGCTGGTGCTCAGCAAGGTGCTaGCTGGGCCTATTCCACAGCCACACAGTTGCTGCC | + |
|
Preference number: 4 (lower is better) Translates to: FPSGSGWCSARC*LGLFHSHTVAA Trigger: GGCAGCAACTGTGTGGCTGTGGAATAGGCCCAGCAAGCACCTTGCTGAGCACCAGCCACTTCCTGATGGGAA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000089174.6 ENSMUST00000229384.2 ENSMUST00000229411.2 |
||
| 3UTR CAA 72 bp | TGTGGTGTGCTGCAAGACCCTGGAAGCTCAGTCTTTTaGGCCAGAGCTCAACCCTGGCTTCTGAGGGCGCAG | + |
|
Preference number: 4 (lower is better) Translates to: CGVLQDPGSSVF*ARAQPWLLRAQ Trigger: CTGCGCCCTCAGAAGCCAGGGTTGAGCTCTGGCCAAAAAGACTGAGCTTCCAGGGTCTTGCAGCACACCACA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000089174.6 ENSMUST00000229384.2 ENSMUST00000229411.2 |
||
| 3UTR CAA 72 bp | CCTAGCTGGTCCAGGGCTACAACTCAGACTGGGATCTaGAAATCCTCGGGCCTTTCCGGATCTCCTTCCGCC | + |
|
Preference number: 4 (lower is better) Translates to: PSWSRATTQTGI*KSSGLSGSPSA Trigger: GGCGGAAGGAGATCCGGAAAGGCCCGAGGATTTCAAGATCCCAGTCTGAGTTGTAGCCCTGGACCAGCTAGG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000229384.2 ENSMUST00000229411.2 |
||
| CDS-3UTR TCA 90 bp | TGGAAGCTCAGTCTTTTTGGCCAGAGCTCAACCCTGGCTTCTGAGGGCGCAGCACTCAGACTGGGATCTTaGAATCCTCGGGCCTTTCCG | + |
|
Preference number: 4 (lower is better) Translates to: WKLSLFGQSSTLASEGAALRLGS*NPRAFP Trigger: CGGAAAGGCCCGAGGATTTCAAGATCCCAGTCTGAG...TGCTGCGCCCTCAGAAGCCAGGGTTGAGCTCTGGCCAAAAAGACTGAGCTTCCA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000089174.6 |
||
| CDS-3UTR CCA 90 bp | CTGCACTGCAGAGCCAGGGACTCCCTCTTTCCGAGGCAGAAACGTTCTCCAGGCATCTTGTACTGCTGGTaGATGTCATTCAGCTGCGCC | + |
|
Preference number: 4 (lower is better) Translates to: LHCRARDSLFPRQKRSPGILYCW*MSFSCA Trigger: GGCGCAGCTGAATGACATCCACCAGCAGTACAAGAT...GCCTGGAGAACGTTTCTGCCTCGGAAAGAGGGAGTCCCTGGCTCTGCAGTGCAG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000089174.6 ENSMUST00000229411.2 |
||
| CDS-3UTR GCA 90 bp | AGGCTGTGTTCTCCACCACGTGCGAGAAAGATGGAACCCAGGATCGCCGTGAACGAGGACAGAGAAGGCTaGCAGGAACTGAAGAAGGTC | + |
|
Preference number: 4 (lower is better) Translates to: RLCSPPRARKMEPRIAVNEDREG*QELKKV Trigger: GACCTTCTTCAGTTCCTGGCAGCCTTCTCTGTCCTC...GTTCACGGCGATCCTGGGTTCCATCTTTCTCGCACGTGGTGGAGAACACAGCCT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000229384.2 |
||
| CDS-3UTR GCA 90 bp | GCAAGGTGCTTGCTGGGCCTATTCCACAGCCACACAGTTGCTGCCTCTTCTGACTGGATGTCATTCAGCTaGGCCAGGTTCTTCAGTGCC | + |
|
Preference number: 4 (lower is better) Translates to: ARCLLGLFHSHTVAASSDWMSFS*ARFFSA Trigger: GGCACTGAAGAACCTGGCGCAGCTGAATGACATCCA...GTCAGAAGAGGCAGCAACTGTGTGGCTGTGGAATAGGCCCAGCAAGCACCTTGC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000089174.6 ENSMUST00000229411.2 |
||
| CDS-3UTR GCA 90 bp | ATCTGCAGCAGTTCCTGCTGCCCCTTACATTCTCCTCACCAGCCTGGGGGAGGCTCCAGGATCTTGTACTaGTGGTGGATGTCATTCAGC | + |
|
Preference number: 4 (lower is better) Translates to: ICSSSCCPLHSPHQPGGGSRILY*WWMSFS Trigger: GCTGAATGACATCCACCAGCAGTACAAGATCCTGGA...GCCTCCCCCAGGCTGGTGAGGAGAATGTAAGGGGCAGCAGGAACTGCTGCAGAT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000089174.6 ENSMUST00000229411.2 |
||
| CDS-3UTR GCA 90 bp | CCCTGGAAGCTCAGTCTTTTTGGCCAGAGCTCAACCCTGGCTTCTGAGGGCGCATCCAGGATCTTGTACTaGTGGTGGATGTCATTCAGC | + |
|
Preference number: 4 (lower is better) Translates to: PWKLSLFGQSSTLASEGASRILY*WWMSFS Trigger: GCTGAATGACATCCACCAGCAGTACAAGATCCTGGA...TGCGCCCTCAGAAGCCAGGGTTGAGCTCTGGCCAAAAAGACTGAGCTTCCAGGG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000089174.6 ENSMUST00000229411.2 |
||
| CDS-3UTR CCA 90 bp | ACATCTGCAGCAGTTCCTGCTGCCCCTTACATTCTCCTCACCAGCCTGGGGGAGAGGATCTTGTACTGCTaGTGGATGTCATTCAGCTGC | + |
|
Preference number: 4 (lower is better) Translates to: TSAAVPAAPYILLTSLGERILYC*WMSFSC Trigger: GCAGCTGAATGACATCCACCAGCAGTACAAGATCCT...CTCCCCCAGGCTGGTGAGGAGAATGTAAGGGGCAGCAGGAACTGCTGCAGATGT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000089174.6 ENSMUST00000229411.2 |
||
| 3UTR CAA 72 bp | ATAGCACCTTCACTTGTAACTCAGAGCCTGGTTCTGTaGCTTCCTTATCAAGGGCGGCAGTGGCCTGCAGCC | + |
|
Preference number: 4 (lower is better) Translates to: IAPSLVTQSLVL*LPYQGRQWPAA Trigger: GGCTGCAGGCCACTGCCGCCCTTGATAAGGAAGCAACAGAACCAGGCTCTGAGTTACAAGTGAAGGTGCTAT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000089174.6 ENSMUST00000229411.2 |
||
| CDS-3UTR TCA 90 bp | GAAGCTGATGCCCCAGCGGATCAGGAGGTTCCAGTTGGAATTATGGTCAAAGTAGAGTCCTCCAGCACCTaGAGGAACCCCATCTTGGCT | + |
|
Preference number: 4 (lower is better) Translates to: EADAPADQEVPVGIMVKVESSST*RNPILA Trigger: AGCCAAGATGGGGTTCCTTCAGGTGCTGGAGGACTC...TACTTTGACCATAATTCCAACTGGAACCTCCTGATCCGCTGGGGCATCAGCTTC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000229597.2 |
||
| CDS-3UTR CCA 90 bp | ACAACTCAGACTGGGATCTTGAAATCCTCGGGCCTTTCCGGATCTCCTTCCGCCATCTTGTACTGCTGGTaGATGTCATTCAGCTGCGCC | + |
|
Preference number: 4 (lower is better) Translates to: TTQTGILKSSGLSGSPSAILYCW*MSFSCA Trigger: GGCGCAGCTGAATGACATCCACCAGCAGTACAAGAT...GGCGGAAGGAGATCCGGAAAGGCCCGAGGATTTCAAGATCCCAGTCTGAGTTGT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000229411.2 |
||
| CDS-3UTR CCA 90 bp | TTCCGAGGCAGAAACGTTCTCCAGGCTGGTCCTGACATCTGCAGCAGTTCCTGCAGGATCTTGTACTGCTaGTGGATGTCATTCAGCTGC | + |
|
Preference number: 4 (lower is better) Translates to: FRGRNVLQAGPDICSSSCRILYC*WMSFSC Trigger: GCAGCTGAATGACATCCACCAGCAGTACAAGATCCT...GCAGGAACTGCTGCAGATGTCAGGACCAGCCTGGAGAACGTTTCTGCCTCGGAA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000089174.6 ENSMUST00000229411.2 |
||
| CDS-3UTR CCA 90 bp | GAAACCAGGCTGCCTTCTGAAGGCCTAACTCCTTGCATAGCTTCCTGCTCTGTAGTGGTGGACAATCTTTaGGAAGCGCAGCACGACGTC | + |
|
Preference number: 4 (lower is better) Translates to: ETRLPSEGLTPCIASCSVVVDNL*EAQHDV Trigger: GACGTCGTGCTGCGCTTCCCAAAGATTGTCCACCAC...TACAGAGCAGGAAGCTATGCAAGGAGTTAGGCCTTCAGAAGGCAGCCTGGTTTC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000089174.6 ENSMUST00000229411.2 |
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| CDS-3UTR CCA 90 bp | GAGAGAGAGAGAGAGAGACCTAAGCCTAGCTCTTGCTTCTCTGCACTGCAGAGCTCAAAGACGCCTGTCTaGTTGCAGAAGCTGATGCCC | + |
|
Preference number: 4 (lower is better) Translates to: ERERERPKPSSCFSALQSSKTPV*LQKLMP Trigger: GGGCATCAGCTTCTGCAACCAGACAGGCGTCTTTGA...GCTCTGCAGTGCAGAGAAGCAAGAGCTAGGCTTAGGTCTCTCTCTCTCTCTCTC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000089174.6 |
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| CDS-3UTR CCA 90 bp | GCTTTTAGTACTGTTCTGCAGAGAGCTGGACCAGTGACAGGCAGCCCAGGAACATCCCTCAAAGCCTTCTaGAAAGGGTCGGTGCTAGGA | + |
|
Preference number: 4 (lower is better) Translates to: AFSTVLQRAGPVTGSPGTSLKAF*KGSVLG Trigger: TCCTAGCACCGACCCTTTCCAGAAGGCTTTGAGGGA...TGTTCCTGGGCTGCCTGTCACTGGTCCAGCTCTCTGCAGAACAGTACTAAAAGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000089174.6 |
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| 3UTR CAA 72 bp | ACATTCTCCTCACCAGCCTGGGGGAGGCCAGTGGATTaGCTAGCTTTTAGTACTGTTCTGCAGAGAGCTGGA | + |
|
Preference number: 4 (lower is better) Translates to: TFSSPAWGRPVD*LAFSTVLQRAG Trigger: TCCAGCTCTCTGCAGAACAGTACTAAAAGCTAGCAAATCCACTGGCCTCCCCCAGGCTGGTGAGGAGAATGT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000089174.6 ENSMUST00000229411.2 |
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| CDS-3UTR GCA 90 bp | CTCCTCCTTCTTGCGGCGTTTTTCTTCTTCCCTCAAAGCCTTCTGGAAAGGGTCGAGGACAGAGAAGGCTaGCAGGAACTGAAGAAGGTC | + |
|
Preference number: 4 (lower is better) Translates to: LLLLAAFFFFPQSLLERVEDREG*QELKKV Trigger: GACCTTCTTCAGTTCCTGGCAGCCTTCTCTGTCCTC...GACCCTTTCCAGAAGGCTTTGAGGGAAGAAGAAAAACGCCGCAAGAAGGAGGAG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000229384.2 ENSMUST00000229411.2 ENSMUST00000229597.2 |
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| CDS-3UTR GCA 90 bp | CTCCTCCTTCTTGCGGCGTTTTTCTTCTTCCCTCAAAGCCTTCTGGAAAGGGTCTGGATGTCATTCAGCTaGGCCAGGTTCTTCAGTGCC | + |
|
Preference number: 4 (lower is better) Translates to: LLLLAAFFFFPQSLLERVWMSFS*ARFFSA Trigger: GGCACTGAAGAACCTGGCGCAGCTGAATGACATCCA...GACCCTTTCCAGAAGGCTTTGAGGGAAGAAGAAAAACGCCGCAAGAAGGAGGAG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000229411.2 ENSMUST00000229597.2 |
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| CDS-3UTR GCA 90 bp | CTAGTCAATCCAGCTACAGTATCCCATCACAAAGCACAGCCTCCTGCAACCTGTGAGGACAGAGAAGGCTaGCAGGAACTGAAGAAGGTC | + |
|
Preference number: 4 (lower is better) Translates to: LVNPATVSHHKAQPPATCEDREG*QELKKV Trigger: GACCTTCTTCAGTTCCTGGCAGCCTTCTCTGTCCTC...ACAGGTTGCAGGAGGCTGTGCTTTGTGATGGGATACTGTAGCTGGATTGACTAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000089174.6 ENSMUST00000229411.2 |
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| CDS-3UTR CCA 90 bp | AGCCAGGGACTCCCTCTTTCCGAGGCAGAAACGTTCTCCAGGCTGGTCCTGACATCAGGAGGTTCCAGTTaGAATTATGGTCAAAGTAGT | + |
|
Preference number: 4 (lower is better) Translates to: SQGLPLSEAETFSRLVLTSGGSS*NYGQSS Trigger: ACTACTTTGACCATAATTCCAACTGGAACCTCCTGA...TGTCAGGACCAGCCTGGAGAACGTTTCTGCCTCGGAAAGAGGGAGTCCCTGGCT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000089174.6 ENSMUST00000229411.2 |
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| CDS-3UTR CCA 90 bp | TGGCTGGTGCTCAGCAAGGTGCTTGCTGGGCCTATTCCACAGCCACACAGTTGCTCAGGAGGTTCCAGTTaGAATTATGGTCAAAGTAGT | + |
|
Preference number: 4 (lower is better) Translates to: WLVLSKVLAGPIPQPHSCSGGSS*NYGQSS Trigger: ACTACTTTGACCATAATTCCAACTGGAACCTCCTGA...GCAACTGTGTGGCTGTGGAATAGGCCCAGCAAGCACCTTGCTGAGCACCAGCCA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000089174.6 ENSMUST00000229411.2 |
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| CDS-3UTR GCA 90 bp | CCAGTTGGAATTATGGTCAAAGTAGTGGTGGACAATCTTTGGGAAGCGCAGCACTGGATGTCATTCAGCTaGGCCAGGTTCTTCAGTGCC | + |
|
Preference number: 4 (lower is better) Translates to: PVGIMVKVVVDNLWEAQHWMSFS*ARFFSA Trigger: GGCACTGAAGAACCTGGCGCAGCTGAATGACATCCA...GTGCTGCGCTTCCCAAAGATTGTCCACCACTACTTTGACCATAATTCCAACTGG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000229597.2 |
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| CDS-3UTR CCA 90 bp | TGGAAGCTCAGTCTTTTTGGCCAGAGCTCAACCCTGGCTTCTGAGGGCGCAGCAGGAATAAACTCTGTCTaGTCTGTTTTAAACGGGTTC | + |
|
Preference number: 4 (lower is better) Translates to: WKLSLFGQSSTLASEGAAGINSV*SVLNGF Trigger: GAACCCGTTTAAAACAGACCAGACAGAGTTTATTCC...TGCTGCGCCCTCAGAAGCCAGGGTTGAGCTCTGGCCAAAAAGACTGAGCTTCCA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000089174.6 |
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| CDS-3UTR CCA 90 bp | TGGTCTGTTTTAAACGGGTTCCGGAAGTCAGAATCTTTCTCAGTGATCCCCAGCATCTTGTACTGCTGGTaGATGTCATTCAGCTGCGCC | + |
|
Preference number: 4 (lower is better) Translates to: WSVLNGFRKSESFSVIPSILYCW*MSFSCA Trigger: GGCGCAGCTGAATGACATCCACCAGCAGTACAAGAT...GCTGGGGATCACTGAGAAAGATTCTGACTTCCGGAACCCGTTTAAAACAGACCA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000229411.2 ENSMUST00000229597.2 |
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| CDS-3UTR CCA 90 bp | CCCAGCGGATCAGGAGGTTCCAGTTGGAATTATGGTCAAAGTAGTGGTGGACAACCCATCTTGGCTAAGTaGCTTGAAGAGTCCCTTAAG | + |
|
Preference number: 4 (lower is better) Translates to: PSGSGGSSWNYGQSSGGQPILAK*LEESLK Trigger: CTTAAGGGACTCTTCAAGCCACTTAGCCAAGATGGG...TTGTCCACCACTACTTTGACCATAATTCCAACTGGAACCTCCTGATCCGCTGGG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000229597.2 |
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| 3UTR CAA 72 bp | GGGCTGGGGTGTCTCCACTCCTATAAGCGATACATTTaGGCTTGGCAAGATCAAAGAGGTGGAGCTGTAATT | + |
|
Preference number: 4 (lower is better) Translates to: GLGCLHSYKRYI*AWQDQRGGAVI Trigger: AATTACAGCTCCACCTCTTTGATCTTGCCAAGCCAAAATGTATCGCTTATAGGAGTGGAGACACCCCAGCCC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000089174.6 ENSMUST00000229411.2 |
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| CDS-3UTR GCA 90 bp | AGGGTCGGTGCTAGGAATAAACTCTGTCTGGTCTGTTTTAAACGGGTTCCGGAATCCAGGATCTTGTACTaGTGGTGGATGTCATTCAGC | + |
|
Preference number: 4 (lower is better) Translates to: RVGARNKLCLVCFKRVPESRILY*WWMSFS Trigger: GCTGAATGACATCCACCAGCAGTACAAGATCCTGGA...TTCCGGAACCCGTTTAAAACAGACCAGACAGAGTTTATTCCTAGCACCGACCCT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000229411.2 ENSMUST00000229597.2 |
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| CDS-3UTR CCA 90 bp | GAGCTTGTCAGAGGATTCAGACACCATCAAATTTATTTTACCAATGAAGGCACAGTGATCCCCAGCTCCTaGGCCATCAGGCTGAGGATG | + |
|
Preference number: 4 (lower is better) Translates to: ELVRGFRHHQIYFTNEGTVIPSS*AIRLRM Trigger: CATCCTCAGCCTGATGGCCCAGGAGCTGGGGATCAC...TGTGCCTTCATTGGTAAAATAAATTTGATGGTGTCTGAATCCTCTGACAAGCTC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000089174.6 |
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| CDS-3UTR GCA 90 bp | GATTCAGACACCATCAAATTTATTTTACCAATGAAGGCACAGCACAGGGAAGAGTTCAGTGCCAACAGCTaGTCTCGCCGCTTCACCTCA | + |
|
Preference number: 4 (lower is better) Translates to: DSDTIKFILPMKAQHREEFSANS*SRRFTS Trigger: TGAGGTGAAGCGGCGAGAGCAGCTGTTGGCACTGAA...CTCTTCCCTGTGCTGTGCCTTCATTGGTAAAATAAATTTGATGGTGTCTGAATC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000089174.6 ENSMUST00000229411.2 |
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| CDS CCA 90 bp | CGAGAAAGCATCCTTCAGCTTCTCATCCTGGGGGACCGGCCCGTCTaGAAGCACATCGGCAGCAATGAGCACTGTGCGGGAGTCCTCCAG | + |
|
Preference number: 5 (lower is better) Translates to: RESILQLLILGDRPV*KHIGSNEHCAGVLQ Trigger: CTGGAGGACTCCCGCACAGTGCTCATTGCTGCCGATGTGCTTCCAGACGGGCCGGTCCCCCAGGATGAGAAGCTGAAGGATGCTTTCTCG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000089174.6 |
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| CDS-3UTR CAA 90 bp | CCCTGGAAGCTCAGTCTTTTTGGCCAGAGCTCAACCCTGGCTTCTGAGGGCGCAAGTGGTGGACAATCTTaGGGAAGCGCAGCACGACGT | + |
|
Preference number: 5 (lower is better) Translates to: PWKLSLFGQSSTLASEGASGGQS*GSAARR Trigger: ACGTCGTGCTGCGCTTCCCAAAGATTGTCCACCACT...TGCGCCCTCAGAAGCCAGGGTTGAGCTCTGGCCAAAAAGACTGAGCTTCCAGGG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000089174.6 ENSMUST00000229411.2 |
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| CDS TCA 90 bp | AGCACATCGGCAGCAATGAGCACTGTGCGGGAGTCCTCCAGCACCTaGAGGAACCCCATCTTGGCTAAGTGGCTTGAAGAGTCCCTTAAG | + |
|
Preference number: 5 (lower is better) Translates to: STSAAMSTVRESSST*RNPILAKWLEESLK Trigger: CTTAAGGGACTCTTCAAGCCACTTAGCCAAGATGGGGTTCCTTCAGGTGCTGGAGGACTCCCGCACAGTGCTCATTGCTGCCGATGTGCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000229597.2 |
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| CDS GCA 90 bp | AGCATGACATCCAGGATCTTGTACTGCTGGTGGATGTCATTCAGCTaGGCCAGGTTCTTCAGTGCCAACAGCTGCTCTCGCCGCTTCACC | + |
|
Preference number: 5 (lower is better) Translates to: SMTSRILYCWWMSFS*ARFFSANSCSRRFT Trigger: GGTGAAGCGGCGAGAGCAGCTGTTGGCACTGAAGAACCTGGCGCAGCTGAATGACATCCACCAGCAGTACAAGATCCTGGATGTCATGCT 56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000089174.6 ENSMUST00000229411.2 ENSMUST00000229597.2 |
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| CDS-3UTR CAA 90 bp | AGTCTTTTTGGCCAGAGCTCAACCCTGGCTTCTGAGGGCGCAGCAAACAGTTCCGAGTCCTCCAGCACCTaGAAGAGTCCCTTAAGCATG | + |
|
Preference number: 5 (lower is better) Translates to: SLFGQSSTLASEGAANSSESSST*KSPLSM Trigger: CATGCTTAAGGGACTCTTCAAGGTGCTGGAGGACTC...GGAACTGTTTGCTGCGCCCTCAGAAGCCAGGGTTGAGCTCTGGCCAAAAAGACT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000089174.6 |
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| CDS-3UTR CAA 90 bp | GCAAGGTGCTTGCTGGGCCTATTCCACAGCCACACAGTTGCTGCCTCTTCTGACCACGTGCGAGAAAGCTaGAAGAGTCCCTTAAGCATG | + |
|
Preference number: 5 (lower is better) Translates to: ARCLLGLFHSHTVAASSDHVRES*KSPLSM Trigger: CATGCTTAAGGGACTCTTCAAGCTTTCTCGCACGTG...GTCAGAAGAGGCAGCAACTGTGTGGCTGTGGAATAGGCCCAGCAAGCACCTTGC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000229411.2 |
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| CDS CCA 90 bp | GGCTTGAAGAGTCCCTTAAGCATGACATCCAGGATCTTGTACTGCTaGTGGATGTCATTCAGCTGCGCCAGGTTCTTCAGTGCCAACAGC | + |
|
Preference number: 5 (lower is better) Translates to: GLKSPLSMTSRILYC*WMSFSCARFFSANS Trigger: GCTGTTGGCACTGAAGAACCTGGCGCAGCTGAATGACATCCACCAGCAGTACAAGATCCTGGATGTCATGCTTAAGGGACTCTTCAAGCC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000229597.2 |
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| CDS-3UTR CAA 90 bp | AAGCTCAGTCTTTTTGGCCAGAGCTCAACCCTGGCTTCTGAGGGCGCAGCAAACATGACATCCAGGATCTaGTACTGCTGGTGGATGTCA | + |
|
Preference number: 5 (lower is better) Translates to: KLSLFGQSSTLASEGAANMTSRI*YCWWMS Trigger: TGACATCCACCAGCAGTACAAGATCCTGGATGTCAT...GTTTGCTGCGCCCTCAGAAGCCAGGGTTGAGCTCTGGCCAAAAAGACTGAGCTT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000089174.6 ENSMUST00000229411.2 |
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| CDS-3UTR CAA 90 bp | ACTCAGACTGGGATCTTGAAATCCTCGGGCCTTTCCGGATCTCCTTCCGCCTCTATGACATCCAGGATCTaGTACTGCTGGTGGATGTCA | + |
|
Preference number: 5 (lower is better) Translates to: TQTGILKSSGLSGSPSASMTSRI*YCWWMS Trigger: TGACATCCACCAGCAGTACAAGATCCTGGATGTCAT...AGAGGCGGAAGGAGATCCGGAAAGGCCCGAGGATTTCAAGATCCCAGTCTGAGT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000229411.2 |
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| CDS-3UTR CAA 90 bp | GGGAAGAGAAAGAACAGGACAGGTCAGGCTAAGACTCAGGTCTCAATTGAGCACCGCCTCTCCTCCTTCTaGCGGCGTTTTTCTTCTTCC | + |
|
Preference number: 5 (lower is better) Translates to: GKRKNRTGQAKTQVSIEHRLSSF*RRFSSS Trigger: GGAAGAAGAAAAACGCCGCAAGAAGGAGGAGAGGCG...GTGCTCAATTGAGACCTGAGTCTTAGCCTGACCTGTCCTGTTCTTTCTCTTCCC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000089174.6 |
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| CDS-3UTR CAA 90 bp | GAGCCACTGTCTAGTCAATCCAGCTACAGTATCCCATCACAAAGCACAGCCTCCACTCAGACTGGGATCTaGAAATCCTCGGGCCTTTCC | + |
|
Preference number: 5 (lower is better) Translates to: EPLSSQSSYSIPSQSTASTQTGI*KSSGLS Trigger: GGAAAGGCCCGAGGATTTCAAGATCCCAGTCTGAGT...GGAGGCTGTGCTTTGTGATGGGATACTGTAGCTGGATTGACTAGACAGTGGCTC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000089174.6 |
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| CDS-3UTR CAA 90 bp | ATTATGGTCAAAGTAGTGGTGGACAATCTTTGGGAAGCGCAGCACGACGTCACCCCACAACCAGAAATCTaGAGGCTCGGGTCCAGAGTG | + |
|
Preference number: 5 (lower is better) Translates to: IMVKVVVDNLWEAQHDVTPQPEI*RLGSRV Trigger: CACTCTGGACCCGAGCCTCAAGATTTCTGGTTGTGG...GGTGACGTCGTGCTGCGCTTCCCAAAGATTGTCCACCACTACTTTGACCATAAT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000229384.2 |
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| CDS GCA 90 bp | AGCACCTTGAAGAGTCCCTTAAGCATGACATCCAGGATCTTGTACTaGTGGTGGATGTCATTCAGCTGCGCCAGGTTCTTCAGTGCCAAC | + |
|
Preference number: 5 (lower is better) Translates to: STLKSPLSMTSRILY*WWMSFSCARFFSAN Trigger: GTTGGCACTGAAGAACCTGGCGCAGCTGAATGACATCCACCAGCAGTACAAGATCCTGGATGTCATGCTTAAGGGACTCTTCAAGGTGCT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000089174.6 |
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| CDS GCA 90 bp | AGTGGCTTGAAGAGTCCCTTAAGCATGACATCCAGGATCTTGTACTaGTGGTGGATGTCATTCAGCTGCGCCAGGTTCTTCAGTGCCAAC | + |
|
Preference number: 5 (lower is better) Translates to: SGLKSPLSMTSRILY*WWMSFSCARFFSAN Trigger: GTTGGCACTGAAGAACCTGGCGCAGCTGAATGACATCCACCAGCAGTACAAGATCCTGGATGTCATGCTTAAGGGACTCTTCAAGCCACT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000229597.2 |
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| CDS CCA 90 bp | TTGAAGAGTCCCTTAAGCATGACATCCAGGATCTTGTACTGCTGGTaGATGTCATTCAGCTGCGCCAGGTTCTTCAGTGCCAACAGCTGC | + |
|
Preference number: 5 (lower is better) Translates to: LKSPLSMTSRILYCW*MSFSCARFFSANSC Trigger: GCAGCTGTTGGCACTGAAGAACCTGGCGCAGCTGAATGACATCCACCAGCAGTACAAGATCCTGGATGTCATGCTTAAGGGACTCTTCAA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000089174.6 ENSMUST00000229411.2 ENSMUST00000229597.2 |
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| CDS CCA 90 bp | ACCTTGAAGAGTCCCTTAAGCATGACATCCAGGATCTTGTACTGCTaGTGGATGTCATTCAGCTGCGCCAGGTTCTTCAGTGCCAACAGC | + |
|
Preference number: 5 (lower is better) Translates to: TLKSPLSMTSRILYC*WMSFSCARFFSANS Trigger: GCTGTTGGCACTGAAGAACCTGGCGCAGCTGAATGACATCCACCAGCAGTACAAGATCCTGGATGTCATGCTTAAGGGACTCTTCAAGGT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000089174.6 |
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| CDS CCA 90 bp | AGCTTGAAGAGTCCCTTAAGCATGACATCCAGGATCTTGTACTGCTaGTGGATGTCATTCAGCTGCGCCAGGTTCTTCAGTGCCAACAGC | + |
|
Preference number: 5 (lower is better) Translates to: SLKSPLSMTSRILYC*WMSFSCARFFSANS Trigger: GCTGTTGGCACTGAAGAACCTGGCGCAGCTGAATGACATCCACCAGCAGTACAAGATCCTGGATGTCATGCTTAAGGGACTCTTCAAGCT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000229411.2 |
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| CDS GCA 90 bp | GAAAGCTTGAAGAGTCCCTTAAGCATGACATCCAGGATCTTGTACTaGTGGTGGATGTCATTCAGCTGCGCCAGGTTCTTCAGTGCCAAC | + |
|
Preference number: 5 (lower is better) Translates to: ESLKSPLSMTSRILY*WWMSFSCARFFSAN Trigger: GTTGGCACTGAAGAACCTGGCGCAGCTGAATGACATCCACCAGCAGTACAAGATCCTGGATGTCATGCTTAAGGGACTCTTCAAGCTTTC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000229411.2 |
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| CDS-3UTR CAA 90 bp | AATTATGGTCAAAGTAGTGGTGGACAATCTTTGGGAAGCGCAGCACGACGTCACATGACATCCAGGATCTaGTACTGCTGGTGGATGTCA | + |
|
Preference number: 5 (lower is better) Translates to: NYGQSSGGQSLGSAARRHMTSRI*YCWWMS Trigger: TGACATCCACCAGCAGTACAAGATCCTGGATGTCAT...GTGACGTCGTGCTGCGCTTCCCAAAGATTGTCCACCACTACTTTGACCATAATT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000229597.2 |
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| CDS-3UTR CAA 90 bp | GGATCAGGAGGTTCCAGTTGGAATTATGGTCAAAGTAGTGGTGGACAATCTTTGTCTTGGCTAAGTGGCTaGAAGAGTCCCTTAAGCATG | + |
|
Preference number: 5 (lower is better) Translates to: GSGGSSWNYGQSSGGQSLSWLSG*KSPLSM Trigger: CATGCTTAAGGGACTCTTCAAGCCACTTAGCCAAGA...CAAAGATTGTCCACCACTACTTTGACCATAATTCCAACTGGAACCTCCTGATCC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000229597.2 |
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| CDS TCA 72 bp | GGGGGACCGGCCCGTCTGGAAGCACATCGGCAGCAATaGGCACTGTGCGGGAGTCCTCCAGCACCTGAAGGA | + |
|
Preference number: 6 (lower is better) Translates to: GGPARLEAHRQQ*ALCGSPPAPEG Trigger: TCCTTCAGGTGCTGGAGGACTCCCGCACAGTGCTCATTGCTGCCGATGTGCTTCCAGACGGGCCGGTCCCCC 65% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000229597.2 |
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| CDS CCA 72 bp | ATCCTTCAGCTTCTCATCCTGGGGGACCGGCCCGTCTaGAAGCACATCGGCAGCAATGAGCACTGTGCGGGA | + |
|
Preference number: 6 (lower is better) Translates to: ILQLLILGDRPV*KHIGSNEHCAG Trigger: TCCCGCACAGTGCTCATTGCTGCCGATGTGCTTCCAGACGGGCCGGTCCCCCAGGATGAGAAGCTGAAGGAT 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000089174.6 |
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| CDS CCA 72 bp | ACCACGTGCGAGAAAGCATCCTTCAGCTTCTCATCCTaGGGGACCGGCCCGTCTGGAAGCACATCGGCAGCA | + |
|
Preference number: 6 (lower is better) Translates to: TTCEKASFSFSS*GTGPSGSTSAA Trigger: TGCTGCCGATGTGCTTCCAGACGGGCCGGTCCCCCAGGATGAGAAGCTGAAGGATGCTTTCTCGCACGTGGT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000089174.6 |
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| CDS TCA 72 bp | GCAGCAATGAGCACTGTGCGGGAGTCCTCCAGCACCTaGAGGAACCCCATCTTGGCTAAGTGGCTTGAAGAG | + |
|
Preference number: 6 (lower is better) Translates to: AAMSTVRESSST*RNPILAKWLEE Trigger: CTCTTCAAGCCACTTAGCCAAGATGGGGTTCCTTCAGGTGCTGGAGGACTCCCGCACAGTGCTCATTGCTGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000229597.2 |
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| CDS GCA 72 bp | TCCAGGATCTTGTACTGCTGGTGGATGTCATTCAGCTaGGCCAGGTTCTTCAGTGCCAACAGCTGCTCTCGC | + |
|
Preference number: 6 (lower is better) Translates to: SRILYCWWMSFS*ARFFSANSCSR Trigger: GCGAGAGCAGCTGTTGGCACTGAAGAACCTGGCGCAGCTGAATGACATCCACCAGCAGTACAAGATCCTGGA 56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000089174.6 ENSMUST00000229411.2 ENSMUST00000229597.2 |
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| CDS CCA 72 bp | CCCTTAAGCATGACATCCAGGATCTTGTACTGCTGGTaGATGTCATTCAGCTGCGCCAGGTTCTTCAGTGCC | + |
|
Preference number: 6 (lower is better) Translates to: PLSMTSRILYCW*MSFSCARFFSA Trigger: GGCACTGAAGAACCTGGCGCAGCTGAATGACATCCACCAGCAGTACAAGATCCTGGATGTCATGCTTAAGGG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000089174.6 ENSMUST00000229411.2 ENSMUST00000229597.2 |
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| CDS CAA 90 bp | TCCTCCAGCACCTTGAAGAGTCCCTTAAGCATGACATCCAGGATCTaGTACTGCTGGTGGATGTCATTCAGCTGCGCCAGGTTCTTCAGT | + |
|
Preference number: 6 (lower is better) Translates to: SSSTLKSPLSMTSRI*YCWWMSFSCARFFS Trigger: ACTGAAGAACCTGGCGCAGCTGAATGACATCCACCAGCAGTACAAGATCCTGGATGTCATGCTTAAGGGACTCTTCAAGGTGCTGGAGGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000089174.6 |
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| CDS CAA 90 bp | TGGCTAAGTGGCTTGAAGAGTCCCTTAAGCATGACATCCAGGATCTaGTACTGCTGGTGGATGTCATTCAGCTGCGCCAGGTTCTTCAGT | + |
|
Preference number: 6 (lower is better) Translates to: WLSGLKSPLSMTSRI*YCWWMSFSCARFFS Trigger: ACTGAAGAACCTGGCGCAGCTGAATGACATCCACCAGCAGTACAAGATCCTGGATGTCATGCTTAAGGGACTCTTCAAGCCACTTAGCCA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000229597.2 |
||
| CDS CAA 90 bp | GTGCGAGAAAGCTTGAAGAGTCCCTTAAGCATGACATCCAGGATCTaGTACTGCTGGTGGATGTCATTCAGCTGCGCCAGGTTCTTCAGT | + |
|
Preference number: 6 (lower is better) Translates to: VRESLKSPLSMTSRI*YCWWMSFSCARFFS Trigger: ACTGAAGAACCTGGCGCAGCTGAATGACATCCACCAGCAGTACAAGATCCTGGATGTCATGCTTAAGGGACTCTTCAAGCTTTCTCGCAC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000229411.2 |
||
| CDS GCA 72 bp | AAGAGTCCCTTAAGCATGACATCCAGGATCTTGTACTaGTGGTGGATGTCATTCAGCTGCGCCAGGTTCTTC | + |
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Preference number: 6 (lower is better) Translates to: KSPLSMTSRILY*WWMSFSCARFF Trigger: GAAGAACCTGGCGCAGCTGAATGACATCCACCAGCAGTACAAGATCCTGGATGTCATGCTTAAGGGACTCTT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000089174.6 ENSMUST00000229411.2 ENSMUST00000229597.2 |
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| CDS CCA 72 bp | AGTCCCTTAAGCATGACATCCAGGATCTTGTACTGCTaGTGGATGTCATTCAGCTGCGCCAGGTTCTTCAGT | + |
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Preference number: 6 (lower is better) Translates to: SPLSMTSRILYC*WMSFSCARFFS Trigger: ACTGAAGAACCTGGCGCAGCTGAATGACATCCACCAGCAGTACAAGATCCTGGATGTCATGCTTAAGGGACT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000089174.6 ENSMUST00000229411.2 ENSMUST00000229597.2 |
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