Pregenerated sensors for CCDC130 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000004994Ensembl transcript IDs: ENSMUST00000005120.12, ENSMUST00000098578.10, ENSMUST00000172320.2
Found 166 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | TCTCTGAGTCAGAGTAGTCAGCCACCAGGGAGGCATTGGGGGTGTTaGGGTTCAGCAGGTCCTCCTGGGAGGAACCTAGGGGGAAGGCCT | + |
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Preference number: 1 (lower is better) Translates to: SLSQSSQPPGRHWGC*GSAGPPGRNLGGRP Trigger: AGGCCTTCCCCCTAGGTTCCTCCCAGGAGGACCTGCTGAACCCCAACACCCCCAATGCCTCCCTGGTGGCTGACTACTCTGACTCAGAGA 61% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000005120.12 |
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| 3UTR CCA 90 bp | CTTACTCGCTCTCTGAGTCAGAGTAGTCAGCCACCAGGGAGGCATTaGGGGTGTTGGGGTTCAGCAGGTCCTCCTGGGAGGAACCTAGGG | + |
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Preference number: 1 (lower is better) Translates to: LTRSLSQSSQPPGRH*GCWGSAGPPGRNLG Trigger: CCCTAGGTTCCTCCCAGGAGGACCTGCTGAACCCCAACACCCCCAATGCCTCCCTGGTGGCTGACTACTCTGACTCAGAGAGCGAGTAAG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000005120.12 |
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| 3UTR CCA 90 bp | TTCAGAGCGAAGTCATCCTTCCAGGCATTCTGCGCTTCCTGGATGTaGCTGAGTGTGGGGAGGGCCTTCTTCAGTGTGCTGCGGTCAGCC | + |
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Preference number: 1 (lower is better) Translates to: FRAKSSFQAFCASWM*LSVGRAFFSVLRSA Trigger: GGCTGACCGCAGCACACTGAAGAAGGCCCTCCCCACACTCAGCCACATCCAGGAAGCGCAGAATGCCTGGAAGGATGACTTCGCTCTGAA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000172320.2 |
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| 3UTR GCA 90 bp | AGTGTGGGGAGGGCCTTCTTCAGTGTGCTGCGGTCAGCCTCACCATaGTCTAGGCGGAACATGGCATCCGTCTCCAGCTTCTCTTTCTTC | + |
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Preference number: 1 (lower is better) Translates to: SVGRAFFSVLRSASP*SRRNMASVSSFSFF Trigger: GAAGAAAGAGAAGCTGGAGACGGATGCCATGTTCCGCCTAGAGCATGGTGAGGCTGACCGCAGCACACTGAAGAAGGCCCTCCCCACACT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000172320.2 |
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| 3UTR TCA 90 bp | GTCATGGCTTCTGGTCCTGGAATTCTGACTCCCTTACTCGCTCTCTaGGTCAGAGTAGTCAGCCACCAGGGAGGCATTGGGGGTGTTGGG | + |
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Preference number: 1 (lower is better) Translates to: VMASGPGILTPLLAL*VRVVSHQGGIGGVG Trigger: CCCAACACCCCCAATGCCTCCCTGGTGGCTGACTACTCTGACTCAGAGAGCGAGTAAGGGAGTCAGAATTCCAGGACCAGAAGCCATGAC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000005120.12 |
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| 3UTR CCA 90 bp | ATGCTATTCAGAGCGAAGTCATCCTTCCAGGCATTCTGCGCTTCCTaGATGTGGCTGAGTGTGGGGAGGGCCTTCTTCAGTGTGCTGCGG | + |
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Preference number: 1 (lower is better) Translates to: MLFRAKSSFQAFCAS*MWLSVGRAFFSVLR Trigger: CCGCAGCACACTGAAGAAGGCCCTCCCCACACTCAGCCACATCCAGGAAGCGCAGAATGCCTGGAAGGATGACTTCGCTCTGAATAGCAT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000172320.2 |
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| 3UTR TCA 90 bp | TTGGGGTTCAGCAGGTCCTCCTGGGAGGAACCTAGGGGGAAGGCCTaGTCACTACAGTTTCTCTTGGATTCTGATGTCTTGCTGGTCCTG | + |
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Preference number: 1 (lower is better) Translates to: LGFSRSSWEEPRGKA*SLQFLLDSDVLLVL Trigger: CAGGACCAGCAAGACATCAGAATCCAAGAGAAACTGTAGTGATCAGGCCTTCCCCCTAGGTTCCTCCCAGGAGGACCTGCTGAACCCCAA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000005120.12 |
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| 3UTR GCA 90 bp | CCTCCTGCATGGCTTTCTTCTTCTCCCGGAAGTGCCTCCGTAGCATaGTATTCAGAGCGAAGTCATCCTTCCAGGCATTCTGCGCTTCCT | + |
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Preference number: 1 (lower is better) Translates to: PPAWLSSSPGSASVA*YSERSHPSRHSALP Trigger: AGGAAGCGCAGAATGCCTGGAAGGATGACTTCGCTCTGAATAGCATGCTACGGAGGCACTTCCGGGAGAAGAAGAAAGCCATGCAGGAGG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000172320.2 |
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| 3UTR CCA 90 bp | TGGGGCCACACTGCCGTCACAACGATGCAGCAGCATCTGCTTAGTTaGCTGGAAGTGAGGGCAGGGCAGCTACTAGATGAGTTTAGAAAC | + |
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Preference number: 1 (lower is better) Translates to: WGHTAVTTMQQHLLS*LEVRAGQLLDEFRN Trigger: GTTTCTAAACTCATCTAGTAGCTGCCCTGCCCTCACTTCCAGCCAACTAAGCAGATGCTGCTGCATCGTTGTGACGGCAGTGTGGCCCCA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000098578.10 |
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| 3UTR CCA 90 bp | TCTTCAGTGTGCTGCGGTCAGCCTCACCATGCTCTAGGCGGAACATaGCATCCGTCTCCAGCTTCTCTTTCTTCTCATGCTCTGTGGTCA | + |
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Preference number: 1 (lower is better) Translates to: SSVCCGQPHHALGGT*HPSPASLSSHALWS Trigger: TGACCACAGAGCATGAGAAGAAAGAGAAGCTGGAGACGGATGCCATGTTCCGCCTAGAGCATGGTGAGGCTGACCGCAGCACACTGAAGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000172320.2 |
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| 3UTR TCA 90 bp | CTTCCATGTCCCAACGCTCCTCCTTGCGACTGGCACCACTCACGATaGCATAGTCACAGTTGGCAGGGTCTGTTTGCATCTCGATGTAGT | + |
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Preference number: 1 (lower is better) Translates to: LPCPNAPPCDWHHSR*HSHSWQGLFASRCS Trigger: ACTACATCGAGATGCAAACAGACCCTGCCAACTGTGACTATGTCATCGTGAGTGGTGCCAGTCGCAAGGAGGAGCGTTGGGACATGGAAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000172320.2 |
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| 3UTR TCA 90 bp | TGTCTTGCTACCCTGGGTGGTTCCTGGTGGCCTTCTTTGTTCTTCTaGCAAGGAGTTGTCTGCTGCACACTGAGGACTTTCTGGAACGTC | + |
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Preference number: 1 (lower is better) Translates to: CLATLGGSWWPSLFF*QGVVCCTLRTFWNV Trigger: GACGTTCCAGAAAGTCCTCAGTGTGCAGCAGACAACTCCTTGTCAGAAGAACAAAGAAGGCCACCAGGAACCACCCAGGGTAGCAAGACA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000005120.12 |
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| 3UTR CCA 90 bp | GGCTGGATTAGGGTGTTTTTGAGGTTGTTTCACAAACATCCCTACTaGCTGGCCACTATGAGTGACCCACACCAGCCCATGACATGGAGT | + |
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Preference number: 1 (lower is better) Translates to: GWIRVFLRLFHKHPY*LATMSDPHQPMTWS Trigger: ACTCCATGTCATGGGCTGGTGTGGGTCACTCATAGTGGCCAGCCAGTAGGGATGTTTGTGAAACAACCTCAAAAACACCCTAATCCAGCC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000098578.10 |
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| 3UTR-3UTR TCA 90 bp | AGTCAGCCACCAGGGAGGCATTGGGGGTGTTGGGGTTCAGCAGGTCCTCCTGGGACTGGGTCCCTGGGCTaGGGGGAACCAAGAGCGGTG | + |
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Preference number: 2 (lower is better) Translates to: SQPPGRHWGCWGSAGPPGTGSLG*GEPRAV Trigger: CACCGCTCTTGGTTCCCCTCAGCCCAGGGACCCAGT...CCCAGGAGGACCTGCTGAACCCCAACACCCCCAATGCCTCCCTGGTGGCTGACT 66% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000005120.12 |
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| 3UTR CAA 90 bp | GGTGGTCTGCGGCCCTGGCACAGCTTCTTCAGGACGCTGCTAGCTTaGCTGCTGCTAGCACTGGGTCCCTGGGCTGAGGGGAACCAAGAG | + |
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Preference number: 2 (lower is better) Translates to: GGLRPWHSFFRTLLA*LLLALGPWAEGNQE Trigger: CTCTTGGTTCCCCTCAGCCCAGGGACCCAGTGCTAGCAGCAGCAAAGCTAGCAGCGTCCTGAAGAAGCTGTGCCAGGGCCGCAGACCACC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000005120.12 |
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| 3UTR-3UTR CCA 90 bp | ACTCGCTCTCTGAGTCAGAGTAGTCAGCCACCAGGGAGGCATTGGGGGTGTTGGGGTGGTCTGCGGCCCTaGCACAGCTTCTTCAGGACG | + |
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Preference number: 2 (lower is better) Translates to: TRSLSQSSQPPGRHWGCWGGLRP*HSFFRT Trigger: CGTCCTGAAGAAGCTGTGCCAGGGCCGCAGACCACC...CCAACACCCCCAATGCCTCCCTGGTGGCTGACTACTCTGACTCAGAGAGCGAGT 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000005120.12 |
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| 3UTR-3UTR CCA 90 bp | GAAGGTAGGTCTGTATCTGGGCTGGCAGCAATGTGCCAGTCCCTAAGGTCTGGACCACCAGGGAGGCATTaGGGGTGTTGGGGTTCAGCA | + |
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Preference number: 2 (lower is better) Translates to: EGRSVSGLAAMCQSLRSGPPGRH*GCWGSA Trigger: TGCTGAACCCCAACACCCCCAATGCCTCCCTGGTGG...TCCAGACCTTAGGGACTGGCACATTGCTGCCAGCCCAGATACAGACCTACCTTC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000005120.12 |
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| 3UTR-3UTR TCA 90 bp | TCCCTTACTCGCTCTCTGAGTCAGAGTAGTCAGCCACCAGGGAGGCATTGGGGGCCTAGGGGGAAGGCCTaGTCACTACAGTTTCTCTTG | + |
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Preference number: 2 (lower is better) Translates to: SLTRSLSQSSQPPGRHWGPRGKA*SLQFLL Trigger: CAAGAGAAACTGTAGTGATCAGGCCTTCCCCCTAGG...CCCCCAATGCCTCCCTGGTGGCTGACTACTCTGACTCAGAGAGCGAGTAAGGGA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000005120.12 |
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| 3UTR-3UTR TCA 90 bp | GGCACAAGAGGGATGGCTAGGCTGGCTTTTGCCTGCAGTGCCTGGTCCTTCTCTTGGCACCACTCACGATaGCATAGTCACAGTTGGCAG | + |
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Preference number: 2 (lower is better) Translates to: GTRGMARLAFACSAWSFSWHHSR*HSHSWQ Trigger: CTGCCAACTGTGACTATGTCATCGTGAGTGGTGCCA...AGAGAAGGACCAGGCACTGCAGGCAAAAGCCAGCCTAGCCATCCCTCTTGTGCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000172320.2 |
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| 3UTR-3UTR GCA 90 bp | GGCACAAGAGGGATGGCTAGGCTGGCTTTTGCCTGCAGTGCCTGGTCCTTCTCTTCTGTGGTCAGCACCTaGTCGTTGTCTTCCATGTCC | + |
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Preference number: 2 (lower is better) Translates to: GTRGMARLAFACSAWSFSSVVST*SLSSMS Trigger: GGACATGGAAGACAACGAGCAGGTGCTGACCACAGA...AGAGAAGGACCAGGCACTGCAGGCAAAAGCCAGCCTAGCCATCCCTCTTGTGCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000172320.2 |
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| 3UTR-3UTR GCA 90 bp | CAGAGCGAAGTCATCCTTCCAGGCATTCTGCGCTTCCTGGATGTGGCTGAGTGTCGGTCAGCCTCACCATaGTCTAGGCGGAACATGGCA | + |
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Preference number: 2 (lower is better) Translates to: QSEVILPGILRFLDVAECRSASP*SRRNMA Trigger: TGCCATGTTCCGCCTAGAGCATGGTGAGGCTGACCG...ACACTCAGCCACATCCAGGAAGCGCAGAATGCCTGGAAGGATGACTTCGCTCTG 57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000172320.2 |
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| 3UTR-3UTR GCA 90 bp | GGTAGGTCTGTATCTGGGCTGGCAGCAATGTGCCAGTCCCTAAGGTCTGGACGCGGTCCTGGATGCTTCTaGTGCCTCTTCAAGTGTCTT | + |
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Preference number: 2 (lower is better) Translates to: GRSVSGLAAMCQSLRSGRGPGCF*CLFKCL Trigger: AAGACACTTGAAGAGGCAGCAGAAGCATCCAGGACC...GCGTCCAGACCTTAGGGACTGGCACATTGCTGCCAGCCCAGATACAGACCTACC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000005120.12 |
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| 3UTR-3UTR CCA 90 bp | GGTAGGTCTGTATCTGGGCTGGCAGCAATGTGCCAGTCCCTAAGGTCTGGACGCATGTCTTGCTGGTCCTaGATGCTTCTGCTGCCTCTT | + |
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Preference number: 2 (lower is better) Translates to: GRSVSGLAAMCQSLRSGRMSCWS*MLLLPL Trigger: AAGAGGCAGCAGAAGCATCCAGGACCAGCAAGACAT...GCGTCCAGACCTTAGGGACTGGCACATTGCTGCCAGCCCAGATACAGACCTACC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000005120.12 |
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| 3UTR-3UTR CCA 90 bp | TTCAGTGTGCTGCGGTCAGCCTCACCATGCTCTAGGCGGAACATGGCATCCGTCTCTTCTCATGCTCTGTaGTCAGCACCTGCTCGTTGT | + |
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Preference number: 2 (lower is better) Translates to: FSVLRSASPCSRRNMASVSSHAL*SAPARC Trigger: ACAACGAGCAGGTGCTGACCACAGAGCATGAGAAGA...GACGGATGCCATGTTCCGCCTAGAGCATGGTGAGGCTGACCGCAGCACACTGAA 56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000172320.2 |
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| 3UTR-3UTR TCA 90 bp | TCCCGGAAGTGCCTCCGTAGCATGCTATTCAGAGCGAAGTCATCCTTCCAGGCAGGTGGCATTTCATCCTaGACCTGTAGATTGGAGTCG | + |
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Preference number: 2 (lower is better) Translates to: SRKCLRSMLFRAKSSFQAGGISS*TCRLES Trigger: CGACTCCAATCTACAGGTTCAGGATGAAATGCCACC...TGCCTGGAAGGATGACTTCGCTCTGAATAGCATGCTACGGAGGCACTTCCGGGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000172320.2 |
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| 3UTR-3UTR GCA 90 bp | TCAGCACCTGCTCGTTGTCTTCCATGTCCCAACGCTCCTCCTTGCGACTGGCACAACCTTCTTCTTTTCTaGATTGTAGCGCACACCCAT | + |
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Preference number: 2 (lower is better) Translates to: SAPARCLPCPNAPPCDWHNLLLF*IVAHTH Trigger: ATGGGTGTGCGCTACAATGCAGAAAAGAAGAAGGTT...GTGCCAGTCGCAAGGAGGAGCGTTGGGACATGGAAGACAACGAGCAGGTGCTGA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000172320.2 |
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| 3UTR-3UTR CCA 90 bp | ACTCGCTCTCTGAGTCAGAGTAGTCAGCCACCAGGGAGGCATTGGGGGTGTTGGCACTACAGTTTCTCTTaGATTCTGATGTCTTGCTGG | + |
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Preference number: 2 (lower is better) Translates to: TRSLSQSSQPPGRHWGCWHYSFS*ILMSCW Trigger: CCAGCAAGACATCAGAATCCAAGAGAAACTGTAGTG...CCAACACCCCCAATGCCTCCCTGGTGGCTGACTACTCTGACTCAGAGAGCGAGT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000005120.12 |
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| 3UTR-3UTR CCA 90 bp | CATGAGAAACCCTATTTTAAAGCTGGACCACACCTTGTCTCTATTGCTGGGGTGGGTCTGTATCTGGGCTaGCAGCAATGTGCCAGTCCC | + |
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Preference number: 2 (lower is better) Translates to: HEKPYFKAGPHLVSIAGVGLYLG*QQCASP Trigger: GGGACTGGCACATTGCTGCCAGCCCAGATACAGACC...CACCCCAGCAATAGAGACAAGGTGTGGTCCAGCTTTAAAATAGGGTTTCTCATG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000098578.10 |
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| 3UTR-3UTR GCA 90 bp | CATGAGAAACCCTATTTTAAAGCTGGACCACACCTTGTCTCTATTGCTGGGGTGAGGATGACGGTTGTCTaGCCACTATGCCTGGCTGGA | + |
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Preference number: 2 (lower is better) Translates to: HEKPYFKAGPHLVSIAGVRMTVV*PLCLAG Trigger: TCCAGCCAGGCATAGTGGGCAGACAACCGTCATCCT...CACCCCAGCAATAGAGACAAGGTGTGGTCCAGCTTTAAAATAGGGTTTCTCATG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000098578.10 |
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| 3UTR-3UTR GCA 90 bp | GGTCATCCTCAGACTCTGGCACAAGAGGGATGGCTAGGCTGGCTTTTGCCTGCAGAGTCGTGTAATAGTTaGCAACCTTCTTCTTTTCTG | + |
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Preference number: 2 (lower is better) Translates to: GHPQTLAQEGWLGWLLPAESCNS*QPSSFL Trigger: CAGAAAAGAAGAAGGTTGGCAACTATTACACGACTC...TGCAGGCAAAAGCCAGCCTAGCCATCCCTCTTGTGCCAGAGTCTGAGGATGACC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000172320.2 |
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| 3UTR-3UTR CCA 90 bp | TGCTATTCAGAGCGAAGTCATCCTTCCAGGCATTCTGCGCTTCCTGGATGTGGCCCTGAACCTGTAGATTaGAGTCGTGTAATAGTTGCC | + |
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Preference number: 2 (lower is better) Translates to: CYSERSHPSRHSALPGCGPEPVD*SRVIVA Trigger: GGCAACTATTACACGACTCCAATCTACAGGTTCAGG...GCCACATCCAGGAAGCGCAGAATGCCTGGAAGGATGACTTCGCTCTGAATAGCA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000172320.2 |
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| 3UTR-3UTR TCA 90 bp | CATGAGAAACCCTATTTTAAAGCTGGACCACACCTTGTCTCTATTGCTGGGGTGACCCACACCAGCCCATaGCATGGAGTTTGGATGTTC | + |
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Preference number: 2 (lower is better) Translates to: HEKPYFKAGPHLVSIAGVTHTSP*HGVWMF Trigger: GAACATCCAAACTCCATGTCATGGGCTGGTGTGGGT...CACCCCAGCAATAGAGACAAGGTGTGGTCCAGCTTTAAAATAGGGTTTCTCATG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000098578.10 |
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| 3UTR-3UTR CCA 90 bp | TTACAGAACGAGTTCCAGGACAGCCAGGGATACATGAGAAACCCTATTTTAAAGCAGCATCTGCTTAGTTaGCTGGAAGTGAGGGCAGGG | + |
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Preference number: 2 (lower is better) Translates to: LQNEFQDSQGYMRNPILKQHLLS*LEVRAG Trigger: CCCTGCCCTCACTTCCAGCCAACTAAGCAGATGCTG...CTTTAAAATAGGGTTTCTCATGTATCCCTGGCTGTCCTGGAACTCGTTCTGTAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000098578.10 |
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| 3UTR-3UTR CCA 90 bp | CATGAGAAACCCTATTTTAAAGCTGGACCACACCTTGTCTCTATTGCTGGGGTGCACAAACATCCCTACTaGCTGGCCACTATGAGTGAC | + |
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Preference number: 2 (lower is better) Translates to: HEKPYFKAGPHLVSIAGVHKHPY*LATMSD Trigger: GTCACTCATAGTGGCCAGCCAGTAGGGATGTTTGTG...CACCCCAGCAATAGAGACAAGGTGTGGTCCAGCTTTAAAATAGGGTTTCTCATG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000098578.10 |
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| 3UTR-3UTR CCA 90 bp | GGGATACATGAGAAACCCTATTTTAAAGCTGGACCACACCTTGTCTCTATTGCTTTAGCTTTATTTCTCTaGCTCCAGCAGCCTGGCCCT | + |
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Preference number: 2 (lower is better) Translates to: GIHEKPYFKAGPHLVSIALALFL*LQQPGP Trigger: AGGGCCAGGCTGCTGGAGCCAGAGAAATAAAGCTAA...AGCAATAGAGACAAGGTGTGGTCCAGCTTTAAAATAGGGTTTCTCATGTATCCC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000098578.10 |
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| 3UTR CCA 72 bp | CAGAGTAGTCAGCCACCAGGGAGGCATTGGGGGTGTTaGGGTTCAGCAGGTCCTCCTGGGAGGAACCTAGGG | + |
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Preference number: 3 (lower is better) Translates to: QSSQPPGRHWGC*GSAGPPGRNLG Trigger: CCCTAGGTTCCTCCCAGGAGGACCTGCTGAACCCCAACACCCCCAATGCCTCCCTGGTGGCTGACTACTCTG 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000005120.12 |
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| 3UTR-3UTR CAA 90 bp | AGTCAGCCACCAGGGAGGCATTGGGGGTGTTGGGGTTCAGCAGGTCCTCCTGGGGCCTCTTCAAGTGTCTaGCTACCCTGGGTGGTTCCT | + |
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Preference number: 3 (lower is better) Translates to: SQPPGRHWGCWGSAGPPGASSSV*LPWVVP Trigger: AGGAACCACCCAGGGTAGCAAGACACTTGAAGAGGC...CCCAGGAGGACCTGCTGAACCCCAACACCCCCAATGCCTCCCTGGTGGCTGACT 61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000005120.12 |
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| 3UTR TCA 72 bp | GCTAGCTTTGCTGCTGCTAGCACTGGGTCCCTGGGCTaGGGGGAACCAAGAGCGGTGGATGATCTCTGTCCG | + |
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Preference number: 3 (lower is better) Translates to: ASFAAASTGSLG*GEPRAVDDLCP Trigger: CGGACAGAGATCATCCACCGCTCTTGGTTCCCCTCAGCCCAGGGACCCAGTGCTAGCAGCAGCAAAGCTAGC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000005120.12 |
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| 3UTR CCA 72 bp | TCTCTGAGTCAGAGTAGTCAGCCACCAGGGAGGCATTaGGGGTGTTGGGGTTCAGCAGGTCCTCCTGGGAGG | + |
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Preference number: 3 (lower is better) Translates to: SLSQSSQPPGRH*GCWGSAGPPGR Trigger: CCTCCCAGGAGGACCTGCTGAACCCCAACACCCCCAATGCCTCCCTGGTGGCTGACTACTCTGACTCAGAGA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000005120.12 |
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| 3UTR GCA 72 bp | AGGGCCTTCTTCAGTGTGCTGCGGTCAGCCTCACCATaGTCTAGGCGGAACATGGCATCCGTCTCCAGCTTC | + |
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Preference number: 3 (lower is better) Translates to: RAFFSVLRSASP*SRRNMASVSSF Trigger: GAAGCTGGAGACGGATGCCATGTTCCGCCTAGAGCATGGTGAGGCTGACCGCAGCACACTGAAGAAGGCCCT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000172320.2 |
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| 3UTR-3UTR CAA 90 bp | TTCAGTGTGCTGCGGTCAGCCTCACCATGCTCTAGGCGGAACATGGCATCCGTCGTCAGCACCTGCTCGTaGTCTTCCATGTCCCAACGC | + |
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Preference number: 3 (lower is better) Translates to: FSVLRSASPCSRRNMASVVSTCS*SSMSQR Trigger: GCGTTGGGACATGGAAGACAACGAGCAGGTGCTGAC...GACGGATGCCATGTTCCGCCTAGAGCATGGTGAGGCTGACCGCAGCACACTGAA 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000172320.2 |
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| 3UTR-3UTR CAA 90 bp | CCACCAGGGAGGCATTGGGGGTGTTGGGGTTCAGCAGGTCCTCCTGGGAGGAACTTGGATTCTGATGTCTaGCTGGTCCTGGATGCTTCT | + |
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Preference number: 3 (lower is better) Translates to: PPGRHWGCWGSAGPPGRNLDSDV*LVLDAS Trigger: AGAAGCATCCAGGACCAGCAAGACATCAGAATCCAA...GTTCCTCCCAGGAGGACCTGCTGAACCCCAACACCCCCAATGCCTCCCTGGTGG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000005120.12 |
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| 3UTR CCA 72 bp | AGAGCGAAGTCATCCTTCCAGGCATTCTGCGCTTCCTaGATGTGGCTGAGTGTGGGGAGGGCCTTCTTCAGT | + |
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Preference number: 3 (lower is better) Translates to: RAKSSFQAFCAS*MWLSVGRAFFS Trigger: ACTGAAGAAGGCCCTCCCCACACTCAGCCACATCCAGGAAGCGCAGAATGCCTGGAAGGATGACTTCGCTCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000172320.2 |
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| 3UTR-3UTR CAA 90 bp | TCTTCAGTGTGCTGCGGTCAGCCTCACCATGCTCTAGGCGGAACATGGCATCCGGTTGGCAGGGTCTGTTaGCATCTCGATGTAGTTGAC | + |
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Preference number: 3 (lower is better) Translates to: SSVCCGQPHHALGGTWHPVGRVC*HLDVVD Trigger: GTCAACTACATCGAGATGCAAACAGACCCTGCCAAC...CGGATGCCATGTTCCGCCTAGAGCATGGTGAGGCTGACCGCAGCACACTGAAGA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000172320.2 |
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| 3UTR TCA 72 bp | CCCAACGCTCCTCCTTGCGACTGGCACCACTCACGATaGCATAGTCACAGTTGGCAGGGTCTGTTTGCATCT | + |
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Preference number: 3 (lower is better) Translates to: PNAPPCDWHHSR*HSHSWQGLFAS Trigger: AGATGCAAACAGACCCTGCCAACTGTGACTATGTCATCGTGAGTGGTGCCAGTCGCAAGGAGGAGCGTTGGG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000172320.2 |
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| 3UTR GCA 72 bp | TTAAAGCTGGACCACACCTTGTCTCTATTGCTGGGGTaGCAGGATGACGGTTGTCTGCCCACTATGCCTGGC | + |
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Preference number: 3 (lower is better) Translates to: LKLDHTLSLLLG*QDDGCLPTMPG Trigger: GCCAGGCATAGTGGGCAGACAACCGTCATCCTGGCACCCCAGCAATAGAGACAAGGTGTGGTCCAGCTTTAA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000098578.10 |
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| 3UTR CCA 72 bp | ACTGCCGTCACAACGATGCAGCAGCATCTGCTTAGTTaGCTGGAAGTGAGGGCAGGGCAGCTACTAGATGAG | + |
|
Preference number: 3 (lower is better) Translates to: TAVTTMQQHLLS*LEVRAGQLLDE Trigger: CTCATCTAGTAGCTGCCCTGCCCTCACTTCCAGCCAACTAAGCAGATGCTGCTGCATCGTTGTGACGGCAGT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000098578.10 |
||
| 3UTR TCA 72 bp | AGCAGGTCCTCCTGGGAGGAACCTAGGGGGAAGGCCTaGTCACTACAGTTTCTCTTGGATTCTGATGTCTTG | + |
|
Preference number: 3 (lower is better) Translates to: SRSSWEEPRGKA*SLQFLLDSDVL Trigger: CAAGACATCAGAATCCAAGAGAAACTGTAGTGATCAGGCCTTCCCCCTAGGTTCCTCCCAGGAGGACCTGCT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000005120.12 |
||
| 3UTR CCA 72 bp | CTTCTGCTGCCTCTTCAAGTGTCTTGCTACCCTGGGTaGTTCCTGGTGGCCTTCTTTGTTCTTCTGACAAGG | + |
|
Preference number: 3 (lower is better) Translates to: LLLPLQVSCYPG*FLVAFFVLLTR Trigger: CCTTGTCAGAAGAACAAAGAAGGCCACCAGGAACCACCCAGGGTAGCAAGACACTTGAAGAGGCAGCAGAAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000005120.12 |
||
| 3UTR CCA 72 bp | GGATGTTCTTCCTGCCTGCCGTTAGCTTTATTTCTCTaGCTCCAGCAGCCTGGCCCTCTTTCAACCTTCCTT | + |
|
Preference number: 3 (lower is better) Translates to: GCSSCLPLALFL*LQQPGPLSTFL Trigger: AAGGAAGGTTGAAAGAGGGCCAGGCTGCTGGAGCCAGAGAAATAAAGCTAACGGCAGGCAGGAAGAACATCC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000098578.10 |
||
| 3UTR TCA 72 bp | GTTTCACAAACATCCCTACTGGCTGGCCACTATGAGTaGCCCACACCAGCCCATGACATGGAGTTTGGATGT | + |
|
Preference number: 3 (lower is better) Translates to: VSQTSLLAGHYE*PTPAHDMEFGC Trigger: ACATCCAAACTCCATGTCATGGGCTGGTGTGGGTCACTCATAGTGGCCAGCCAGTAGGGATGTTTGTGAAAC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000098578.10 |
||
| 3UTR GCA 72 bp | ACACCAGCCCATGACATGGAGTTTGGATGTTCTTCCTaGCTGCCGTTAGCTTTATTTCTCTGGCTCCAGCAG | + |
|
Preference number: 3 (lower is better) Translates to: TPAHDMEFGCSS*LPLALFLWLQQ Trigger: CTGCTGGAGCCAGAGAAATAAAGCTAACGGCAGGCAGGAAGAACATCCAAACTCCATGTCATGGGCTGGTGT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000098578.10 |
||
| 3UTR CCA 72 bp | CCTGCCGTTAGCTTTATTTCTCTGGCTCCAGCAGCCTaGCCCTCTTTCAACCTTCCTTATGTAGTCCTTGAC | + |
|
Preference number: 3 (lower is better) Translates to: PAVSFISLAPAA*PSFNLPYVVLD Trigger: GTCAAGGACTACATAAGGAAGGTTGAAAGAGGGCCAGGCTGCTGGAGCCAGAGAAATAAAGCTAACGGCAGG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000098578.10 |
||
| 3UTR CCA 72 bp | AACCTAGGGGGAAGGCCTGATCACTACAGTTTCTCTTaGATTCTGATGTCTTGCTGGTCCTGGATGCTTCTG | + |
|
Preference number: 3 (lower is better) Translates to: NLGGRPDHYSFS*ILMSCWSWMLL Trigger: CAGAAGCATCCAGGACCAGCAAGACATCAGAATCCAAGAGAAACTGTAGTGATCAGGCCTTCCCCCTAGGTT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000005120.12 |
||
| 3UTR GCA 72 bp | CCTGATCACTACAGTTTCTCTTGGATTCTGATGTCTTaGTGGTCCTGGATGCTTCTGCTGCCTCTTCAAGTG | + |
|
Preference number: 3 (lower is better) Translates to: PDHYSFSWILMS*WSWMLLLPLQV Trigger: CACTTGAAGAGGCAGCAGAAGCATCCAGGACCAGCAAGACATCAGAATCCAAGAGAAACTGTAGTGATCAGG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000005120.12 |
||
| 3UTR CCA 72 bp | TGCCAGGATGACGGTTGTCTGCCCACTATGCCTGGCTaGATTAGGGTGTTTTTGAGGTTGTTTCACAAACAT | + |
|
Preference number: 3 (lower is better) Translates to: CQDDGCLPTMPG*IRVFLRLFHKH Trigger: ATGTTTGTGAAACAACCTCAAAAACACCCTAATCCAGCCAGGCATAGTGGGCAGACAACCGTCATCCTGGCA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000098578.10 |
||
| 3UTR CCA 72 bp | TACAGTTTCTCTTGGATTCTGATGTCTTGCTGGTCCTaGATGCTTCTGCTGCCTCTTCAAGTGTCTTGCTAC | + |
|
Preference number: 3 (lower is better) Translates to: YSFSWILMSCWS*MLLLPLQVSCY Trigger: GTAGCAAGACACTTGAAGAGGCAGCAGAAGCATCCAGGACCAGCAAGACATCAGAATCCAAGAGAAACTGTA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000005120.12 |
||
| 3UTR CCA 72 bp | GATCACTACAGTTTCTCTTGGATTCTGATGTCTTGCTaGTCCTGGATGCTTCTGCTGCCTCTTCAAGTGTCT | + |
|
Preference number: 3 (lower is better) Translates to: DHYSFSWILMSC*SWMLLLPLQVS Trigger: AGACACTTGAAGAGGCAGCAGAAGCATCCAGGACCAGCAAGACATCAGAATCCAAGAGAAACTGTAGTGATC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000005120.12 |
||
| 3UTR-3UTR CAA 90 bp | TACATGAGAAACCCTATTTTAAAGCTGGACCACACCTTGTCTCTATTGCTGGGGAGGGTGTTTTTGAGGTaGTTTCACAAACATCCCTAC | + |
|
Preference number: 3 (lower is better) Translates to: YMRNPILKLDHTLSLLLGRVFLR*FHKHPY Trigger: GTAGGGATGTTTGTGAAACAACCTCAAAAACACCCT...CCCCAGCAATAGAGACAAGGTGTGGTCCAGCTTTAAAATAGGGTTTCTCATGTA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000098578.10 |
||
| 3UTR CAA 72 bp | CGGCCCTGGCACAGCTTCTTCAGGACGCTGCTAGCTTaGCTGCTGCTAGCACTGGGTCCCTGGGCTGAGGGG | + |
|
Preference number: 4 (lower is better) Translates to: RPWHSFFRTLLA*LLLALGPWAEG Trigger: CCCCTCAGCCCAGGGACCCAGTGCTAGCAGCAGCAAAGCTAGCAGCGTCCTGAAGAAGCTGTGCCAGGGCCG 65% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000005120.12 |
||
| CDS-3UTR TCA 90 bp | AGTCAGCCACCAGGGAGGCATTGGGGGTGTTGGGGTTCAGCAGGTCCTCCTGGGAACAAGGATGCCTTGTaGGAGCTTCCGAGCCCGTTC | + |
|
Preference number: 4 (lower is better) Translates to: SQPPGRHWGCWGSAGPPGNKDAL*ELPSPF Trigger: GAACGGGCTCGGAAGCTCTCACAAGGCATCCTTGTT...CCCAGGAGGACCTGCTGAACCCCAACACCCCCAATGCCTCCCTGGTGGCTGACT 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000005120.12 |
||
| CDS-3UTR GCA 90 bp | ACCCTTCATCGGGCTTTGTGGGGCCACACTGCCGTCACAACGATGCAGCAGCATGCAGGGCAGCCAGCCTaGGGTCATCCTCAGACTCTG | + |
|
Preference number: 4 (lower is better) Translates to: TLHRALWGHTAVTTMQQHAGQPA*GHPQTL Trigger: CAGAGTCTGAGGATGACCGCAGGCTGGCTGCCCTGC...ATGCTGCTGCATCGTTGTGACGGCAGTGTGGCCCCACAAAGCCCGATGAAGGGT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000098578.10 |
||
| CDS-3UTR CCA 90 bp | GCACTGGGTCCCTGGGCTGAGGGGAACCAAGAGCGGTGGATGATCTCTGTCCGCACACCCATGCCGATGTaGTTCTTACAGCCGTCACAC | + |
|
Preference number: 4 (lower is better) Translates to: ALGPWAEGNQERWMISVRTPMPM*FLQPSH Trigger: GTGTGACGGCTGTAAGAACCACATCGGCATGGGTGT...GCGGACAGAGATCATCCACCGCTCTTGGTTCCCCTCAGCCCAGGGACCCAGTGC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000005120.12 |
||
| CDS-3UTR CCA 90 bp | GGACTTTCTGGAACGTCTCGAGACTTTCTCCTCACTATGCCCAGGTCCCCCACCTGCGCTTCCTGGATGTaGCTGAGTGTGGGGAGGGCC | + |
|
Preference number: 4 (lower is better) Translates to: GLSGTSRDFLLTMPRSPTCASWM*LSVGRA Trigger: GGCCCTCCCCACACTCAGCCACATCCAGGAAGCGCA...GGTGGGGGACCTGGGCATAGTGAGGAGAAAGTCTCGAGACGTTCCAGAAAGTCC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000005120.12 |
||
| CDS-3UTR GCA 90 bp | GGTGGTCTGCGGCCCTGGCACAGCTTCTTCAGGACGCTGCTAGCTTTGCTGCTGTCTGTGGTCAGCACCTaGTCGTTGTCTTCCATGTCC | + |
|
Preference number: 4 (lower is better) Translates to: GGLRPWHSFFRTLLALLLSVVST*SLSSMS Trigger: GGACATGGAAGACAACGAGCAGGTGCTGACCACAGA...CAGCAGCAAAGCTAGCAGCGTCCTGAAGAAGCTGTGCCAGGGCCGCAGACCACC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000005120.12 |
||
| CDS-3UTR CCA 90 bp | TTGCTGCTGCTAGCACTGGGTCCCTGGGCTGAGGGGAACCAAGAGCGGTGGATGCGTTCTCGAAGTGGGTaGCTGTTGTGGTATCGGTTG | + |
|
Preference number: 4 (lower is better) Translates to: LLLLALGPWAEGNQERWMRSRSG*LLWYRL Trigger: CAACCGATACCACAACAGCCACCCACTTCGAGAACG...CATCCACCGCTCTTGGTTCCCCTCAGCCCAGGGACCCAGTGCTAGCAGCAGCAA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000005120.12 |
||
| CDS-3UTR CCA 90 bp | TGGGGTTCAGCAGGTCCTCCTGGGAGGAACCTAGGGGGAAGGCCTGATCACTACAGCCCGTTCTCGAAGTaGGTGGCTGTTGTGGTATCG | + |
|
Preference number: 4 (lower is better) Translates to: WGSAGPPGRNLGGRPDHYSPFSK*VAVVVS Trigger: CGATACCACAACAGCCACCCACTTCGAGAACGGGCT...GTAGTGATCAGGCCTTCCCCCTAGGTTCCTCCCAGGAGGACCTGCTGAACCCCA 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000005120.12 |
||
| CDS-3UTR CCA 90 bp | TATCTCAAACCCTTCATCGGGCTTTGTGGGGCCACACTGCCGTCACAACGATGCTGCGCTTCCTGGATGTaGCTGAGTGTGGGGAGGGCC | + |
|
Preference number: 4 (lower is better) Translates to: YLKPFIGLCGATLPSQRCCASWM*LSVGRA Trigger: GGCCCTCCCCACACTCAGCCACATCCAGGAAGCGCA...GCATCGTTGTGACGGCAGTGTGGCCCCACAAAGCCCGATGAAGGGTTTGAGATA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000098578.10 |
||
| CDS-3UTR TCA 90 bp | TGGGGTTCAGCAGGTCCTCCTGGGAGGAACCTAGGGGGAAGGCCTGATCACTACTGGCACCACTCACGATaGCATAGTCACAGTTGGCAG | + |
|
Preference number: 4 (lower is better) Translates to: WGSAGPPGRNLGGRPDHYWHHSR*HSHSWQ Trigger: CTGCCAACTGTGACTATGTCATCGTGAGTGGTGCCA...GTAGTGATCAGGCCTTCCCCCTAGGTTCCTCCCAGGAGGACCTGCTGAACCCCA 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000005120.12 |
||
| CDS-3UTR GCA 90 bp | GGTAGGTCTGTATCTGGGCTGGCAGCAATGTGCCAGTCCCTAAGGTCTGGACGCTCCTTCCAGGCATTCTaGGCTTCCTGGATGTGGCTG | + |
|
Preference number: 4 (lower is better) Translates to: GRSVSGLAAMCQSLRSGRSFQAF*ASWMWL Trigger: CAGCCACATCCAGGAAGCGCAGAATGCCTGGAAGGA...GCGTCCAGACCTTAGGGACTGGCACATTGCTGCCAGCCCAGATACAGACCTACC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000005120.12 ENSMUST00000098578.10 |
||
| CDS-3UTR CCA 90 bp | TGGGGTTCAGCAGGTCCTCCTGGGAGGAACCTAGGGGGAAGGCCTGATCACTACAGTGGGTGGCTGTTGTaGTATCGGTTGAGAGAGCCA | + |
|
Preference number: 4 (lower is better) Translates to: WGSAGPPGRNLGGRPDHYSGWLL*YRLREP Trigger: TGGCTCTCTCAACCGATACCACAACAGCCACCCACT...GTAGTGATCAGGCCTTCCCCCTAGGTTCCTCCCAGGAGGACCTGCTGAACCCCA 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000005120.12 |
||
| CDS-3UTR CCA 90 bp | CACAGCTTCTTCAGGACGCTGCTAGCTTTGCTGCTGCTAGCACTGGGTCCCTGGGCTCTAGGCGGAACATaGCATCCGTCTCCAGCTTCT | + |
|
Preference number: 4 (lower is better) Translates to: HSFFRTLLALLLLALGPWALGGT*HPSPAS Trigger: AGAAGCTGGAGACGGATGCCATGTTCCGCCTAGAGC...CCAGGGACCCAGTGCTAGCAGCAGCAAAGCTAGCAGCGTCCTGAAGAAGCTGTG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000005120.12 |
||
| CDS-3UTR TCA 90 bp | CTGCTTAGTTGGCTGGAAGTGAGGGCAGGGCAGCTACTAGATGAGTTTAGAAACACTGGGTCCCTGGGCTaGGGGGAACCAAGAGCGGTG | + |
|
Preference number: 4 (lower is better) Translates to: LLSWLEVRAGQLLDEFRNTGSLG*GEPRAV Trigger: CACCGCTCTTGGTTCCCCTCAGCCCAGGGACCCAGT...GTTTCTAAACTCATCTAGTAGCTGCCCTGCCCTCACTTCCAGCCAACTAAGCAG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000098578.10 |
||
| CDS-3UTR CCA 90 bp | TGCTCTGTGGTCAGCACCTGCTCGTTGTCTTCCATGTCCCAACGCTCCTCCTTGAGCCCGTTCTCGAAGTaGGTGGCTGTTGTGGTATCG | + |
|
Preference number: 4 (lower is better) Translates to: CSVVSTCSLSSMSQRSSLSPFSK*VAVVVS Trigger: CGATACCACAACAGCCACCCACTTCGAGAACGGGCT...CAAGGAGGAGCGTTGGGACATGGAAGACAACGAGCAGGTGCTGACCACAGAGCA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000172320.2 |
||
| CDS-3UTR TCA 90 bp | TCCCTTACTCGCTCTCTGAGTCAGAGTAGTCAGCCACCAGGGAGGCATTGGGGGTGTTGTGGTATCGGTTaGGAGAGCCATGCTTTTCGG | + |
|
Preference number: 4 (lower is better) Translates to: SLTRSLSQSSQPPGRHWGCCGIG*ESHAFR Trigger: CCGAAAAGCATGGCTCTCTCAACCGATACCACAACA...CCCCCAATGCCTCCCTGGTGGCTGACTACTCTGACTCAGAGAGCGAGTAAGGGA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000005120.12 |
||
| CDS-3UTR TCA 90 bp | GGAACGTCTCGAGACTTTCTCCTCACTATGCCCAGGTCCCCCACCGTGCCTGTGGCATCTCGATGTAGTTaGCACAGAGGTGGCATTTCA | + |
|
Preference number: 4 (lower is better) Translates to: GTSRDFLLTMPRSPTVPVASRCS*HRGGIS Trigger: TGAAATGCCACCTCTGTGTCAACTACATCGAGATGC...CACAGGCACGGTGGGGGACCTGGGCATAGTGAGGAGAAAGTCTCGAGACGTTCC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000005120.12 |
||
| CDS-3UTR GCA 90 bp | GGACTTTCTGGAACGTCTCGAGACTTTCTCCTCACTATGCCCAGGTCCCCCACCTGTAGCGCACACCCATaGCGATGTGGTTCTTACAGC | + |
|
Preference number: 4 (lower is better) Translates to: GLSGTSRDFLLTMPRSPTCSAHP*RCGSYS Trigger: GCTGTAAGAACCACATCGGCATGGGTGTGCGCTACA...GGTGGGGGACCTGGGCATAGTGAGGAGAAAGTCTCGAGACGTTCCAGAAAGTCC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000005120.12 |
||
| CDS-3UTR GCA 90 bp | TATCTCAAACCCTTCATCGGGCTTTGTGGGGCCACACTGCCGTCACAACGATGCTCCTTCCAGGCATTCTaGGCTTCCTGGATGTGGCTG | + |
|
Preference number: 4 (lower is better) Translates to: YLKPFIGLCGATLPSQRCSFQAF*ASWMWL Trigger: CAGCCACATCCAGGAAGCGCAGAATGCCTGGAAGGA...GCATCGTTGTGACGGCAGTGTGGCCCCACAAAGCCCGATGAAGGGTTTGAGATA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000098578.10 |
||
| CDS-3UTR GCA 90 bp | CATGTCCCAACGCTCCTCCTTGCGACTGGCACCACTCACGATGACATAGTCACAACCCACGCTCACCCATaGCGATGTGGTTCTTACAGC | + |
|
Preference number: 4 (lower is better) Translates to: HVPTLLLATGTTHDDIVTTHAHP*RCGSYS Trigger: GCTGTAAGAACCACATCGGCATGGGTGAGCGTGGGT...TGTGACTATGTCATCGTGAGTGGTGCCAGTCGCAAGGAGGAGCGTTGGGACATG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000172320.2 |
||
| CDS-3UTR CCA 90 bp | CCAACGCTCCTCCTTGCGACTGGCACCACTCACGATGACATAGTCACAGTTGGCCGTTCTCGAAGTGGGTaGCTGTTGTGGTATCGGTTG | + |
|
Preference number: 4 (lower is better) Translates to: PTLLLATGTTHDDIVTVGRSRSG*LLWYRL Trigger: CAACCGATACCACAACAGCCACCCACTTCGAGAACG...GCCAACTGTGACTATGTCATCGTGAGTGGTGCCAGTCGCAAGGAGGAGCGTTGG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000172320.2 |
||
| CDS-3UTR CCA 90 bp | GAAGGTAGGTCTGTATCTGGGCTGGCAGCAATGTGCCAGTCCCTAAGGTCTGGATTTGCCTGCAGTGCCTaGTCCTTCTCTTCCTCCTCC | + |
|
Preference number: 4 (lower is better) Translates to: EGRSVSGLAAMCQSLRSGFACSA*SFSSSS Trigger: GGAGGAGGAAGAGAAGGACCAGGCACTGCAGGCAAA...TCCAGACCTTAGGGACTGGCACATTGCTGCCAGCCCAGATACAGACCTACCTTC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000098578.10 |
||
| CDS-3UTR CCA 90 bp | GAGTTTGGATGTTCTTCCTGCCTGCCGTTAGCTTTATTTCTCTGGCTCCAGCAGGGTGGTCTGCGGCCCTaGCACAGCTTCTTCAGGACG | + |
|
Preference number: 4 (lower is better) Translates to: EFGCSSCLPLALFLWLQQGGLRP*HSFFRT Trigger: CGTCCTGAAGAAGCTGTGCCAGGGCCGCAGACCACC...CTGCTGGAGCCAGAGAAATAAAGCTAACGGCAGGCAGGAAGAACATCCAAACTC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000098578.10 |
||
| CDS-3UTR CCA 90 bp | TGCTCTGTGGTCAGCACCTGCTCGTTGTCTTCCATGTCCCAACGCTCCTCCTTGTCACCCATGCCGATGTaGTTCTTACAGCCGTCACAC | + |
|
Preference number: 4 (lower is better) Translates to: CSVVSTCSLSSMSQRSSLSPMPM*FLQPSH Trigger: GTGTGACGGCTGTAAGAACCACATCGGCATGGGTGA...CAAGGAGGAGCGTTGGGACATGGAAGACAACGAGCAGGTGCTGACCACAGAGCA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000172320.2 |
||
| 3UTR CAA 72 bp | CTGGTCCTGGATGCTTCTGCTGCCTCTTCAAGTGTCTaGCTACCCTGGGTGGTTCCTGGTGGCCTTCTTTGT | + |
|
Preference number: 4 (lower is better) Translates to: LVLDASAASSSV*LPWVVPGGLLC Trigger: ACAAAGAAGGCCACCAGGAACCACCCAGGGTAGCAAGACACTTGAAGAGGCAGCAGAAGCATCCAGGACCAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000005120.12 |
||
| CDS-3UTR TCA 90 bp | ACTGCCGTCACAACGATGCAGCAGCATCTGCTTAGTTGGCTGGAAGTGAGGGCATGGCACCACTCACGATaGCATAGTCACAGTTGGCAG | + |
|
Preference number: 4 (lower is better) Translates to: TAVTTMQQHLLSWLEVRAWHHSR*HSHSWQ Trigger: CTGCCAACTGTGACTATGTCATCGTGAGTGGTGCCA...TGCCCTCACTTCCAGCCAACTAAGCAGATGCTGCTGCATCGTTGTGACGGCAGT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000098578.10 |
||
| CDS-3UTR GCA 90 bp | GAAGGTAGGTCTGTATCTGGGCTGGCAGCAATGTGCCAGTCCCTAAGGTCTGGATCTGTGGTCAGCACCTaGTCGTTGTCTTCCATGTCC | + |
|
Preference number: 4 (lower is better) Translates to: EGRSVSGLAAMCQSLRSGSVVST*SLSSMS Trigger: GGACATGGAAGACAACGAGCAGGTGCTGACCACAGA...TCCAGACCTTAGGGACTGGCACATTGCTGCCAGCCCAGATACAGACCTACCTTC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000005120.12 ENSMUST00000098578.10 |
||
| CDS-3UTR GCA 90 bp | ACTCGCTCTCTGAGTCAGAGTAGTCAGCCACCAGGGAGGCATTGGGGGTGTTGGTTCTCTTTCTTCTCATaGTCTGTGGTCAGCACCTGC | + |
|
Preference number: 4 (lower is better) Translates to: TRSLSQSSQPPGRHWGCWFSFFS*SVVSTC Trigger: GCAGGTGCTGACCACAGAGCATGAGAAGAAAGAGAA...CCAACACCCCCAATGCCTCCCTGGTGGCTGACTACTCTGACTCAGAGAGCGAGT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000005120.12 |
||
| CDS-3UTR GCA 90 bp | GGTAGGTCTGTATCTGGGCTGGCAGCAATGTGCCAGTCCCTAAGGTCTGGACGCTTCTCTTTCTTCTCATaGTCTGTGGTCAGCACCTGC | + |
|
Preference number: 4 (lower is better) Translates to: GRSVSGLAAMCQSLRSGRFSFFS*SVVSTC Trigger: GCAGGTGCTGACCACAGAGCATGAGAAGAAAGAGAA...GCGTCCAGACCTTAGGGACTGGCACATTGCTGCCAGCCCAGATACAGACCTACC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000005120.12 ENSMUST00000098578.10 |
||
| CDS-3UTR GCA 90 bp | GAAGGTAGGTCTGTATCTGGGCTGGCAGCAATGTGCCAGTCCCTAAGGTCTGGACTTGCTGGTCCTGGATaGTTCTGCTGCCTCTTCAAG | + |
|
Preference number: 4 (lower is better) Translates to: EGRSVSGLAAMCQSLRSGLAGPG*FCCLFK Trigger: CTTGAAGAGGCAGCAGAAGCATCCAGGACCAGCAAG...TCCAGACCTTAGGGACTGGCACATTGCTGCCAGCCCAGATACAGACCTACCTTC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000098578.10 |
||
| CDS-3UTR CCA 90 bp | GGACTTTCTGGAACGTCTCGAGACTTTCTCCTCACTATGCCCAGGTCCCCCACCTTCGGGGTTGAAGTCTaGGGGGTAGTACTTGTTCTG | + |
|
Preference number: 4 (lower is better) Translates to: GLSGTSRDFLLTMPRSPTFGVEV*GVVLVL Trigger: CAGAACAAGTACTACCCCCCAGACTTCAACCCCGAA...GGTGGGGGACCTGGGCATAGTGAGGAGAAAGTCTCGAGACGTTCCAGAAAGTCC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000005120.12 |
||
| CDS-3UTR CCA 90 bp | CCAACGCTCCTCCTTGCGACTGGCACCACTCACGATGACATAGTCACAGTTGGCTTCGGGGTTGAAGTCTaGGGGGTAGTACTTGTTCTG | + |
|
Preference number: 4 (lower is better) Translates to: PTLLLATGTTHDDIVTVGFGVEV*GVVLVL Trigger: CAGAACAAGTACTACCCCCCAGACTTCAACCCCGAA...GCCAACTGTGACTATGTCATCGTGAGTGGTGCCAGTCGCAAGGAGGAGCGTTGG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000172320.2 |
||
| 3UTR CAA 72 bp | TCTTTCTTCTCATGCTCTGTGGTCAGCACCTGCTCGTaGTCTTCCATGTCCCAACGCTCCTCCTTGCGACTG | + |
|
Preference number: 4 (lower is better) Translates to: SFFSCSVVSTCS*SSMSQRSSLRL Trigger: CAGTCGCAAGGAGGAGCGTTGGGACATGGAAGACAACGAGCAGGTGCTGACCACAGAGCATGAGAAGAAAGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000172320.2 |
||
| CDS-3UTR CCA 90 bp | GAGTTTGGATGTTCTTCCTGCCTGCCGTTAGCTTTATTTCTCTGGCTCCAGCAGTTCAGCAGGTCCTCCTaGGAGGAACCTAGGGGGAAG | + |
|
Preference number: 4 (lower is better) Translates to: EFGCSSCLPLALFLWLQQFSRSS*EEPRGK Trigger: CTTCCCCCTAGGTTCCTCCCAGGAGGACCTGCTGAA...CTGCTGGAGCCAGAGAAATAAAGCTAACGGCAGGCAGGAAGAACATCCAAACTC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000098578.10 |
||
| CDS-3UTR TCA 90 bp | TGCTATTCAGAGCGAAGTCATCCTTCCAGGCATTCTGCGCTTCCTGGATGTGGCTGTTGTGGTATCGGTTaGGAGAGCCATGCTTTTCGG | + |
|
Preference number: 4 (lower is better) Translates to: CYSERSHPSRHSALPGCGCCGIG*ESHAFR Trigger: CCGAAAAGCATGGCTCTCTCAACCGATACCACAACA...GCCACATCCAGGAAGCGCAGAATGCCTGGAAGGATGACTTCGCTCTGAATAGCA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000172320.2 |
||
| CDS-3UTR TCA 90 bp | GAGTTTGGATGTTCTTCCTGCCTGCCGTTAGCTTTATTTCTCTGGCTCCAGCAGAACAAGGATGCCTTGTaGGAGCTTCCGAGCCCGTTC | + |
|
Preference number: 4 (lower is better) Translates to: EFGCSSCLPLALFLWLQQNKDAL*ELPSPF Trigger: GAACGGGCTCGGAAGCTCTCACAAGGCATCCTTGTT...CTGCTGGAGCCAGAGAAATAAAGCTAACGGCAGGCAGGAAGAACATCCAAACTC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000098578.10 |
||
| CDS-3UTR TCA 90 bp | ACTGCCGTCACAACGATGCAGCAGCATCTGCTTAGTTGGCTGGAAGTGAGGGCACCTTCTTTGTTCTTCTaGCAAGGAGTTGTCTGCTGC | + |
|
Preference number: 4 (lower is better) Translates to: TAVTTMQQHLLSWLEVRAPSLFF*QGVVCC Trigger: GCAGCAGACAACTCCTTGTCAGAAGAACAAAGAAGG...TGCCCTCACTTCCAGCCAACTAAGCAGATGCTGCTGCATCGTTGTGACGGCAGT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000098578.10 |
||
| CDS-3UTR CCA 90 bp | GGGTGGTTCCTGGTGGCCTTCTTTGTTCTTCTGACAAGGAGTTGTCTGCTGCACTCTTCTCATGCTCTGTaGTCAGCACCTGCTCGTTGT | + |
|
Preference number: 4 (lower is better) Translates to: GWFLVAFFVLLTRSCLLHSSHAL*SAPARC Trigger: ACAACGAGCAGGTGCTGACCACAGAGCATGAGAAGA...GTGCAGCAGACAACTCCTTGTCAGAAGAACAAAGAAGGCCACCAGGAACCACCC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000005120.12 |
||
| CDS-3UTR CCA 90 bp | CTGCTTAGTTGGCTGGAAGTGAGGGCAGGGCAGCTACTAGATGAGTTTAGAAACGCTCTAGGCGGAACATaGCATCCGTCTCCAGCTTCT | + |
|
Preference number: 4 (lower is better) Translates to: LLSWLEVRAGQLLDEFRNALGGT*HPSPAS Trigger: AGAAGCTGGAGACGGATGCCATGTTCCGCCTAGAGC...GTTTCTAAACTCATCTAGTAGCTGCCCTGCCCTCACTTCCAGCCAACTAAGCAG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000098578.10 |
||
| CDS-3UTR CCA 90 bp | CATGAGAAACCCTATTTTAAAGCTGGACCACACCTTGTCTCTATTGCTGGGGTGCTAGCACTGGGTCCCTaGGCTGAGGGGAACCAAGAG | + |
|
Preference number: 4 (lower is better) Translates to: HEKPYFKAGPHLVSIAGVLALGP*AEGNQE Trigger: CTCTTGGTTCCCCTCAGCCCAGGGACCCAGTGCTAG...CACCCCAGCAATAGAGACAAGGTGTGGTCCAGCTTTAAAATAGGGTTTCTCATG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000098578.10 |
||
| CDS-3UTR CCA 90 bp | GTTTGGATGTTCTTCCTGCCTGCCGTTAGCTTTATTTCTCTGGCTCCAGCAGCCTCTTGCTACCCTGGGTaGTTCCTGGTGGCCTTCTTT | + |
|
Preference number: 4 (lower is better) Translates to: VWMFFLPAVSFISLAPAASCYPG*FLVAFF Trigger: AAAGAAGGCCACCAGGAACCACCCAGGGTAGCAAGA...GGCTGCTGGAGCCAGAGAAATAAAGCTAACGGCAGGCAGGAAGAACATCCAAAC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000098578.10 |
||
| CDS-3UTR CCA 90 bp | ACTTTCTGGAACGTCTCGAGACTTTCTCCTCACTATGCCCAGGTCCCCCACCGTCCTGAACCTGTAGATTaGAGTCGTGTAATAGTTGCC | + |
|
Preference number: 4 (lower is better) Translates to: TFWNVSRLSPHYAQVPHRPEPVD*SRVIVA Trigger: GGCAACTATTACACGACTCCAATCTACAGGTTCAGG...ACGGTGGGGGACCTGGGCATAGTGAGGAGAAAGTCTCGAGACGTTCCAGAAAGT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000005120.12 |
||
| CDS-3UTR CCA 90 bp | GCCCATGACATGGAGTTTGGATGTTCTTCCTGCCTGCCGTTAGCTTTATTTCTCAGTGTCTTGCTACCCTaGGTGGTTCCTGGTGGCCTT | + |
|
Preference number: 4 (lower is better) Translates to: AHDMEFGCSSCLPLALFLSVLLP*VVPGGL Trigger: AAGGCCACCAGGAACCACCCAGGGTAGCAAGACACT...GAGAAATAAAGCTAACGGCAGGCAGGAAGAACATCCAAACTCCATGTCATGGGC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000098578.10 |
||
| CDS-3UTR CCA 90 bp | AATAATAATCTGTATAGGAAGGTAGGTCTGTATCTGGGCTGGCAGCAATGTGCCCCACCAGGGAGGCATTaGGGGTGTTGGGGTTCAGCA | + |
|
Preference number: 4 (lower is better) Translates to: NNNLYRKVGLYLGWQQCAPPGRH*GCWGSA Trigger: TGCTGAACCCCAACACCCCCAATGCCTCCCTGGTGG...GGCACATTGCTGCCAGCCCAGATACAGACCTACCTTCCTATACAGATTATTATT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000098578.10 |
||
| 3UTR CAA 72 bp | TGTCTGCCCACTATGCCTGGCTGGATTAGGGTGTTTTaGAGGTTGTTTCACAAACATCCCTACTGGCTGGCC | + |
|
Preference number: 4 (lower is better) Translates to: CLPTMPGWIRVF*RLFHKHPYWLA Trigger: GGCCAGCCAGTAGGGATGTTTGTGAAACAACCTCAAAAACACCCTAATCCAGCCAGGCATAGTGGGCAGACA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000098578.10 |
||
| 3UTR CAA 72 bp | AACCCTATTTTAAAGCTGGACCACACCTTGTCTCTATaGCTGGGGTGCCAGGATGACGGTTGTCTGCCCACT | + |
|
Preference number: 4 (lower is better) Translates to: NPILKLDHTLSL*LGCQDDGCLPT Trigger: AGTGGGCAGACAACCGTCATCCTGGCACCCCAGCAATAGAGACAAGGTGTGGTCCAGCTTTAAAATAGGGTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000098578.10 |
||
| CDS-3UTR GCA 90 bp | GAAGGTAGGTCTGTATCTGGGCTGGCAGCAATGTGCCAGTCCCTAAGGTCTGGAAACCTTCTTCTTTTCTaGATTGTAGCGCACACCCAT | + |
|
Preference number: 4 (lower is better) Translates to: EGRSVSGLAAMCQSLRSGNLLLF*IVAHTH Trigger: ATGGGTGTGCGCTACAATGCAGAAAAGAAGAAGGTT...TCCAGACCTTAGGGACTGGCACATTGCTGCCAGCCCAGATACAGACCTACCTTC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000005120.12 ENSMUST00000098578.10 |
||
| CDS-3UTR TCA 90 bp | GCCCATGACATGGAGTTTGGATGTTCTTCCTGCCTGCCGTTAGCTTTATTTCTCTGTTGTGGTATCGGTTaGGAGAGCCATGCTTTTCGG | + |
|
Preference number: 4 (lower is better) Translates to: AHDMEFGCSSCLPLALFLCCGIG*ESHAFR Trigger: CCGAAAAGCATGGCTCTCTCAACCGATACCACAACA...GAGAAATAAAGCTAACGGCAGGCAGGAAGAACATCCAAACTCCATGTCATGGGC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000098578.10 |
||
| CDS-3UTR TCA 90 bp | GGCTGGATTAGGGTGTTTTTGAGGTTGTTTCACAAACATCCCTACTGGCTGGCCGCATCTCGATGTAGTTaGCACAGAGGTGGCATTTCA | + |
|
Preference number: 4 (lower is better) Translates to: GWIRVFLRLFHKHPYWLAASRCS*HRGGIS Trigger: TGAAATGCCACCTCTGTGTCAACTACATCGAGATGC...GGCCAGCCAGTAGGGATGTTTGTGAAACAACCTCAAAAACACCCTAATCCAGCC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000098578.10 |
||
| CDS-3UTR TCA 90 bp | CTGCTTAGTTGGCTGGAAGTGAGGGCAGGGCAGCTACTAGATGAGTTTAGAAACGTTTCTCTTGGATTCTaGTGTCTTGCTGGTCCTGGA | + |
|
Preference number: 4 (lower is better) Translates to: LLSWLEVRAGQLLDEFRNVSLGF*CLAGPG Trigger: TCCAGGACCAGCAAGACATCAGAATCCAAGAGAAAC...GTTTCTAAACTCATCTAGTAGCTGCCCTGCCCTCACTTCCAGCCAACTAAGCAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000098578.10 |
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| CDS-3UTR GCA 90 bp | CTCAGGTATCAGGGTTACATCAAGGCACAGGCATTCTCACCAAAACCAAATAAACGGTCAGCCTCACCATaGTCTAGGCGGAACATGGCA | + |
|
Preference number: 4 (lower is better) Translates to: LRYQGYIKAQAFSPKPNKRSASP*SRRNMA Trigger: TGCCATGTTCCGCCTAGAGCATGGTGAGGCTGACCG...TTTATTTGGTTTTGGTGAGAATGCCTGTGCCTTGATGTAACCCTGATACCTGAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000005120.12 ENSMUST00000098578.10 |
||
| CDS-3UTR GCA 90 bp | GGCTGGATTAGGGTGTTTTTGAGGTTGTTTCACAAACATCCCTACTGGCTGGCCTTCTCTTCCTCCTCCTaGATGGCTTTCTTCTTCTCC | + |
|
Preference number: 4 (lower is better) Translates to: GWIRVFLRLFHKHPYWLAFSSSS*MAFFFS Trigger: GGAGAAGAAGAAAGCCATGCAGGAGGAGGAAGAGAA...GGCCAGCCAGTAGGGATGTTTGTGAAACAACCTCAAAAACACCCTAATCCAGCC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000098578.10 |
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| CDS-3UTR GCA 90 bp | AATAATAATCTGTATAGGAAGGTAGGTCTGTATCTGGGCTGGCAGCAATGTGCCGGCTTTTGCCTGCAGTaGCTGGTCCTTCTCTTCCTC | + |
|
Preference number: 4 (lower is better) Translates to: NNNLYRKVGLYLGWQQCAGFCLQ*LVLLFL Trigger: GAGGAAGAGAAGGACCAGGCACTGCAGGCAAAAGCC...GGCACATTGCTGCCAGCCCAGATACAGACCTACCTTCCTATACAGATTATTATT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000098578.10 |
||
| CDS-3UTR GCA 90 bp | TTACAGAACGAGTTCCAGGACAGCCAGGGATACATGAGAAACCCTATTTTAAAGACTTTCTCCTCACTATaGCCAGGTCCCCCACCGTGC | + |
|
Preference number: 4 (lower is better) Translates to: LQNEFQDSQGYMRNPILKTFSSL*PGPPPC Trigger: GCACGGTGGGGGACCTGGGCATAGTGAGGAGAAAGT...CTTTAAAATAGGGTTTCTCATGTATCCCTGGCTGTCCTGGAACTCGTTCTGTAA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000098578.10 |
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| CDS-3UTR CCA 90 bp | CATGAGAAACCCTATTTTAAAGCTGGACCACACCTTGTCTCTATTGCTGGGGTGAGTGGGTGGCTGTTGTaGTATCGGTTGAGAGAGCCA | + |
|
Preference number: 4 (lower is better) Translates to: HEKPYFKAGPHLVSIAGVSGWLL*YRLREP Trigger: TGGCTCTCTCAACCGATACCACAACAGCCACCCACT...CACCCCAGCAATAGAGACAAGGTGTGGTCCAGCTTTAAAATAGGGTTTCTCATG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000098578.10 |
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| CDS-3UTR CCA 90 bp | CATGAGAAACCCTATTTTAAAGCTGGACCACACCTTGTCTCTATTGCTGGGGTGACACCCATGCCGATGTaGTTCTTACAGCCGTCACAC | + |
|
Preference number: 4 (lower is better) Translates to: HEKPYFKAGPHLVSIAGVTPMPM*FLQPSH Trigger: GTGTGACGGCTGTAAGAACCACATCGGCATGGGTGT...CACCCCAGCAATAGAGACAAGGTGTGGTCCAGCTTTAAAATAGGGTTTCTCATG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000098578.10 |
||
| CDS-3UTR CCA 90 bp | CTGGCCACTATGAGTGACCCACACCAGCCCATGACATGGAGTTTGGATGTTCTTCCTGAACCTGTAGATTaGAGTCGTGTAATAGTTGCC | + |
|
Preference number: 4 (lower is better) Translates to: LATMSDPHQPMTWSLDVLPEPVD*SRVIVA Trigger: GGCAACTATTACACGACTCCAATCTACAGGTTCAGG...AAGAACATCCAAACTCCATGTCATGGGCTGGTGTGGGTCACTCATAGTGGCCAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000098578.10 |
||
| CDS-3UTR TCA 90 bp | CATGAGAAACCCTATTTTAAAGCTGGACCACACCTTGTCTCTATTGCTGGGGTGGGTGGCATTTCATCCTaGACCTGTAGATTGGAGTCG | + |
|
Preference number: 4 (lower is better) Translates to: HEKPYFKAGPHLVSIAGVGGISS*TCRLES Trigger: CGACTCCAATCTACAGGTTCAGGATGAAATGCCACC...CACCCCAGCAATAGAGACAAGGTGTGGTCCAGCTTTAAAATAGGGTTTCTCATG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000098578.10 |
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| CDS-3UTR GCA 90 bp | GGGTGGTTCCTGGTGGCCTTCTTTGTTCTTCTGACAAGGAGTTGTCTGCTGCACGAGTCGTGTAATAGTTaGCAACCTTCTTCTTTTCTG | + |
|
Preference number: 4 (lower is better) Translates to: GWFLVAFFVLLTRSCLLHESCNS*QPSSFL Trigger: CAGAAAAGAAGAAGGTTGGCAACTATTACACGACTC...GTGCAGCAGACAACTCCTTGTCAGAAGAACAAAGAAGGCCACCAGGAACCACCC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000005120.12 |
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| CDS-3UTR CCA 90 bp | CATGAGAAACCCTATTTTAAAGCTGGACCACACCTTGTCTCTATTGCTGGGGTGTTCGGGGTTGAAGTCTaGGGGGTAGTACTTGTTCTG | + |
|
Preference number: 4 (lower is better) Translates to: HEKPYFKAGPHLVSIAGVFGVEV*GVVLVL Trigger: CAGAACAAGTACTACCCCCCAGACTTCAACCCCGAA...CACCCCAGCAATAGAGACAAGGTGTGGTCCAGCTTTAAAATAGGGTTTCTCATG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENSMUST00000098578.10 |
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| CDS-3UTR TCA 90 bp | TTACAGAACGAGTTCCAGGACAGCCAGGGATACATGAGAAACCCTATTTTAAAGCCTAGGGGGAAGGCCTaGTCACTACAGTTTCTCTTG | + |
|
Preference number: 4 (lower is better) Translates to: LQNEFQDSQGYMRNPILKPRGKA*SLQFLL Trigger: CAAGAGAAACTGTAGTGATCAGGCCTTCCCCCTAGG...CTTTAAAATAGGGTTTCTCATGTATCCCTGGCTGTCCTGGAACTCGTTCTGTAA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000098578.10 |
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| CDS-3UTR GCA 90 bp | CTCAGGTATCAGGGTTACATCAAGGCACAGGCATTCTCACCAAAACCAAATAAATGTAGCGCACACCCATaGCGATGTGGTTCTTACAGC | + |
|
Preference number: 4 (lower is better) Translates to: LRYQGYIKAQAFSPKPNKCSAHP*RCGSYS Trigger: GCTGTAAGAACCACATCGGCATGGGTGTGCGCTACA...TTTATTTGGTTTTGGTGAGAATGCCTGTGCCTTGATGTAACCCTGATACCTGAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000005120.12 ENSMUST00000098578.10 |
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| CDS-3UTR GCA 90 bp | CTGCTTAGTTGGCTGGAAGTGAGGGCAGGGCAGCTACTAGATGAGTTTAGAAACAACCTTCTTCTTTTCTaGATTGTAGCGCACACCCAT | + |
|
Preference number: 4 (lower is better) Translates to: LLSWLEVRAGQLLDEFRNNLLLF*IVAHTH Trigger: ATGGGTGTGCGCTACAATGCAGAAAAGAAGAAGGTT...GTTTCTAAACTCATCTAGTAGCTGCCCTGCCCTCACTTCCAGCCAACTAAGCAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000098578.10 |
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| CDS-3UTR GCA 90 bp | AACCAAATAAATAATAATCTGTATAGGAAGGTAGGTCTGTATCTGGGCTGGCAGCGGTCAGCCTCACCATaGTCTAGGCGGAACATGGCA | + |
|
Preference number: 4 (lower is better) Translates to: NQINNNLYRKVGLYLGWQRSASP*SRRNMA Trigger: TGCCATGTTCCGCCTAGAGCATGGTGAGGCTGACCG...CTGCCAGCCCAGATACAGACCTACCTTCCTATACAGATTATTATTTATTTGGTT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000005120.12 ENSMUST00000098578.10 |
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| CDS-3UTR GCA 90 bp | ACTATGCCTGGCTGGATTAGGGTGTTTTTGAGGTTGTTTCACAAACATCCCTACGGTCCTGGATGCTTCTaGTGCCTCTTCAAGTGTCTT | + |
|
Preference number: 4 (lower is better) Translates to: TMPGWIRVFLRLFHKHPYGPGCF*CLFKCL Trigger: AAGACACTTGAAGAGGCAGCAGAAGCATCCAGGACC...GTAGGGATGTTTGTGAAACAACCTCAAAAACACCCTAATCCAGCCAGGCATAGT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000098578.10 |
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| CDS-3UTR CCA 90 bp | CTCAGGTATCAGGGTTACATCAAGGCACAGGCATTCTCACCAAAACCAAATAAACGTTCTCGAAGTGGGTaGCTGTTGTGGTATCGGTTG | + |
|
Preference number: 4 (lower is better) Translates to: LRYQGYIKAQAFSPKPNKRSRSG*LLWYRL Trigger: CAACCGATACCACAACAGCCACCCACTTCGAGAACG...TTTATTTGGTTTTGGTGAGAATGCCTGTGCCTTGATGTAACCCTGATACCTGAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000005120.12 ENSMUST00000098578.10 |
||
| CDS-3UTR CCA 90 bp | CTACTAGATGAGTTTAGAAACAAGGCAGGGACAAAGAACAGCACTTTAATGCTCAGCCCGTTCTCGAAGTaGGTGGCTGTTGTGGTATCG | + |
|
Preference number: 4 (lower is better) Translates to: LLDEFRNKAGTKNSTLMLSPFSK*VAVVVS Trigger: CGATACCACAACAGCCACCCACTTCGAGAACGGGCT...GAGCATTAAAGTGCTGTTCTTTGTCCCTGCCTTGTTTCTAAACTCATCTAGTAG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000098578.10 |
||
| CDS-3UTR CCA 90 bp | TACATGAGAAACCCTATTTTAAAGCTGGACCACACCTTGTCTCTATTGCTGGGGTCTTCTCATGCTCTGTaGTCAGCACCTGCTCGTTGT | + |
|
Preference number: 4 (lower is better) Translates to: YMRNPILKLDHTLSLLLGSSHAL*SAPARC Trigger: ACAACGAGCAGGTGCTGACCACAGAGCATGAGAAGA...CCCCAGCAATAGAGACAAGGTGTGGTCCAGCTTTAAAATAGGGTTTCTCATGTA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000098578.10 |
||
| CDS-3UTR CCA 90 bp | AATAATAATCTGTATAGGAAGGTAGGTCTGTATCTGGGCTGGCAGCAATGTGCCATGTCTTGCTGGTCCTaGATGCTTCTGCTGCCTCTT | + |
|
Preference number: 4 (lower is better) Translates to: NNNLYRKVGLYLGWQQCAMSCWS*MLLLPL Trigger: AAGAGGCAGCAGAAGCATCCAGGACCAGCAAGACAT...GGCACATTGCTGCCAGCCCAGATACAGACCTACCTTCCTATACAGATTATTATT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000098578.10 |
||
| CDS-3UTR TCA 90 bp | CTCAGGTATCAGGGTTACATCAAGGCACAGGCATTCTCACCAAAACCAAATAAAGGTGGCATTTCATCCTaGACCTGTAGATTGGAGTCG | + |
|
Preference number: 4 (lower is better) Translates to: LRYQGYIKAQAFSPKPNKGGISS*TCRLES Trigger: CGACTCCAATCTACAGGTTCAGGATGAAATGCCACC...TTTATTTGGTTTTGGTGAGAATGCCTGTGCCTTGATGTAACCCTGATACCTGAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000005120.12 ENSMUST00000098578.10 |
||
| CDS-3UTR GCA 90 bp | GGGATACATGAGAAACCCTATTTTAAAGCTGGACCACACCTTGTCTCTATTGCTCAAGGAGTTGTCTGCTaGACACTGAGGACTTTCTGG | + |
|
Preference number: 4 (lower is better) Translates to: GIHEKPYFKAGPHLVSIAQGVVC*TLRTFW Trigger: CCAGAAAGTCCTCAGTGTGCAGCAGACAACTCCTTG...AGCAATAGAGACAAGGTGTGGTCCAGCTTTAAAATAGGGTTTCTCATGTATCCC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000098578.10 |
||
| CDS-3UTR CCA 90 bp | AACCAAATAAATAATAATCTGTATAGGAAGGTAGGTCTGTATCTGGGCTGGCAGACCCTGGGTGGTTCCTaGTGGCCTTCTTTGTTCTTC | + |
|
Preference number: 4 (lower is better) Translates to: NQINNNLYRKVGLYLGWQTLGGS*WPSLFF Trigger: GAAGAACAAAGAAGGCCACCAGGAACCACCCAGGGT...CTGCCAGCCCAGATACAGACCTACCTTCCTATACAGATTATTATTTATTTGGTT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000098578.10 |
||
| CDS-3UTR CCA 90 bp | CTCAGGTATCAGGGTTACATCAAGGCACAGGCATTCTCACCAAAACCAAATAAACACTACAGTTTCTCTTaGATTCTGATGTCTTGCTGG | + |
|
Preference number: 4 (lower is better) Translates to: LRYQGYIKAQAFSPKPNKHYSFS*ILMSCW Trigger: CCAGCAAGACATCAGAATCCAAGAGAAACTGTAGTG...TTTATTTGGTTTTGGTGAGAATGCCTGTGCCTTGATGTAACCCTGATACCTGAG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000098578.10 |
||
| CDS-3UTR CAA 90 bp | GCACTGGGTCCCTGGGCTGAGGGGAACCAAGAGCGGTGGATGATCTCTGTCCGCTCCCAACGCTCCTCCTaGCGACTGGCACCACTCACG | + |
|
Preference number: 5 (lower is better) Translates to: ALGPWAEGNQERWMISVRSQRSS*RLAPLT Trigger: CGTGAGTGGTGCCAGTCGCAAGGAGGAGCGTTGGGA...GCGGACAGAGATCATCCACCGCTCTTGGTTCCCCTCAGCCCAGGGACCCAGTGC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000005120.12 |
||
| CDS-3UTR CAA 90 bp | GGTAGGTCTGTATCTGGGCTGGCAGCAATGTGCCAGTCCCTAAGGTCTGGACGCGCCACCAGGGAGGCATaGGGGGTGTTGGGGTTCAGC | + |
|
Preference number: 5 (lower is better) Translates to: GRSVSGLAAMCQSLRSGRATREA*GVLGFS Trigger: GCTGAACCCCAACACCCCCAATGCCTCCCTGGTGGC...GCGTCCAGACCTTAGGGACTGGCACATTGCTGCCAGCCCAGATACAGACCTACC 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000098578.10 |
||
| CDS GCA 90 bp | CCTCATAAGAGTCCAGGGTGTGCAACCTTAGCAGGGCAGCCAGCCTaGGGTCATCCTCAGACTCTGGCACAAGAGGGATGGCTAGGCTGG | + |
|
Preference number: 5 (lower is better) Translates to: PHKSPGCATLAGQPA*GHPQTLAQEGWLGW Trigger: CCAGCCTAGCCATCCCTCTTGTGCCAGAGTCTGAGGATGACCGCAGGCTGGCTGCCCTGCTAAGGTTGCACACCCTGGACTCTTATGAGG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000098578.10 |
||
| CDS CCA 90 bp | TTCTTCAGGACGCTGCTAGCTTTGCTGCTGCTAGCACTGGGTCCCTaGGCTGAGGGGAACCAAGAGCGGTGGATGATCTCTGTCCGCTTC | + |
|
Preference number: 5 (lower is better) Translates to: FFRTLLALLLLALGP*AEGNQERWMISVRF Trigger: GAAGCGGACAGAGATCATCCACCGCTCTTGGTTCCCCTCAGCCCAGGGACCCAGTGCTAGCAGCAGCAAAGCTAGCAGCGTCCTGAAGAA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000098578.10 |
||
| CDS-3UTR CAA 90 bp | GTATCTCAAACCCTTCATCGGGCTTTGTGGGGCCACACTGCCGTCACAACGATGGAGGCATTGGGGGTGTaGGGGTTCAGCAGGTCCTCC | + |
|
Preference number: 5 (lower is better) Translates to: VSQTLHRALWGHTAVTTMEALGV*GFSRSS Trigger: GGAGGACCTGCTGAACCCCAACACCCCCAATGCCTC...CATCGTTGTGACGGCAGTGTGGCCCCACAAAGCCCGATGAAGGGTTTGAGATAC 59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000098578.10 |
||
| CDS-3UTR CAA 90 bp | TCCCTTACTCGCTCTCTGAGTCAGAGTAGTCAGCCACCAGGGAGGCATTGGGGGCGAAGTGGGTGGCTGTaGTGGTATCGGTTGAGAGAG | + |
|
Preference number: 5 (lower is better) Translates to: SLTRSLSQSSQPPGRHWGRSGWL*WYRLRE Trigger: CTCTCTCAACCGATACCACAACAGCCACCCACTTCG...CCCCCAATGCCTCCCTGGTGGCTGACTACTCTGACTCAGAGAGCGAGTAAGGGA 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000005120.12 |
||
| CDS-3UTR CAA 90 bp | TTGCTGCTGCTAGCACTGGGTCCCTGGGCTGAGGGGAACCAAGAGCGGTGGATGGTTGGCAGGGTCTGTTaGCATCTCGATGTAGTTGAC | + |
|
Preference number: 5 (lower is better) Translates to: LLLLALGPWAEGNQERWMVGRVC*HLDVVD Trigger: GTCAACTACATCGAGATGCAAACAGACCCTGCCAAC...CATCCACCGCTCTTGGTTCCCCTCAGCCCAGGGACCCAGTGCTAGCAGCAGCAA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000005120.12 |
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| CDS CCA 90 bp | CCTTGTGAGAGCTTCCGAGCCCGTTCTCGAAGTGGGTGGCTGTTGTaGTATCGGTTGAGAGAGCCATGCTTTTCGGGGTTGAAGTCTGGG | + |
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Preference number: 5 (lower is better) Translates to: PCESFRARSRSGWLL*YRLREPCFSGLKSG Trigger: CCCAGACTTCAACCCCGAAAAGCATGGCTCTCTCAACCGATACCACAACAGCCACCCACTTCGAGAACGGGCTCGGAAGCTCTCACAAGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000005120.12 ENSMUST00000098578.10 ENSMUST00000172320.2 |
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| CDS-3UTR CAA 90 bp | CTGCGGCCCTGGCACAGCTTCTTCAGGACGCTGCTAGCTTTGCTGCTGCTAGCACTGTTGTGGTATCGGTaGAGAGAGCCATGCTTTTCG | + |
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Preference number: 5 (lower is better) Translates to: LRPWHSFFRTLLALLLLALLWYR*REPCFS Trigger: CGAAAAGCATGGCTCTCTCAACCGATACCACAACAG...TGCTAGCAGCAGCAAAGCTAGCAGCGTCCTGAAGAAGCTGTGCCAGGGCCGCAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000005120.12 |
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| CDS-3UTR CAA 90 bp | GGAGGGCCTTCTTCAGTGTGCTGCGGTCAGCCTCACCATGCTCTAGGCGGAACACTGTTGTGGTATCGGTaGAGAGAGCCATGCTTTTCG | + |
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Preference number: 5 (lower is better) Translates to: GGPSSVCCGQPHHALGGTLLWYR*REPCFS Trigger: CGAAAAGCATGGCTCTCTCAACCGATACCACAACAG...TGTTCCGCCTAGAGCATGGTGAGGCTGACCGCAGCACACTGAAGAAGGCCCTCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000172320.2 |
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| CDS-3UTR CAA 90 bp | ACTTTCTGGAACGTCTCGAGACTTTCTCCTCACTATGCCCAGGTCCCCCACCGTGTCAGCACCTGCTCGTaGTCTTCCATGTCCCAACGC | + |
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Preference number: 5 (lower is better) Translates to: TFWNVSRLSPHYAQVPHRVSTCS*SSMSQR Trigger: GCGTTGGGACATGGAAGACAACGAGCAGGTGCTGAC...ACGGTGGGGGACCTGGGCATAGTGAGGAGAAAGTCTCGAGACGTTCCAGAAAGT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000005120.12 |
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| CDS-3UTR CAA 90 bp | GGTAGGTCTGTATCTGGGCTGGCAGCAATGTGCCAGTCCCTAAGGTCTGGACGCGTTGGCAGGGTCTGTTaGCATCTCGATGTAGTTGAC | + |
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Preference number: 5 (lower is better) Translates to: GRSVSGLAAMCQSLRSGRVGRVC*HLDVVD Trigger: GTCAACTACATCGAGATGCAAACAGACCCTGCCAAC...GCGTCCAGACCTTAGGGACTGGCACATTGCTGCCAGCCCAGATACAGACCTACC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000005120.12 ENSMUST00000098578.10 |
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| CDS-3UTR CAA 90 bp | TCTTCAGTGTGCTGCGGTCAGCCTCACCATGCTCTAGGCGGAACATGGCATCCGCCGTCACACCAGATGTaGTATGGCATTTCAAATCGG | + |
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Preference number: 5 (lower is better) Translates to: SSVCCGQPHHALGGTWHPPSHQM*YGISNR Trigger: CCGATTTGAAATGCCATACAACATCTGGTGTGACGG...CGGATGCCATGTTCCGCCTAGAGCATGGTGAGGCTGACCGCAGCACACTGAAGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000172320.2 |
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| CDS-3UTR CAA 90 bp | GGCTGGATTAGGGTGTTTTTGAGGTTGTTTCACAAACATCCCTACTGGCTGGCCGTCAGCACCTGCTCGTaGTCTTCCATGTCCCAACGC | + |
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Preference number: 5 (lower is better) Translates to: GWIRVFLRLFHKHPYWLAVSTCS*SSMSQR Trigger: GCGTTGGGACATGGAAGACAACGAGCAGGTGCTGAC...GGCCAGCCAGTAGGGATGTTTGTGAAACAACCTCAAAAACACCCTAATCCAGCC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000098578.10 |
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| CDS-3UTR CAA 90 bp | GGGATACATGAGAAACCCTATTTTAAAGCTGGACCACACCTTGTCTCTATTGCTTCCCAACGCTCCTCCTaGCGACTGGCACCACTCACG | + |
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Preference number: 5 (lower is better) Translates to: GIHEKPYFKAGPHLVSIASQRSS*RLAPLT Trigger: CGTGAGTGGTGCCAGTCGCAAGGAGGAGCGTTGGGA...AGCAATAGAGACAAGGTGTGGTCCAGCTTTAAAATAGGGTTTCTCATGTATCCC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000098578.10 |
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| CDS-3UTR CAA 90 bp | ATGCAGCAGCATCTGCTTAGTTGGCTGGAAGTGAGGGCAGGGCAGCTACTAGATTTGGATTCTGATGTCTaGCTGGTCCTGGATGCTTCT | + |
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Preference number: 5 (lower is better) Translates to: MQQHLLSWLEVRAGQLLDLDSDV*LVLDAS Trigger: AGAAGCATCCAGGACCAGCAAGACATCAGAATCCAA...ATCTAGTAGCTGCCCTGCCCTCACTTCCAGCCAACTAAGCAGATGCTGCTGCAT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000098578.10 |
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| CDS TCA 90 bp | CCAGATGTTGTATGGCATTTCAAATCGGATAACAAGGATGCCTTGTaGGAGCTTCCGAGCCCGTTCTCGAAGTGGGTGGCTGTTGTGGTA | + |
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Preference number: 5 (lower is better) Translates to: PDVVWHFKSDNKDAL*ELPSPFSKWVAVVV Trigger: TACCACAACAGCCACCCACTTCGAGAACGGGCTCGGAAGCTCTCACAAGGCATCCTTGTTATCCGATTTGAAATGCCATACAACATCTGG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000005120.12 ENSMUST00000098578.10 ENSMUST00000172320.2 |
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| CDS-3UTR CAA 90 bp | TATCTCAAACCCTTCATCGGGCTTTGTGGGGCCACACTGCCGTCACAACGATGCTCACTACAGTTTCTCTaGGATTCTGATGTCTTGCTG | + |
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Preference number: 5 (lower is better) Translates to: YLKPFIGLCGATLPSQRCSLQFL*DSDVLL Trigger: CAGCAAGACATCAGAATCCAAGAGAAACTGTAGTGA...GCATCGTTGTGACGGCAGTGTGGCCCCACAAAGCCCGATGAAGGGTTTGAGATA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000098578.10 |
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| CDS-3UTR CAA 90 bp | CTGCTTAGTTGGCTGGAAGTGAGGGCAGGGCAGCTACTAGATGAGTTTAGAAACCCGTCACACCAGATGTaGTATGGCATTTCAAATCGG | + |
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Preference number: 5 (lower is better) Translates to: LLSWLEVRAGQLLDEFRNPSHQM*YGISNR Trigger: CCGATTTGAAATGCCATACAACATCTGGTGTGACGG...GTTTCTAAACTCATCTAGTAGCTGCCCTGCCCTCACTTCCAGCCAACTAAGCAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000098578.10 |
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| CDS-3UTR CAA 90 bp | GGATACATGAGAAACCCTATTTTAAAGCTGGACCACACCTTGTCTCTATTGCTGCGAAGTGGGTGGCTGTaGTGGTATCGGTTGAGAGAG | + |
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Preference number: 5 (lower is better) Translates to: GYMRNPILKLDHTLSLLLRSGWL*WYRLRE Trigger: CTCTCTCAACCGATACCACAACAGCCACCCACTTCG...CAGCAATAGAGACAAGGTGTGGTCCAGCTTTAAAATAGGGTTTCTCATGTATCC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000098578.10 |
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| CDS-3UTR CAA 90 bp | TTACAGAACGAGTTCCAGGACAGCCAGGGATACATGAGAAACCCTATTTTAAAGGCCTCTTCAAGTGTCTaGCTACCCTGGGTGGTTCCT | + |
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Preference number: 5 (lower is better) Translates to: LQNEFQDSQGYMRNPILKASSSV*LPWVVP Trigger: AGGAACCACCCAGGGTAGCAAGACACTTGAAGAGGC...CTTTAAAATAGGGTTTCTCATGTATCCCTGGCTGTCCTGGAACTCGTTCTGTAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000098578.10 |
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| CDS-3UTR CAA 90 bp | GGATACATGAGAAACCCTATTTTAAAGCTGGACCACACCTTGTCTCTATTGCTGCTGTTGTGGTATCGGTaGAGAGAGCCATGCTTTTCG | + |
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Preference number: 5 (lower is better) Translates to: GYMRNPILKLDHTLSLLLLLWYR*REPCFS Trigger: CGAAAAGCATGGCTCTCTCAACCGATACCACAACAG...CAGCAATAGAGACAAGGTGTGGTCCAGCTTTAAAATAGGGTTTCTCATGTATCC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000098578.10 |
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| CDS-3UTR CAA 90 bp | AATAATAATCTGTATAGGAAGGTAGGTCTGTATCTGGGCTGGCAGCAATGTGCCCCGTCACACCAGATGTaGTATGGCATTTCAAATCGG | + |
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Preference number: 5 (lower is better) Translates to: NNNLYRKVGLYLGWQQCAPSHQM*YGISNR Trigger: CCGATTTGAAATGCCATACAACATCTGGTGTGACGG...GGCACATTGCTGCCAGCCCAGATACAGACCTACCTTCCTATACAGATTATTATT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000005120.12 ENSMUST00000098578.10 |
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| CDS GCA 72 bp | AGTCCAGGGTGTGCAACCTTAGCAGGGCAGCCAGCCTaGGGTCATCCTCAGACTCTGGCACAAGAGGGATGG | + |
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Preference number: 6 (lower is better) Translates to: SPGCATLAGQPA*GHPQTLAQEGW Trigger: CCATCCCTCTTGTGCCAGAGTCTGAGGATGACCGCAGGCTGGCTGCCCTGCTAAGGTTGCACACCCTGGACT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000098578.10 |
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| CDS CCA 72 bp | GCACTGGGTCCCTGGGCTGAGGGGAACCAAGAGCGGTaGATGATCTCTGTCCGCTTCATTCGCTGCTTGTCC | + |
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Preference number: 6 (lower is better) Translates to: ALGPWAEGNQER*MISVRFIRCLS Trigger: GGACAAGCAGCGAATGAAGCGGACAGAGATCATCCACCGCTCTTGGTTCCCCTCAGCCCAGGGACCCAGTGC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000098578.10 |
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| CDS TCA 72 bp | TGGGTCCCTGGGCTGAGGGGAACCAAGAGCGGTGGATaGTCTCTGTCCGCTTCATTCGCTGCTTGTCCTCAT | + |
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Preference number: 6 (lower is better) Translates to: WVPGLRGTKSGG*SLSASFAACPH Trigger: ATGAGGACAAGCAGCGAATGAAGCGGACAGAGATCATCCACCGCTCTTGGTTCCCCTCAGCCCAGGGACCCA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000098578.10 |
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| CDS CAA 72 bp | GAGAGCTTCCGAGCCCGTTCTCGAAGTGGGTGGCTGTaGTGGTATCGGTTGAGAGAGCCATGCTTTTCGGGG | + |
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Preference number: 6 (lower is better) Translates to: ESFRARSRSGWL*WYRLREPCFSG Trigger: CCCCGAAAAGCATGGCTCTCTCAACCGATACCACAACAGCCACCCACTTCGAGAACGGGCTCGGAAGCTCTC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000005120.12 ENSMUST00000098578.10 ENSMUST00000172320.2 |
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| CDS CCA 72 bp | AGCTTCCGAGCCCGTTCTCGAAGTGGGTGGCTGTTGTaGTATCGGTTGAGAGAGCCATGCTTTTCGGGGTTG | + |
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Preference number: 6 (lower is better) Translates to: SFRARSRSGWLL*YRLREPCFSGL Trigger: CAACCCCGAAAAGCATGGCTCTCTCAACCGATACCACAACAGCCACCCACTTCGAGAACGGGCTCGGAAGCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000005120.12 ENSMUST00000098578.10 ENSMUST00000172320.2 |
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| CDS CAA 72 bp | GCCCGTTCTCGAAGTGGGTGGCTGTTGTGGTATCGGTaGAGAGAGCCATGCTTTTCGGGGTTGAAGTCTGGG | + |
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Preference number: 6 (lower is better) Translates to: ARSRSGWLLWYR*REPCFSGLKSG Trigger: CCCAGACTTCAACCCCGAAAAGCATGGCTCTCTCAACCGATACCACAACAGCCACCCACTTCGAGAACGGGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000005120.12 ENSMUST00000098578.10 ENSMUST00000172320.2 |
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| CDS CCA 72 bp | CCTTGTGAGAGCTTCCGAGCCCGTTCTCGAAGTGGGTaGCTGTTGTGGTATCGGTTGAGAGAGCCATGCTTT | + |
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Preference number: 6 (lower is better) Translates to: PCESFRARSRSG*LLWYRLREPCF Trigger: AAAGCATGGCTCTCTCAACCGATACCACAACAGCCACCCACTTCGAGAACGGGCTCGGAAGCTCTCACAAGG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000005120.12 ENSMUST00000098578.10 ENSMUST00000172320.2 |
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| CDS CAA 90 bp | ATGCCTTGTGAGAGCTTCCGAGCCCGTTCTCGAAGTGGGTGGCTGTaGTGGTATCGGTTGAGAGAGCCATGCTTTTCGGGGTTGAAGTCT | + |
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Preference number: 6 (lower is better) Translates to: MPCESFRARSRSGWL*WYRLREPCFSGLKS Trigger: AGACTTCAACCCCGAAAAGCATGGCTCTCTCAACCGATACCACAACAGCCACCCACTTCGAGAACGGGCTCGGAAGCTCTCACAAGGCAT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000005120.12 ENSMUST00000098578.10 ENSMUST00000172320.2 |
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| CDS CAA 90 bp | CGCACACCCATGCCGATGTGGTTCTTACAGCCGTCACACCAGATGTaGTATGGCATTTCAAATCGGATAACAAGGATGCCTTGTGAGAGC | + |
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Preference number: 6 (lower is better) Translates to: RTPMPMWFLQPSHQM*YGISNRITRMPCES Trigger: GCTCTCACAAGGCATCCTTGTTATCCGATTTGAAATGCCATACAACATCTGGTGTGACGGCTGTAAGAACCACATCGGCATGGGTGTGCG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000005120.12 ENSMUST00000098578.10 |
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| CDS CAA 90 bp | CGCTCACCCATGCCGATGTGGTTCTTACAGCCGTCACACCAGATGTaGTATGGCATTTCAAATCGGATAACAAGGATGCCTTGTGAGAGC | + |
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Preference number: 6 (lower is better) Translates to: RSPMPMWFLQPSHQM*YGISNRITRMPCES Trigger: GCTCTCACAAGGCATCCTTGTTATCCGATTTGAAATGCCATACAACATCTGGTGTGACGGCTGTAAGAACCACATCGGCATGGGTGAGCG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000172320.2 |
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| CDS CAA 72 bp | ATGCCGATGTGGTTCTTACAGCCGTCACACCAGATGTaGTATGGCATTTCAAATCGGATAACAAGGATGCCT | + |
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Preference number: 6 (lower is better) Translates to: MPMWFLQPSHQM*YGISNRITRMP Trigger: AGGCATCCTTGTTATCCGATTTGAAATGCCATACAACATCTGGTGTGACGGCTGTAAGAACCACATCGGCAT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000005120.12 ENSMUST00000098578.10 ENSMUST00000172320.2 |
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