Pregenerated sensors for CCDC13 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000079235Ensembl transcript IDs: ENSMUST00000135986.9, ENSMUST00000142783.2, ENSMUST00000155511.8
Found 279 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | CCAGGGCCCCAGAGAGGCCCTAGGGCAAGGAAGGACAACAGCACCTaGTCAGGGAAACGCACCAGCCACCAGGCAGGAATGGCTGGCTCC | + |
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Preference number: 1 (lower is better) Translates to: PGPQRGPRARKDNST*SGKRTSHQAGMAGS Trigger: GGAGCCAGCCATTCCTGCCTGGTGGCTGGTGCGTTTCCCTGAGCAGGTGCTGTTGTCCTTCCTTGCCCTAGGGCCTCTCTGGGGCCCTGG 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000135986.9 ENSMUST00000155511.8 |
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| 3UTR CCA 90 bp | CGTAGTGCCTGCAGGAAGACCCCTTTCACCTGGCCCAGGGTCTGGTaGTACATGCGGAAGTCCTCCTCCTTCCCTCTCAGGGCACTGCCC | + |
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Preference number: 1 (lower is better) Translates to: RSACRKTPFTWPRVW*YMRKSSSFPLRALP Trigger: GGGCAGTGCCCTGAGAGGGAAGGAGGAGGACTTCCGCATGTACCACCAGACCCTGGGCCAGGTGAAAGGGGTCTTCCTGCAGGCACTACG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000155511.8 |
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| 3UTR CCA 90 bp | CAGGTGGATGAGCCATCAGGAAGCACCGAGGGGCTCATCTATGTGTaGAGAGCCCGTAGTAGCATCCCAGGGCCCCAGAGAGGCCCTAGG | + |
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Preference number: 1 (lower is better) Translates to: QVDEPSGSTEGLIYV*RARSSIPGPQRGPR Trigger: CCTAGGGCCTCTCTGGGGCCCTGGGATGCTACTACGGGCTCTCCACACATAGATGAGCCCCTCGGTGCTTCCTGATGGCTCATCCACCTG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000135986.9 ENSMUST00000155511.8 |
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| 3UTR CCA 90 bp | TGCCGTAGTGCCTGCAGGAAGACCCCTTTCACCTGGCCCAGGGTCTaGTGGTACATGCGGAAGTCCTCCTCCTTCCCTCTCAGGGCACTG | + |
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Preference number: 1 (lower is better) Translates to: CRSACRKTPFTWPRV*WYMRKSSSFPLRAL Trigger: CAGTGCCCTGAGAGGGAAGGAGGAGGACTTCCGCATGTACCACCAGACCCTGGGCCAGGTGAAAGGGGTCTTCCTGCAGGCACTACGGCA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000155511.8 |
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| 3UTR CCA 90 bp | TTGGCTTTCTGCTGCCGTAGTGCCTGCAGGAAGACCCCTTTCACCTaGCCCAGGGTCTGGTGGTACATGCGGAAGTCCTCCTCCTTCCCT | + |
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Preference number: 1 (lower is better) Translates to: LAFCCRSACRKTPFT*PRVWWYMRKSSSFP Trigger: AGGGAAGGAGGAGGACTTCCGCATGTACCACCAGACCCTGGGCCAGGTGAAAGGGGTCTTCCTGCAGGCACTACGGCAGCAGAAAGCCAA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000155511.8 |
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| 3UTR TCA 90 bp | TGCCTGCTCTGCTACGACACCAAACCGCTTCTAGGAGGAGCCGAGTaGGCGCTGCCTGAACCTGAAGTGTTGGTCCTCCAGGAGTTGAGC | + |
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Preference number: 1 (lower is better) Translates to: CLLCYDTKPLLGGAE*ALPEPEVLVLQELS Trigger: GCTCAACTCCTGGAGGACCAACACTTCAGGTTCAGGCAGCGCTCACTCGGCTCCTCCTAGAAGCGGTTTGGTGTCGTAGCAGAGCAGGCA 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000135986.9 ENSMUST00000155511.8 |
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| 3UTR GCA 90 bp | TCTGGTGGTACATGCGGAAGTCCTCCTCCTTCCCTCTCAGGGCACTaGCCAGGGCGTCCCTCAGTATTCCGTTCTCTTCCATCTGGATGG | + |
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Preference number: 1 (lower is better) Translates to: SGGTCGSPPPSLSGH*PGRPSVFRSLPSGW Trigger: CCATCCAGATGGAAGAGAACGGAATACTGAGGGACGCCCTGGGCAGTGCCCTGAGAGGGAAGGAGGAGGACTTCCGCATGTACCACCAGA 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000155511.8 |
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| 3UTR CCA 90 bp | CACTGCCCAGGGCGTCCCTCAGTATTCCGTTCTCTTCCATCTGGATaGCCAGCCTGGCATTCAGCTCCTGTATCTGGGACTCCATGGGCA | + |
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Preference number: 1 (lower is better) Translates to: HCPGRPSVFRSLPSG*PAWHSAPVSGTPWA Trigger: TGCCCATGGAGTCCCAGATACAGGAGCTGAATGCCAGGCTGGCCATCCAGATGGAAGAGAACGGAATACTGAGGGACGCCCTGGGCAGTG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000155511.8 |
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| 3UTR CCA 90 bp | AGGGCACTGCCCAGGGCGTCCCTCAGTATTCCGTTCTCTTCCATCTaGATGGCCAGCCTGGCATTCAGCTCCTGTATCTGGGACTCCATG | + |
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Preference number: 1 (lower is better) Translates to: RALPRASLSIPFSSI*MASLAFSSCIWDSM Trigger: CATGGAGTCCCAGATACAGGAGCTGAATGCCAGGCTGGCCATCCAGATGGAAGAGAACGGAATACTGAGGGACGCCCTGGGCAGTGCCCT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000155511.8 |
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| 3UTR GCA 90 bp | ACAGCTGTGTTCTACTGCTTGTTGGCTTTCTGCTGCCGTAGTGCCTaGAGGAAGACCCCTTTCACCTGGCCCAGGGTCTGGTGGTACATG | + |
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Preference number: 1 (lower is better) Translates to: TAVFYCLLAFCCRSA*RKTPFTWPRVWWYM Trigger: CATGTACCACCAGACCCTGGGCCAGGTGAAAGGGGTCTTCCTGCAGGCACTACGGCAGCAGAAAGCCAACAAGCAGTAGAACACAGCTGT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000155511.8 |
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| 3UTR GCA 90 bp | GGAGTTGAGCTAACAGCTGTGTTCTACTGCTTGTTGGCTTTCTGCTaGCGTAGTGCCTGCAGGAAGACCCCTTTCACCTGGCCCAGGGTC | + |
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Preference number: 1 (lower is better) Translates to: GVELTAVFYCLLAFC*RSACRKTPFTWPRV Trigger: GACCCTGGGCCAGGTGAAAGGGGTCTTCCTGCAGGCACTACGGCAGCAGAAAGCCAACAAGCAGTAGAACACAGCTGTTAGCTCAACTCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000155511.8 |
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| 3UTR GCA 90 bp | CCAGGAGTTGAGCTAACAGCTGTGTTCTACTGCTTGTTGGCTTTCTaGTGCCGTAGTGCCTGCAGGAAGACCCCTTTCACCTGGCCCAGG | + |
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Preference number: 1 (lower is better) Translates to: PGVELTAVFYCLLAF*CRSACRKTPFTWPR Trigger: CCTGGGCCAGGTGAAAGGGGTCTTCCTGCAGGCACTACGGCAGCAGAAAGCCAACAAGCAGTAGAACACAGCTGTTAGCTCAACTCCTGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000155511.8 |
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| 3UTR CCA 90 bp | GGGCGTCCCTCAGTATTCCGTTCTCTTCCATCTGGATGGCCAGCCTaGCATTCAGCTCCTGTATCTGGGACTCCATGGGCATATCGCAGA | + |
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Preference number: 1 (lower is better) Translates to: GRPSVFRSLPSGWPA*HSAPVSGTPWAYRR Trigger: TCTGCGATATGCCCATGGAGTCCCAGATACAGGAGCTGAATGCCAGGCTGGCCATCCAGATGGAAGAGAACGGAATACTGAGGGACGCCC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000155511.8 |
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| 3UTR TCA 90 bp | GCAGCCAAGGGTGAGCTTGAACTGACTGCCACGCTACACCACTGCTaGGTGCTGACATTACAGGTGTGCACCACCACACCCTTGTACACA | + |
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Preference number: 1 (lower is better) Translates to: AAKGELELTATLHHC*VLTLQVCTTTPLYT Trigger: TGTGTACAAGGGTGTGGTGGTGCACACCTGTAATGTCAGCACTCAGCAGTGGTGTAGCGTGGCAGTCAGTTCAAGCTCACCCTTGGCTGC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000142783.2 |
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| 3UTR TCA 90 bp | CCGAGTGAGCGCTGCCTGAACCTGAAGTGTTGGTCCTCCAGGAGTTaGGCTAACAGCTGTGTTCTACTGCTTGTTGGCTTTCTGCTGCCG | + |
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Preference number: 1 (lower is better) Translates to: PSERCLNLKCWSSRS*ANSCVLLLVGFLLP Trigger: CGGCAGCAGAAAGCCAACAAGCAGTAGAACACAGCTGTTAGCTCAACTCCTGGAGGACCAACACTTCAGGTTCAGGCAGCGCTCACTCGG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000155511.8 |
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| 3UTR CCA 90 bp | TTCTCTTCCATCTGGATGGCCAGCCTGGCATTCAGCTCCTGTATCTaGGACTCCATGGGCATATCGCAGAGCTGTGTGGAGGATGAGTCT | + |
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Preference number: 1 (lower is better) Translates to: FSSIWMASLAFSSCI*DSMGISQSCVEDES Trigger: AGACTCATCCTCCACACAGCTCTGCGATATGCCCATGGAGTCCCAGATACAGGAGCTGAATGCCAGGCTGGCCATCCAGATGGAAGAGAA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000155511.8 |
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| 3UTR GCA 90 bp | ACTGTGAAAGTAGACTTGTTATTTCAAGCTCAGGGCTCTGCCCTGTaGAGTAAGTACACAGAGAGGCTGGGCACAGCAGGATGGCCAGTG | + |
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Preference number: 1 (lower is better) Translates to: TVKVDLLFQAQGSAL*SKYTERLGTAGWPV Trigger: CACTGGCCATCCTGCTGTGCCCAGCCTCTCTGTGTACTTACTGCACAGGGCAGAGCCCTGAGCTTGAAATAACAAGTCTACTTTCACAGT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000135986.9 |
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| 3UTR-3UTR CCA 90 bp | GAAACGCACCAGCCACCAGGCAGGAATGGCTGGCTCCGCCCCTGGCTGGCTCCGGCCACCAGGCAGGAATaGCTGGCTCCGCCCCTGGCT | + |
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Preference number: 2 (lower is better) Translates to: ETHQPPGRNGWLRPWLAPATRQE*LAPPLA Trigger: AGCCAGGGGCGGAGCCAGCCATTCCTGCCTGGTGGC...CGGAGCCAGCCAGGGGCGGAGCCAGCCATTCCTGCCTGGTGGCTGGTGCGTTTC 70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000135986.9 ENSMUST00000155511.8 |
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| 3UTR-3UTR TCA 90 bp | GATGGCCAGTGGGTGCTAGGGCCGAGTGAGGGGCTACAGGGGAGGGCTAGATGGGGTGCTAGGGCCGAGTaGGGGGCTACAGGGGAGGGC | + |
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Preference number: 2 (lower is better) Translates to: DGQWVLGPSEGLQGRARWGARAE*GATGEG Trigger: GCCCTCCCCTGTAGCCCCTCACTCGGCCCTAGCACC...CCATCTAGCCCTCCCCTGTAGCCCCTCACTCGGCCCTAGCACCCACTGGCCATC 69% GC, longest homopolymer 5 nt, total homopolymer stretches 21 nt. Matches the following 2 transcripts: ENSMUST00000135986.9 ENSMUST00000155511.8 |
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| 3UTR-3UTR CCA 90 bp | CGCCCCTGGCTGGCTCCGCCCCTGCTCAGGTATCCTCAGCTTGCCTGCTCTGCTGCCACCAGGCAGGAATaGCTGGCTCCGCCCCTGGCT | + |
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Preference number: 2 (lower is better) Translates to: RPWLAPPLLRYPQLACSAATRQE*LAPPLA Trigger: AGCCAGGGGCGGAGCCAGCCATTCCTGCCTGGTGGC...AGCAGAGCAGGCAAGCTGAGGATACCTGAGCAGGGGCGGAGCCAGCCAGGGGCG 69% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000135986.9 ENSMUST00000155511.8 |
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| 3UTR CAA 90 bp | GGCTCCGCCCCTGGCTGGCTCCGCCCCTGCTCAGGTATCCTCAGCTaGCCTGCTCTGCTACGACACCAAACCGCTTCTAGGAGGAGCCGA | + |
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Preference number: 2 (lower is better) Translates to: GSAPGWLRPCSGILS*PALLRHQTASRRSR Trigger: TCGGCTCCTCCTAGAAGCGGTTTGGTGTCGTAGCAGAGCAGGCAAGCTGAGGATACCTGAGCAGGGGCGGAGCCAGCCAGGGGCGGAGCC 66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000135986.9 ENSMUST00000155511.8 |
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| 3UTR-3UTR CCA 90 bp | TCCGCCCCTGGCTGGCTCCGCCCCTGCTCAGGTATCCTCAGCTTGCCTGCTCTGTGGCCCAGGGTCTGGTaGTACATGCGGAAGTCCTCC | + |
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Preference number: 2 (lower is better) Translates to: SAPGWLRPCSGILSLPALWPRVW*YMRKSS Trigger: GGAGGACTTCCGCATGTACCACCAGACCCTGGGCCA...CAGAGCAGGCAAGCTGAGGATACCTGAGCAGGGGCGGAGCCAGCCAGGGGCGGA 66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000155511.8 |
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| 3UTR-3UTR GCA 90 bp | AGCATCCCAGGGCCCCAGAGAGGCCCTAGGGCAAGGAAGGACAACAGCACCTGCGGGTCTGGTGGTACATaGGGAAGTCCTCCTCCTTCC | + |
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Preference number: 2 (lower is better) Translates to: SIPGPQRGPRARKDNSTCGSGGT*GSPPPS Trigger: GGAAGGAGGAGGACTTCCGCATGTACCACCAGACCC...GCAGGTGCTGTTGTCCTTCCTTGCCCTAGGGCCTCTCTGGGGCCCTGGGATGCT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000155511.8 |
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| 3UTR-3UTR CCA 90 bp | TGGGCACAGCAGGATGGCCAGTGGGTGCTAGGGCCGAGTGAGGGGCTACAGGGGTCTGGATGGCCAGCCTaGCATTCAGCTCCTGTATCT | + |
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Preference number: 2 (lower is better) Translates to: WAQQDGQWVLGPSEGLQGSGWPA*HSAPVS Trigger: AGATACAGGAGCTGAATGCCAGGCTGGCCATCCAGA...CCCCTGTAGCCCCTCACTCGGCCCTAGCACCCACTGGCCATCCTGCTGTGCCCA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000155511.8 |
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| 3UTR-3UTR GCA 90 bp | AGCATCCCAGGGCCCCAGAGAGGCCCTAGGGCAAGGAAGGACAACAGCACCTGCCAGGTATCCTCAGCTTaGCTGCTCTGCTACGACACC | + |
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Preference number: 2 (lower is better) Translates to: SIPGPQRGPRARKDNSTCQVSSA*LLCYDT Trigger: GGTGTCGTAGCAGAGCAGGCAAGCTGAGGATACCTG...GCAGGTGCTGTTGTCCTTCCTTGCCCTAGGGCCTCTCTGGGGCCCTGGGATGCT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000135986.9 ENSMUST00000155511.8 |
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| 3UTR-3UTR TCA 90 bp | GTGCTAGGGCCGAGTGAGGGGCTACAGGGGAGGGCTAGATGGCTCCAGGTGGATGAGCTGTGTGGAGGATaGGTCTTTCTTGGCACTTCC | + |
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Preference number: 2 (lower is better) Translates to: VLGPSEGLQGRARWLQVDELCGG*VFLGTS Trigger: GGAAGTGCCAAGAAAGACTCATCCTCCACACAGCTC...ATCCACCTGGAGCCATCTAGCCCTCCCCTGTAGCCCCTCACTCGGCCCTAGCAC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000155511.8 |
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| 3UTR-3UTR TCA 90 bp | CGTAGTAGCATCCCAGGGCCCCAGAGAGGCCCTAGGGCAAGGAAGGACAACAGCTGGTCCTCCAGGAGTTaGGCTAACAGCTGTGTTCTA | + |
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Preference number: 2 (lower is better) Translates to: RSSIPGPQRGPRARKDNSWSSRS*ANSCVL Trigger: TAGAACACAGCTGTTAGCTCAACTCCTGGAGGACCA...GCTGTTGTCCTTCCTTGCCCTAGGGCCTCTCTGGGGCCCTGGGATGCTACTACG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000155511.8 |
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| 3UTR-3UTR GCA 90 bp | CTCCAGGTGGATGAGCCATCAGGAAGCACCGAGGGGCTCATCTATGTGTGGAGAAAGGACAACAGCACCTaGTCAGGGAAACGCACCAGC | + |
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Preference number: 2 (lower is better) Translates to: LQVDEPSGSTEGLIYVWRKDNST*SGKRTS Trigger: GCTGGTGCGTTTCCCTGAGCAGGTGCTGTTGTCCTT...TCTCCACACATAGATGAGCCCCTCGGTGCTTCCTGATGGCTCATCCACCTGGAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000135986.9 ENSMUST00000155511.8 |
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| 3UTR-3UTR CCA 90 bp | AGATGGCTCCAGGTGGATGAGCCATCAGGAAGCACCGAGGGGCTCATCTATGTGCCGTTCTCTTCCATCTaGATGGCCAGCCTGGCATTC | + |
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Preference number: 2 (lower is better) Translates to: RWLQVDEPSGSTEGLIYVPFSSI*MASLAF Trigger: GAATGCCAGGCTGGCCATCCAGATGGAAGAGAACGG...CACATAGATGAGCCCCTCGGTGCTTCCTGATGGCTCATCCACCTGGAGCCATCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000155511.8 |
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| 3UTR-3UTR CCA 90 bp | CCTGCAGGAAGACCCCTTTCACCTGGCCCAGGGTCTGGTGGTACATGCGGAAGTTATCGCAGAGCTGTGTaGAGGATGAGTCTTTCTTGG | + |
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Preference number: 2 (lower is better) Translates to: PAGRPLSPGPGSGGTCGSYRRAV*RMSLSW Trigger: CCAAGAAAGACTCATCCTCCACACAGCTCTGCGATA...ACTTCCGCATGTACCACCAGACCCTGGGCCAGGTGAAAGGGGTCTTCCTGCAGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000155511.8 |
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| 3UTR CAA 90 bp | GTTGGTCCTCCAGGAGTTGAGCTAACAGCTGTGTTCTACTGCTTGTaGGCTTTCTGCTGCCGTAGTGCCTGCAGGAAGACCCCTTTCACC | + |
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Preference number: 2 (lower is better) Translates to: VGPPGVELTAVFYCL*AFCCRSACRKTPFT Trigger: GGTGAAAGGGGTCTTCCTGCAGGCACTACGGCAGCAGAAAGCCAACAAGCAGTAGAACACAGCTGTTAGCTCAACTCCTGGAGGACCAAC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000155511.8 |
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| 3UTR CAA 90 bp | AGTGTTGGTCCTCCAGGAGTTGAGCTAACAGCTGTGTTCTACTGCTaGTTGGCTTTCTGCTGCCGTAGTGCCTGCAGGAAGACCCCTTTC | + |
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Preference number: 2 (lower is better) Translates to: SVGPPGVELTAVFYC*LAFCCRSACRKTPF Trigger: GAAAGGGGTCTTCCTGCAGGCACTACGGCAGCAGAAAGCCAACAAGCAGTAGAACACAGCTGTTAGCTCAACTCCTGGAGGACCAACACT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000155511.8 |
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| 3UTR TCA 72 bp | AGCACTGGGAACGGAGCCAGGGCTCTGTGCTTGCTGTaGCAGCCCTCAGCTGCCTGGGCTGTACCTGGCCCC | + |
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Preference number: 3 (lower is better) Translates to: STGNGARALCLL*QPSAAWAVPGP Trigger: GGGGCCAGGTACAGCCCAGGCAGCTGAGGGCTGTCACAGCAAGCACAGAGCCCTGGCTCCGTTCCCAGTGCT 67% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000142783.2 |
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| 3UTR CCA 72 bp | AGTACACAGAGAGGCTGGGCACAGCAGGATGGCCAGTaGGTGCTAGGGCCGAGTGAGGGGCTACAGGGGAGG | + |
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Preference number: 3 (lower is better) Translates to: STQRGWAQQDGQ*VLGPSEGLQGR Trigger: CCTCCCCTGTAGCCCCTCACTCGGCCCTAGCACCCACTGGCCATCCTGCTGTGCCCAGCCTCTCTGTGTACT 65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000135986.9 ENSMUST00000155511.8 |
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| 3UTR CCA 72 bp | CTAGGGCCGAGTGAGGGGCTACAGGGGAGGGCTAGATaGCTCCAGGTGGATGAGCCATCAGGAAGCACCGAG | + |
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Preference number: 3 (lower is better) Translates to: LGPSEGLQGRAR*LQVDEPSGSTE Trigger: CTCGGTGCTTCCTGATGGCTCATCCACCTGGAGCCATCTAGCCCTCCCCTGTAGCCCCTCACTCGGCCCTAG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000135986.9 ENSMUST00000155511.8 |
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| 3UTR-3UTR CAA 90 bp | CCCCTGGCTGGCTCCGCCCCTGCTCAGGTATCCTCAGCTTGCCTGCTCTGCTACCCTGAACCTGAAGTGTaGGTCCTCCAGGAGTTGAGC | + |
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Preference number: 3 (lower is better) Translates to: PLAGSAPAQVSSACLLCYPEPEV*VLQELS Trigger: GCTCAACTCCTGGAGGACCAACACTTCAGGTTCAGG...GTAGCAGAGCAGGCAAGCTGAGGATACCTGAGCAGGGGCGGAGCCAGCCAGGGG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000135986.9 ENSMUST00000155511.8 |
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| 3UTR GCA 72 bp | TACACAGCACTGGGAACGGAGCCAGGGCTCTGTGCTTaGTGTGACAGCCCTCAGCTGCCTGGGCTGTACCTG | + |
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Preference number: 3 (lower is better) Translates to: YTALGTEPGLCA*CDSPQLPGLYL Trigger: CAGGTACAGCCCAGGCAGCTGAGGGCTGTCACAGCAAGCACAGAGCCCTGGCTCCGTTCCCAGTGCTGTGTA 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000142783.2 |
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| 3UTR CCA 72 bp | GCCTGCAGGAAGACCCCTTTCACCTGGCCCAGGGTCTaGTGGTACATGCGGAAGTCCTCCTCCTTCCCTCTC | + |
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Preference number: 3 (lower is better) Translates to: ACRKTPFTWPRV*WYMRKSSSFPL Trigger: GAGAGGGAAGGAGGAGGACTTCCGCATGTACCACCAGACCCTGGGCCAGGTGAAAGGGGTCTTCCTGCAGGC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000155511.8 |
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| 3UTR CCA 72 bp | TGCTGCCGTAGTGCCTGCAGGAAGACCCCTTTCACCTaGCCCAGGGTCTGGTGGTACATGCGGAAGTCCTCC | + |
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Preference number: 3 (lower is better) Translates to: CCRSACRKTPFT*PRVWWYMRKSS Trigger: GGAGGACTTCCGCATGTACCACCAGACCCTGGGCCAGGTGAAAGGGGTCTTCCTGCAGGCACTACGGCAGCA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000155511.8 |
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| 3UTR-3UTR CAA 90 bp | GGCTGGCTCCGCCCCTGCTCAGGTATCCTCAGCTTGCCTGCTCTGCTACGACACTCAGGTATCCTCAGCTaGCCTGCTCTGCTACGACAC | + |
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Preference number: 3 (lower is better) Translates to: GWLRPCSGILSLPALLRHSGILS*PALLRH Trigger: GTGTCGTAGCAGAGCAGGCAAGCTGAGGATACCTGA...GTGTCGTAGCAGAGCAGGCAAGCTGAGGATACCTGAGCAGGGGCGGAGCCAGCC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000135986.9 ENSMUST00000155511.8 |
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| 3UTR GCA 72 bp | TCCGCCCCTGCTCAGGTATCCTCAGCTTGCCTGCTCTaGTACGACACCAAACCGCTTCTAGGAGGAGCCGAG | + |
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Preference number: 3 (lower is better) Translates to: SAPAQVSSACLL*YDTKPLLGGAE Trigger: CTCGGCTCCTCCTAGAAGCGGTTTGGTGTCGTAGCAGAGCAGGCAAGCTGAGGATACCTGAGCAGGGGCGGA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000135986.9 ENSMUST00000155511.8 |
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| 3UTR GCA 72 bp | CAGAGAGGCCCTAGGGCAAGGAAGGACAACAGCACCTaGTCAGGGAAACGCACCAGCCACCAGGCAGGAATG | + |
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Preference number: 3 (lower is better) Translates to: QRGPRARKDNST*SGKRTSHQAGM Trigger: CATTCCTGCCTGGTGGCTGGTGCGTTTCCCTGAGCAGGTGCTGTTGTCCTTCCTTGCCCTAGGGCCTCTCTG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000135986.9 ENSMUST00000155511.8 |
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| 3UTR CCA 72 bp | TGCAGGAAGACCCCTTTCACCTGGCCCAGGGTCTGGTaGTACATGCGGAAGTCCTCCTCCTTCCCTCTCAGG | + |
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Preference number: 3 (lower is better) Translates to: CRKTPFTWPRVW*YMRKSSSFPLR Trigger: CCTGAGAGGGAAGGAGGAGGACTTCCGCATGTACCACCAGACCCTGGGCCAGGTGAAAGGGGTCTTCCTGCA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000155511.8 |
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| 3UTR-3UTR CAA 90 bp | CGTAGTAGCATCCCAGGGCCCCAGAGAGGCCCTAGGGCAAGGAAGGACAACAGCTCAGGTATCCTCAGCTaGCCTGCTCTGCTACGACAC | + |
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Preference number: 3 (lower is better) Translates to: RSSIPGPQRGPRARKDNSSGILS*PALLRH Trigger: GTGTCGTAGCAGAGCAGGCAAGCTGAGGATACCTGA...GCTGTTGTCCTTCCTTGCCCTAGGGCCTCTCTGGGGCCCTGGGATGCTACTACG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000135986.9 ENSMUST00000155511.8 |
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| 3UTR TCA 72 bp | TGCTACGACACCAAACCGCTTCTAGGAGGAGCCGAGTaGGCGCTGCCTGAACCTGAAGTGTTGGTCCTCCAG | + |
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Preference number: 3 (lower is better) Translates to: CYDTKPLLGGAE*ALPEPEVLVLQ Trigger: CTGGAGGACCAACACTTCAGGTTCAGGCAGCGCTCACTCGGCTCCTCCTAGAAGCGGTTTGGTGTCGTAGCA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000135986.9 ENSMUST00000155511.8 |
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| 3UTR GCA 72 bp | TTCTACTGCTTGTTGGCTTTCTGCTGCCGTAGTGCCTaGAGGAAGACCCCTTTCACCTGGCCCAGGGTCTGG | + |
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Preference number: 3 (lower is better) Translates to: FYCLLAFCCRSA*RKTPFTWPRVW Trigger: CCAGACCCTGGGCCAGGTGAAAGGGGTCTTCCTGCAGGCACTACGGCAGCAGAAAGCCAACAAGCAGTAGAA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000155511.8 |
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| 3UTR CCA 72 bp | TACAGGTGTGCACCACCACACCCTTGTACACAGCACTaGGAACGGAGCCAGGGCTCTGTGCTTGCTGTGACA | + |
|
Preference number: 3 (lower is better) Translates to: YRCAPPHPCTQH*ERSQGSVLAVT Trigger: TGTCACAGCAAGCACAGAGCCCTGGCTCCGTTCCCAGTGCTGTGTACAAGGGTGTGGTGGTGCACACCTGTA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000142783.2 |
||
| 3UTR CCA 72 bp | CCCAGGGCGTCCCTCAGTATTCCGTTCTCTTCCATCTaGATGGCCAGCCTGGCATTCAGCTCCTGTATCTGG | + |
|
Preference number: 3 (lower is better) Translates to: PRASLSIPFSSI*MASLAFSSCIW Trigger: CCAGATACAGGAGCTGAATGCCAGGCTGGCCATCCAGATGGAAGAGAACGGAATACTGAGGGACGCCCTGGG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000155511.8 |
||
| 3UTR-3UTR CAA 90 bp | TCCAGGTGGATGAGCCATCAGGAAGCACCGAGGGGCTCATCTATGTGTGGAGAGCCTGAACCTGAAGTGTaGGTCCTCCAGGAGTTGAGC | + |
|
Preference number: 3 (lower is better) Translates to: SRWMSHQEAPRGSSMCGEPEPEV*VLQELS Trigger: GCTCAACTCCTGGAGGACCAACACTTCAGGTTCAGG...CTCTCCACACATAGATGAGCCCCTCGGTGCTTCCTGATGGCTCATCCACCTGGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000135986.9 ENSMUST00000155511.8 |
||
| 3UTR TCA 72 bp | GGTGAGCTTGAACTGACTGCCACGCTACACCACTGCTaGGTGCTGACATTACAGGTGTGCACCACCACACCC | + |
|
Preference number: 3 (lower is better) Translates to: GELELTATLHHC*VLTLQVCTTTP Trigger: GGGTGTGGTGGTGCACACCTGTAATGTCAGCACTCAGCAGTGGTGTAGCGTGGCAGTCAGTTCAAGCTCACC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000142783.2 |
||
| 3UTR CCA 72 bp | ATCTGGATGGCCAGCCTGGCATTCAGCTCCTGTATCTaGGACTCCATGGGCATATCGCAGAGCTGTGTGGAG | + |
|
Preference number: 3 (lower is better) Translates to: IWMASLAFSSCI*DSMGISQSCVE Trigger: CTCCACACAGCTCTGCGATATGCCCATGGAGTCCCAGATACAGGAGCTGAATGCCAGGCTGGCCATCCAGAT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000155511.8 |
||
| 3UTR CCA 72 bp | GGGCGTCCCTCAGTATTCCGTTCTCTTCCATCTGGATaGCCAGCCTGGCATTCAGCTCCTGTATCTGGGACT | + |
|
Preference number: 3 (lower is better) Translates to: GRPSVFRSLPSG*PAWHSAPVSGT Trigger: AGTCCCAGATACAGGAGCTGAATGCCAGGCTGGCCATCCAGATGGAAGAGAACGGAATACTGAGGGACGCCC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000155511.8 |
||
| 3UTR CCA 72 bp | CCAGCCTGGCATTCAGCTCCTGTATCTGGGACTCCATaGGCATATCGCAGAGCTGTGTGGAGGATGAGTCTT | + |
|
Preference number: 3 (lower is better) Translates to: PAWHSAPVSGTP*AYRRAVWRMSL Trigger: AAGACTCATCCTCCACACAGCTCTGCGATATGCCCATGGAGTCCCAGATACAGGAGCTGAATGCCAGGCTGG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000155511.8 |
||
| 3UTR GCA 72 bp | CTAACAGCTGTGTTCTACTGCTTGTTGGCTTTCTGCTaGCGTAGTGCCTGCAGGAAGACCCCTTTCACCTGG | + |
|
Preference number: 3 (lower is better) Translates to: LTAVFYCLLAFC*RSACRKTPFTW Trigger: CCAGGTGAAAGGGGTCTTCCTGCAGGCACTACGGCAGCAGAAAGCCAACAAGCAGTAGAACACAGCTGTTAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000155511.8 |
||
| 3UTR GCA 72 bp | GAGCTAACAGCTGTGTTCTACTGCTTGTTGGCTTTCTaGTGCCGTAGTGCCTGCAGGAAGACCCCTTTCACC | + |
|
Preference number: 3 (lower is better) Translates to: ELTAVFYCLLAF*CRSACRKTPFT Trigger: GGTGAAAGGGGTCTTCCTGCAGGCACTACGGCAGCAGAAAGCCAACAAGCAGTAGAACACAGCTGTTAGCTC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000155511.8 |
||
| 3UTR CCA 72 bp | TCAGTATTCCGTTCTCTTCCATCTGGATGGCCAGCCTaGCATTCAGCTCCTGTATCTGGGACTCCATGGGCA | + |
|
Preference number: 3 (lower is better) Translates to: SVFRSLPSGWPA*HSAPVSGTPWA Trigger: TGCCCATGGAGTCCCAGATACAGGAGCTGAATGCCAGGCTGGCCATCCAGATGGAAGAGAACGGAATACTGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000155511.8 |
||
| 3UTR GCA 72 bp | GTAGACTTGTTATTTCAAGCTCAGGGCTCTGCCCTGTaGAGTAAGTACACAGAGAGGCTGGGCACAGCAGGA | + |
|
Preference number: 3 (lower is better) Translates to: VDLLFQAQGSAL*SKYTERLGTAG Trigger: TCCTGCTGTGCCCAGCCTCTCTGTGTACTTACTGCACAGGGCAGAGCCCTGAGCTTGAAATAACAAGTCTAC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000135986.9 ENSMUST00000155511.8 |
||
| 3UTR TCA 72 bp | CGCTGCCTGAACCTGAAGTGTTGGTCCTCCAGGAGTTaGGCTAACAGCTGTGTTCTACTGCTTGTTGGCTTT | + |
|
Preference number: 3 (lower is better) Translates to: RCLNLKCWSSRS*ANSCVLLLVGF Trigger: AAAGCCAACAAGCAGTAGAACACAGCTGTTAGCTCAACTCCTGGAGGACCAACACTTCAGGTTCAGGCAGCG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000155511.8 |
||
| CDS-3UTR CCA 90 bp | CGCACCAGCCACCAGGCAGGAATGGCTGGCTCCGCCCCTGGCTGGCTCCGCCCCACCTGGCCCAGGGTCTaGTGGTACATGCGGAAGTCC | + |
|
Preference number: 4 (lower is better) Translates to: RTSHQAGMAGSAPGWLRPTWPRV*WYMRKS Trigger: GGACTTCCGCATGTACCACCAGACCCTGGGCCAGGT...GGGGCGGAGCCAGCCAGGGGCGGAGCCAGCCATTCCTGCCTGGTGGCTGGTGCG 70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000135986.9 |
||
| CDS-3UTR CCA 90 bp | CGCACCAGCCACCAGGCAGGAATGGCTGGCTCCGCCCCTGGCTGGCTCCGCCCCCCGTTCTCTTCCATCTaGATGGCCAGCCTGGCATTC | + |
|
Preference number: 4 (lower is better) Translates to: RTSHQAGMAGSAPGWLRPPFSSI*MASLAF Trigger: GAATGCCAGGCTGGCCATCCAGATGGAAGAGAACGG...GGGGCGGAGCCAGCCAGGGGCGGAGCCAGCCATTCCTGCCTGGTGGCTGGTGCG 68% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000135986.9 |
||
| CDS-3UTR CCA 90 bp | GGCCAGTGGGTGCTAGGGCCGAGTGAGGGGCTACAGGGGAGGGCTAGATGGCTCACCATGGCCCGCAGCTaGGCCACAAGGCTGCTGCTT | + |
|
Preference number: 4 (lower is better) Translates to: GQWVLGPSEGLQGRARWLTMARS*ATRLLL Trigger: AAGCAGCAGCCTTGTGGCCCAGCTGCGGGCCATGGT...GAGCCATCTAGCCCTCCCCTGTAGCCCCTCACTCGGCCCTAGCACCCACTGGCC 67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000135986.9 |
||
| CDS-3UTR CCA 90 bp | GAAACGCACCAGCCACCAGGCAGGAATGGCTGGCTCCGCCCCTGGCTGGCTCCGTGGCCCAGGGTCTGGTaGTACATGCGGAAGTCCTCC | + |
|
Preference number: 4 (lower is better) Translates to: ETHQPPGRNGWLRPWLAPWPRVW*YMRKSS Trigger: GGAGGACTTCCGCATGTACCACCAGACCCTGGGCCA...CGGAGCCAGCCAGGGGCGGAGCCAGCCATTCCTGCCTGGTGGCTGGTGCGTTTC 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000135986.9 |
||
| CDS-3UTR TCA 90 bp | CCGCCCCTGGCTGGCTCCGCCCCTGCTCAGGTATCCTCAGCTTGCCTGCTCTGCTCCCAGACGCCCCTGTaGAGGCGAATCTGTCCTCTT | + |
|
Preference number: 4 (lower is better) Translates to: PPLAGSAPAQVSSACLLCSQTPL*RRICPL Trigger: AAGAGGACAGATTCGCCTTCACAGGGGCGTCTGGGA...GCAGAGCAGGCAAGCTGAGGATACCTGAGCAGGGGCGGAGCCAGCCAGGGGCGG 66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000135986.9 |
||
| CDS-3UTR GCA 90 bp | AACGCACCAGCCACCAGGCAGGAATGGCTGGCTCCGCCCCTGGCTGGCTCCGCCCGGTGCTGTAGCTCCTaGATGGCCTTGAACTGGAGT | + |
|
Preference number: 4 (lower is better) Translates to: NAPATRQEWLAPPLAGSARCCSS*MALNWS Trigger: ACTCCAGTTCAAGGCCATGCAGGAGCTACAGCACCG...GGCGGAGCCAGCCAGGGGCGGAGCCAGCCATTCCTGCCTGGTGGCTGGTGCGTT 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000135986.9 |
||
| CDS-3UTR GCA 90 bp | TCCGCCCCTGGCTGGCTCCGCCCCTGCTCAGGTATCCTCAGCTTGCCTGCTCTGGCTGCCAGCCTGTCCTaGAGAGCTTTCACCTCTGGG | + |
|
Preference number: 4 (lower is better) Translates to: SAPGWLRPCSGILSLPALAASLS*RAFTSG Trigger: CCCAGAGGTGAAAGCTCTGCAGGACAGGCTGGCAGC...CAGAGCAGGCAAGCTGAGGATACCTGAGCAGGGGCGGAGCCAGCCAGGGGCGGA 66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000135986.9 |
||
| CDS-3UTR GCA 90 bp | GAAACGCACCAGCCACCAGGCAGGAATGGCTGGCTCCGCCCCTGGCTGGCTCCGTTCTCCCAGCTCTCCTaGTTGTCCCTCTCCAGGCTG | + |
|
Preference number: 4 (lower is better) Translates to: ETHQPPGRNGWLRPWLAPFSQLS*LSLSRL Trigger: CAGCCTGGAGAGGGACAAGCAGGAGAGCTGGGAGAA...CGGAGCCAGCCAGGGGCGGAGCCAGCCATTCCTGCCTGGTGGCTGGTGCGTTTC 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000135986.9 |
||
| CDS-3UTR GCA 90 bp | TGGGAACGGAGCCAGGGCTCTGTGCTTGCTGTGACAGCCCTCAGCTGCCTGGGCGGGACACGGTCCCTCTaGCCAGGAAGCCTCCATCCA | + |
|
Preference number: 4 (lower is better) Translates to: WERSQGSVLAVTALSCLGGTRSL*PGSLHP Trigger: TGGATGGAGGCTTCCTGGGCAGAGGGACCGTGTCCC...GCCCAGGCAGCTGAGGGCTGTCACAGCAAGCACAGAGCCCTGGCTCCGTTCCCA 66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000142783.2 |
||
| CDS-3UTR CCA 90 bp | CCGCCCCTGGCTGGCTCCGCCCCTGCTCAGGTATCCTCAGCTTGCCTGCTCTGCGCTCTGTCTCCCGTCTaGGTCTTCAGTGGCTTAGCC | + |
|
Preference number: 4 (lower is better) Translates to: PPLAGSAPAQVSSACLLCALSPV*VFSGLA Trigger: GGCTAAGCCACTGAAGACCCAGACGGGAGACAGAGC...GCAGAGCAGGCAAGCTGAGGATACCTGAGCAGGGGCGGAGCCAGCCAGGGGCGG 66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000135986.9 |
||
| CDS-3UTR GCA 90 bp | CGGAGCCAGGGCTCTGTGCTTGCTGTGACAGCCCTCAGCTGCCTGGGCTGTACCCGCTGGCGCTCTTCCTaGAGTCTCCGCTCAGCTTCT | + |
|
Preference number: 4 (lower is better) Translates to: RSQGSVLAVTALSCLGCTRWRSS*SLRSAS Trigger: AGAAGCTGAGCGGAGACTGCAGGAAGAGCGCCAGCG...GGTACAGCCCAGGCAGCTGAGGGCTGTCACAGCAAGCACAGAGCCCTGGCTCCG 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000142783.2 |
||
| CDS-3UTR CCA 90 bp | GATGGCCAGTGGGTGCTAGGGCCGAGTGAGGGGCTACAGGGGAGGGCTAGATGGCATCAGTGGCCCCCTTaGATGGTGGCTTGGCTGACG | + |
|
Preference number: 4 (lower is better) Translates to: DGQWVLGPSEGLQGRARWHQWPP*MVAWLT Trigger: CGTCAGCCAAGCCACCATCCAAGGGGGCCACTGATG...CCATCTAGCCCTCCCCTGTAGCCCCTCACTCGGCCCTAGCACCCACTGGCCATC 64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000135986.9 |
||
| CDS-3UTR CCA 90 bp | GATGGCCAGTGGGTGCTAGGGCCGAGTGAGGGGCTACAGGGGAGGGCTAGATGGTTGGCCAGAACCTTCTaGGCCACACGGAGCTCCTGC | + |
|
Preference number: 4 (lower is better) Translates to: DGQWVLGPSEGLQGRARWLARTF*ATRSSC Trigger: GCAGGAGCTCCGTGTGGCCCAGAAGGTTCTGGCCAA...CCATCTAGCCCTCCCCTGTAGCCCCTCACTCGGCCCTAGCACCCACTGGCCATC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000135986.9 |
||
| CDS-3UTR CCA 90 bp | AACGCACCAGCCACCAGGCAGGAATGGCTGGCTCCGCCCCTGGCTGGCTCCGCCGATTCCACAAGTGTATaGCCCAGGCTGGTCACAGAG | + |
|
Preference number: 4 (lower is better) Translates to: NAPATRQEWLAPPLAGSADSTSV*PRLVTE Trigger: CTCTGTGACCAGCCTGGGCCATACACTTGTGGAATC...GGCGGAGCCAGCCAGGGGCGGAGCCAGCCATTCCTGCCTGGTGGCTGGTGCGTT 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000135986.9 ENSMUST00000155511.8 |
||
| CDS-3UTR CCA 90 bp | GCACTGGGAACGGAGCCAGGGCTCTGTGCTTGCTGTGACAGCCCTCAGCTGCCTGGGACACCGAGGCCCTaGATGGCTCTAGGCGCATCT | + |
|
Preference number: 4 (lower is better) Translates to: ALGTEPGLCACCDSPQLPGTPRP*MALGAS Trigger: AGATGCGCCTAGAGCCATCCAGGGCCTCGGTGTCCC...AGGCAGCTGAGGGCTGTCACAGCAAGCACAGAGCCCTGGCTCCGTTCCCAGTGC 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000142783.2 |
||
| CDS-3UTR TCA 90 bp | CGCCCCTGGCTGGCTCCGCCCCTGCTCAGGTATCCTCAGCTTGCCTGCTCTGCTGCTCCTGCATGGCCTTaGACTGGAGTCGCAGAGTAT | + |
|
Preference number: 4 (lower is better) Translates to: RPWLAPPLLRYPQLACSAAPAWP*TGVAEY Trigger: ATACTCTGCGACTCCAGTTCAAGGCCATGCAGGAGC...AGCAGAGCAGGCAAGCTGAGGATACCTGAGCAGGGGCGGAGCCAGCCAGGGGCG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000135986.9 |
||
| CDS-3UTR TCA 90 bp | GTGCTAGGGCCGAGTGAGGGGCTACAGGGGAGGGCTAGATGGCTCCAGGTGGATCCAAGCCTGCCAACATaGTCGCCTGCTGAGGCTGGA | + |
|
Preference number: 4 (lower is better) Translates to: VLGPSEGLQGRARWLQVDPSLPT*SPAEAG Trigger: TCCAGCCTCAGCAGGCGATCATGTTGGCAGGCTTGG...ATCCACCTGGAGCCATCTAGCCCTCCCCTGTAGCCCCTCACTCGGCCCTAGCAC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000135986.9 ENSMUST00000155511.8 |
||
| CDS-3UTR CCA 90 bp | GATGGCCAGTGGGTGCTAGGGCCGAGTGAGGGGCTACAGGGGAGGGCTAGATGGGTGTATGGCCCAGGCTaGTCACAGAGCGGGAAGATC | + |
|
Preference number: 4 (lower is better) Translates to: DGQWVLGPSEGLQGRARWVYGPG*SQSGKI Trigger: GATCTTCCCGCTCTGTGACCAGCCTGGGCCATACAC...CCATCTAGCCCTCCCCTGTAGCCCCTCACTCGGCCCTAGCACCCACTGGCCATC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000135986.9 ENSMUST00000155511.8 |
||
| CDS-3UTR CCA 90 bp | CGGAGCCAGGGCTCTGTGCTTGCTGTGACAGCCCTCAGCTGCCTGGGCTGTACCGTGTATGGCCCAGGCTaGTCACAGAGCGGGAAGATC | + |
|
Preference number: 4 (lower is better) Translates to: RSQGSVLAVTALSCLGCTVYGPG*SQSGKI Trigger: GATCTTCCCGCTCTGTGACCAGCCTGGGCCATACAC...GGTACAGCCCAGGCAGCTGAGGGCTGTCACAGCAAGCACAGAGCCCTGGCTCCG 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000142783.2 |
||
| CDS-3UTR CCA 90 bp | ACGGAGCCAGGGCTCTGTGCTTGCTGTGACAGCCCTCAGCTGCCTGGGCTGTACGTCATCGGGGCACTGTaGAACCCTCCACAGGCCAGT | + |
|
Preference number: 4 (lower is better) Translates to: TEPGLCACCDSPQLPGLYVIGAL*NPPQAS Trigger: ACTGGCCTGTGGAGGGTTCCACAGTGCCCCGATGAC...GTACAGCCCAGGCAGCTGAGGGCTGTCACAGCAAGCACAGAGCCCTGGCTCCGT 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000142783.2 |
||
| CDS-3UTR TCA 90 bp | GAGCCCGTAGTAGCATCCCAGGGCCCCAGAGAGGCCCTAGGGCAAGGAAGGACAGCAGGGAAGGCCTCGTaGGAGCAGATTCCACAAGTG | + |
|
Preference number: 4 (lower is better) Translates to: EPVVASQGPREALGQGRTAGKAS*EQIPQV Trigger: CACTTGTGGAATCTGCTCTCACGAGGCCTTCCCTGC...TGTCCTTCCTTGCCCTAGGGCCTCTCTGGGGCCCTGGGATGCTACTACGGGCTC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000135986.9 ENSMUST00000155511.8 |
||
| CDS-3UTR GCA 90 bp | CCCTGGCTGGCTCCGCCCCTGCTCAGGTATCCTCAGCTTGCCTGCTCTGCTACGTCCACCTCAGCAGCCTaGCAGAGGGCCTTCATTTCT | + |
|
Preference number: 4 (lower is better) Translates to: PWLAPPLLRYPQLACSATSTSAA*QRAFIS Trigger: AGAAATGAAGGCCCTCTGGCAGGCTGCTGAGGTGGA...CGTAGCAGAGCAGGCAAGCTGAGGATACCTGAGCAGGGGCGGAGCCAGCCAGGG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000135986.9 ENSMUST00000155511.8 |
||
| CDS-3UTR GCA 90 bp | GGCTGGCTCCGCCCCTGCTCAGGTATCCTCAGCTTGCCTGCTCTGCTACGACACCAGCTTCTAGCAGCTTaGTGCTGCTCTCCTCCACCC | + |
|
Preference number: 4 (lower is better) Translates to: GWLRPCSGILSLPALLRHQLLAA*CCSPPP Trigger: GGGTGGAGGAGAGCAGCAGCAAGCTGCTAGAAGCTG...GTGTCGTAGCAGAGCAGGCAAGCTGAGGATACCTGAGCAGGGGCGGAGCCAGCC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000135986.9 |
||
| CDS-3UTR CCA 90 bp | GATGGCCAGTGGGTGCTAGGGCCGAGTGAGGGGCTACAGGGGAGGGCTAGATGGGACGCCATCTGCAGTTaGTGTTCCAGCTCCTGGATG | + |
|
Preference number: 4 (lower is better) Translates to: DGQWVLGPSEGLQGRARWDAICS*CSSSWM Trigger: CATCCAGGAGCTGGAACACCAACTGCAGATGGCGTC...CCATCTAGCCCTCCCCTGTAGCCCCTCACTCGGCCCTAGCACCCACTGGCCATC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000135986.9 |
||
| CDS-3UTR CCA 90 bp | GATGGCCAGTGGGTGCTAGGGCCGAGTGAGGGGCTACAGGGGAGGGCTAGATGGCGTCTGGGTCTTCAGTaGCTTAGCCCCTGCATCAGT | + |
|
Preference number: 4 (lower is better) Translates to: DGQWVLGPSEGLQGRARWRLGLQ*LSPCIS Trigger: ACTGATGCAGGGGCTAAGCCACTGAAGACCCAGACG...CCATCTAGCCCTCCCCTGTAGCCCCTCACTCGGCCCTAGCACCCACTGGCCATC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000135986.9 |
||
| CDS-3UTR CCA 90 bp | GCTCAGGGAAACGCACCAGCCACCAGGCAGGAATGGCTGGCTCCGCCCCTGGCTGATTCCACAAGTGTATaGCCCAGGCTGGTCACAGAG | + |
|
Preference number: 4 (lower is better) Translates to: AQGNAPATRQEWLAPPLADSTSV*PRLVTE Trigger: CTCTGTGACCAGCCTGGGCCATACACTTGTGGAATC...AGCCAGGGGCGGAGCCAGCCATTCCTGCCTGGTGGCTGGTGCGTTTCCCTGAGC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000135986.9 ENSMUST00000155511.8 |
||
| CDS-3UTR CCA 90 bp | GATGGCCAGTGGGTGCTAGGGCCGAGTGAGGGGCTACAGGGGAGGGCTAGATGGCCAGCCTTTTTGTTCTaGGGAGTCCGAGAACCTGGG | + |
|
Preference number: 4 (lower is better) Translates to: DGQWVLGPSEGLQGRARWPAFLF*GVREPG Trigger: CCCAGGTTCTCGGACTCCCCAGAACAAAAAGGCTGG...CCATCTAGCCCTCCCCTGTAGCCCCTCACTCGGCCCTAGCACCCACTGGCCATC 62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000135986.9 ENSMUST00000155511.8 |
||
| 3UTR CAA 72 bp | CCTGGCTGGCTCCGCCCCTGCTCAGGTATCCTCAGCTaGCCTGCTCTGCTACGACACCAAACCGCTTCTAGG | + |
|
Preference number: 4 (lower is better) Translates to: PGWLRPCSGILS*PALLRHQTASR Trigger: CCTAGAAGCGGTTTGGTGTCGTAGCAGAGCAGGCAAGCTGAGGATACCTGAGCAGGGGCGGAGCCAGCCAGG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000135986.9 ENSMUST00000155511.8 |
||
| CDS-3UTR TCA 90 bp | ACAGGTGTGCACCACCACACCCTTGTACACAGCACTGGGAACGGAGCCAGGGCTCCAAGCCTGCCAACATaGTCGCCTGCTGAGGCTGGA | + |
|
Preference number: 4 (lower is better) Translates to: TGVHHHTLVHSTGNGARAPSLPT*SPAEAG Trigger: TCCAGCCTCAGCAGGCGATCATGTTGGCAGGCTTGG...AGCCCTGGCTCCGTTCCCAGTGCTGTGTACAAGGGTGTGGTGGTGCACACCTGT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000142783.2 |
||
| CDS-3UTR GCA 90 bp | AGGGCTAGATGGCTCCAGGTGGATGAGCCATCAGGAAGCACCGAGGGGCTCATCCTTCAGGTTGGTGGCTaGCAGCCTGTCCTGCAGAGC | + |
|
Preference number: 4 (lower is better) Translates to: RARWLQVDEPSGSTEGLILQVGG*QPVLQS Trigger: GCTCTGCAGGACAGGCTGGCAGCCACCAACCTGAAG...GATGAGCCCCTCGGTGCTTCCTGATGGCTCATCCACCTGGAGCCATCTAGCCCT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000135986.9 |
||
| CDS-3UTR GCA 90 bp | GAAACGCACCAGCCACCAGGCAGGAATGGCTGGCTCCGCCCCTGGCTGGCTCCGTGTTGCGAGACCTCATaGCCTCGAACTTCTTTCTCA | + |
|
Preference number: 4 (lower is better) Translates to: ETHQPPGRNGWLRPWLAPCCETS*PRTSFS Trigger: TGAGAAAGAAGTTCGAGGGCATGAGGTCTCGCAACA...CGGAGCCAGCCAGGGGCGGAGCCAGCCATTCCTGCCTGGTGGCTGGTGCGTTTC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000135986.9 |
||
| CDS-3UTR GCA 90 bp | TGGGTGCTAGGGCCGAGTGAGGGGCTACAGGGGAGGGCTAGATGGCTCCAGGTGTCTGCAGCTTGTGCCTaGCAGCCTTTTTGTTCTGGG | + |
|
Preference number: 4 (lower is better) Translates to: WVLGPSEGLQGRARWLQVSAACA*QPFCSG Trigger: CCCAGAACAAAAAGGCTGGCAGGCACAAGCTGCAGA...CACCTGGAGCCATCTAGCCCTCCCCTGTAGCCCCTCACTCGGCCCTAGCACCCA 61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000135986.9 ENSMUST00000155511.8 |
||
| CDS-3UTR GCA 90 bp | CGGAGCCAGGGCTCTGTGCTTGCTGTGACAGCCCTCAGCTGCCTGGGCTGTACCTCTGCAGCTTGTGCCTaGCAGCCTTTTTGTTCTGGG | + |
|
Preference number: 4 (lower is better) Translates to: RSQGSVLAVTALSCLGCTSAACA*QPFCSG Trigger: CCCAGAACAAAAAGGCTGGCAGGCACAAGCTGCAGA...GGTACAGCCCAGGCAGCTGAGGGCTGTCACAGCAAGCACAGAGCCCTGGCTCCG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000142783.2 |
||
| CDS-3UTR GCA 90 bp | CAACAGCACCTGCTCAGGGAAACGCACCAGCCACCAGGCAGGAATGGCTGGCTCGAGGGCCTTCATTTCTaGAGCTTGTGCCTGCCAGCC | + |
|
Preference number: 4 (lower is better) Translates to: QQHLLRETHQPPGRNGWLEGLHF*SLCLPA Trigger: GGCTGGCAGGCACAAGCTGCAGAAATGAAGGCCCTC...GAGCCAGCCATTCCTGCCTGGTGGCTGGTGCGTTTCCCTGAGCAGGTGCTGTTG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000135986.9 ENSMUST00000155511.8 |
||
| CDS-3UTR CCA 90 bp | CTGGGAACGGAGCCAGGGCTCTGTGCTTGCTGTGACAGCCCTCAGCTGCCTGGGGATTCCACAAGTGTATaGCCCAGGCTGGTCACAGAG | + |
|
Preference number: 4 (lower is better) Translates to: LGTEPGLCACCDSPQLPGDSTSV*PRLVTE Trigger: CTCTGTGACCAGCCTGGGCCATACACTTGTGGAATC...CCCAGGCAGCTGAGGGCTGTCACAGCAAGCACAGAGCCCTGGCTCCGTTCCCAG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000142783.2 |
||
| CDS-3UTR CCA 90 bp | GATGGCCAGTGGGTGCTAGGGCCGAGTGAGGGGCTACAGGGGAGGGCTAGATGGGGCAGCAGGAGGCCCTaGCTTGTTCTTAGTTTTCTG | + |
|
Preference number: 4 (lower is better) Translates to: DGQWVLGPSEGLQGRARWGSRRP*LVLSFL Trigger: CAGAAAACTAAGAACAAGCCAGGGCCTCCTGCTGCC...CCATCTAGCCCTCCCCTGTAGCCCCTCACTCGGCCCTAGCACCCACTGGCCATC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENSMUST00000135986.9 |
||
| CDS-3UTR CCA 90 bp | TGGGAACGGAGCCAGGGCTCTGTGCTTGCTGTGACAGCCCTCAGCTGCCTGGGCGGCAGCAGGAGGCCCTaGCTTGTTCTTAGTTTTCTG | + |
|
Preference number: 4 (lower is better) Translates to: WERSQGSVLAVTALSCLGGSRRP*LVLSFL Trigger: CAGAAAACTAAGAACAAGCCAGGGCCTCCTGCTGCC...GCCCAGGCAGCTGAGGGCTGTCACAGCAAGCACAGAGCCCTGGCTCCGTTCCCA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000142783.2 |
||
| CDS-3UTR TCA 90 bp | CCCCTGGCTGGCTCCGCCCCTGCTCAGGTATCCTCAGCTTGCCTGCTCTGCTACAACATGATCGCCTGCTaGGGCTGGAGAGTTGGTTAT | + |
|
Preference number: 4 (lower is better) Translates to: PLAGSAPAQVSSACLLCYNMIAC*GWRVGY Trigger: ATAACCAACTCTCCAGCCTCAGCAGGCGATCATGTT...GTAGCAGAGCAGGCAAGCTGAGGATACCTGAGCAGGGGCGGAGCCAGCCAGGGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000135986.9 ENSMUST00000155511.8 |
||
| CDS-3UTR TCA 90 bp | CAGGTGGATGAGCCATCAGGAAGCACCGAGGGGCTCATCTATGTGTGGAGAGCCCCAAGCCTGCCAACATaGTCGCCTGCTGAGGCTGGA | + |
|
Preference number: 4 (lower is better) Translates to: QVDEPSGSTEGLIYVWRAPSLPT*SPAEAG Trigger: TCCAGCCTCAGCAGGCGATCATGTTGGCAGGCTTGG...GGCTCTCCACACATAGATGAGCCCCTCGGTGCTTCCTGATGGCTCATCCACCTG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000135986.9 ENSMUST00000155511.8 |
||
| CDS-3UTR TCA 90 bp | ACAGGTGTGCACCACCACACCCTTGTACACAGCACTGGGAACGGAGCCAGGGCTGCAGGGAAGGCCTCGTaGGAGCAGATTCCACAAGTG | + |
|
Preference number: 4 (lower is better) Translates to: TGVHHHTLVHSTGNGARAAGKAS*EQIPQV Trigger: CACTTGTGGAATCTGCTCTCACGAGGCCTTCCCTGC...AGCCCTGGCTCCGTTCCCAGTGCTGTGTACAAGGGTGTGGTGGTGCACACCTGT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000142783.2 |
||
| CDS-3UTR GCA 90 bp | CACCTGCTCAGGGAAACGCACCAGCCACCAGGCAGGAATGGCTGGCTCCGCCCCATGCGATTGGTCAGCTaGTTTATCCTGACCTTTGCG | + |
|
Preference number: 4 (lower is better) Translates to: HLLRETHQPPGRNGWLRPMRLVS*FILTFA Trigger: CGCAAAGGTCAGGATAAAGCAGCTGACCAATCGCAT...GGGGCGGAGCCAGCCATTCCTGCCTGGTGGCTGGTGCGTTTCCCTGAGCAGGTG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000135986.9 |
||
| CDS-3UTR GCA 90 bp | CCCTGGCTGGCTCCGCCCCTGCTCAGGTATCCTCAGCTTGCCTGCTCTGCTACGCAGACTGGATCTGGTTaGGCAGGTCACTCATCTTCA | + |
|
Preference number: 4 (lower is better) Translates to: PWLAPPLLRYPQLACSATQTGSG*AGHSSS Trigger: TGAAGATGAGTGACCTGCGCAACCAGATCCAGTCTG...CGTAGCAGAGCAGGCAAGCTGAGGATACCTGAGCAGGGGCGGAGCCAGCCAGGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000135986.9 |
||
| CDS-3UTR GCA 90 bp | GTGCTAGGGCCGAGTGAGGGGCTACAGGGGAGGGCTAGATGGCTCCAGGTGGATGGTGAGGCCAGCAGCTaGTGGATGTTTACATCTTCC | + |
|
Preference number: 4 (lower is better) Translates to: VLGPSEGLQGRARWLQVDGEASS*WMFTSS Trigger: GGAAGATGTAAACATCCAGCAGCTGCTGGCCTCACC...ATCCACCTGGAGCCATCTAGCCCTCCCCTGTAGCCCCTCACTCGGCCCTAGCAC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000135986.9 |
||
| CDS-3UTR GCA 90 bp | AGGGCAAGGAAGGACAACAGCACCTGCTCAGGGAAACGCACCAGCCACCAGGCAGAGGGCCTTCATTTCTaGAGCTTGTGCCTGCCAGCC | + |
|
Preference number: 4 (lower is better) Translates to: RARKDNSTCSGKRTSHQAEGLHF*SLCLPA Trigger: GGCTGGCAGGCACAAGCTGCAGAAATGAAGGCCCTC...TGCCTGGTGGCTGGTGCGTTTCCCTGAGCAGGTGCTGTTGTCCTTCCTTGCCCT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000135986.9 ENSMUST00000155511.8 |
||
| CDS-3UTR GCA 90 bp | CCACCACACCCTTGTACACAGCACTGGGAACGGAGCCAGGGCTCTGTGCTTGCTGAGGGCCTTCATTTCTaGAGCTTGTGCCTGCCAGCC | + |
|
Preference number: 4 (lower is better) Translates to: PPHPCTQHWERSQGSVLAEGLHF*SLCLPA Trigger: GGCTGGCAGGCACAAGCTGCAGAAATGAAGGCCCTC...AGCAAGCACAGAGCCCTGGCTCCGTTCCCAGTGCTGTGTACAAGGGTGTGGTGG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000142783.2 |
||
| CDS-3UTR GCA 90 bp | TGGCCCAGGGTCTGGTGGTACATGCGGAAGTCCTCCTCCTTCCCTCTCAGGGCATCCACCTCAGCAGCCTaGCAGAGGGCCTTCATTTCT | + |
|
Preference number: 4 (lower is better) Translates to: WPRVWWYMRKSSSFPLRASTSAA*QRAFIS Trigger: AGAAATGAAGGCCCTCTGGCAGGCTGCTGAGGTGGA...TGCCCTGAGAGGGAAGGAGGAGGACTTCCGCATGTACCACCAGACCCTGGGCCA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000155511.8 |
||
| CDS-3UTR GCA 90 bp | TGTGCACCACCACACCCTTGTACACAGCACTGGGAACGGAGCCAGGGCTCTGTGCAGCTTCTAGCAGCTTaGTGCTGCTCTCCTCCACCC | + |
|
Preference number: 4 (lower is better) Translates to: CAPPHPCTQHWERSQGSVQLLAA*CCSPPP Trigger: GGGTGGAGGAGAGCAGCAGCAAGCTGCTAGAAGCTG...CACAGAGCCCTGGCTCCGTTCCCAGTGCTGTGTACAAGGGTGTGGTGGTGCACA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000142783.2 |
||
| CDS-3UTR GCA 90 bp | TCATCTATGTGTGGAGAGCCCGTAGTAGCATCCCAGGGCCCCAGAGAGGCCCTACGCTGGCGCTCTTCCTaGAGTCTCCGCTCAGCTTCT | + |
|
Preference number: 4 (lower is better) Translates to: SSMCGEPVVASQGPREALRWRSS*SLRSAS Trigger: AGAAGCTGAGCGGAGACTGCAGGAAGAGCGCCAGCG...TAGGGCCTCTCTGGGGCCCTGGGATGCTACTACGGGCTCTCCACACATAGATGA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000135986.9 |
||
| CDS-3UTR GCA 90 bp | AGGGCTAGATGGCTCCAGGTGGATGAGCCATCAGGAAGCACCGAGGGGCTCATCGGGTCTGGTGGTACATaGGGAAGTCCTCCTCCTTCC | + |
|
Preference number: 4 (lower is better) Translates to: RARWLQVDEPSGSTEGLIGSGGT*GSPPPS Trigger: GGAAGGAGGAGGACTTCCGCATGTACCACCAGACCC...GATGAGCCCCTCGGTGCTTCCTGATGGCTCATCCACCTGGAGCCATCTAGCCCT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000135986.9 |
||
| CDS-3UTR CCA 90 bp | TCTATGTGTGGAGAGCCCGTAGTAGCATCCCAGGGCCCCAGAGAGGCCCTAGGGCACTCATCTTCAGGTTaGTGGCTGCCAGCCTGTCCT | + |
|
Preference number: 4 (lower is better) Translates to: SMCGEPVVASQGPREALGHSSSG*WLPACP Trigger: AGGACAGGCTGGCAGCCACCAACCTGAAGATGAGTG...CCCTAGGGCCTCTCTGGGGCCCTGGGATGCTACTACGGGCTCTCCACACATAGA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000135986.9 |
||
| CDS-3UTR CCA 90 bp | GTGTGGAGAGCCCGTAGTAGCATCCCAGGGCCCCAGAGAGGCCCTAGGGCAAGGTCACTGTTGACCTTCTaGTCCAGGTGCTGCTGTGAT | + |
|
Preference number: 4 (lower is better) Translates to: VWRARSSIPGPQRGPRARSLLTF*SRCCCD Trigger: ATCACAGCAGCACCTGGACCAGAAGGTCAACAGTGA...CCTTGCCCTAGGGCCTCTCTGGGGCCCTGGGATGCTACTACGGGCTCTCCACAC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000135986.9 |
||
| CDS-3UTR CCA 90 bp | TCCAGGTGGATGAGCCATCAGGAAGCACCGAGGGGCTCATCTATGTGTGGAGAGCACGATCAGCCACCATaGCCCGCAGCTGGGCCACAA | + |
|
Preference number: 4 (lower is better) Translates to: SRWMSHQEAPRGSSMCGEHDQPP*PAAGPQ Trigger: TTGTGGCCCAGCTGCGGGCCATGGTGGCTGATCGTG...CTCTCCACACATAGATGAGCCCCTCGGTGCTTCCTGATGGCTCATCCACCTGGA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000135986.9 |
||
| CDS-3UTR CCA 90 bp | GGCTGGCTCCGCCCCTGCTCAGGTATCCTCAGCTTGCCTGCTCTGCTACGACACTCTCTTCCATCTGGATaGCCAGCCTGGCATTCAGCT | + |
|
Preference number: 4 (lower is better) Translates to: GWLRPCSGILSLPALLRHSLPSG*PAWHSA Trigger: AGCTGAATGCCAGGCTGGCCATCCAGATGGAAGAGA...GTGTCGTAGCAGAGCAGGCAAGCTGAGGATACCTGAGCAGGGGCGGAGCCAGCC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000135986.9 |
||
| CDS-3UTR TCA 90 bp | AGCATCCCAGGGCCCCAGAGAGGCCCTAGGGCAAGGAAGGACAACAGCACCTGCAACATGATCGCCTGCTaGGGCTGGAGAGTTGGTTAT | + |
|
Preference number: 4 (lower is better) Translates to: SIPGPQRGPRARKDNSTCNMIAC*GWRVGY Trigger: ATAACCAACTCTCCAGCCTCAGCAGGCGATCATGTT...GCAGGTGCTGTTGTCCTTCCTTGCCCTAGGGCCTCTCTGGGGCCCTGGGATGCT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000135986.9 ENSMUST00000155511.8 |
||
| CDS-3UTR TCA 90 bp | CCAGGGCGTCCCTCAGTATTCCGTTCTCTTCCATCTGGATGGCCAGCCTGGCATGCAGGGAAGGCCTCGTaGGAGCAGATTCCACAAGTG | + |
|
Preference number: 4 (lower is better) Translates to: PGRPSVFRSLPSGWPAWHAGKAS*EQIPQV Trigger: CACTTGTGGAATCTGCTCTCACGAGGCCTTCCCTGC...ATGCCAGGCTGGCCATCCAGATGGAAGAGAACGGAATACTGAGGGACGCCCTGG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000155511.8 |
||
| CDS-3UTR GCA 90 bp | AGCATCCCAGGGCCCCAGAGAGGCCCTAGGGCAAGGAAGGACAACAGCACCTGCTCTCCCGGAGCTCACTaGGAAGATGCTGGATTTCAT | + |
|
Preference number: 4 (lower is better) Translates to: SIPGPQRGPRARKDNSTCSPGAH*EDAGFH Trigger: ATGAAATCCAGCATCTTCGCAGTGAGCTCCGGGAGA...GCAGGTGCTGTTGTCCTTCCTTGCCCTAGGGCCTCTCTGGGGCCCTGGGATGCT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000135986.9 |
||
| CDS-3UTR GCA 90 bp | AGGGCAAGGAAGGACAACAGCACCTGCTCAGGGAAACGCACCAGCCACCAGGCAATCAGCTCATCGTCATaGCTGCCCTTCTCCACCAGG | + |
|
Preference number: 4 (lower is better) Translates to: RARKDNSTCSGKRTSHQAISSSS*LPFSTR Trigger: CCTGGTGGAGAAGGGCAGGCATGACGATGAGCTGAT...TGCCTGGTGGCTGGTGCGTTTCCCTGAGCAGGTGCTGTTGTCCTTCCTTGCCCT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000135986.9 |
||
| CDS-3UTR GCA 90 bp | TCATCTATGTGTGGAGAGCCCGTAGTAGCATCCCAGGGCCCCAGAGAGGCCCTAATCTCCAGCTCCAGCTaGCGCACCTTGGCTTCACGA | + |
|
Preference number: 4 (lower is better) Translates to: SSMCGEPVVASQGPREALISSSS*RTLASR Trigger: TCGTGAAGCCAAGGTGCGGCAGCTGGAGCTGGAGAT...TAGGGCCTCTCTGGGGCCCTGGGATGCTACTACGGGCTCTCCACACATAGATGA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000135986.9 |
||
| CDS-3UTR CCA 90 bp | AGGGCTAGATGGCTCCAGGTGGATGAGCCATCAGGAAGCACCGAGGGGCTCATCCCAGCCTTTTTGTTCTaGGGAGTCCGAGAACCTGGG | + |
|
Preference number: 4 (lower is better) Translates to: RARWLQVDEPSGSTEGLIPAFLF*GVREPG Trigger: CCCAGGTTCTCGGACTCCCCAGAACAAAAAGGCTGG...GATGAGCCCCTCGGTGCTTCCTGATGGCTCATCCACCTGGAGCCATCTAGCCCT 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000135986.9 ENSMUST00000155511.8 |
||
| CDS-3UTR CCA 90 bp | TGGGAACGGAGCCAGGGCTCTGTGCTTGCTGTGACAGCCCTCAGCTGCCTGGGCCTTACAGGTAACTGCTaGAGAACACAAGAGCACAGC | + |
|
Preference number: 4 (lower is better) Translates to: WERSQGSVLAVTALSCLGLTGNC*RTQEHS Trigger: GCTGTGCTCTTGTGTTCTCCAGCAGTTACCTGTAAG...GCCCAGGCAGCTGAGGGCTGTCACAGCAAGCACAGAGCCCTGGCTCCGTTCCCA 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000142783.2 |
||
| CDS-3UTR TCA 90 bp | CAGGTGGATGAGCCATCAGGAAGCACCGAGGGGCTCATCTATGTGTGGAGAGCCTCCTTGAGTCTGAACTaGGAGGCACCTCAGAGCTCG | + |
|
Preference number: 4 (lower is better) Translates to: QVDEPSGSTEGLIYVWRASLSLN*EAPQSS Trigger: CGAGCTCTGAGGTGCCTCTCAGTTCAGACTCAAGGA...GGCTCTCCACACATAGATGAGCCCCTCGGTGCTTCCTGATGGCTCATCCACCTG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000135986.9 |
||
| CDS-3UTR TCA 90 bp | GATGGCTCCAGGTGGATGAGCCATCAGGAAGCACCGAGGGGCTCATCTATGTGTGTTGGGCCTCACTGTTaGCCTTCTGGTCCAGGTGCT | + |
|
Preference number: 4 (lower is better) Translates to: DGSRWMSHQEAPRGSSMCVGPHC*PSGPGA Trigger: AGCACCTGGACCAGAAGGTCAACAGTGAGGCCCAAC...ACACATAGATGAGCCCCTCGGTGCTTCCTGATGGCTCATCCACCTGGAGCCATC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000135986.9 |
||
| CDS-3UTR GCA 90 bp | AGCTTGCCTGCTCTGCTACGACACCAAACCGCTTCTAGGAGGAGCCGAGTGAGCACGGAGCTCCTGCTTTaGAGACTGGATCTGGTTGCG | + |
|
Preference number: 4 (lower is better) Translates to: SLPALLRHQTASRRSRVSTELLL*RLDLVA Trigger: CGCAACCAGATCCAGTCTGCAAAGCAGGAGCTCCGT...GCTCACTCGGCTCCTCCTAGAAGCGGTTTGGTGTCGTAGCAGAGCAGGCAAGCT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000135986.9 |
||
| CDS-3UTR GCA 90 bp | AGCTTGCCTGCTCTGCTACGACACCAAACCGCTTCTAGGAGGAGCCGAGTGAGCTGGACAGCACCTTGTTaGGAGACCTCATGCCCTCGA | + |
|
Preference number: 4 (lower is better) Translates to: SLPALLRHQTASRRSRVSWTAPC*ETSCPR Trigger: TCGAGGGCATGAGGTCTCGCAACAAGGTGCTGTCCA...GCTCACTCGGCTCCTCCTAGAAGCGGTTTGGTGTCGTAGCAGAGCAGGCAAGCT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000135986.9 |
||
| CDS-3UTR GCA 90 bp | GCTAGATGGCTCCAGGTGGATGAGCCATCAGGAAGCACCGAGGGGCTCATCTATGCTCATCGTCATGCCTaGCCTTCTCCACCAGGGTTG | + |
|
Preference number: 4 (lower is better) Translates to: ARWLQVDEPSGSTEGLIYAHRHA*PSPPGL Trigger: CAACCCTGGTGGAGAAGGGCAGGCATGACGATGAGC...ATAGATGAGCCCCTCGGTGCTTCCTGATGGCTCATCCACCTGGAGCCATCTAGC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000135986.9 |
||
| CDS-3UTR GCA 90 bp | TGGCTCCGCCCCTGCTCAGGTATCCTCAGCTTGCCTGCTCTGCTACGACACCAATCTGCAGCTTGTGCCTaGCAGCCTTTTTGTTCTGGG | + |
|
Preference number: 4 (lower is better) Translates to: WLRPCSGILSLPALLRHQSAACA*QPFCSG Trigger: CCCAGAACAAAAAGGCTGGCAGGCACAAGCTGCAGA...TTGGTGTCGTAGCAGAGCAGGCAAGCTGAGGATACCTGAGCAGGGGCGGAGCCA 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000135986.9 ENSMUST00000155511.8 |
||
| CDS-3UTR GCA 90 bp | CCAGGCTGGACTCCAGCTCCATTTGCAGCCAAGGGTGAGCTTGAACTGACTGCCTCCACCTCAGCAGCCTaGCAGAGGGCCTTCATTTCT | + |
|
Preference number: 4 (lower is better) Translates to: PGWTPAPFAAKGELELTASTSAA*QRAFIS Trigger: AGAAATGAAGGCCCTCTGGCAGGCTGCTGAGGTGGA...GGCAGTCAGTTCAAGCTCACCCTTGGCTGCAAATGGAGCTGGAGTCCAGCCTGG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000142783.2 |
||
| CDS-3UTR CCA 90 bp | AGGGCAAGGAAGGACAACAGCACCTGCTCAGGGAAACGCACCAGCCACCAGGCACAGAGCTTTCACCTCTaGGGTCTCCAGCAAAGCTCT | + |
|
Preference number: 4 (lower is better) Translates to: RARKDNSTCSGKRTSHQAQSFHL*GLQQSS Trigger: AGAGCTTTGCTGGAGACCCCAGAGGTGAAAGCTCTG...TGCCTGGTGGCTGGTGCGTTTCCCTGAGCAGGTGCTGTTGTCCTTCCTTGCCCT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000135986.9 |
||
| CDS-3UTR CCA 90 bp | AGCTTGCCTGCTCTGCTACGACACCAAACCGCTTCTAGGAGGAGCCGAGTGAGCTCATCTTCAGGTTGGTaGCTGCCAGCCTGTCCTGCA | + |
|
Preference number: 4 (lower is better) Translates to: SLPALLRHQTASRRSRVSSSSGW*LPACPA Trigger: TGCAGGACAGGCTGGCAGCCACCAACCTGAAGATGA...GCTCACTCGGCTCCTCCTAGAAGCGGTTTGGTGTCGTAGCAGAGCAGGCAAGCT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000135986.9 |
||
| CDS-3UTR CCA 90 bp | TGCTTGTTGGCTTTCTGCTGCCGTAGTGCCTGCAGGAAGACCCCTTTCACCTGGGTGTATGGCCCAGGCTaGTCACAGAGCGGGAAGATC | + |
|
Preference number: 4 (lower is better) Translates to: CLLAFCCRSACRKTPFTWVYGPG*SQSGKI Trigger: GATCTTCCCGCTCTGTGACCAGCCTGGGCCATACAC...CCAGGTGAAAGGGGTCTTCCTGCAGGCACTACGGCAGCAGAAAGCCAACAAGCA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000155511.8 |
||
| CDS-3UTR CCA 90 bp | CCAGGCTGGACTCCAGCTCCATTTGCAGCCAAGGGTGAGCTTGAACTGACTGCCCCAGCCTTTTTGTTCTaGGGAGTCCGAGAACCTGGG | + |
|
Preference number: 4 (lower is better) Translates to: PGWTPAPFAAKGELELTAPAFLF*GVREPG Trigger: CCCAGGTTCTCGGACTCCCCAGAACAAAAAGGCTGG...GGCAGTCAGTTCAAGCTCACCCTTGGCTGCAAATGGAGCTGGAGTCCAGCCTGG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000142783.2 |
||
| CDS-3UTR TCA 90 bp | TTACAGGTGTGCACCACCACACCCTTGTACACAGCACTGGGAACGGAGCCAGGGGAGCTGTGTGGAGGATaGGTCTTTCTTGGCACTTCC | + |
|
Preference number: 4 (lower is better) Translates to: LQVCTTTPLYTALGTEPGELCGG*VFLGTS Trigger: GGAAGTGCCAAGAAAGACTCATCCTCCACACAGCTC...CCCTGGCTCCGTTCCCAGTGCTGTGTACAAGGGTGTGGTGGTGCACACCTGTAA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000142783.2 |
||
| CDS-3UTR GCA 90 bp | CAACAGCACCTGCTCAGGGAAACGCACCAGCCACCAGGCAGGAATGGCTGGCTCCAAGATCTCGGACCCTaGTCTGCAGCACTAGAATTT | + |
|
Preference number: 4 (lower is better) Translates to: QQHLLRETHQPPGRNGWLQDLGP*SAALEF Trigger: AAATTCTAGTGCTGCAGAGCAGGGTCCGAGATCTTG...GAGCCAGCCATTCCTGCCTGGTGGCTGGTGCGTTTCCCTGAGCAGGTGCTGTTG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000135986.9 |
||
| CDS-3UTR CCA 90 bp | TTGCCTGCTCTGCTACGACACCAAACCGCTTCTAGGAGGAGCCGAGTGAGCGCTGAGGCCAGCAGCTGCTaGATGTTTACATCTTCCCCA | + |
|
Preference number: 4 (lower is better) Translates to: LPALLRHQTASRRSRVSAEASSC*MFTSSP Trigger: TGGGGAAGATGTAAACATCCAGCAGCTGCTGGCCTC...AGCGCTCACTCGGCTCCTCCTAGAAGCGGTTTGGTGTCGTAGCAGAGCAGGCAA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000135986.9 |
||
| CDS-3UTR CCA 90 bp | TGGATGAGCCATCAGGAAGCACCGAGGGGCTCATCTATGTGTGGAGAGCCCGTAACCAGGGTTGTCATCTaGCTCCTGAGGGTCTTCACC | + |
|
Preference number: 4 (lower is better) Translates to: WMSHQEAPRGSSMCGEPVTRVVI*LLRVFT Trigger: GGTGAAGACCCTCAGGAGCCAGATGACAACCCTGGT...TACGGGCTCTCCACACATAGATGAGCCCCTCGGTGCTTCCTGATGGCTCATCCA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000135986.9 |
||
| CDS-3UTR CCA 90 bp | GGCCCTAGGGCAAGGAAGGACAACAGCACCTGCTCAGGGAAACGCACCAGCCACTATCGCAGAGCTGTGTaGAGGATGAGTCTTTCTTGG | + |
|
Preference number: 4 (lower is better) Translates to: GPRARKDNSTCSGKRTSHYRRAV*RMSLSW Trigger: CCAAGAAAGACTCATCCTCCACACAGCTCTGCGATA...GTGGCTGGTGCGTTTCCCTGAGCAGGTGCTGTTGTCCTTCCTTGCCCTAGGGCC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000135986.9 |
||
| CDS-3UTR CCA 90 bp | TTGCCTGCTCTGCTACGACACCAAACCGCTTCTAGGAGGAGCCGAGTGAGCGCTTCTGGATGGCCAGCCTaGCATTCAGCTCCTGTATCT | + |
|
Preference number: 4 (lower is better) Translates to: LPALLRHQTASRRSRVSASGWPA*HSAPVS Trigger: AGATACAGGAGCTGAATGCCAGGCTGGCCATCCAGA...AGCGCTCACTCGGCTCCTCCTAGAAGCGGTTTGGTGTCGTAGCAGAGCAGGCAA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000135986.9 |
||
| CDS-3UTR TCA 90 bp | CTCCAGGTGGATGAGCCATCAGGAAGCACCGAGGGGCTCATCTATGTGTGGAGAGAGCTGTGTGGAGGATaGGTCTTTCTTGGCACTTCC | + |
|
Preference number: 4 (lower is better) Translates to: LQVDEPSGSTEGLIYVWRELCGG*VFLGTS Trigger: GGAAGTGCCAAGAAAGACTCATCCTCCACACAGCTC...TCTCCACACATAGATGAGCCCCTCGGTGCTTCCTGATGGCTCATCCACCTGGAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000135986.9 |
||
| CDS-3UTR GCA 90 bp | CACCACCACACCCTTGTACACAGCACTGGGAACGGAGCCAGGGCTCTGTGCTTGCTCCTTACAGGTAACTaGTGGAGAACACAAGAGCAC | + |
|
Preference number: 4 (lower is better) Translates to: HHHTLVHSTGNGARALCLLLTGN*WRTQEH Trigger: GTGCTCTTGTGTTCTCCAGCAGTTACCTGTAAGGAG...CAAGCACAGAGCCCTGGCTCCGTTCCCAGTGCTGTGTACAAGGGTGTGGTGGTG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000142783.2 |
||
| CDS-3UTR CCA 90 bp | GACTTGTTATTTCAAGCTCAGGGCTCTGCCCTGTGCAGTAAGTACACAGAGAGGGGGACACCGAGGCCCTaGATGGCTCTAGGCGCATCT | + |
|
Preference number: 4 (lower is better) Translates to: DLLFQAQGSALCSKYTERGTPRP*MALGAS Trigger: AGATGCGCCTAGAGCCATCCAGGGCCTCGGTGTCCC...CCTCTCTGTGTACTTACTGCACAGGGCAGAGCCCTGAGCTTGAAATAACAAGTC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000135986.9 |
||
| CDS-3UTR CCA 90 bp | TACAGGTGTGCACCACCACACCCTTGTACACAGCACTGGGAACGGAGCCAGGGCTATCGCAGAGCTGTGTaGAGGATGAGTCTTTCTTGG | + |
|
Preference number: 4 (lower is better) Translates to: YRCAPPHPCTQHWERSQGYRRAV*RMSLSW Trigger: CCAAGAAAGACTCATCCTCCACACAGCTCTGCGATA...GCCCTGGCTCCGTTCCCAGTGCTGTGTACAAGGGTGTGGTGGTGCACACCTGTA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000142783.2 |
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| CDS-3UTR CCA 90 bp | CTCATCTATGTGTGGAGAGCCCGTAGTAGCATCCCAGGGCCCCAGAGAGGCCCTTCACTGCGAAGATGCTaGATTTCATCTTCCAACACC | + |
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Preference number: 4 (lower is better) Translates to: LIYVWRARSSIPGPQRGPSLRRC*ISSSNT Trigger: GGTGTTGGAAGATGAAATCCAGCATCTTCGCAGTGA...AGGGCCTCTCTGGGGCCCTGGGATGCTACTACGGGCTCTCCACACATAGATGAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000135986.9 |
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| CDS-3UTR CCA 90 bp | AGATGGCTCCAGGTGGATGAGCCATCAGGAAGCACCGAGGGGCTCATCTATGTGTTTGCAGACTGGATCTaGTTGCGCAGGTCACTCATC | + |
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Preference number: 4 (lower is better) Translates to: RWLQVDEPSGSTEGLIYVFADWI*LRRSLI Trigger: GATGAGTGACCTGCGCAACCAGATCCAGTCTGCAAA...CACATAGATGAGCCCCTCGGTGCTTCCTGATGGCTCATCCACCTGGAGCCATCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000135986.9 |
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| CDS-3UTR CCA 90 bp | TTCCCAGGCTGGACTCCAGCTCCATTTGCAGCCAAGGGTGAGCTTGAACTGACTTGGGCAGGAAGCACCTaGCATTCAGCTCCTGTATCT | + |
|
Preference number: 4 (lower is better) Translates to: FPGWTPAPFAAKGELELTWAGST*HSAPVS Trigger: AGATACAGGAGCTGAATGCCAGGTGCTTCCTGCCCA...AGTCAGTTCAAGCTCACCCTTGGCTGCAAATGGAGCTGGAGTCCAGCCTGGGAA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000142783.2 |
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| 3UTR CAA 72 bp | CCAGGAGTTGAGCTAACAGCTGTGTTCTACTGCTTGTaGGCTTTCTGCTGCCGTAGTGCCTGCAGGAAGACC | + |
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Preference number: 4 (lower is better) Translates to: PGVELTAVFYCL*AFCCRSACRKT Trigger: GGTCTTCCTGCAGGCACTACGGCAGCAGAAAGCCAACAAGCAGTAGAACACAGCTGTTAGCTCAACTCCTGG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000155511.8 |
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| 3UTR CAA 72 bp | CCTCCAGGAGTTGAGCTAACAGCTGTGTTCTACTGCTaGTTGGCTTTCTGCTGCCGTAGTGCCTGCAGGAAG | + |
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Preference number: 4 (lower is better) Translates to: PPGVELTAVFYC*LAFCCRSACRK Trigger: CTTCCTGCAGGCACTACGGCAGCAGAAAGCCAACAAGCAGTAGAACACAGCTGTTAGCTCAACTCCTGGAGG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000155511.8 |
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| CDS-3UTR TCA 90 bp | AGATGGCTCCAGGTGGATGAGCCATCAGGAAGCACCGAGGGGCTCATCTATGTGTTGTCAGCTTTGCTTTaGCAGCTCAGCTCTTTCTCC | + |
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Preference number: 4 (lower is better) Translates to: RWLQVDEPSGSTEGLIYVLSALL*QLSSFS Trigger: GGAGAAAGAGCTGAGCTGTCAAAGCAAAGCTGACAA...CACATAGATGAGCCCCTCGGTGCTTCCTGATGGCTCATCCACCTGGAGCCATCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000135986.9 |
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| CDS-3UTR CAA 90 bp | CTGCTCAGGGAAACGCACCAGCCACCAGGCAGGAATGGCTGGCTCCGCCCCTGGTCCCAGCTCTCCTGCTaGTCCCTCTCCAGGCTGCGG | + |
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Preference number: 5 (lower is better) Translates to: LLRETHQPPGRNGWLRPWSQLSC*SLSRLR Trigger: CCGCAGCCTGGAGAGGGACAAGCAGGAGAGCTGGGA...CCAGGGGCGGAGCCAGCCATTCCTGCCTGGTGGCTGGTGCGTTTCCCTGAGCAG 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000135986.9 |
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| CDS-3UTR CAA 90 bp | CGCCCCTGGCTGGCTCCGCCCCTGCTCAGGTATCCTCAGCTTGCCTGCTCTGCTGCATCAGTGGCCCCCTaGGATGGTGGCTTGGCTGAC | + |
|
Preference number: 5 (lower is better) Translates to: RPWLAPPLLRYPQLACSAASVAP*DGGLAD Trigger: GTCAGCCAAGCCACCATCCAAGGGGGCCACTGATGC...AGCAGAGCAGGCAAGCTGAGGATACCTGAGCAGGGGCGGAGCCAGCCAGGGGCG 67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000135986.9 |
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| CDS CCA 90 bp | TCTCCAGCTCCAGCTGCCGCACCTTGGCTTCACGATCAGCCACCATaGCCCGCAGCTGGGCCACAAGGCTGCTGCTTCGTTGGGCCTCAC | + |
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Preference number: 5 (lower is better) Translates to: SPAPAAAPWLHDQPP*PAAGPQGCCFVGPH Trigger: GTGAGGCCCAACGAAGCAGCAGCCTTGTGGCCCAGCTGCGGGCCATGGTGGCTGATCGTGAAGCCAAGGTGCGGCAGCTGGAGCTGGAGA 66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000135986.9 |
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| CDS-3UTR CAA 90 bp | CACCTGCTCAGGGAAACGCACCAGCCACCAGGCAGGAATGGCTGGCTCCGCCCCCACGGAGCTCCTGCTTaGCAGACTGGATCTGGTTGC | + |
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Preference number: 5 (lower is better) Translates to: HLLRETHQPPGRNGWLRPHGAPA*QTGSGC Trigger: GCAACCAGATCCAGTCTGCAAAGCAGGAGCTCCGTG...GGGGCGGAGCCAGCCATTCCTGCCTGGTGGCTGGTGCGTTTCCCTGAGCAGGTG 64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000135986.9 |
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| CDS-3UTR CAA 90 bp | CCCTGGCTGGCTCCGCCCCTGCTCAGGTATCCTCAGCTTGCCTGCTCTGCTACGCGTTGGGCCTCACTGTaGACCTTCTGGTCCAGGTGC | + |
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Preference number: 5 (lower is better) Translates to: PWLAPPLLRYPQLACSATRWASL*TFWSRC Trigger: GCACCTGGACCAGAAGGTCAACAGTGAGGCCCAACG...CGTAGCAGAGCAGGCAAGCTGAGGATACCTGAGCAGGGGCGGAGCCAGCCAGGG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000135986.9 |
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| CDS-3UTR CAA 90 bp | GTGCTAGGGCCGAGTGAGGGGCTACAGGGGAGGGCTAGATGGCTCCAGGTGGATTCCAGCTGCCGCACCTaGGCTTCACGATCAGCCACC | + |
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Preference number: 5 (lower is better) Translates to: VLGPSEGLQGRARWLQVDSSCRT*ASRSAT Trigger: GGTGGCTGATCGTGAAGCCAAGGTGCGGCAGCTGGA...ATCCACCTGGAGCCATCTAGCCCTCCCCTGTAGCCCCTCACTCGGCCCTAGCAC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000135986.9 |
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| CDS-3UTR CAA 90 bp | GGCTGGCTCCGCCCCTGCTCAGGTATCCTCAGCTTGCCTGCTCTGCTACGACACCCCTTGGATGGTGGCTaGGCTGACGCCATCTGCAGT | + |
|
Preference number: 5 (lower is better) Translates to: GWLRPCSGILSLPALLRHPLDGG*ADAICS Trigger: ACTGCAGATGGCGTCAGCCAAGCCACCATCCAAGGG...GTGTCGTAGCAGAGCAGGCAAGCTGAGGATACCTGAGCAGGGGCGGAGCCAGCC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000135986.9 |
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| CDS-3UTR CAA 90 bp | GTGTGGAGAGCCCGTAGTAGCATCCCAGGGCCCCAGAGAGGCCCTAGGGCAAGGACAGTGACAAACTCATaGAGCCGGTCCCGCTCCACC | + |
|
Preference number: 5 (lower is better) Translates to: VWRARSSIPGPQRGPRARTVTNS*SRSRST Trigger: GGTGGAGCGGGACCGGCTCAATGAGTTTGTCACTGT...CCTTGCCCTAGGGCCTCTCTGGGGCCCTGGGATGCTACTACGGGCTCTCCACAC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000135986.9 ENSMUST00000155511.8 |
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| CDS-3UTR CAA 90 bp | ACAGCACTGGGAACGGAGCCAGGGCTCTGTGCTTGCTGTGACAGCCCTCAGCTGGAGTTAGGCTTGGTGTaGGCAGCAGGAGGCCCTGGC | + |
|
Preference number: 5 (lower is better) Translates to: TALGTEPGLCACCDSPQLELGLV*AAGGPG Trigger: GCCAGGGCCTCCTGCTGCCAACACCAAGCCTAACTC...CAGCTGAGGGCTGTCACAGCAAGCACAGAGCCCTGGCTCCGTTCCCAGTGCTGT 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000142783.2 |
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| CDS-3UTR CAA 90 bp | GGCTGGCTCCGCCCCTGCTCAGGTATCCTCAGCTTGCCTGCTCTGCTACGACACCCAGCTGAGTTAGGCTaGGTGTTGGCAGCAGGAGGC | + |
|
Preference number: 5 (lower is better) Translates to: GWLRPCSGILSLPALLRHPAELG*VLAAGG Trigger: GCCTCCTGCTGCCAACACCAAGCCTAACTCAGCTGG...GTGTCGTAGCAGAGCAGGCAAGCTGAGGATACCTGAGCAGGGGCGGAGCCAGCC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000135986.9 |
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| CDS GCA 90 bp | TGGGACACCGAGGCCCTGGATGGCTCTAGGCGCATCTTCTCCAGGTaGTGTTCCAACAGCACAGCTCGCTGGCGCTCTTCCTGCAGTCTC | + |
|
Preference number: 5 (lower is better) Translates to: WDTEALDGSRRIFSR*CSNSTARWRSSCSL Trigger: GAGACTGCAGGAAGAGCGCCAGCGAGCTGTGCTGTTGGAACAGCACCTGGAGAAGATGCGCCTAGAGCCATCCAGGGCCTCGGTGTCCCA 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000135986.9 ENSMUST00000142783.2 |
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| CDS CCA 90 bp | TCAGCCACCATGGCCCGCAGCTGGGCCACAAGGCTGCTGCTTCGTTaGGCCTCACTGTTGACCTTCTGGTCCAGGTGCTGCTGTGATGTG | + |
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Preference number: 5 (lower is better) Translates to: SATMARSWATRLLLR*ASLLTFWSRCCCDV Trigger: CACATCACAGCAGCACCTGGACCAGAAGGTCAACAGTGAGGCCCAACGAAGCAGCAGCCTTGTGGCCCAGCTGCGGGCCATGGTGGCTGA 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000135986.9 |
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| CDS-3UTR CAA 90 bp | CGCCCCTGGCTGGCTCCGCCCCTGCTCAGGTATCCTCAGCTTGCCTGCTCTGCTAGCTCCTGGATGCGATaGGTCAGCTGCTTTATCCTG | + |
|
Preference number: 5 (lower is better) Translates to: RPWLAPPLLRYPQLACSASSWMR*VSCFIL Trigger: CAGGATAAAGCAGCTGACCAATCGCATCCAGGAGCT...AGCAGAGCAGGCAAGCTGAGGATACCTGAGCAGGGGCGGAGCCAGCCAGGGGCG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000135986.9 |
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| CDS-3UTR CAA 90 bp | GAGCCCGTAGTAGCATCCCAGGGCCCCAGAGAGGCCCTAGGGCAAGGAAGGACATCACTCATCTTCAGGTaGGTGGCTGCCAGCCTGTCC | + |
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Preference number: 5 (lower is better) Translates to: EPVVASQGPREALGQGRTSLIFR*VAASLS Trigger: GGACAGGCTGGCAGCCACCAACCTGAAGATGAGTGA...TGTCCTTCCTTGCCCTAGGGCCTCTCTGGGGCCCTGGGATGCTACTACGGGCTC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000135986.9 |
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| CDS-3UTR CAA 90 bp | TGGGAACGGAGCCAGGGCTCTGTGCTTGCTGTGACAGCCCTCAGCTGCCTGGGCGCAGGAGGCCCTGGCTaGTTCTTAGTTTTCTGGGAC | + |
|
Preference number: 5 (lower is better) Translates to: WERSQGSVLAVTALSCLGAGGPG*FLVFWD Trigger: GTCCCAGAAAACTAAGAACAAGCCAGGGCCTCCTGC...GCCCAGGCAGCTGAGGGCTGTCACAGCAAGCACAGAGCCCTGGCTCCGTTCCCA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000142783.2 |
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| CDS-3UTR CAA 90 bp | CAGGTGTGCACCACCACACCCTTGTACACAGCACTGGGAACGGAGCCAGGGCTCCCAGCTGAGTTAGGCTaGGTGTTGGCAGCAGGAGGC | + |
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Preference number: 5 (lower is better) Translates to: QVCTTTPLYTALGTEPGLPAELG*VLAAGG Trigger: GCCTCCTGCTGCCAACACCAAGCCTAACTCAGCTGG...GAGCCCTGGCTCCGTTCCCAGTGCTGTGTACAAGGGTGTGGTGGTGCACACCTG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000142783.2 |
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| CDS TCA 90 bp | CCCGCAGCTGGGCCACAAGGCTGCTGCTTCGTTGGGCCTCACTGTTaGCCTTCTGGTCCAGGTGCTGCTGTGATGTGCGTCTCGATTCCT | + |
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Preference number: 5 (lower is better) Translates to: PAAGPQGCCFVGPHC*PSGPGAAVMCVSIP Trigger: AGGAATCGAGACGCACATCACAGCAGCACCTGGACCAGAAGGTCAACAGTGAGGCCCAACGAAGCAGCAGCCTTGTGGCCCAGCTGCGGG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000135986.9 |
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| CDS TCA 90 bp | GGCTGGCCCCCTCACCCCCTCCTTTACCGTGAAGATACTGGACACTaGGTTGCCCAATCTCCAGCTCCAGCTGCCGCACCTTGGCTTCAC | + |
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Preference number: 5 (lower is better) Translates to: GWPPHPLLYREDTGH*VAQSPAPAAAPWLH Trigger: GTGAAGCCAAGGTGCGGCAGCTGGAGCTGGAGATTGGGCAACTCAGTGTCCAGTATCTTCACGGTAAAGGAGGGGGTGAGGGGGCCAGCC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000135986.9 |
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| CDS TCA 90 bp | TGGCCCAGGCTGGTCACAGAGCGGGAAGATCCAAGCCTGCCAACATaGTCGCCTGCTGAGGCTGGAGAGTTGGTTATCGGGGTCTGGTCC | + |
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Preference number: 5 (lower is better) Translates to: WPRLVTEREDPSLPT*SPAEAGELVIGVWS Trigger: GGACCAGACCCCGATAACCAACTCTCCAGCCTCAGCAGGCGATCATGTTGGCAGGCTTGGATCTTCCCGCTCTGTGACCAGCCTGGGCCA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000135986.9 ENSMUST00000155511.8 |
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| CDS GCA 90 bp | GTCTGGAGGGTGTCCCGCTCGCTGGCCAGTTTCTCCCAGCTCTCCTaGTTGTCCCTCTCCAGGCTGCGGATCCTCAGTAGGTTTTTCTCC | + |
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Preference number: 5 (lower is better) Translates to: VWRVSRSLASFSQLS*LSLSRLRILSRFFS Trigger: GGAGAAAAACCTACTGAGGATCCGCAGCCTGGAGAGGGACAAGCAGGAGAGCTGGGAGAAACTGGCCAGCGAGCGGGACACCCTCCAGAC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000135986.9 |
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| CDS GCA 90 bp | CCAGTCCTAGCACAAGCATCCTTCCCGGCAAGTAGAGGTCCTGAGTaGAAGGGAGAGGGACACGGTCCCTCTGCCCAGGAAGCCTCCATC | + |
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Preference number: 5 (lower is better) Translates to: PVLAQASFPASRGPE*KGEGHGPSAQEASI Trigger: GATGGAGGCTTCCTGGGCAGAGGGACCGTGTCCCTCTCCCTTGCACTCAGGACCTCTACTTGCCGGGAAGGATGCTTGTGCTAGGACTGG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000142783.2 |
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| CDS CCA 90 bp | AAGATCCAAGCCTGCCAACATGATCGCCTGCTGAGGCTGGAGAGTTaGTTATCGGGGTCTGGTCCTCAGGGAACCTGGCATCGGCGGGGC | + |
|
Preference number: 5 (lower is better) Translates to: KIQACQHDRLLRLES*LSGSGPQGTWHRRG Trigger: GCCCCGCCGATGCCAGGTTCCCTGAGGACCAGACCCCGATAACCAACTCTCCAGCCTCAGCAGGCGATCATGTTGGCAGGCTTGGATCTT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000135986.9 |
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| CDS-3UTR CAA 90 bp | TGGCTCCGCCCCTGCTCAGGTATCCTCAGCTTGCCTGCTCTGCTACGACACCAATCGCTGGACAGCACCTaGTTGCGAGACCTCATGCCC | + |
|
Preference number: 5 (lower is better) Translates to: WLRPCSGILSLPALLRHQSLDST*LRDLMP Trigger: GGGCATGAGGTCTCGCAACAAGGTGCTGTCCAGCGA...TTGGTGTCGTAGCAGAGCAGGCAAGCTGAGGATACCTGAGCAGGGGCGGAGCCA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000135986.9 |
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| CDS-3UTR CAA 90 bp | ACAGCACTGGGAACGGAGCCAGGGCTCTGTGCTTGCTGTGACAGCCCTCAGCTGACAGTGACAAACTCATaGAGCCGGTCCCGCTCCACC | + |
|
Preference number: 5 (lower is better) Translates to: TALGTEPGLCACCDSPQLTVTNS*SRSRST Trigger: GGTGGAGCGGGACCGGCTCAATGAGTTTGTCACTGT...CAGCTGAGGGCTGTCACAGCAAGCACAGAGCCCTGGCTCCGTTCCCAGTGCTGT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000142783.2 |
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| CDS GCA 90 bp | CTCCACCTCAGCAGCCTGCCAGAGGGCCTTCATTTCTGCAGCTTGTaGCTGCCAGCCTTTTTGTTCTGGGGAGTCCGAGAACCTGGGCGA | + |
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Preference number: 5 (lower is better) Translates to: LHLSSLPEGLHFCSL*LPAFLFWGVREPGR Trigger: TCGCCCAGGTTCTCGGACTCCCCAGAACAAAAAGGCTGGCAGGCACAAGCTGCAGAAATGAAGGCCCTCTGGCAGGCTGCTGAGGTGGAG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000135986.9 ENSMUST00000142783.2 ENSMUST00000155511.8 |
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| CDS GCA 90 bp | TTCTCCAGGTGCTGTTCCAACAGCACAGCTCGCTGGCGCTCTTCCTaGAGTCTCCGCTCAGCTTCTAGCAGCTTGCTGCTGCTCTCCTCC | + |
|
Preference number: 5 (lower is better) Translates to: FSRCCSNSTARWRSS*SLRSASSSLLLLSS Trigger: GGAGGAGAGCAGCAGCAAGCTGCTAGAAGCTGAGCGGAGACTGCAGGAAGAGCGCCAGCGAGCTGTGCTGTTGGAACAGCACCTGGAGAA 60% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000135986.9 ENSMUST00000142783.2 |
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| CDS CCA 90 bp | GGCTTGGTGTTGGCAGCAGGAGGCCCTGGCTTGTTCTTAGTTTTCTaGGACACCGAGGCCCTGGATGGCTCTAGGCGCATCTTCTCCAGG | + |
|
Preference number: 5 (lower is better) Translates to: GLVLAAGGPGLFLVF*DTEALDGSRRIFSR Trigger: CCTGGAGAAGATGCGCCTAGAGCCATCCAGGGCCTCGGTGTCCCAGAAAACTAAGAACAAGCCAGGGCCTCCTGCTGCCAACACCAAGCC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000135986.9 ENSMUST00000142783.2 |
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| CDS-3UTR CAA 90 bp | CGTAGTAGCATCCCAGGGCCCCAGAGAGGCCCTAGGGCAAGGAAGGACAACAGCTGCCTGCCAGCCTTTTaGTTCTGGGGAGTCCGAGAA | + |
|
Preference number: 5 (lower is better) Translates to: RSSIPGPQRGPRARKDNSCLPAF*FWGVRE Trigger: TTCTCGGACTCCCCAGAACAAAAAGGCTGGCAGGCA...GCTGTTGTCCTTCCTTGCCCTAGGGCCTCTCTGGGGCCCTGGGATGCTACTACG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000135986.9 ENSMUST00000155511.8 |
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| CDS-3UTR CAA 90 bp | ACAACAGCACCTGCTCAGGGAAACGCACCAGCCACCAGGCAGGAATGGCTGGCTTCAGCTTCTAGCAGCTaGCTGCTGCTCTCCTCCACC | + |
|
Preference number: 5 (lower is better) Translates to: TTAPAQGNAPATRQEWLASASSS*LLLSST Trigger: GGTGGAGGAGAGCAGCAGCAAGCTGCTAGAAGCTGA...AGCCAGCCATTCCTGCCTGGTGGCTGGTGCGTTTCCCTGAGCAGGTGCTGTTGT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000135986.9 |
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| CDS-3UTR CAA 90 bp | AGATGGCTCCAGGTGGATGAGCCATCAGGAAGCACCGAGGGGCTCATCTATGTGGAGTTAGGCTTGGTGTaGGCAGCAGGAGGCCCTGGC | + |
|
Preference number: 5 (lower is better) Translates to: RWLQVDEPSGSTEGLIYVELGLV*AAGGPG Trigger: GCCAGGGCCTCCTGCTGCCAACACCAAGCCTAACTC...CACATAGATGAGCCCCTCGGTGCTTCCTGATGGCTCATCCACCTGGAGCCATCT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000135986.9 |
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| CDS TCA 90 bp | CATCGTCATGCCTGCCCTTCTCCACCAGGGTTGTCATCTGGCTCCTaGGGGTCTTCACCTCGCTGGACAGCACCTTGTTGCGAGACCTCA | + |
|
Preference number: 5 (lower is better) Translates to: HRHACPSPPGLSSGS*GSSPRWTAPCCETS Trigger: TGAGGTCTCGCAACAAGGTGCTGTCCAGCGAGGTGAAGACCCTCAGGAGCCAGATGACAACCCTGGTGGAGAAGGGCAGGCATGACGATG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000135986.9 |
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| CDS TCA 90 bp | GGTCACAGAGCGGGAAGATCCAAGCCTGCCAACATGATCGCCTGCTaGGGCTGGAGAGTTGGTTATCGGGGTCTGGTCCTCAGGGAACCT | + |
|
Preference number: 5 (lower is better) Translates to: GHRAGRSKPANMIAC*GWRVGYRGLVLREP Trigger: AGGTTCCCTGAGGACCAGACCCCGATAACCAACTCTCCAGCCTCAGCAGGCGATCATGTTGGCAGGCTTGGATCTTCCCGCTCTGTGACC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000135986.9 |
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| CDS GCA 90 bp | CCTGCATCAGTGGCCCCCTTGGATGGTGGCTTGGCTGACGCCATCTaGAGTTGGTGTTCCAGCTCCTGGATGCGATTGGTCAGCTGCTTT | + |
|
Preference number: 5 (lower is better) Translates to: PASVAPLDGGLADAI*SWCSSSWMRLVSCF Trigger: AAAGCAGCTGACCAATCGCATCCAGGAGCTGGAACACCAACTGCAGATGGCGTCAGCCAAGCCACCATCCAAGGGGGCCACTGATGCAGG 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000135986.9 |
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| CDS GCA 90 bp | TTGCGCAGGTCACTCATCTTCAGGTTGGTGGCTGCCAGCCTGTCCTaGAGAGCTTTCACCTCTGGGGTCTCCAGCAAAGCTCTGTCTCCC | + |
|
Preference number: 5 (lower is better) Translates to: LRRSLIFRLVAASLS*RAFTSGVSSKALSP Trigger: GGGAGACAGAGCTTTGCTGGAGACCCCAGAGGTGAAAGCTCTGCAGGACAGGCTGGCAGCCACCAACCTGAAGATGAGTGACCTGCGCAA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000135986.9 |
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| CDS GCA 90 bp | CTGCTGCTTCGTTGGGCCTCACTGTTGACCTTCTGGTCCAGGTGCTaGTGTGATGTGCGTCTCGATTCCTCCTGCACACTCAGGCTGCTC | + |
|
Preference number: 5 (lower is better) Translates to: LLLRWASLLTFWSRC*CDVRLDSSCTLRLL Trigger: GAGCAGCCTGAGTGTGCAGGAGGAATCGAGACGCACATCACAGCAGCACCTGGACCAGAAGGTCAACAGTGAGGCCCAACGAAGCAGCAG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000135986.9 |
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| CDS GCA 90 bp | AGGCTGCTGCTTCGTTGGGCCTCACTGTTGACCTTCTGGTCCAGGTaGTGCTGTGATGTGCGTCTCGATTCCTCCTGCACACTCAGGCTG | + |
|
Preference number: 5 (lower is better) Translates to: RLLLRWASLLTFWSR*CCDVRLDSSCTLRL Trigger: CAGCCTGAGTGTGCAGGAGGAATCGAGACGCACATCACAGCAGCACCTGGACCAGAAGGTCAACAGTGAGGCCCAACGAAGCAGCAGCCT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000135986.9 |
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| CDS GCA 90 bp | ACCTCAGCAGCCTGCCAGAGGGCCTTCATTTCTGCAGCTTGTGCCTaGCAGCCTTTTTGTTCTGGGGAGTCCGAGAACCTGGGCGATGTC | + |
|
Preference number: 5 (lower is better) Translates to: TSAACQRAFISAACA*QPFCSGESENLGDV Trigger: GACATCGCCCAGGTTCTCGGACTCCCCAGAACAAAAAGGCTGGCAGGCACAAGCTGCAGAAATGAAGGCCCTCTGGCAGGCTGCTGAGGT 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000135986.9 ENSMUST00000142783.2 ENSMUST00000155511.8 |
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| CDS CCA 90 bp | GGACTAGGCAGGGAAGGCCTCGTGAGAGCAGATTCCACAAGTGTATaGCCCAGGCTGGTCACAGAGCGGGAAGATCCAAGCCTGCCAACA | + |
|
Preference number: 5 (lower is better) Translates to: GLGREGLVRADSTSV*PRLVTEREDPSLPT Trigger: TGTTGGCAGGCTTGGATCTTCCCGCTCTGTGACCAGCCTGGGCCATACACTTGTGGAATCTGCTCTCACGAGGCCTTCCCTGCCTAGTCC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000135986.9 ENSMUST00000142783.2 ENSMUST00000155511.8 |
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| CDS CCA 90 bp | GAGGGCCTTCATTTCTGCAGCTTGTGCCTGCCAGCCTTTTTGTTCTaGGGAGTCCGAGAACCTGGGCGATGTCCCATGGGGACTAGGCAG | + |
|
Preference number: 5 (lower is better) Translates to: EGLHFCSLCLPAFLF*GVREPGRCPMGTRQ Trigger: CTGCCTAGTCCCCATGGGACATCGCCCAGGTTCTCGGACTCCCCAGAACAAAAAGGCTGGCAGGCACAAGCTGCAGAAATGAAGGCCCTC 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000135986.9 ENSMUST00000142783.2 ENSMUST00000155511.8 |
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| CDS CCA 90 bp | TCTAGGCGCATCTTCTCCAGGTGCTGTTCCAACAGCACAGCTCGCTaGCGCTCTTCCTGCAGTCTCCGCTCAGCTTCTAGCAGCTTGCTG | + |
|
Preference number: 5 (lower is better) Translates to: SRRIFSRCCSNSTAR*RSSCSLRSASSSLL Trigger: CAGCAAGCTGCTAGAAGCTGAGCGGAGACTGCAGGAAGAGCGCCAGCGAGCTGTGCTGTTGGAACAGCACCTGGAGAAGATGCGCCTAGA 59% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000135986.9 ENSMUST00000142783.2 |
||
| CDS CCA 90 bp | GCCCAGGAAGCCTCCATCCAGGAGTCTCTACCCTTTCCAGAAGGCTaGGCAGGAAGCACCTGGCATTCAGCTCCTGTATCTGGGACTCCA | + |
|
Preference number: 5 (lower is better) Translates to: AQEASIQESLPFPEG*AGSTWHSAPVSGTP Trigger: TGGAGTCCCAGATACAGGAGCTGAATGCCAGGTGCTTCCTGCCCAGCCTTCTGGAAAGGGTAGAGACTCCTGGATGGAGGCTTCCTGGGC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000142783.2 |
||
| CDS-3UTR CAA 90 bp | CTGCTCAGGGAAACGCACCAGCCACCAGGCAGGAATGGCTGGCTCCGCCCCTGGTTCTTCTTGAGGTGTTaGATCTCAAAGTCCCTCTCC | + |
|
Preference number: 5 (lower is better) Translates to: LLRETHQPPGRNGWLRPWFFLRC*ISKSLS Trigger: GGAGAGGGACTTTGAGATCAAACACCTCAAGAAGAA...CCAGGGGCGGAGCCAGCCATTCCTGCCTGGTGGCTGGTGCGTTTCCCTGAGCAG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000135986.9 |
||
| CDS-3UTR CAA 90 bp | GATGGCTCCAGGTGGATGAGCCATCAGGAAGCACCGAGGGGCTCATCTATGTGTGCTGAGGCTGGAGAGTaGGTTATCGGGGTCTGGTCC | + |
|
Preference number: 5 (lower is better) Translates to: DGSRWMSHQEAPRGSSMCAEAGE*VIGVWS Trigger: GGACCAGACCCCGATAACCAACTCTCCAGCCTCAGC...ACACATAGATGAGCCCCTCGGTGCTTCCTGATGGCTCATCCACCTGGAGCCATC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000135986.9 ENSMUST00000155511.8 |
||
| CDS-3UTR CAA 90 bp | CACCACCACACCCTTGTACACAGCACTGGGAACGGAGCCAGGGCTCTGTGCTTGTGCCTGCCAGCCTTTTaGTTCTGGGGAGTCCGAGAA | + |
|
Preference number: 5 (lower is better) Translates to: HHHTLVHSTGNGARALCLCLPAF*FWGVRE Trigger: TTCTCGGACTCCCCAGAACAAAAAGGCTGGCAGGCA...CAAGCACAGAGCCCTGGCTCCGTTCCCAGTGCTGTGTACAAGGGTGTGGTGGTG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000142783.2 |
||
| CDS-3UTR CAA 90 bp | TTGCCTGCTCTGCTACGACACCAAACCGCTTCTAGGAGGAGCCGAGTGAGCGCTACAGTGACAAACTCATaGAGCCGGTCCCGCTCCACC | + |
|
Preference number: 5 (lower is better) Translates to: LPALLRHQTASRRSRVSATVTNS*SRSRST Trigger: GGTGGAGCGGGACCGGCTCAATGAGTTTGTCACTGT...AGCGCTCACTCGGCTCCTCCTAGAAGCGGTTTGGTGTCGTAGCAGAGCAGGCAA 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000135986.9 ENSMUST00000155511.8 |
||
| CDS-3UTR CAA 90 bp | TGGGTGCTAGGGCCGAGTGAGGGGCTACAGGGGAGGGCTAGATGGCTCCAGGTGGAGGATGAGTCTTTCTaGGCACTTCCAGCTGAGTTA | + |
|
Preference number: 5 (lower is better) Translates to: WVLGPSEGLQGRARWLQVEDESF*ALPAEL Trigger: TAACTCAGCTGGAAGTGCCAAGAAAGACTCATCCTC...CACCTGGAGCCATCTAGCCCTCCCCTGTAGCCCCTCACTCGGCCCTAGCACCCA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000135986.9 |
||
| CDS GCA 90 bp | ACAGTGACAAACTCATTGAGCCGGTCCCGCTCCACCTCAGCAGCCTaGCAGAGGGCCTTCATTTCTGCAGCTTGTGCCTGCCAGCCTTTT | + |
|
Preference number: 5 (lower is better) Translates to: TVTNSLSRSRSTSAA*QRAFISAACACQPF Trigger: AAAAGGCTGGCAGGCACAAGCTGCAGAAATGAAGGCCCTCTGGCAGGCTGCTGAGGTGGAGCGGGACCGGCTCAATGAGTTTGTCACTGT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000135986.9 ENSMUST00000142783.2 ENSMUST00000155511.8 |
||
| CDS CCA 90 bp | TCAGTGGCCCCCTTGGATGGTGGCTTGGCTGACGCCATCTGCAGTTaGTGTTCCAGCTCCTGGATGCGATTGGTCAGCTGCTTTATCCTG | + |
|
Preference number: 5 (lower is better) Translates to: SVAPLDGGLADAICS*CSSSWMRLVSCFIL Trigger: CAGGATAAAGCAGCTGACCAATCGCATCCAGGAGCTGGAACACCAACTGCAGATGGCGTCAGCCAAGCCACCATCCAAGGGGGCCACTGA 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000135986.9 |
||
| CDS-3UTR CAA 90 bp | GCTGTGTTCTACTGCTTGTTGGCTTTCTGCTGCCGTAGTGCCTGCAGGAAGACCGCTGAGGCTGGAGAGTaGGTTATCGGGGTCTGGTCC | + |
|
Preference number: 5 (lower is better) Translates to: AVFYCLLAFCCRSACRKTAEAGE*VIGVWS Trigger: GGACCAGACCCCGATAACCAACTCTCCAGCCTCAGC...GGTCTTCCTGCAGGCACTACGGCAGCAGAAAGCCAACAAGCAGTAGAACACAGC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000155511.8 |
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| CDS TCA 90 bp | CCATCTGCTTCTGTAACCTTCGGTGCTGTAGCTCCTGCATGGCCTTaGACTGGAGTCGCAGAGTATCTGCCGAGCTCTCATCAGCCGCCA | + |
|
Preference number: 5 (lower is better) Translates to: PSASVTFGAVAPAWP*TGVAEYLPSSHQPP Trigger: TGGCGGCTGATGAGAGCTCGGCAGATACTCTGCGACTCCAGTTCAAGGCCATGCAGGAGCTACAGCACCGAAGGTTACAGAAGCAGATGG 57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000135986.9 |
||
| CDS TCA 90 bp | GCTTCGTTGGGCCTCACTGTTGACCTTCTGGTCCAGGTGCTGCTGTaGTGTGCGTCTCGATTCCTCCTGCACACTCAGGCTGCTCAGAAT | + |
|
Preference number: 5 (lower is better) Translates to: ASLGLTVDLLVQVLL*CASRFLLHTQAAQN Trigger: ATTCTGAGCAGCCTGAGTGTGCAGGAGGAATCGAGACGCACATCACAGCAGCACCTGGACCAGAAGGTCAACAGTGAGGCCCAACGAAGC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000135986.9 |
||
| CDS GCA 90 bp | GCTTGTTCTGACGCTGTCCCAGTTGCTTCTCAAGATCTCGGACCCTaGTCTGCAGCACTAGAATTTGTTGAGCCCTTCCCCGCCAGGTCC | + |
|
Preference number: 5 (lower is better) Translates to: ACSDAVPVASQDLGP*SAALEFVEPFPARS Trigger: GGACCTGGCGGGGAAGGGCTCAACAAATTCTAGTGCTGCAGAGCAGGGTCCGAGATCTTGAGAAGCAACTGGGACAGCGTCAGAACAAGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000135986.9 |
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| CDS GCA 90 bp | ACCTTCTGGTCCAGGTGCTGCTGTGATGTGCGTCTCGATTCCTCCTaGACACTCAGGCTGCTCAGAATGTCCTGCAGCTGCTTTAGCTGG | + |
|
Preference number: 5 (lower is better) Translates to: TFWSRCCCDVRLDSS*TLRLLRMSCSCFSW Trigger: CCAGCTAAAGCAGCTGCAGGACATTCTGAGCAGCCTGAGTGTGCAGGAGGAATCGAGACGCACATCACAGCAGCACCTGGACCAGAAGGT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000135986.9 |
||
| CDS CCA 90 bp | TCCAGAAGGCTGGGCAGGAAGCACCTGGCATTCAGCTCCTGTATCTaGGACTCCATGGGCATATCGCAGAGCTGTGTGGAGGATGAGTCT | + |
|
Preference number: 5 (lower is better) Translates to: SRRLGRKHLAFSSCI*DSMGISQSCVEDES Trigger: AGACTCATCCTCCACACAGCTCTGCGATATGCCCATGGAGTCCCAGATACAGGAGCTGAATGCCAGGTGCTTCCTGCCCAGCCTTCTGGA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000142783.2 |
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| CDS-3UTR CAA 90 bp | ACTGACTGCCACGCTACACCACTGCTGAGTGCTGACATTACAGGTGTGCACCACTCAGCTTCTAGCAGCTaGCTGCTGCTCTCCTCCACC | + |
|
Preference number: 5 (lower is better) Translates to: TDCHATPLLSADITGVHHSASSS*LLLSST Trigger: GGTGGAGGAGAGCAGCAGCAAGCTGCTAGAAGCTGA...GTGGTGCACACCTGTAATGTCAGCACTCAGCAGTGGTGTAGCGTGGCAGTCAGT 57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000142783.2 |
||
| CDS-3UTR CAA 90 bp | AAGGAAGGACAACAGCACCTGCTCAGGGAAACGCACCAGCCACCAGGCAGGAATGCAGGAGGCCCTGGCTaGTTCTTAGTTTTCTGGGAC | + |
|
Preference number: 5 (lower is better) Translates to: KEGQQHLLRETHQPPGRNAGGPG*FLVFWD Trigger: GTCCCAGAAAACTAAGAACAAGCCAGGGCCTCCTGC...ATTCCTGCCTGGTGGCTGGTGCGTTTCCCTGAGCAGGTGCTGTTGTCCTTCCTT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000135986.9 |
||
| CDS TCA 90 bp | GTTGGTGTTCCAGCTCCTGGATGCGATTGGTCAGCTGCTTTATCCTaGCCTTTGCGCTCTCTGACTCGGCCATCAGCCCCCGGTTCTTTT | + |
|
Preference number: 5 (lower is better) Translates to: VGVPAPGCDWSAALS*PLRSLTRPSAPGSF Trigger: AAAAGAACCGGGGGCTGATGGCCGAGTCAGAGAGCGCAAAGGTCAGGATAAAGCAGCTGACCAATCGCATCCAGGAGCTGGAACACCAAC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000135986.9 |
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| CDS GCA 90 bp | AGCTGCTTTAGCTGGTCCATAAGGGCATCAATCAGCTCATCGTCATaGCTGCCCTTCTCCACCAGGGTTGTCATCTGGCTCCTGAGGGTC | + |
|
Preference number: 5 (lower is better) Translates to: SCFSWSIRASISSSS*LPFSTRVVIWLLRV Trigger: GACCCTCAGGAGCCAGATGACAACCCTGGTGGAGAAGGGCAGGCATGACGATGAGCTGATTGATGCCCTTATGGACCAGCTAAAGCAGCT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000135986.9 |
||
| CDS CCA 90 bp | GATGGTGGCTTGGCTGACGCCATCTGCAGTTGGTGTTCCAGCTCCTaGATGCGATTGGTCAGCTGCTTTATCCTGACCTTTGCGCTCTCT | + |
|
Preference number: 5 (lower is better) Translates to: DGGLADAICSWCSSS*MRLVSCFILTFALS Trigger: AGAGAGCGCAAAGGTCAGGATAAAGCAGCTGACCAATCGCATCCAGGAGCTGGAACACCAACTGCAGATGGCGTCAGCCAAGCCACCATC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000135986.9 |
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| CDS CCA 90 bp | TGGGCAGGAAGCACCTGGCATTCAGCTCCTGTATCTGGGACTCCATaGGCATATCGCAGAGCTGTGTGGAGGATGAGTCTTTCTTGGCAC | + |
|
Preference number: 5 (lower is better) Translates to: WAGSTWHSAPVSGTP*AYRRAVWRMSLSWH Trigger: GTGCCAAGAAAGACTCATCCTCCACACAGCTCTGCGATATGCCCATGGAGTCCCAGATACAGGAGCTGAATGCCAGGTGCTTCCTGCCCA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000142783.2 |
||
| CDS-3UTR CAA 90 bp | AAGGAAGGACAACAGCACCTGCTCAGGGAAACGCACCAGCCACCAGGCAGGAATATACTGGACACTGAGTaGCCCAATCTCCAGCTCCAG | + |
|
Preference number: 5 (lower is better) Translates to: KEGQQHLLRETHQPPGRNILDTE*PNLQLQ Trigger: CTGGAGCTGGAGATTGGGCAACTCAGTGTCCAGTAT...ATTCCTGCCTGGTGGCTGGTGCGTTTCCCTGAGCAGGTGCTGTTGTCCTTCCTT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000135986.9 |
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| CDS-3UTR CAA 90 bp | CCTGGCATTCAGCTCCTGTATCTGGGACTCCATGGGCATATCGCAGAGCTGTGTTGCCTGCCAGCCTTTTaGTTCTGGGGAGTCCGAGAA | + |
|
Preference number: 5 (lower is better) Translates to: PGIQLLYLGLHGHIAELCCLPAF*FWGVRE Trigger: TTCTCGGACTCCCCAGAACAAAAAGGCTGGCAGGCA...ACACAGCTCTGCGATATGCCCATGGAGTCCCAGATACAGGAGCTGAATGCCAGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000155511.8 |
||
| CDS-3UTR CAA 90 bp | CCACCACACCCTTGTACACAGCACTGGGAACGGAGCCAGGGCTCTGTGCTTGCTGAGGATGAGTCTTTCTaGGCACTTCCAGCTGAGTTA | + |
|
Preference number: 5 (lower is better) Translates to: PPHPCTQHWERSQGSVLAEDESF*ALPAEL Trigger: TAACTCAGCTGGAAGTGCCAAGAAAGACTCATCCTC...AGCAAGCACAGAGCCCTGGCTCCGTTCCCAGTGCTGTGTACAAGGGTGTGGTGG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000142783.2 |
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| CDS GCA 90 bp | GTGCGTCTCGATTCCTCCTGCACACTCAGGCTGCTCAGAATGTCCTaGAGCTGCTTTAGCTGGTCCATAAGGGCATCAATCAGCTCATCG | + |
|
Preference number: 5 (lower is better) Translates to: VRLDSSCTLRLLRMS*SCFSWSIRASISSS Trigger: CGATGAGCTGATTGATGCCCTTATGGACCAGCTAAAGCAGCTGCAGGACATTCTGAGCAGCCTGAGTGTGCAGGAGGAATCGAGACGCAC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000135986.9 |
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| CDS CCA 90 bp | TCCTGCACACTCAGGCTGCTCAGAATGTCCTGCAGCTGCTTTAGCTaGTCCATAAGGGCATCAATCAGCTCATCGTCATGCCTGCCCTTC | + |
|
Preference number: 5 (lower is better) Translates to: SCTLRLLRMSCSCFS*SIRASISSSSCLPF Trigger: GAAGGGCAGGCATGACGATGAGCTGATTGATGCCCTTATGGACCAGCTAAAGCAGCTGCAGGACATTCTGAGCAGCCTGAGTGTGCAGGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000135986.9 |
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| CDS GCA 90 bp | CTCGATTCCTCCTGCACACTCAGGCTGCTCAGAATGTCCTGCAGCTaGTTTAGCTGGTCCATAAGGGCATCAATCAGCTCATCGTCATGC | + |
|
Preference number: 5 (lower is better) Translates to: LDSSCTLRLLRMSCS*FSWSIRASISSSSC Trigger: GCATGACGATGAGCTGATTGATGCCCTTATGGACCAGCTAAAGCAGCTGCAGGACATTCTGAGCAGCCTGAGTGTGCAGGAGGAATCGAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000135986.9 |
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| CDS-3UTR CAA 90 bp | TGGATGAGCCATCAGGAAGCACCGAGGGGCTCATCTATGTGTGGAGAGCCCGTAGTTGTCAGCTTTGCTTaGACAGCTCAGCTCTTTCTC | + |
|
Preference number: 5 (lower is better) Translates to: WMSHQEAPRGSSMCGEPVVVSFA*TAQLFL Trigger: GAGAAAGAGCTGAGCTGTCAAAGCAAAGCTGACAAC...TACGGGCTCTCCACACATAGATGAGCCCCTCGGTGCTTCCTGATGGCTCATCCA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000135986.9 |
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| CDS TCA 90 bp | CTGGATGCGATTGGTCAGCTGCTTTATCCTGACCTTTGCGCTCTCTaGCTCGGCCATCAGCCCCCGGTTCTTTTTGGACAGTTCAACAAT | + |
|
Preference number: 5 (lower is better) Translates to: LDAIGQLLYPDLCAL*LGHQPPVLFGQFNN Trigger: ATTGTTGAACTGTCCAAAAAGAACCGGGGGCTGATGGCCGAGTCAGAGAGCGCAAAGGTCAGGATAAAGCAGCTGACCAATCGCATCCAG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000135986.9 |
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| CDS GCA 90 bp | CTCTTTTTCTCCATCTGCTTCTGTAACCTTCGGTGCTGTAGCTCCTaGATGGCCTTGAACTGGAGTCGCAGAGTATCTGCCGAGCTCTCA | + |
|
Preference number: 5 (lower is better) Translates to: LFFSICFCNLRCCSS*MALNWSRRVSAELS Trigger: TGAGAGCTCGGCAGATACTCTGCGACTCCAGTTCAAGGCCATGCAGGAGCTACAGCACCGAAGGTTACAGAAGCAGATGGAGAAAAAGAG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000135986.9 |
||
| CDS-3UTR CAA 90 bp | GACTTGTTATTTCAAGCTCAGGGCTCTGCCCTGTGCAGTAAGTACACAGAGAGGGCAGACTGGATCTGGTaGCGCAGGTCACTCATCTTC | + |
|
Preference number: 5 (lower is better) Translates to: DLLFQAQGSALCSKYTERADWIW*RRSLIF Trigger: GAAGATGAGTGACCTGCGCAACCAGATCCAGTCTGC...CCTCTCTGTGTACTTACTGCACAGGGCAGAGCCCTGAGCTTGAAATAACAAGTC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000135986.9 |
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| CDS-3UTR CAA 90 bp | AGATGGCTCCAGGTGGATGAGCCATCAGGAAGCACCGAGGGGCTCATCTATGTGGACAGTTCAACAATTTaGGTGGCAACTAGATCTCCA | + |
|
Preference number: 5 (lower is better) Translates to: RWLQVDEPSGSTEGLIYVDSSTI*VATRSP Trigger: TGGAGATCTAGTTGCCACCAAAATTGTTGAACTGTC...CACATAGATGAGCCCCTCGGTGCTTCCTGATGGCTCATCCACCTGGAGCCATCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000135986.9 |
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| CDS TCA 90 bp | TCAGTAGGTTTTTCTCCTGTGCTGTCATCTTCCTTGAGTCTGAACTaGGAGGCACCTCAGAGCTCGATGAACCTGCAGGCTTGTTCTGAC | + |
|
Preference number: 5 (lower is better) Translates to: SVGFSPVLSSSLSLN*EAPQSSMNLQACSD Trigger: GTCAGAACAAGCCTGCAGGTTCATCGAGCTCTGAGGTGCCTCTCAGTTCAGACTCAAGGAAGATGACAGCACAGGAGAAAAACCTACTGA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000135986.9 |
||
| CDS CCA 72 bp | TCGCCTGCTGAGGCTGGAGAGTTGGTTATCGGGGTCTaGTCCTCAGGGAACCTGGCATCGGCGGGGCTGGCC | + |
|
Preference number: 6 (lower is better) Translates to: SPAEAGELVIGV*SSGNLASAGLA Trigger: GGCCAGCCCCGCCGATGCCAGGTTCCCTGAGGACCAGACCCCGATAACCAACTCTCCAGCCTCAGCAGGCGA 67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000135986.9 |
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| CDS CCA 72 bp | CCAGCTGCCGCACCTTGGCTTCACGATCAGCCACCATaGCCCGCAGCTGGGCCACAAGGCTGCTGCTTCGTT | + |
|
Preference number: 6 (lower is better) Translates to: PAAAPWLHDQPP*PAAGPQGCCFV Trigger: AACGAAGCAGCAGCCTTGTGGCCCAGCTGCGGGCCATGGTGGCTGATCGTGAAGCCAAGGTGCGGCAGCTGG 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000135986.9 |
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| CDS GCA 72 bp | GTGTCCCGCTCGCTGGCCAGTTTCTCCCAGCTCTCCTaGTTGTCCCTCTCCAGGCTGCGGATCCTCAGTAGG | + |
|
Preference number: 6 (lower is better) Translates to: VSRSLASFSQLS*LSLSRLRILSR Trigger: CCTACTGAGGATCCGCAGCCTGGAGAGGGACAAGCAGGAGAGCTGGGAGAAACTGGCCAGCGAGCGGGACAC 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000135986.9 |
||
| CDS CCA 72 bp | ATGGCCCGCAGCTGGGCCACAAGGCTGCTGCTTCGTTaGGCCTCACTGTTGACCTTCTGGTCCAGGTGCTGC | + |
|
Preference number: 6 (lower is better) Translates to: MARSWATRLLLR*ASLLTFWSRCC Trigger: GCAGCACCTGGACCAGAAGGTCAACAGTGAGGCCCAACGAAGCAGCAGCCTTGTGGCCCAGCTGCGGGCCAT 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000135986.9 |
||
| CDS CAA 72 bp | CATGGCCCGCAGCTGGGCCACAAGGCTGCTGCTTCGTaGGGCCTCACTGTTGACCTTCTGGTCCAGGTGCTG | + |
|
Preference number: 6 (lower is better) Translates to: HGPQLGHKAAAS*GLTVDLLVQVL Trigger: CAGCACCTGGACCAGAAGGTCAACAGTGAGGCCCAACGAAGCAGCAGCCTTGTGGCCCAGCTGCGGGCCATG 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000135986.9 |
||
| CDS CAA 72 bp | CTGAGTTGCCCAATCTCCAGCTCCAGCTGCCGCACCTaGGCTTCACGATCAGCCACCATGGCCCGCAGCTGG | + |
|
Preference number: 6 (lower is better) Translates to: LSCPISSSSCRT*ASRSATMARSW Trigger: CCAGCTGCGGGCCATGGTGGCTGATCGTGAAGCCAAGGTGCGGCAGCTGGAGCTGGAGATTGGGCAACTCAG 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000135986.9 |
||
| CDS CAA 90 bp | CCCGTCTGGGTCTTCAGTGGCTTAGCCCCTGCATCAGTGGCCCCCTaGGATGGTGGCTTGGCTGACGCCATCTGCAGTTGGTGTTCCAGC | + |
|
Preference number: 6 (lower is better) Translates to: PVWVFSGLAPASVAP*DGGLADAICSWCSS Trigger: GCTGGAACACCAACTGCAGATGGCGTCAGCCAAGCCACCATCCAAGGGGGCCACTGATGCAGGGGCTAAGCCACTGAAGACCCAGACGGG 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000135986.9 |
||
| CDS CAA 90 bp | GCCCGCAGCTGGGCCACAAGGCTGCTGCTTCGTTGGGCCTCACTGTaGACCTTCTGGTCCAGGTGCTGCTGTGATGTGCGTCTCGATTCC | + |
|
Preference number: 6 (lower is better) Translates to: ARSWATRLLLRWASL*TFWSRCCCDVRLDS Trigger: GGAATCGAGACGCACATCACAGCAGCACCTGGACCAGAAGGTCAACAGTGAGGCCCAACGAAGCAGCAGCCTTGTGGCCCAGCTGCGGGC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000135986.9 |
||
| CDS CAA 90 bp | TACTGGACACTGAGTTGCCCAATCTCCAGCTCCAGCTGCCGCACCTaGGCTTCACGATCAGCCACCATGGCCCGCAGCTGGGCCACAAGG | + |
|
Preference number: 6 (lower is better) Translates to: YWTLSCPISSSSCRT*ASRSATMARSWATR Trigger: CCTTGTGGCCCAGCTGCGGGCCATGGTGGCTGATCGTGAAGCCAAGGTGCGGCAGCTGGAGCTGGAGATTGGGCAACTCAGTGTCCAGTA 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000135986.9 |
||
| CDS CAA 90 bp | CTGCTGCTCTCCTCCACCCGCTTTTGCAGCACAGTGACAAACTCATaGAGCCGGTCCCGCTCCACCTCAGCAGCCTGCCAGAGGGCCTTC | + |
|
Preference number: 6 (lower is better) Translates to: LLLSSTRFCSTVTNS*SRSRSTSAACQRAF Trigger: GAAGGCCCTCTGGCAGGCTGCTGAGGTGGAGCGGGACCGGCTCAATGAGTTTGTCACTGTGCTGCAAAAGCGGGTGGAGGAGAGCAGCAG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000135986.9 ENSMUST00000142783.2 |
||
| CDS CAA 90 bp | TGTTGGCAGCAGGAGGCCCGCTTTTGCAGCACAGTGACAAACTCATaGAGCCGGTCCCGCTCCACCTCAGCAGCCTGCCAGAGGGCCTTC | + |
|
Preference number: 6 (lower is better) Translates to: CWQQEARFCSTVTNS*SRSRSTSAACQRAF Trigger: GAAGGCCCTCTGGCAGGCTGCTGAGGTGGAGCGGGACCGGCTCAATGAGTTTGTCACTGTGCTGCAAAAGCGGGCCTCCTGCTGCCAACA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000155511.8 |
||
| CDS GCA 72 bp | GAGGCCCTGGATGGCTCTAGGCGCATCTTCTCCAGGTaGTGTTCCAACAGCACAGCTCGCTGGCGCTCTTCC | + |
|
Preference number: 6 (lower is better) Translates to: EALDGSRRIFSR*CSNSTARWRSS Trigger: GGAAGAGCGCCAGCGAGCTGTGCTGTTGGAACAGCACCTGGAGAAGATGCGCCTAGAGCCATCCAGGGCCTC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000135986.9 ENSMUST00000142783.2 |
||
| CDS CAA 72 bp | CAGGAGGCCCGCTTTTGCAGCACAGTGACAAACTCATaGAGCCGGTCCCGCTCCACCTCAGCAGCCTGCCAG | + |
|
Preference number: 6 (lower is better) Translates to: QEARFCSTVTNS*SRSRSTSAACQ Trigger: CTGGCAGGCTGCTGAGGTGGAGCGGGACCGGCTCAATGAGTTTGTCACTGTGCTGCAAAAGCGGGCCTCCTG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000155511.8 |
||
| CDS TCA 72 bp | GCCTGCCCTTCTCCACCAGGGTTGTCATCTGGCTCCTaGGGGTCTTCACCTCGCTGGACAGCACCTTGTTGC | + |
|
Preference number: 6 (lower is better) Translates to: ACPSPPGLSSGS*GSSPRWTAPCC Trigger: GCAACAAGGTGCTGTCCAGCGAGGTGAAGACCCTCAGGAGCCAGATGACAACCCTGGTGGAGAAGGGCAGGC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000135986.9 |
||
| CDS TCA 72 bp | GGGCCACAAGGCTGCTGCTTCGTTGGGCCTCACTGTTaGCCTTCTGGTCCAGGTGCTGCTGTGATGTGCGTC | + |
|
Preference number: 6 (lower is better) Translates to: GPQGCCFVGPHC*PSGPGAAVMCV Trigger: GACGCACATCACAGCAGCACCTGGACCAGAAGGTCAACAGTGAGGCCCAACGAAGCAGCAGCCTTGTGGCCC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000135986.9 |
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| CDS GCA 72 bp | GTGGCCCCCTTGGATGGTGGCTTGGCTGACGCCATCTaGAGTTGGTGTTCCAGCTCCTGGATGCGATTGGTC | + |
|
Preference number: 6 (lower is better) Translates to: VAPLDGGLADAI*SWCSSSWMRLV Trigger: GACCAATCGCATCCAGGAGCTGGAACACCAACTGCAGATGGCGTCAGCCAAGCCACCATCCAAGGGGGCCAC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000135986.9 |
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| CDS CAA 72 bp | GTCTTCAGTGGCTTAGCCCCTGCATCAGTGGCCCCCTaGGATGGTGGCTTGGCTGACGCCATCTGCAGTTGG | + |
|
Preference number: 6 (lower is better) Translates to: VFSGLAPASVAP*DGGLADAICSW Trigger: CCAACTGCAGATGGCGTCAGCCAAGCCACCATCCAAGGGGGCCACTGATGCAGGGGCTAAGCCACTGAAGAC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000135986.9 |
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| CDS CAA 72 bp | TCCCGCTCGCTGGCCAGTTTCTCCCAGCTCTCCTGCTaGTCCCTCTCCAGGCTGCGGATCCTCAGTAGGTTT | + |
|
Preference number: 6 (lower is better) Translates to: SRSLASFSQLSC*SLSRLRILSRF Trigger: AAACCTACTGAGGATCCGCAGCCTGGAGAGGGACAAGCAGGAGAGCTGGGAGAAACTGGCCAGCGAGCGGGA 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000135986.9 |
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| CDS CAA 72 bp | TCCTCCACCCGCTTTTGCAGCACAGTGACAAACTCATaGAGCCGGTCCCGCTCCACCTCAGCAGCCTGCCAG | + |
|
Preference number: 6 (lower is better) Translates to: SSTRFCSTVTNS*SRSRSTSAACQ Trigger: CTGGCAGGCTGCTGAGGTGGAGCGGGACCGGCTCAATGAGTTTGTCACTGTGCTGCAAAAGCGGGTGGAGGA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000135986.9 ENSMUST00000142783.2 |
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| CDS CAA 90 bp | TGGAGGGTGTCCCGCTCGCTGGCCAGTTTCTCCCAGCTCTCCTGCTaGTCCCTCTCCAGGCTGCGGATCCTCAGTAGGTTTTTCTCCTGT | + |
|
Preference number: 6 (lower is better) Translates to: WRVSRSLASFSQLSC*SLSRLRILSRFFSC Trigger: ACAGGAGAAAAACCTACTGAGGATCCGCAGCCTGGAGAGGGACAAGCAGGAGAGCTGGGAGAAACTGGCCAGCGAGCGGGACACCCTCCA 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000135986.9 |
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| CDS CAA 90 bp | GCTCGCTGGCGCTCTTCCTGCAGTCTCCGCTCAGCTTCTAGCAGCTaGCTGCTGCTCTCCTCCACCCGCTTTTGCAGCACAGTGACAAAC | + |
|
Preference number: 6 (lower is better) Translates to: ARWRSSCSLRSASSS*LLLSSTRFCSTVTN Trigger: GTTTGTCACTGTGCTGCAAAAGCGGGTGGAGGAGAGCAGCAGCAAGCTGCTAGAAGCTGAGCGGAGACTGCAGGAAGAGCGCCAGCGAGC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000135986.9 ENSMUST00000142783.2 |
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| CDS TCA 72 bp | GCGGGAAGATCCAAGCCTGCCAACATGATCGCCTGCTaGGGCTGGAGAGTTGGTTATCGGGGTCTGGTCCTC | + |
|
Preference number: 6 (lower is better) Translates to: AGRSKPANMIAC*GWRVGYRGLVL Trigger: GAGGACCAGACCCCGATAACCAACTCTCCAGCCTCAGCAGGCGATCATGTTGGCAGGCTTGGATCTTCCCGC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000135986.9 ENSMUST00000155511.8 |
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| CDS GCA 72 bp | TACTGGACACTGAGTTGCCCAATCTCCAGCTCCAGCTaGCGCACCTTGGCTTCACGATCAGCCACCATGGCC | + |
|
Preference number: 6 (lower is better) Translates to: YWTLSCPISSSS*RTLASRSATMA Trigger: GGCCATGGTGGCTGATCGTGAAGCCAAGGTGCGGCAGCTGGAGCTGGAGATTGGGCAACTCAGTGTCCAGTA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000135986.9 |
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| CDS GCA 72 bp | GCTCTTCCTGCAGTCTCCGCTCAGCTTCTAGCAGCTTaGTGCTGCTCTCCTCCACCCGCTTTTGCAGCACAG | + |
|
Preference number: 6 (lower is better) Translates to: ALPAVSAQLLAA*CCSPPPAFAAQ Trigger: CTGTGCTGCAAAAGCGGGTGGAGGAGAGCAGCAGCAAGCTGCTAGAAGCTGAGCGGAGACTGCAGGAAGAGC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000135986.9 ENSMUST00000142783.2 |
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| CDS GCA 72 bp | TGCTGTTCCAACAGCACAGCTCGCTGGCGCTCTTCCTaGAGTCTCCGCTCAGCTTCTAGCAGCTTGCTGCTG | + |
|
Preference number: 6 (lower is better) Translates to: CCSNSTARWRSS*SLRSASSSLLL Trigger: CAGCAGCAAGCTGCTAGAAGCTGAGCGGAGACTGCAGGAAGAGCGCCAGCGAGCTGTGCTGTTGGAACAGCA 60% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000135986.9 ENSMUST00000142783.2 |
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| CDS CCA 72 bp | GCCTGCCAACATGATCGCCTGCTGAGGCTGGAGAGTTaGTTATCGGGGTCTGGTCCTCAGGGAACCTGGCAT | + |
|
Preference number: 6 (lower is better) Translates to: ACQHDRLLRLES*LSGSGPQGTWH Trigger: ATGCCAGGTTCCCTGAGGACCAGACCCCGATAACCAACTCTCCAGCCTCAGCAGGCGATCATGTTGGCAGGC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000135986.9 |
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| CDS CCA 72 bp | CACAGCCCGGGATTGATAAAGGTTCCCTTGGAACCATaGGTCATCGGGGCACTGTGGAACCCTCCACAGGCC | + |
|
Preference number: 6 (lower is better) Translates to: HSPGLIKVPLEP*VIGALWNPPQA Trigger: GGCCTGTGGAGGGTTCCACAGTGCCCCGATGACCCATGGTTCCAAGGGAACCTTTATCAATCCCGGGCTGTG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000142783.2 |
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| CDS CAA 72 bp | GCCACACGGAGCTCCTGCTTTGCAGACTGGATCTGGTaGCGCAGGTCACTCATCTTCAGGTTGGTGGCTGCC | + |
|
Preference number: 6 (lower is better) Translates to: ATRSSCFADWIW*RRSLIFRLVAA Trigger: GGCAGCCACCAACCTGAAGATGAGTGACCTGCGCAACCAGATCCAGTCTGCAAAGCAGGAGCTCCGTGTGGC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000135986.9 |
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| CDS CAA 90 bp | GTCATCTGGCTCCTGAGGGTCTTCACCTCGCTGGACAGCACCTTGTaGCGAGACCTCATGCCCTCGAACTTCTTTCTCAGCTCCTCCAGC | + |
|
Preference number: 6 (lower is better) Translates to: VIWLLRVFTSLDSTL*RDLMPSNFFLSSSS Trigger: GCTGGAGGAGCTGAGAAAGAAGTTCGAGGGCATGAGGTCTCGCAACAAGGTGCTGTCCAGCGAGGTGAAGACCCTCAGGAGCCAGATGAC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000135986.9 |
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| CDS TCA 72 bp | GGCCTCACTGTTGACCTTCTGGTCCAGGTGCTGCTGTaGTGTGCGTCTCGATTCCTCCTGCACACTCAGGCT | + |
|
Preference number: 6 (lower is better) Translates to: GLTVDLLVQVLL*CASRFLLHTQA Trigger: AGCCTGAGTGTGCAGGAGGAATCGAGACGCACATCACAGCAGCACCTGGACCAGAAGGTCAACAGTGAGGCC 58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000135986.9 |
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| CDS GCA 72 bp | TCCAGGTGCTGCTGTGATGTGCGTCTCGATTCCTCCTaGACACTCAGGCTGCTCAGAATGTCCTGCAGCTGC | + |
|
Preference number: 6 (lower is better) Translates to: SRCCCDVRLDSS*TLRLLRMSCSC Trigger: GCAGCTGCAGGACATTCTGAGCAGCCTGAGTGTGCAGGAGGAATCGAGACGCACATCACAGCAGCACCTGGA 58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000135986.9 |
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| CDS GCA 72 bp | GCCTGCCAGAGGGCCTTCATTTCTGCAGCTTGTGCCTaGCAGCCTTTTTGTTCTGGGGAGTCCGAGAACCTG | + |
|
Preference number: 6 (lower is better) Translates to: ACQRAFISAACA*QPFCSGESENL Trigger: CAGGTTCTCGGACTCCCCAGAACAAAAAGGCTGGCAGGCACAAGCTGCAGAAATGAAGGCCCTCTGGCAGGC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000135986.9 ENSMUST00000142783.2 ENSMUST00000155511.8 |
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| CDS CCA 72 bp | AGGCTGCTGCTTCGTTGGGCCTCACTGTTGACCTTCTaGTCCAGGTGCTGCTGTGATGTGCGTCTCGATTCC | + |
|
Preference number: 6 (lower is better) Translates to: RLLLRWASLLTF*SRCCCDVRLDS Trigger: GGAATCGAGACGCACATCACAGCAGCACCTGGACCAGAAGGTCAACAGTGAGGCCCAACGAAGCAGCAGCCT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000135986.9 |
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| CDS CCA 72 bp | AGGGAAGGCCTCGTGAGAGCAGATTCCACAAGTGTATaGCCCAGGCTGGTCACAGAGCGGGAAGATCCAAGC | + |
|
Preference number: 6 (lower is better) Translates to: REGLVRADSTSV*PRLVTEREDPS Trigger: GCTTGGATCTTCCCGCTCTGTGACCAGCCTGGGCCATACACTTGTGGAATCTGCTCTCACGAGGCCTTCCCT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000135986.9 ENSMUST00000142783.2 ENSMUST00000155511.8 |
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| CDS CCA 72 bp | ATCTTCTCCAGGTGCTGTTCCAACAGCACAGCTCGCTaGCGCTCTTCCTGCAGTCTCCGCTCAGCTTCTAGC | + |
|
Preference number: 6 (lower is better) Translates to: IFSRCCSNSTAR*RSSCSLRSASS Trigger: GCTAGAAGCTGAGCGGAGACTGCAGGAAGAGCGCCAGCGAGCTGTGCTGTTGGAACAGCACCTGGAGAAGAT 58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000135986.9 ENSMUST00000142783.2 |
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| CDS CCA 72 bp | CTGGGCAGGAAGCACCTGGCATTCAGCTCCTGTATCTaGGACTCCATGGGCATATCGCAGAGCTGTGTGGAG | + |
|
Preference number: 6 (lower is better) Translates to: LGRKHLAFSSCI*DSMGISQSCVE Trigger: CTCCACACAGCTCTGCGATATGCCCATGGAGTCCCAGATACAGGAGCTGAATGCCAGGTGCTTCCTGCCCAG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000142783.2 |
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| CDS CAA 72 bp | GACTGGATCTGGTTGCGCAGGTCACTCATCTTCAGGTaGGTGGCTGCCAGCCTGTCCTGCAGAGCTTTCACC | + |
|
Preference number: 6 (lower is better) Translates to: DWIWLRRSLIFR*VAASLSCRAFT Trigger: GGTGAAAGCTCTGCAGGACAGGCTGGCAGCCACCAACCTGAAGATGAGTGACCTGCGCAACCAGATCCAGTC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000135986.9 |
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| CDS CAA 72 bp | GGCCTTCATTTCTGCAGCTTGTGCCTGCCAGCCTTTTaGTTCTGGGGAGTCCGAGAACCTGGGCGATGTCCC | + |
|
Preference number: 6 (lower is better) Translates to: GLHFCSLCLPAF*FWGVREPGRCP Trigger: GGGACATCGCCCAGGTTCTCGGACTCCCCAGAACAAAAAGGCTGGCAGGCACAAGCTGCAGAAATGAAGGCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000135986.9 ENSMUST00000142783.2 ENSMUST00000155511.8 |
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| CDS CAA 90 bp | TCCATCTGCTTCTGTAACCTTCGGTGCTGTAGCTCCTGCATGGCCTaGAACTGGAGTCGCAGAGTATCTGCCGAGCTCTCATCAGCCGCC | + |
|
Preference number: 6 (lower is better) Translates to: SICFCNLRCCSSCMA*NWSRRVSAELSSAA Trigger: GGCGGCTGATGAGAGCTCGGCAGATACTCTGCGACTCCAGTTCAAGGCCATGCAGGAGCTACAGCACCGAAGGTTACAGAAGCAGATGGA 57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000135986.9 |
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| CDS CAA 90 bp | GTTGTCATCTGGCTCCTGAGGGTCTTCACCTCGCTGGACAGCACCTaGTTGCGAGACCTCATGCCCTCGAACTTCTTTCTCAGCTCCTCC | + |
|
Preference number: 6 (lower is better) Translates to: VVIWLLRVFTSLDST*LRDLMPSNFFLSSS Trigger: GGAGGAGCTGAGAAAGAAGTTCGAGGGCATGAGGTCTCGCAACAAGGTGCTGTCCAGCGAGGTGAAGACCCTCAGGAGCCAGATGACAAC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000135986.9 |
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| CDS GCA 72 bp | TCACTCATCTTCAGGTTGGTGGCTGCCAGCCTGTCCTaGAGAGCTTTCACCTCTGGGGTCTCCAGCAAAGCT | + |
|
Preference number: 6 (lower is better) Translates to: SLIFRLVAASLS*RAFTSGVSSKA Trigger: AGCTTTGCTGGAGACCCCAGAGGTGAAAGCTCTGCAGGACAGGCTGGCAGCCACCAACCTGAAGATGAGTGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000135986.9 |
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| CDS GCA 72 bp | TCACCTCGCTGGACAGCACCTTGTTGCGAGACCTCATaGCCTCGAACTTCTTTCTCAGCTCCTCCAGCTCTG | + |
|
Preference number: 6 (lower is better) Translates to: SPRWTAPCCETS*PRTSFSAPPAL Trigger: CAGAGCTGGAGGAGCTGAGAAAGAAGTTCGAGGGCATGAGGTCTCGCAACAAGGTGCTGTCCAGCGAGGTGA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000135986.9 |
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| CDS CCA 72 bp | TCTCTACCCTTTCCAGAAGGCTGGGCAGGAAGCACCTaGCATTCAGCTCCTGTATCTGGGACTCCATGGGCA | + |
|
Preference number: 6 (lower is better) Translates to: SLPFPEGWAGST*HSAPVSGTPWA Trigger: TGCCCATGGAGTCCCAGATACAGGAGCTGAATGCCAGGTGCTTCCTGCCCAGCCTTCTGGAAAGGGTAGAGA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000142783.2 |
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| CDS CCA 72 bp | GCCTCCATCCAGGAGTCTCTACCCTTTCCAGAAGGCTaGGCAGGAAGCACCTGGCATTCAGCTCCTGTATCT | + |
|
Preference number: 6 (lower is better) Translates to: ASIQESLPFPEG*AGSTWHSAPVS Trigger: AGATACAGGAGCTGAATGCCAGGTGCTTCCTGCCCAGCCTTCTGGAAAGGGTAGAGACTCCTGGATGGAGGC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000142783.2 |
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| CDS CAA 72 bp | CTCCTGAGGGTCTTCACCTCGCTGGACAGCACCTTGTaGCGAGACCTCATGCCCTCGAACTTCTTTCTCAGC | + |
|
Preference number: 6 (lower is better) Translates to: LLRVFTSLDSTL*RDLMPSNFFLS Trigger: GCTGAGAAAGAAGTTCGAGGGCATGAGGTCTCGCAACAAGGTGCTGTCCAGCGAGGTGAAGACCCTCAGGAG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000135986.9 |
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| CDS GCA 72 bp | AGTTGGTGTTCCAGCTCCTGGATGCGATTGGTCAGCTaGTTTATCCTGACCTTTGCGCTCTCTGACTCGGCC | + |
|
Preference number: 6 (lower is better) Translates to: SWCSSSWMRLVS*FILTFALSDSA Trigger: GGCCGAGTCAGAGAGCGCAAAGGTCAGGATAAAGCAGCTGACCAATCGCATCCAGGAGCTGGAACACCAACT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000135986.9 |
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| CDS GCA 72 bp | GACGCTGTCCCAGTTGCTTCTCAAGATCTCGGACCCTaGTCTGCAGCACTAGAATTTGTTGAGCCCTTCCCC | + |
|
Preference number: 6 (lower is better) Translates to: DAVPVASQDLGP*SAALEFVEPFP Trigger: GGGGAAGGGCTCAACAAATTCTAGTGCTGCAGAGCAGGGTCCGAGATCTTGAGAAGCAACTGGGACAGCGTC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000135986.9 |
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| CDS GCA 72 bp | AGCTGGTCCATAAGGGCATCAATCAGCTCATCGTCATaGCTGCCCTTCTCCACCAGGGTTGTCATCTGGCTC | + |
|
Preference number: 6 (lower is better) Translates to: SWSIRASISSSS*LPFSTRVVIWL Trigger: GAGCCAGATGACAACCCTGGTGGAGAAGGGCAGGCATGACGATGAGCTGATTGATGCCCTTATGGACCAGCT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000135986.9 |
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| CDS TCA 72 bp | ATTGGTCAGCTGCTTTATCCTGACCTTTGCGCTCTCTaGCTCGGCCATCAGCCCCCGGTTCTTTTTGGACAG | + |
|
Preference number: 6 (lower is better) Translates to: IGQLLYPDLCAL*LGHQPPVLFGQ Trigger: CTGTCCAAAAAGAACCGGGGGCTGATGGCCGAGTCAGAGAGCGCAAAGGTCAGGATAAAGCAGCTGACCAAT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000135986.9 |
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| CDS GCA 72 bp | TCCATCTGCTTCTGTAACCTTCGGTGCTGTAGCTCCTaGATGGCCTTGAACTGGAGTCGCAGAGTATCTGCC | + |
|
Preference number: 6 (lower is better) Translates to: SICFCNLRCCSS*MALNWSRRVSA Trigger: GGCAGATACTCTGCGACTCCAGTTCAAGGCCATGCAGGAGCTACAGCACCGAAGGTTACAGAAGCAGATGGA 54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000135986.9 |
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| CDS CCA 72 bp | AGCACCTGGCATTCAGCTCCTGTATCTGGGACTCCATaGGCATATCGCAGAGCTGTGTGGAGGATGAGTCTT | + |
|
Preference number: 6 (lower is better) Translates to: STWHSAPVSGTP*AYRRAVWRMSL Trigger: AAGACTCATCCTCCACACAGCTCTGCGATATGCCCATGGAGTCCCAGATACAGGAGCTGAATGCCAGGTGCT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000142783.2 |
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| CDS CAA 90 bp | GAGGATGAGTCTTTCTTGGCACTTCCAGCTGAGTTAGGCTTGGTGTaGGCAGCAGGAGGCCCTGGCTTGTTCTTAGTTTTCTGGGACACC | + |
|
Preference number: 6 (lower is better) Translates to: EDESFLALPAELGLV*AAGGPGLFLVFWDT Trigger: GGTGTCCCAGAAAACTAAGAACAAGCCAGGGCCTCCTGCTGCCAACACCAAGCCTAACTCAGCTGGAAGTGCCAAGAAAGACTCATCCTC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000135986.9 ENSMUST00000142783.2 |
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| CDS GCA 72 bp | TCCCTCTTTTTCTCCATCTGCTTCTGTAACCTTCGGTaGTGTAGCTCCTGCATGGCCTTGAACTGGAGTCGC | + |
|
Preference number: 6 (lower is better) Translates to: SLFFSICFCNLR*CSSCMALNWSR Trigger: GCGACTCCAGTTCAAGGCCATGCAGGAGCTACAGCACCGAAGGTTACAGAAGCAGATGGAGAAAAAGAGGGA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000135986.9 |
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| CDS GCA 72 bp | TCCTGCACACTCAGGCTGCTCAGAATGTCCTGCAGCTaGTTTAGCTGGTCCATAAGGGCATCAATCAGCTCA | + |
|
Preference number: 6 (lower is better) Translates to: SCTLRLLRMSCS*FSWSIRASISS Trigger: TGAGCTGATTGATGCCCTTATGGACCAGCTAAAGCAGCTGCAGGACATTCTGAGCAGCCTGAGTGTGCAGGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000135986.9 |
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| CDS GCA 72 bp | GATTCCTCCTGCACACTCAGGCTGCTCAGAATGTCCTaGAGCTGCTTTAGCTGGTCCATAAGGGCATCAATC | + |
|
Preference number: 6 (lower is better) Translates to: DSSCTLRLLRMS*SCFSWSIRASI Trigger: GATTGATGCCCTTATGGACCAGCTAAAGCAGCTGCAGGACATTCTGAGCAGCCTGAGTGTGCAGGAGGAATC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000135986.9 |
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| CDS CCA 72 bp | GTATCTGGGACTCCATGGGCATATCGCAGAGCTGTGTaGAGGATGAGTCTTTCTTGGCACTTCCAGCTGAGT | + |
|
Preference number: 6 (lower is better) Translates to: VSGTPWAYRRAV*RMSLSWHFQLS Trigger: ACTCAGCTGGAAGTGCCAAGAAAGACTCATCCTCCACACAGCTCTGCGATATGCCCATGGAGTCCCAGATAC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000135986.9 ENSMUST00000142783.2 |
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| CDS CAA 72 bp | GATGAGTCTTTCTTGGCACTTCCAGCTGAGTTAGGCTaGGTGTTGGCAGCAGGAGGCCCTGGCTTGTTCTTA | + |
|
Preference number: 6 (lower is better) Translates to: DESFLALPAELG*VLAAGGPGLFL Trigger: TAAGAACAAGCCAGGGCCTCCTGCTGCCAACACCAAGCCTAACTCAGCTGGAAGTGCCAAGAAAGACTCATC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000135986.9 ENSMUST00000142783.2 |
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| CDS CAA 90 bp | TGTGTGGAGGATGAGTCTTTCTTGGCACTTCCAGCTGAGTTAGGCTaGGTGTTGGCAGCAGGAGGCCCTGGCTTGTTCTTAGTTTTCTGG | + |
|
Preference number: 6 (lower is better) Translates to: CVEDESFLALPAELG*VLAAGGPGLFLVFW Trigger: CCAGAAAACTAAGAACAAGCCAGGGCCTCCTGCTGCCAACACCAAGCCTAACTCAGCTGGAAGTGCCAAGAAAGACTCATCCTCCACACA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000135986.9 ENSMUST00000142783.2 |
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| CDS TCA 72 bp | TTTTCTCCTGTGCTGTCATCTTCCTTGAGTCTGAACTaGGAGGCACCTCAGAGCTCGATGAACCTGCAGGCT | + |
|
Preference number: 6 (lower is better) Translates to: FSPVLSSSLSLN*EAPQSSMNLQA Trigger: AGCCTGCAGGTTCATCGAGCTCTGAGGTGCCTCTCAGTTCAGACTCAAGGAAGATGACAGCACAGGAGAAAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000135986.9 |
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| CDS CAA 72 bp | TCTTTCTTGGCACTTCCAGCTGAGTTAGGCTTGGTGTaGGCAGCAGGAGGCCCTGGCTTGTTCTTAGTTTTC | + |
|
Preference number: 6 (lower is better) Translates to: SFLALPAELGLV*AAGGPGLFLVF Trigger: GAAAACTAAGAACAAGCCAGGGCCTCCTGCTGCCAACACCAAGCCTAACTCAGCTGGAAGTGCCAAGAAAGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000135986.9 ENSMUST00000142783.2 |
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| CDS GCA 72 bp | TTCTCATCGACTGTCTCCCGGAGCTCACTGCGAAGATaGTGGATTTCATCTTCCAACACCCTCTTCTCAAAT | + |
|
Preference number: 6 (lower is better) Translates to: FSSTVSRSSLRR*WISSSNTLFSN Trigger: ATTTGAGAAGAGGGTGTTGGAAGATGAAATCCAGCATCTTCGCAGTGAGCTCCGGGAGACAGTCGATGAGAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000135986.9 |
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| CDS CCA 72 bp | TCATCGACTGTCTCCCGGAGCTCACTGCGAAGATGCTaGATTTCATCTTCCAACACCCTCTTCTCAAATATG | + |
|
Preference number: 6 (lower is better) Translates to: SSTVSRSSLRRC*ISSSNTLFSNM Trigger: CATATTTGAGAAGAGGGTGTTGGAAGATGAAATCCAGCATCTTCGCAGTGAGCTCCGGGAGACAGTCGATGA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000135986.9 |
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