Pregenerated sensors for CCDC127 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000021578Ensembl transcript IDs: ENSMUST00000022063.14, ENSMUST00000159931.2, ENSMUST00000160021.8, ENSMUST00000162376.2, ENSMUST00000162672.8
Found 182 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | CAGCACCTCTGCAGGTCTGTTGCCCTTCACTCCGGGCAGACAGCCTaGGCCCTGGGCAGCTCCTACAAGTTCTTGGCCTGGCTGGGCCAG | + |
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Preference number: 1 (lower is better) Translates to: QHLCRSVALHSGQTA*ALGSSYKFLAWLGQ Trigger: CTGGCCCAGCCAGGCCAAGAACTTGTAGGAGCTGCCCAGGGCTCAGGCTGTCTGCCCGGAGTGAAGGGCAACAGACCTGCAGAGGTGCTG 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022063.14 |
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| 3UTR GCA 90 bp | GTGCAGGCCCTGAAGCCATTAGGCCCAGCACCTCTGCAGGTCTGTTaGCCTTCACTCCGGGCAGACAGCCTGAGCCCTGGGCAGCTCCTA | + |
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Preference number: 1 (lower is better) Translates to: VQALKPLGPAPLQVC*PSLRADSLSPGQLL Trigger: TAGGAGCTGCCCAGGGCTCAGGCTGTCTGCCCGGAGTGAAGGGCAACAGACCTGCAGAGGTGCTGGGCCTAATGGCTTCAGGGCCTGCAC 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022063.14 |
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| 3UTR GCA 90 bp | AGGGCACTAGGAAGGTGGGGCCGTACCAAGGTGCTGGCCAGGACCTaGTGCCAGCTCCAAGGACAGCCCTGTTCAGCTGGGCACCCCATT | + |
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Preference number: 1 (lower is better) Translates to: RALGRWGRTKVLART*CQLQGQPCSAGHPI Trigger: AATGGGGTGCCCAGCTGAACAGGGCTGTCCTTGGAGCTGGCAGCAGGTCCTGGCCAGCACCTTGGTACGGCCCCACCTTCCTAGTGCCCT 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000022063.14 |
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| 3UTR GCA 90 bp | GCACTAGGAAGGTGGGGCCGTACCAAGGTGCTGGCCAGGACCTGCTaGCAGCTCCAAGGACAGCCCTGTTCAGCTGGGCACCCCATTGAA | + |
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Preference number: 1 (lower is better) Translates to: ALGRWGRTKVLARTC*QLQGQPCSAGHPIE Trigger: TTCAATGGGGTGCCCAGCTGAACAGGGCTGTCCTTGGAGCTGGCAGCAGGTCCTGGCCAGCACCTTGGTACGGCCCCACCTTCCTAGTGC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000022063.14 |
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| 3UTR CCA 90 bp | TCTGCAGGTCTGTTGCCCTTCACTCCGGGCAGACAGCCTGAGCCCTaGGCAGCTCCTACAAGTTCTTGGCCTGGCTGGGCCAGGCAACCT | + |
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Preference number: 1 (lower is better) Translates to: SAGLLPFTPGRQPEP*AAPTSSWPGWARQP Trigger: AGGTTGCCTGGCCCAGCCAGGCCAAGAACTTGTAGGAGCTGCCCAGGGCTCAGGCTGTCTGCCCGGAGTGAAGGGCAACAGACCTGCAGA 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022063.14 |
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| 3UTR CCA 90 bp | GACGTACAGGTGCAGCAATGTCCTTGTGGGAGGGCACTAGGAAGGTaGGGCCGTACCAAGGTGCTGGCCAGGACCTGCTGCCAGCTCCAA | + |
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Preference number: 1 (lower is better) Translates to: DVQVQQCPCGRALGR*GRTKVLARTCCQLQ Trigger: TTGGAGCTGGCAGCAGGTCCTGGCCAGCACCTTGGTACGGCCCCACCTTCCTAGTGCCCTCCCACAAGGACATTGCTGCACCTGTACGTC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022063.14 |
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| 3UTR GCA 90 bp | CTTCCCTCAGCTGACCTCACTCACCTTGCCCACCAAGGCCTTCGATaGTCCCCCAACTTGTGCCCCAGATCCAGAGGGCGAGGATCTTCT | + |
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Preference number: 1 (lower is better) Translates to: LPSADLTHLAHQGLR*SPNLCPRSRGRGSS Trigger: AGAAGATCCTCGCCCTCTGGATCTGGGGCACAAGTTGGGGGAGCATCGAAGGCCTTGGTGGGCAAGGTGAGTGAGGTCAGCTGAGGGAAG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000022063.14 |
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| 3UTR GCA 90 bp | CTGAGGCCAAACACTGACCACCCTGAAGACCTGCGTGATCGTGCCTaGAAGGCCTGCCTGGAGGCCTGTATGCAGGGCATAGCTGACCAT | + |
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Preference number: 1 (lower is better) Translates to: LRPNTDHPEDLRDRA*KACLEACMQGIADH Trigger: ATGGTCAGCTATGCCCTGCATACAGGCCTCCAGGCAGGCCTTGCAGGCACGATCACGCAGGTCTTCAGGGTGGTCAGTGTTTGGCCTCAG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022063.14 |
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| 3UTR CCA 90 bp | TACCTGCTAGAGCAGGCAGATGTAACCCGTGCTCTGCTGAGTCACTaGCCACTGGAGGAGTTCCGGCTGGCTGTGCTACTGAGGCCAAAC | + |
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Preference number: 1 (lower is better) Translates to: YLLEQADVTRALLSH*PLEEFRLAVLLRPN Trigger: GTTTGGCCTCAGTAGCACAGCCAGCCGGAACTCCTCCAGTGGCCAGTGACTCAGCAGAGCACGGGTTACATCTGCCTGCTCTAGCAGGTA 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022063.14 |
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| 3UTR GCA 90 bp | AACCCGCTCTCAGGCAGTGCTCTCCGGCGCCTTTTTGCTGCACTCTaGGAACTCCCTAGGCTTCGCCATATTGAGTTCCCAGTACCAAAG | + |
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Preference number: 1 (lower is better) Translates to: NPLSGSALRRLFAAL*ELPRLRHIEFPVPK Trigger: CTTTGGTACTGGGAACTCAATATGGCGAAGCCTAGGGAGTTCGCAGAGTGCAGCAAAAAGGCGCCGGAGAGCACTGCCTGAGAGCGGGTT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000022063.14 ENSMUST00000160021.8 |
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| 3UTR GCA 90 bp | GTGCTGGAATGGCAGCTCTCATCCAGACAGACCACACCAGGCCAATaGAGTTCCATGTGGCAGAGGTTTATTGGGGTGGGTTGGGGTGGA | + |
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Preference number: 1 (lower is better) Translates to: VLEWQLSSRQTTPGQ*SSMWQRFIGVGWGG Trigger: TCCACCCCAACCCACCCCAATAAACCTCTGCCACATGGAACTGCATTGGCCTGGTGTGGTCTGTCTGGATGAGAGCTGCCATTCCAGCAC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000022063.14 |
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| 3UTR CCA 90 bp | TTCCATATAGATCCTACCCACCTAGCAGTGCTTGGGGCTCCACCATaGCAACGCATTCCCATCTCTGCCGATGGCAGGGTCTCTGGGAGA | + |
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Preference number: 1 (lower is better) Translates to: FHIDPTHLAVLGAPP*QRIPISADGRVSGR Trigger: TCTCCCAGAGACCCTGCCATCGGCAGAGATGGGAATGCGTTGCCATGGTGGAGCCCCAAGCACTGCTAGGTGGGTAGGATCTATATGGAA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022063.14 |
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| 3UTR GCA 90 bp | GAACTCCCTAGGCTTCGCCATATTGAGTTCCCAGTACCAAAGGACTaGTACCCCGAGGGTGCCATCTACCCTCAGGATGAACTGTCAGTG | + |
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Preference number: 1 (lower is better) Translates to: ELPRLRHIEFPVPKD*YPEGAIYPQDELSV Trigger: CACTGACAGTTCATCCTGAGGGTAGATGGCACCCTCGGGGTAGCAGTCCTTTGGTACTGGGAACTCAATATGGCGAAGCCTAGGGAGTTC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000022063.14 ENSMUST00000160021.8 ENSMUST00000162672.8 |
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| 3UTR CCA 90 bp | GTCATGGATTACCTTCCATATAGATCCTACCCACCTAGCAGTGCTTaGGGCTCCACCATGGCAACGCATTCCCATCTCTGCCGATGGCAG | + |
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Preference number: 1 (lower is better) Translates to: VMDYLPYRSYPPSSA*GSTMATHSHLCRWQ Trigger: CTGCCATCGGCAGAGATGGGAATGCGTTGCCATGGTGGAGCCCCAAGCACTGCTAGGTGGGTAGGATCTATATGGAAGGTAATCCATGAC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022063.14 |
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| 3UTR CCA 90 bp | ACAGACCACACCAGGCCAATGCAGTTCCATGTGGCAGAGGTTTATTaGGGTGGGTTGGGGTGGACAGAGACAAAGGGAGAAAAGAGAGAA | + |
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Preference number: 1 (lower is better) Translates to: TDHTRPMQFHVAEVY*GGLGWTETKGEKRE Trigger: TTCTCTCTTTTCTCCCTTTGTCTCTGTCCACCCCAACCCACCCCAATAAACCTCTGCCACATGGAACTGCATTGGCCTGGTGTGGTCTGT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000022063.14 |
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| 3UTR TCA 90 bp | GGTTATGGAGGCCACATTCAGGCTGCTGGACTTCCTTCTCAGCCCTaGAAACCATTACTGGTCCTATTGTCATCAGAGTGGCAGCACTCT | + |
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Preference number: 1 (lower is better) Translates to: GYGGHIQAAGLPSQP*KPLLVLLSSEWQHS Trigger: AGAGTGCTGCCACTCTGATGACAATAGGACCAGTAATGGTTTTCAGGGCTGAGAAGGAAGTCCAGCAGCCTGAATGTGGCCTCCATAACC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000022063.14 ENSMUST00000160021.8 |
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| 3UTR TCA 90 bp | CCTTACCTCTATTGCCTGGGAGCTCAGCCAGATGAACCAGCTCACTaGGCTAAGTGTGGCTTTCTCTACACTCACTGGGAAGATCCAAAC | + |
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Preference number: 1 (lower is better) Translates to: PYLYCLGAQPDEPAH*AKCGFLYTHWEDPN Trigger: GTTTGGATCTTCCCAGTGAGTGTAGAGAAAGCCACACTTAGCTCAGTGAGCTGGTTCATCTGGCTGAGCTCCCAGGCAATAGAGGTAAGG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022063.14 |
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| 3UTR TCA 90 bp | TCCTGGAATGGCCACTGTGCCTCTTACCTCTCTCTTTCTCTATTATaGCTCTCCTATAAAGCTGGCACCACGGGAACCTATGAGCTGCCC | + |
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Preference number: 1 (lower is better) Translates to: SWNGHCASYLSLSLL*LSYKAGTTGTYELP Trigger: GGGCAGCTCATAGGTTCCCGTGGTGCCAGCTTTATAGGAGAGTCATAATAGAGAAAGAGAGAGGTAAGAGGCACAGTGGCCATTCCAGGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022063.14 |
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| 3UTR CCA 90 bp | CAATGCTCCCTGGGATTCCACAGTGTAACCCCTGGTGGCTCCATCTaGCTCCCTCTAGATTCTTCTACATGCCTGTTCTCTGCTGATTTT | + |
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Preference number: 1 (lower is better) Translates to: QCSLGFHSVTPGGSI*LPLDSSTCLFSADF Trigger: AAAATCAGCAGAGAACAGGCATGTAGAAGAATCTAGAGGGAGCCAGATGGAGCCACCAGGGGTTACACTGTGGAATCCCAGGGAGCATTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022063.14 |
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| 3UTR TCA 90 bp | AGTACCAAAGGACTGCTACCCCGAGGGTGCCATCTACCCTCAGGATaGACTGTCAGTGTCCAAATTCGACCAACAGAAATACGACGTGAT | + |
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Preference number: 1 (lower is better) Translates to: STKGLLPRGCHLPSG*TVSVQIRPTEIRRD Trigger: ATCACGTCGTATTTCTGTTGGTCGAATTTGGACACTGACAGTTCATCCTGAGGGTAGATGGCACCCTCGGGGTAGCAGTCCTTTGGTACT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000022063.14 ENSMUST00000160021.8 ENSMUST00000162672.8 |
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| 3UTR GCA 90 bp | TGGGCATGGGATTCCATTACAGATGGTCATGAACCACTATGTGGTTaGTGGGAATTGAACGCTGGAACTCTGGAAGAGCACTCAGTGCTC | + |
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Preference number: 1 (lower is better) Translates to: WAWDSITDGHEPLCG*WELNAGTLEEHSVL Trigger: GAGCACTGAGTGCTCTTCCAGAGTTCCAGCGTTCAATTCCCAGCAACCACATAGTGGTTCATGACCATCTGTAATGGAATCCCATGCCCA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022063.14 |
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| 3UTR TCA 90 bp | AGGATGAACTGTCAGTGTCCAAATTCGACCAACAGAAATACGACGTaGTTGCAGAGGATCTTCGAGCAGTACTGCTTCGAGCTAACCGGG | + |
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Preference number: 1 (lower is better) Translates to: RMNCQCPNSTNRNTT*LQRIFEQYCFELTG Trigger: CCCGGTTAGCTCGAAGCAGTACTGCTCGAAGATCCTCTGCAATCACGTCGTATTTCTGTTGGTCGAATTTGGACACTGACAGTTCATCCT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000022063.14 ENSMUST00000160021.8 ENSMUST00000162672.8 |
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| 3UTR GCA 90 bp | TGCAAGCTGTCCTCTGACCTCCACATGCATACTGTGGCACACACATaGCTGTGCTTGGGTACACACACATACACATGTACACACACAAAT | + |
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Preference number: 1 (lower is better) Translates to: CKLSSDLHMHTVAHT*LCLGTHTYTCTHTN Trigger: ATTTGTGTGTGTACATGTGTATGTGTGTGTACCCAAGCACAGGCATGTGTGTGCCACAGTATGCATGTGGAGGTCAGAGGACAGCTTGCA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022063.14 |
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| 3UTR TCA 90 bp | CAGTTACTGCCAAACTGGTACCTAAGGACCAAAATAGCAGTCAGATaGCCACAAGGGCCAGTTTACCACTTTCTGGGCTTGAGTCCAGAA | + |
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Preference number: 1 (lower is better) Translates to: QLLPNWYLRTKIAVR*PQGPVYHFLGLSPE Trigger: TTCTGGACTCAAGCCCAGAAAGTGGTAAACTGGCCCTTGTGGTCATCTGACTGCTATTTTGGTCCTTAGGTACCAGTTTGGCAGTAACTG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022063.14 |
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| 3UTR TCA 90 bp | ACTCACATTATAAAAGGAAAGAATTACCGCATGCAAGCTGTCCTCTaGCCTCCACATGCATACTGTGGCACACACATGCCTGTGCTTGGG | + |
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Preference number: 1 (lower is better) Translates to: THIIKGKNYRMQAVL*PPHAYCGTHMPVLG Trigger: CCCAAGCACAGGCATGTGTGTGCCACAGTATGCATGTGGAGGTCAGAGGACAGCTTGCATGCGGTAATTCTTTCCTTTTATAATGTGAGT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022063.14 |
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| 3UTR GCA 90 bp | TTCCCAGTGCTGGTAACTAGCAAGAGTGATTCACCATACCTAAACTaGTTACAGACTATGAGTGACTTCTACCACTTGCCTTCCTGTGGG | + |
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Preference number: 1 (lower is better) Translates to: FPVLVTSKSDSPYLN*LQTMSDFYHLPSCG Trigger: CCCACAGGAAGGCAAGTGGTAGAAGTCACTCATAGTCTGTAAGCAGTTTAGGTATGGTGAATCACTCTTGCTAGTTACCAGCACTGGGAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022063.14 |
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| 3UTR CCA 90 bp | TATAAGGCACACGAATCACTGCTCCTCCTCAGAATGGCTGAGGCCTaGCCCTTTGCAACTCCTTTGAGAAACAAATCATCACGTAAGAAA | + |
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Preference number: 1 (lower is better) Translates to: YKAHESLLLLRMAEA*PFATPLRNKSSRKK Trigger: TTTCTTACGTGATGATTTGTTTCTCAAAGGAGTTGCAAAGGGCCAGGCCTCAGCCATTCTGAGGAGGAGCAGTGATTCGTGTGCCTTATA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022063.14 |
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| 3UTR CCA 90 bp | ACATTCAGGCTGCTGGACTTCCTTCTCAGCCCTGAAAACCATTACTaGTCCTATTGTCATCAGAGTGGCAGCACTCTCTTTCAAGCTAAT | + |
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Preference number: 1 (lower is better) Translates to: TFRLLDFLLSPENHY*SYCHQSGSTLFQAN Trigger: ATTAGCTTGAAAGAGAGTGCTGCCACTCTGATGACAATAGGACCAGTAATGGTTTTCAGGGCTGAGAAGGAAGTCCAGCAGCCTGAATGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000022063.14 ENSMUST00000160021.8 |
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| 3UTR CCA 90 bp | TCTACCTTTTATTTAGGCTCACAGGTAAGGGTGGGAAATGGACTCTaGGAATGTGATTGCCATGGTAACAGATGTGCATGTCTCTGTTCC | + |
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Preference number: 1 (lower is better) Translates to: STFYLGSQVRVGNGL*ECDCHGNRCACLCS Trigger: GGAACAGAGACATGCACATCTGTTACCATGGCAATCACATTCCCAGAGTCCATTTCCCACCCTTACCTGTGAGCCTAAATAAAAGGTAGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000022063.14 ENSMUST00000160021.8 |
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| 3UTR GCA 90 bp | GTAACCCCTGGTGGCTCCATCTGGCTCCCTCTAGATTCTTCTACATaGCTGTTCTCTGCTGATTTTATCTTTCTTGCTAACACAAATCTT | + |
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Preference number: 1 (lower is better) Translates to: VTPGGSIWLPLDSST*LFSADFIFLANTNL Trigger: AAGATTTGTGTTAGCAAGAAAGATAAAATCAGCAGAGAACAGGCATGTAGAAGAATCTAGAGGGAGCCAGATGGAGCCACCAGGGGTTAC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000022063.14 |
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| 3UTR TCA 90 bp | GGCTTTGTTTCCACCTGCAGCAGATTTTTATCGTCTTTTGGTGACTaGGGACATCTAGTCACTGAAATATGCCCAGTGTTTCTTGGCATA | + |
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Preference number: 1 (lower is better) Translates to: GFVSTCSRFLSSFGD*GHLVTEICPVFLGI Trigger: TATGCCAAGAAACACTGGGCATATTTCAGTGACTAGATGTCCTCAGTCACCAAAAGACGATAAAAATCTGCTGCAGGTGGAAACAAAGCC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000022063.14 |
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| 3UTR GCA 90 bp | TGTCATCAGAGTGGCAGCACTCTCTTTCAAGCTAATTCTATCCTTTaGTGTTCTCACAGTCAATATTCTGATGGTTCTGAGATCAGGTGC | + |
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Preference number: 1 (lower is better) Translates to: CHQSGSTLFQANSIL*CSHSQYSDGSEIRC Trigger: GCACCTGATCTCAGAACCATCAGAATATTGACTGTGAGAACAGCAAAGGATAGAATTAGCTTGAAAGAGAGTGCTGCCACTCTGATGACA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000022063.14 ENSMUST00000160021.8 |
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| 3UTR CAA 90 bp | GGTGCAGGCCCTGAAGCCATTAGGCCCAGCACCTCTGCAGGTCTGTaGCCCTTCACTCCGGGCAGACAGCCTGAGCCCTGGGCAGCTCCT | + |
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Preference number: 2 (lower is better) Translates to: GAGPEAIRPSTSAGL*PFTPGRQPEPWAAP Trigger: AGGAGCTGCCCAGGGCTCAGGCTGTCTGCCCGGAGTGAAGGGCAACAGACCTGCAGAGGTGCTGGGCCTAATGGCTTCAGGGCCTGCACC 66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022063.14 |
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| 3UTR-3UTR CCA 90 bp | GCCCTGAAGCCATTAGGCCCAGCACCTCTGCAGGTCTGTTGCCCTTCACTCCGGTACAAGTTCTTGGCCTaGCTGGGCCAGGCAACCTTA | + |
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Preference number: 2 (lower is better) Translates to: ALKPLGPAPLQVCCPSLRYKFLA*LGQATL Trigger: TAAGGTTGCCTGGCCCAGCCAGGCCAAGAACTTGTA...CCGGAGTGAAGGGCAACAGACCTGCAGAGGTGCTGGGCCTAATGGCTTCAGGGC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022063.14 |
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| 3UTR CAA 90 bp | TTCTGGGCCTTAGCCCTTGCAGCCAGCTCCAGCAGTTCAAGTTTCTaGGAAACCCGCTCTCAGGCAGTGCTCTCCGGCGCCTTTTTGCTG | + |
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Preference number: 2 (lower is better) Translates to: FWALALAASSSSSSF*ETRSQAVLSGAFLL Trigger: CAGCAAAAAGGCGCCGGAGAGCACTGCCTGAGAGCGGGTTTCCAAGAAACTTGAACTGCTGGAGCTGGCTGCAAGGGCTAAGGCCCAGAA 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000022063.14 ENSMUST00000160021.8 |
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| 3UTR CAA 90 bp | GGCGCCTTTTTGCTGCACTCTGCGAACTCCCTAGGCTTCGCCATATaGAGTTCCCAGTACCAAAGGACTGCTACCCCGAGGGTGCCATCT | + |
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Preference number: 2 (lower is better) Translates to: GAFLLHSANSLGFAI*SSQYQRTATPRVPS Trigger: AGATGGCACCCTCGGGGTAGCAGTCCTTTGGTACTGGGAACTCAATATGGCGAAGCCTAGGGAGTTCGCAGAGTGCAGCAAAAAGGCGCC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000022063.14 ENSMUST00000160021.8 ENSMUST00000162672.8 |
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| 3UTR-3UTR CCA 90 bp | GCGAACTCCCTAGGCTTCGCCATATTGAGTTCCCAGTACCAAAGGACTGCTACCCCACAGTGTAACCCCTaGTGGCTCCATCTGGCTCCC | + |
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Preference number: 2 (lower is better) Translates to: ANSLGFAILSSQYQRTATPQCNP*WLHLAP Trigger: GGGAGCCAGATGGAGCCACCAGGGGTTACACTGTGG...GGTAGCAGTCCTTTGGTACTGGGAACTCAATATGGCGAAGCCTAGGGAGTTCGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000022063.14 |
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| 3UTR CAA 90 bp | AGTTTCTTGGAAACCCGCTCTCAGGCAGTGCTCTCCGGCGCCTTTTaGCTGCACTCTGCGAACTCCCTAGGCTTCGCCATATTGAGTTCC | + |
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Preference number: 2 (lower is better) Translates to: SFLETRSQAVLSGAF*LHSANSLGFAILSS Trigger: GGAACTCAATATGGCGAAGCCTAGGGAGTTCGCAGAGTGCAGCAAAAAGGCGCCGGAGAGCACTGCCTGAGAGCGGGTTTCCAAGAAACT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000022063.14 ENSMUST00000160021.8 |
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| 3UTR CAA 90 bp | CTCCTACAAGTTCTTGGCCTGGCTGGGCCAGGCAACCTTAGAAAGTaGGAGGTAGTACACAATGTCCGGCTGCATGCTGGCCATGTGCAG | + |
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Preference number: 2 (lower is better) Translates to: LLQVLGLAGPGNLRK*EVVHNVRLHAGHVQ Trigger: CTGCACATGGCCAGCATGCAGCCGGACATTGTGTACTACCTCCAACTTTCTAAGGTTGCCTGGCCCAGCCAGGCCAAGAACTTGTAGGAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022063.14 |
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| 3UTR-3UTR TCA 90 bp | GCCCTGAAGCCATTAGGCCCAGCACCTCTGCAGGTCTGTTGCCCTTCACTCCGGCTATGCAGTCACATGTaGCAGAGGATAGCTATGAAC | + |
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Preference number: 2 (lower is better) Translates to: ALKPLGPAPLQVCCPSLRLCSHM*QRIAMN Trigger: GTTCATAGCTATCCTCTGTCACATGTGACTGCATAG...CCGGAGTGAAGGGCAACAGACCTGCAGAGGTGCTGGGCCTAATGGCTTCAGGGC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022063.14 |
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| 3UTR CAA 90 bp | CCTGCTGCCAGCTCCAAGGACAGCCCTGTTCAGCTGGGCACCCCATaGAAGTCTTTGCTGACCTCTTTGTCACAGAAGGCAACTTTGACA | + |
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Preference number: 2 (lower is better) Translates to: PAASSKDSPVQLGTP*KSLLTSLSQKATLT Trigger: TGTCAAAGTTGCCTTCTGTGACAAAGAGGTCAGCAAAGACTTCAATGGGGTGCCCAGCTGAACAGGGCTGTCCTTGGAGCTGGCAGCAGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022063.14 |
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| 3UTR-3UTR GCA 90 bp | CACTCTGCGAACTCCCTAGGCTTCGCCATATTGAGTTCCCAGTACCAAAGGACTCAAGAGACCCCAGACTaGAGACTGCCATGGGGAGAG | + |
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Preference number: 2 (lower is better) Translates to: HSANSLGFAILSSQYQRTQETPD*RLPWGE Trigger: CTCTCCCCATGGCAGTCTGCAGTCTGGGGTCTCTTG...AGTCCTTTGGTACTGGGAACTCAATATGGCGAAGCCTAGGGAGTTCGCAGAGTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000022063.14 |
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| 3UTR-3UTR GCA 90 bp | AGGCTGTGCATTTCTAGTGCCCTGAGGTCAGTCCTGGACCAGATGATCAGGCTCAAGGCCCCACTGCACTaGTCAAAGGGTGGAAAGACT | + |
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Preference number: 2 (lower is better) Translates to: RLCISSALRSVLDQMIRLKAPLH*SKGGKT Trigger: AGTCTTTCCACCCTTTGAGCAGTGCAGTGGGGCCTT...GAGCCTGATCATCTGGTCCAGGACTGACCTCAGGGCACTAGAAATGCACAGCCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022063.14 |
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| 3UTR-3UTR GCA 90 bp | TTGCCTACCTCACAGCCCCTTGAAGACCCCACTAAGAGTGTTGGACCTAGCCAACTGCTAAGGCCCCACTaGACTGCTCAAAGGGTGGAA | + |
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Preference number: 2 (lower is better) Translates to: LPTSQPLEDPTKSVGPSQLLRPH*TAQRVE Trigger: TTCCACCCTTTGAGCAGTGCAGTGGGGCCTTAGCAG...TTGGCTAGGTCCAACACTCTTAGTGGGGTCTTCAAGGGGCTGTGAGGTAGGCAA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000022063.14 |
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| 3UTR-3UTR CCA 90 bp | GATTACCTTCCATATAGATCCTACCCACCTAGCAGTGCTTGGGGCTCCACCATGACCACACTGCCCACTTaGAGGTGCTGGACCTCAGTG | + |
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Preference number: 2 (lower is better) Translates to: DYLPYRSYPPSSAWGSTMTTLPT*RCWTSV Trigger: CACTGAGGTCCAGCACCTCCAAGTGGGCAGTGTGGT...CATGGTGGAGCCCCAAGCACTGCTAGGTGGGTAGGATCTATATGGAAGGTAATC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022063.14 |
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| 3UTR-3UTR CCA 90 bp | GATTACCTTCCATATAGATCCTACCCACCTAGCAGTGCTTGGGGCTCCACCATGTGTCCCACTCCCAGCTaGTCCAGGAGAACCTGGACA | + |
|
Preference number: 2 (lower is better) Translates to: DYLPYRSYPPSSAWGSTMCPTPS*SRRTWT Trigger: TGTCCAGGTTCTCCTGGACCAGCTGGGAGTGGGACA...CATGGTGGAGCCCCAAGCACTGCTAGGTGGGTAGGATCTATATGGAAGGTAATC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022063.14 |
||
| 3UTR-3UTR CCA 90 bp | GATCTTCGAGCAGTACTGCTTCGAGCTAACCGGGAGGACATCCAGGTCTCCACCCTACTGGGCCACTTTTaGTGGCAAAGGAACAGAGTA | + |
|
Preference number: 2 (lower is better) Translates to: DLRAVLLRANREDIQVSTLLGHF*WQRNRV Trigger: TACTCTGTTCCTTTGCCACCAAAAGTGGCCCAGTAG...GGTGGAGACCTGGATGTCCTCCCGGTTAGCTCGAAGCAGTACTGCTCGAAGATC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022063.14 |
||
| 3UTR CAA 90 bp | CATGAAGACATATCCTTCTTAGCAGACTGTAACCACACTGCCCACTaGGAGGTGCTGGACCTCAGTGGACACAACCTGGTACACCTGTAC | + |
|
Preference number: 2 (lower is better) Translates to: HEDISFLADCNHTAH*EVLDLSGHNLVHLY Trigger: GTACAGGTGTACCAGGTTGTGTCCACTGAGGTCCAGCACCTCCAAGTGGGCAGTGTGGTTACAGTCTGCTAAGAAGGATATGTCTTCATG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000022063.14 ENSMUST00000160021.8 |
||
| 3UTR-3UTR CCA 90 bp | GATTACCTTCCATATAGATCCTACCCACCTAGCAGTGCTTGGGGCTCCACCATGGCAGTTCAAGTTTCTTaGAAACCCGCTCTCAGGCAG | + |
|
Preference number: 2 (lower is better) Translates to: DYLPYRSYPPSSAWGSTMAVQVS*KPALRQ Trigger: CTGCCTGAGAGCGGGTTTCCAAGAAACTTGAACTGC...CATGGTGGAGCCCCAAGCACTGCTAGGTGGGTAGGATCTATATGGAAGGTAATC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022063.14 |
||
| 3UTR-3UTR CCA 90 bp | TTCCTGATACCAACGAGCAGGACCCTAGTTTTAGTTCTCAGCATCAGAGAGGGAGGTGCTGGACCTCAGTaGACACAACCTGGTACACCT | + |
|
Preference number: 2 (lower is better) Translates to: FLIPTSRTLVLVLSIREGGAGPQ*TQPGTP Trigger: AGGTGTACCAGGTTGTGTCCACTGAGGTCCAGCACC...TCCCTCTCTGATGCTGAGAACTAAAACTAGGGTCCTGCTCGTTGGTATCAGGAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000022063.14 ENSMUST00000160021.8 |
||
| 3UTR-3UTR TCA 90 bp | AGGCTGTGCATTTCTAGTGCCCTGAGGTCAGTCCTGGACCAGATGATCAGGCTCTTAGCTCTGATGCTGTaGGGGGAAGAAATGAGAAAA | + |
|
Preference number: 2 (lower is better) Translates to: RLCISSALRSVLDQMIRLLALML*GEEMRK Trigger: TTTTCTCATTTCTTCCCCTCACAGCATCAGAGCTAA...GAGCCTGATCATCTGGTCCAGGACTGACCTCAGGGCACTAGAAATGCACAGCCT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000022063.14 |
||
| 3UTR-3UTR GCA 90 bp | TTCCTGATACCAACGAGCAGGACCCTAGTTTTAGTTCTCAGCATCAGAGAGGGACTTTTTGCTGCACTCTaGGAACTCCCTAGGCTTCGC | + |
|
Preference number: 2 (lower is better) Translates to: FLIPTSRTLVLVLSIREGLFAAL*ELPRLR Trigger: GCGAAGCCTAGGGAGTTCGCAGAGTGCAGCAAAAAG...TCCCTCTCTGATGCTGAGAACTAAAACTAGGGTCCTGCTCGTTGGTATCAGGAA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000022063.14 ENSMUST00000160021.8 |
||
| 3UTR-3UTR CCA 90 bp | CAGATGTGCATGTCTCTGTTCCCTATGGGTGACATCACTGGGTTCAGAGGCAATGCCTTCCTGTGGGAATaGAACTGCTGTGAAAGGTCA | + |
|
Preference number: 2 (lower is better) Translates to: QMCMSLFPMGDITGFRGNAFLWE*NCCERS Trigger: TGACCTTTCACAGCAGTTCCATTCCCACAGGAAGGC...ATTGCCTCTGAACCCAGTGATGTCACCCATAGGGAACAGAGACATGCACATCTG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022063.14 |
||
| 3UTR-3UTR CCA 90 bp | TTCCTGATACCAACGAGCAGGACCCTAGTTTTAGTTCTCAGCATCAGAGAGGGAGTCAGCTGGAGTTTCTaGCAGGCTGCAGTCAGTGAT | + |
|
Preference number: 2 (lower is better) Translates to: FLIPTSRTLVLVLSIREGVSWSF*QAAVSD Trigger: ATCACTGACTGCAGCCTGCCAGAAACTCCAGCTGAC...TCCCTCTCTGATGCTGAGAACTAAAACTAGGGTCCTGCTCGTTGGTATCAGGAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000022063.14 ENSMUST00000160021.8 |
||
| 3UTR CAA 90 bp | TACCCAAAGACCACTGTTTCATCCATCCAAGTGCAGTTCAGGATTTaGCTTCCCTCAGATCTTTTGACTGGGATAGGCCCCATCTGGGCA | + |
|
Preference number: 2 (lower is better) Translates to: YPKTTVSSIQVQFRI*LPSDLLTGIGPIWA Trigger: TGCCCAGATGGGGCCTATCCCAGTCAAAAGATCTGAGGGAAGCAAAATCCTGAACTGCACTTGGATGGATGAAACAGTGGTCTTTGGGTA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000022063.14 |
||
| 3UTR-3UTR TCA 90 bp | AAGTCTTTGCTGACCTCTTTGTCACAGAAGGCAACTTTGACATGGTGGTGCAGGGATGAACCAGCTCACTaGGCTAAGTGTGGCTTTCTC | + |
|
Preference number: 2 (lower is better) Translates to: KSLLTSLSQKATLTWWCRDEPAH*AKCGFL Trigger: GAGAAAGCCACACTTAGCTCAGTGAGCTGGTTCATC...CCTGCACCACCATGTCAAAGTTGCCTTCTGTGACAAAGAGGTCAGCAAAGACTT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022063.14 |
||
| 3UTR-3UTR CCA 90 bp | AAGTCTTTGCTGACCTCTTTGTCACAGAAGGCAACTTTGACATGGTGGTGCAGGTTTATTGGGGTGGGTTaGGGTGGACAGAGACAAAGG | + |
|
Preference number: 2 (lower is better) Translates to: KSLLTSLSQKATLTWWCRFIGVG*GGQRQR Trigger: CCTTTGTCTCTGTCCACCCCAACCCACCCCAATAAA...CCTGCACCACCATGTCAAAGTTGCCTTCTGTGACAAAGAGGTCAGCAAAGACTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022063.14 |
||
| 3UTR CAA 90 bp | ATAGTAAAAGTCACACAAAAAGTAATACCATGCCCGGCGTGGTGGTaGTATGCCTTTAATCCCAACACTTGGGAGGCAGAGGCAGGTGGA | + |
|
Preference number: 2 (lower is better) Translates to: IVKVTQKVIPCPAWW*YAFNPNTWEAEAGG Trigger: TCCACCTGCCTCTGCCTCCCAAGTGTTGGGATTAAAGGCATACAACCACCACGCCGGGCATGGTATTACTTTTTGTGTGACTTTTACTAT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000022063.14 |
||
| 3UTR-3UTR TCA 90 bp | CTGCCACTCTCTTCAGACACACCAGAAGTGGGCATGGGATTCCATTACAGATGGTTTCTTGGCATACTCTaGTCTGCTTTCTGCTTAGAG | + |
|
Preference number: 2 (lower is better) Translates to: LPLSSDTPEVGMGFHYRWFLGIL*SAFCLE Trigger: CTCTAAGCAGAAAGCAGATCAGAGTATGCCAAGAAA...CCATCTGTAATGGAATCCCATGCCCACTTCTGGTGTGTCTGAAGAGAGTGGCAG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022063.14 |
||
| 3UTR-3UTR GCA 90 bp | GCGAACTCCCTAGGCTTCGCCATATTGAGTTCCCAGTACCAAAGGACTGCTACCCTAGTCACTGAAATATaGCCAGTGTTTCTTGGCATA | + |
|
Preference number: 2 (lower is better) Translates to: ANSLGFAILSSQYQRTATLVTEI*PVFLGI Trigger: TATGCCAAGAAACACTGGGCATATTTCAGTGACTAG...GGTAGCAGTCCTTTGGTACTGGGAACTCAATATGGCGAAGCCTAGGGAGTTCGC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022063.14 |
||
| 3UTR-3UTR CCA 90 bp | GGAGAAGTTATTTCAGACACACCTCCCCACAGAGGATACTGGCTGAATAGTGAATTTAATCCCAACACTTaGGAGGCAGAGGCAGGTGGA | + |
|
Preference number: 2 (lower is better) Translates to: GEVISDTPPHRGYWLNSEFNPNT*EAEAGG Trigger: TCCACCTGCCTCTGCCTCCCAAGTGTTGGGATTAAA...TTCACTATTCAGCCAGTATCCTCTGTGGGGAGGTGTGTCTGAAATAACTTCTCC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022063.14 |
||
| 3UTR-3UTR CCA 90 bp | TTCCTGATACCAACGAGCAGGACCCTAGTTTTAGTTCTCAGCATCAGAGAGGGACCACACCTGAAATCCTaGTACTGCAATCTCCTCCTT | + |
|
Preference number: 2 (lower is better) Translates to: FLIPTSRTLVLVLSIREGPHLKS*YCNLLL Trigger: AAGGAGGAGATTGCAGTACCAGGATTTCAGGTGTGG...TCCCTCTCTGATGCTGAGAACTAAAACTAGGGTCCTGCTCGTTGGTATCAGGAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000022063.14 ENSMUST00000160021.8 |
||
| 3UTR-3UTR TCA 90 bp | GATTACCTTCCATATAGATCCTACCCACCTAGCAGTGCTTGGGGCTCCACCATGTGTGAGGGGAAGAAATaGGAAAATTCACCACATGTA | + |
|
Preference number: 2 (lower is better) Translates to: DYLPYRSYPPSSAWGSTMCEGKK*ENSPHV Trigger: TACATGTGGTGAATTTTCTCATTTCTTCCCCTCACA...CATGGTGGAGCCCCAAGCACTGCTAGGTGGGTAGGATCTATATGGAAGGTAATC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000022063.14 |
||
| 3UTR-3UTR CCA 90 bp | CTGAAATCCTGGTACTGCAATCTCCTCCTTAGCAACTGTACTATGAAGAAGGGTAAAGCATACTTAGGATaGAAGGCGGGCATGCCACAG | + |
|
Preference number: 2 (lower is better) Translates to: LKSWYCNLLLSNCTMKKGKAYLG*KAGMPQ Trigger: CTGTGGCATGCCCGCCTTCCATCCTAAGTATGCTTT...ACCCTTCTTCATAGTACAGTTGCTAAGGAGGAGATTGCAGTACCAGGATTTCAG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022063.14 |
||
| 3UTR-3UTR CCA 90 bp | AAGTCTTTGCTGACCTCTTTGTCACAGAAGGCAACTTTGACATGGTGGTGCAGGTCTCTGGGAATGTGTTaGTCAGACCAGCAAGAGTTA | + |
|
Preference number: 2 (lower is better) Translates to: KSLLTSLSQKATLTWWCRSLGMC*SDQQEL Trigger: TAACTCTTGCTGGTCTGACCAACACATTCCCAGAGA...CCTGCACCACCATGTCAAAGTTGCCTTCTGTGACAAAGAGGTCAGCAAAGACTT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022063.14 |
||
| 3UTR-3UTR TCA 90 bp | GATTACCTTCCATATAGATCCTACCCACCTAGCAGTGCTTGGGGCTCCACCATGAGAACCTGGGTATCTTaGGAAATTACCATTTACAAG | + |
|
Preference number: 2 (lower is better) Translates to: DYLPYRSYPPSSAWGSTMRTWVS*EITIYK Trigger: CTTGTAAATGGTAATTTCTCAAGATACCCAGGTTCT...CATGGTGGAGCCCCAAGCACTGCTAGGTGGGTAGGATCTATATGGAAGGTAATC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022063.14 |
||
| 3UTR-3UTR CCA 90 bp | GATTACCTTCCATATAGATCCTACCCACCTAGCAGTGCTTGGGGCTCCACCATGTGTGGCTTCCTTCAATaGTCTAATGAATTAGGAAAC | + |
|
Preference number: 2 (lower is better) Translates to: DYLPYRSYPPSSAWGSTMCGFLQ*SNELGN Trigger: GTTTCCTAATTCATTAGACCATTGAAGGAAGCCACA...CATGGTGGAGCCCCAAGCACTGCTAGGTGGGTAGGATCTATATGGAAGGTAATC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022063.14 |
||
| 3UTR CAA 90 bp | CTAACCGGGAGGACATCCAGGTCTCCACCCCACTTTTTGGAAGTTTaGATCCAGACATTCATGAAACCAGCAATGAACTTGGTACTTTTT | + |
|
Preference number: 2 (lower is better) Translates to: LTGRTSRSPPHFLEV*IQTFMKPAMNLVLF Trigger: AAAAAGTACCAAGTTCATTGCTGGTTTCATGAATGTCTGGATCAAAACTTCCAAAAAGTGGGGTGGAGACCTGGATGTCCTCCCGGTTAG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000022063.14 ENSMUST00000160021.8 ENSMUST00000162672.8 |
||
| 3UTR-3UTR CCA 90 bp | TTCCTGATACCAACGAGCAGGACCCTAGTTTTAGTTCTCAGCATCAGAGAGGGATCCAGTGAGCTTTCCTaGGAATTTGTTGTGTTTCTA | + |
|
Preference number: 2 (lower is better) Translates to: FLIPTSRTLVLVLSIREGSSELS*EFVVFL Trigger: TAGAAACACAACAAATTCCCAGGAAAGCTCACTGGA...TCCCTCTCTGATGCTGAGAACTAAAACTAGGGTCCTGCTCGTTGGTATCAGGAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022063.14 |
||
| 3UTR-3UTR TCA 90 bp | GATTGCCATGGTAACAGATGTGCATGTCTCTGTTCCCTATGGGTGACATCACTGACAAAATACTACCTATaGCCTAGACAGATTGCTTTC | + |
|
Preference number: 2 (lower is better) Translates to: DCHGNRCACLCSLWVTSLTKYYL*PRQIAF Trigger: GAAAGCAATCTGTCTAGGTCATAGGTAGTATTTTGT...CAGTGATGTCACCCATAGGGAACAGAGACATGCACATCTGTTACCATGGCAATC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022063.14 |
||
| 3UTR-3UTR GCA 90 bp | GATTGCCATGGTAACAGATGTGCATGTCTCTGTTCCCTATGGGTGACATCACTGCTAGATTCTTCTACATaGCTGTTCTCTGCTGATTTT | + |
|
Preference number: 2 (lower is better) Translates to: DCHGNRCACLCSLWVTSLLDSST*LFSADF Trigger: AAAATCAGCAGAGAACAGGCATGTAGAAGAATCTAG...CAGTGATGTCACCCATAGGGAACAGAGACATGCACATCTGTTACCATGGCAATC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022063.14 |
||
| 3UTR-3UTR CCA 90 bp | TTCCTGATACCAACGAGCAGGACCCTAGTTTTAGTTCTCAGCATCAGAGAGGGACTTGAAAGGTGGTGTTaGTCCATTTTAGGTTCAATT | + |
|
Preference number: 2 (lower is better) Translates to: FLIPTSRTLVLVLSIREGLERWC*SILGSI Trigger: AATTGAACCTAAAATGGACCAACACCACCTTTCAAG...TCCCTCTCTGATGCTGAGAACTAAAACTAGGGTCCTGCTCGTTGGTATCAGGAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000022063.14 ENSMUST00000160021.8 |
||
| 3UTR-3UTR CCA 90 bp | ATAGCTATGAACGTAGCGCATTACAAAGTTGGAAACTTACTGAAGACACTGAGAACATGGGCAAACCAGTaGAGTAACAGAAAACTAGAG | + |
|
Preference number: 2 (lower is better) Translates to: IAMNVAHYKVGNLLKTLRTWANQ*SNRKLE Trigger: CTCTAGTTTTCTGTTACTCCACTGGTTTGCCCATGT...TCTCAGTGTCTTCAGTAAGTTTCCAACTTTGTAATGCGCTACGTTCATAGCTAT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022063.14 |
||
| 3UTR GCA 72 bp | CTGAAGCCATTAGGCCCAGCACCTCTGCAGGTCTGTTaGCCTTCACTCCGGGCAGACAGCCTGAGCCCTGGG | + |
|
Preference number: 3 (lower is better) Translates to: LKPLGPAPLQVC*PSLRADSLSPG Trigger: CCCAGGGCTCAGGCTGTCTGCCCGGAGTGAAGGGCAACAGACCTGCAGAGGTGCTGGGCCTAATGGCTTCAG 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022063.14 |
||
| 3UTR CCA 72 bp | GTGCAGCAATGTCCTTGTGGGAGGGCACTAGGAAGGTaGGGCCGTACCAAGGTGCTGGCCAGGACCTGCTGC | + |
|
Preference number: 3 (lower is better) Translates to: VQQCPCGRALGR*GRTKVLARTCC Trigger: GCAGCAGGTCCTGGCCAGCACCTTGGTACGGCCCCACCTTCCTAGTGCCCTCCCACAAGGACATTGCTGCAC 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022063.14 |
||
| 3UTR TCA 72 bp | TGCAGGTCTGTTGCCCTTCACTCCGGGCAGACAGCCTaGGCCCTGGGCAGCTCCTACAAGTTCTTGGCCTGG | + |
|
Preference number: 3 (lower is better) Translates to: CRSVALHSGQTA*ALGSSYKFLAW Trigger: CCAGGCCAAGAACTTGTAGGAGCTGCCCAGGGCTCAGGCTGTCTGCCCGGAGTGAAGGGCAACAGACCTGCA 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022063.14 |
||
| 3UTR TCA 72 bp | ACTGGCCACTGGAGGAGTTCCGGCTGGCTGTGCTACTaGGGCCAAACACTGACCACCCTGAAGACCTGCGTG | + |
|
Preference number: 3 (lower is better) Translates to: TGHWRSSGWLCY*GQTLTTLKTCV Trigger: CACGCAGGTCTTCAGGGTGGTCAGTGTTTGGCCTCAGTAGCACAGCCAGCCGGAACTCCTCCAGTGGCCAGT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022063.14 |
||
| 3UTR GCA 72 bp | CACCCTGAAGACCTGCGTGATCGTGCCTGCAAGGCCTaGCTGGAGGCCTGTATGCAGGGCATAGCTGACCAT | + |
|
Preference number: 3 (lower is better) Translates to: HPEDLRDRACKA*LEACMQGIADH Trigger: ATGGTCAGCTATGCCCTGCATACAGGCCTCCAGGCAGGCCTTGCAGGCACGATCACGCAGGTCTTCAGGGTG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022063.14 |
||
| 3UTR CCA 72 bp | GAGCAGGCAGATGTAACCCGTGCTCTGCTGAGTCACTaGCCACTGGAGGAGTTCCGGCTGGCTGTGCTACTG | + |
|
Preference number: 3 (lower is better) Translates to: EQADVTRALLSH*PLEEFRLAVLL Trigger: CAGTAGCACAGCCAGCCGGAACTCCTCCAGTGGCCAGTGACTCAGCAGAGCACGGGTTACATCTGCCTGCTC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022063.14 |
||
| 3UTR CCA 72 bp | GATCCTACCCACCTAGCAGTGCTTGGGGCTCCACCATaGCAACGCATTCCCATCTCTGCCGATGGCAGGGTC | + |
|
Preference number: 3 (lower is better) Translates to: DPTHLAVLGAPP*QRIPISADGRV Trigger: GACCCTGCCATCGGCAGAGATGGGAATGCGTTGCCATGGTGGAGCCCCAAGCACTGCTAGGTGGGTAGGATC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022063.14 |
||
| 3UTR GCA 72 bp | AACACTGACCACCCTGAAGACCTGCGTGATCGTGCCTaGAAGGCCTGCCTGGAGGCCTGTATGCAGGGCATA | + |
|
Preference number: 3 (lower is better) Translates to: NTDHPEDLRDRA*KACLEACMQGI Trigger: TATGCCCTGCATACAGGCCTCCAGGCAGGCCTTGCAGGCACGATCACGCAGGTCTTCAGGGTGGTCAGTGTT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022063.14 |
||
| 3UTR GCA 72 bp | TCAGGCAGTGCTCTCCGGCGCCTTTTTGCTGCACTCTaGGAACTCCCTAGGCTTCGCCATATTGAGTTCCCA | + |
|
Preference number: 3 (lower is better) Translates to: SGSALRRLFAAL*ELPRLRHIEFP Trigger: TGGGAACTCAATATGGCGAAGCCTAGGGAGTTCGCAGAGTGCAGCAAAAAGGCGCCGGAGAGCACTGCCTGA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000022063.14 ENSMUST00000160021.8 |
||
| 3UTR CCA 72 bp | TCCAGACAGACCACACCAGGCCAATGCAGTTCCATGTaGCAGAGGTTTATTGGGGTGGGTTGGGGTGGACAG | + |
|
Preference number: 3 (lower is better) Translates to: SRQTTPGQCSSM*QRFIGVGWGGQ Trigger: CTGTCCACCCCAACCCACCCCAATAAACCTCTGCCACATGGAACTGCATTGGCCTGGTGTGGTCTGTCTGGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000022063.14 |
||
| 3UTR CCA 72 bp | AAAGTTGGAGGTAGTACACAATGTCCGGCTGCATGCTaGCCATGTGCAGCAGCTGCTGACCCAGGTGGGCTT | + |
|
Preference number: 3 (lower is better) Translates to: KVGGSTQCPAAC*PCAAAADPGGL Trigger: AAGCCCACCTGGGTCAGCAGCTGCTGCACATGGCCAGCATGCAGCCGGACATTGTGTACTACCTCCAACTTT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022063.14 |
||
| 3UTR GCA 72 bp | GCAGTTCAAGTTTCTTGGAAACCCGCTCTCAGGCAGTaGTCTCCGGCGCCTTTTTGCTGCACTCTGCGAACT | + |
|
Preference number: 3 (lower is better) Translates to: AVQVSWKPALRQ*SPAPFCCTLRT Trigger: AGTTCGCAGAGTGCAGCAAAAAGGCGCCGGAGAGCACTGCCTGAGAGCGGGTTTCCAAGAAACTTGAACTGC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000022063.14 ENSMUST00000160021.8 |
||
| 3UTR GCA 72 bp | TGGCAGCTCTCATCCAGACAGACCACACCAGGCCAATaGAGTTCCATGTGGCAGAGGTTTATTGGGGTGGGT | + |
|
Preference number: 3 (lower is better) Translates to: WQLSSRQTTPGQ*SSMWQRFIGVG Trigger: ACCCACCCCAATAAACCTCTGCCACATGGAACTGCATTGGCCTGGTGTGGTCTGTCTGGATGAGAGCTGCCA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022063.14 |
||
| 3UTR CCA 72 bp | CCGGCGTGGTGGTTGTATGCCTTTAATCCCAACACTTaGGAGGCAGAGGCAGGTGGATTTCTGAGTTCGAGG | + |
|
Preference number: 3 (lower is better) Translates to: PAWWLYAFNPNT*EAEAGGFLSSR Trigger: CCTCGAACTCAGAAATCCACCTGCCTCTGCCTCCCAAGTGTTGGGATTAAAGGCATACAACCACCACGCCGG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022063.14 |
||
| 3UTR GCA 72 bp | AGGCTTCGCCATATTGAGTTCCCAGTACCAAAGGACTaGTACCCCGAGGGTGCCATCTACCCTCAGGATGAA | + |
|
Preference number: 3 (lower is better) Translates to: RLRHIEFPVPKD*YPEGAIYPQDE Trigger: TTCATCCTGAGGGTAGATGGCACCCTCGGGGTAGCAGTCCTTTGGTACTGGGAACTCAATATGGCGAAGCCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000022063.14 ENSMUST00000160021.8 ENSMUST00000162672.8 |
||
| 3UTR CCA 72 bp | TACCTTCCATATAGATCCTACCCACCTAGCAGTGCTTaGGGCTCCACCATGGCAACGCATTCCCATCTCTGC | + |
|
Preference number: 3 (lower is better) Translates to: YLPYRSYPPSSA*GSTMATHSHLC Trigger: GCAGAGATGGGAATGCGTTGCCATGGTGGAGCCCCAAGCACTGCTAGGTGGGTAGGATCTATATGGAAGGTA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022063.14 |
||
| 3UTR GCA 72 bp | CCTCCTCTCACAGGTAAACCATTCCAGATCCTCCTGTaGTGTCTCTACCCCCAAGGTCTGTCTACTTCCACT | + |
|
Preference number: 3 (lower is better) Translates to: PPLTGKPFQILL*CLYPQGLSTST Trigger: AGTGGAAGTAGACAGACCTTGGGGGTAGAGACAGCACAGGAGGATCTGGAATGGTTTACCTGTGAGAGGAGG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000022063.14 |
||
| 3UTR GCA 72 bp | GAATTACCGCATGCAAGCTGTCCTCTGACCTCCACATaGATACTGTGGCACACACATGCCTGTGCTTGGGTA | + |
|
Preference number: 3 (lower is better) Translates to: ELPHASCPLTST*ILWHTHACAWV Trigger: TACCCAAGCACAGGCATGTGTGTGCCACAGTATGCATGTGGAGGTCAGAGGACAGCTTGCATGCGGTAATTC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022063.14 |
||
| 3UTR CCA 72 bp | CTGGGATTCCACAGTGTAACCCCTGGTGGCTCCATCTaGCTCCCTCTAGATTCTTCTACATGCCTGTTCTCT | + |
|
Preference number: 3 (lower is better) Translates to: LGFHSVTPGGSI*LPLDSSTCLFS Trigger: AGAGAACAGGCATGTAGAAGAATCTAGAGGGAGCCAGATGGAGCCACCAGGGGTTACACTGTGGAATCCCAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022063.14 |
||
| 3UTR CCA 72 bp | ACAATGCTCCCTGGGATTCCACAGTGTAACCCCTGGTaGCTCCATCTGGCTCCCTCTAGATTCTTCTACATG | + |
|
Preference number: 3 (lower is better) Translates to: TMLPGIPQCNPW*LHLAPSRFFYM Trigger: CATGTAGAAGAATCTAGAGGGAGCCAGATGGAGCCACCAGGGGTTACACTGTGGAATCCCAGGGAGCATTGT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022063.14 |
||
| 3UTR-3UTR CAA 90 bp | CCACCACATACTGTCTTGTTTAATAAGGGCAGTGAAGGGTGTGTTCCCAGAAAGCTCTCCGGCGCCTTTTaGCTGCACTCTGCGAACTCC | + |
|
Preference number: 3 (lower is better) Translates to: PPHTVLFNKGSEGCVPRKLSGAF*LHSANS Trigger: GGAGTTCGCAGAGTGCAGCAAAAAGGCGCCGGAGAG...CTTTCTGGGAACACACCCTTCACTGCCCTTATTAAACAAGACAGTATGTGGTGG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000022063.14 ENSMUST00000160021.8 |
||
| 3UTR TCA 72 bp | GGACTGCTACCCCGAGGGTGCCATCTACCCTCAGGATaGACTGTCAGTGTCCAAATTCGACCAACAGAAATA | + |
|
Preference number: 3 (lower is better) Translates to: GLLPRGCHLPSG*TVSVQIRPTEI Trigger: TATTTCTGTTGGTCGAATTTGGACACTGACAGTTCATCCTGAGGGTAGATGGCACCCTCGGGGTAGCAGTCC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000022063.14 ENSMUST00000160021.8 ENSMUST00000162672.8 |
||
| 3UTR TCA 72 bp | GGCCACATTCAGGCTGCTGGACTTCCTTCTCAGCCCTaGAAACCATTACTGGTCCTATTGTCATCAGAGTGG | + |
|
Preference number: 3 (lower is better) Translates to: GHIQAAGLPSQP*KPLLVLLSSEW Trigger: CCACTCTGATGACAATAGGACCAGTAATGGTTTTCAGGGCTGAGAAGGAAGTCCAGCAGCCTGAATGTGGCC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000022063.14 ENSMUST00000160021.8 |
||
| 3UTR TCA 72 bp | TATTGCCTGGGAGCTCAGCCAGATGAACCAGCTCACTaGGCTAAGTGTGGCTTTCTCTACACTCACTGGGAA | + |
|
Preference number: 3 (lower is better) Translates to: YCLGAQPDEPAH*AKCGFLYTHWE Trigger: TTCCCAGTGAGTGTAGAGAAAGCCACACTTAGCTCAGTGAGCTGGTTCATCTGGCTGAGCTCCCAGGCAATA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022063.14 |
||
| 3UTR-3UTR CAA 90 bp | TTCCTGATACCAACGAGCAGGACCCTAGTTTTAGTTCTCAGCATCAGAGAGGGATCTATCGGTGGCTGTTaGGGCTTTGTTTCCACCTGC | + |
|
Preference number: 3 (lower is better) Translates to: FLIPTSRTLVLVLSIREGSIGGC*GFVSTC Trigger: GCAGGTGGAAACAAAGCCCAAACAGCCACCGATAGA...TCCCTCTCTGATGCTGAGAACTAAAACTAGGGTCCTGCTCGTTGGTATCAGGAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022063.14 |
||
| 3UTR TCA 72 bp | ATGGTAACAGATGTGCATGTCTCTGTTCCCTATGGGTaGCATCACTGGGTTCAGAGGCAATCTGGCAAGCTG | + |
|
Preference number: 3 (lower is better) Translates to: MVTDVHVSVPYG*HHWVQRQSGKL Trigger: CAGCTTGCCAGATTGCCTCTGAACCCAGTGATGTCACCCATAGGGAACAGAGACATGCACATCTGTTACCAT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000022063.14 ENSMUST00000160021.8 |
||
| 3UTR GCA 72 bp | GCTGCCCAAACACTGAGAGTGCTCACCCTCGAGGAGTaGAACATCACAGACAGCCATGTTAACATGATGATT | + |
|
Preference number: 3 (lower is better) Translates to: AAQTLRVLTLEE*NITDSHVNMMI Trigger: AATCATCATGTTAACATGGCTGTCTGTGATGTTGCACTCCTCGAGGGTGAGCACTCTCAGTGTTTGGGCAGC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000022063.14 ENSMUST00000160021.8 |
||
| 3UTR GCA 72 bp | AGTGGTCCCACTTCGGACAACAAAATCAAGCAGCTCTaGTTTCACCAGCAGGGTGCCATAAGACAGACAGAT | + |
|
Preference number: 3 (lower is better) Translates to: SGPTSDNKIKQL*FHQQGAIRQTD Trigger: ATCTGTCTGTCTTATGGCACCCTGCTGGTGAAAGCAGAGCTGCTTGATTTTGTTGTCCGAAGTGGGACCACT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022063.14 |
||
| 3UTR CCA 72 bp | CACGAATCACTGCTCCTCCTCAGAATGGCTGAGGCCTaGCCCTTTGCAACTCCTTTGAGAAACAAATCATCA | + |
|
Preference number: 3 (lower is better) Translates to: HESLLLLRMAEA*PFATPLRNKSS Trigger: TGATGATTTGTTTCTCAAAGGAGTTGCAAAGGGCCAGGCCTCAGCCATTCTGAGGAGGAGCAGTGATTCGTG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022063.14 |
||
| 3UTR CCA 72 bp | GTGAATTCAGGGTTATGGAGGCCACATTCAGGCTGCTaGACTTCCTTCTCAGCCCTGAAAACCATTACTGGT | + |
|
Preference number: 3 (lower is better) Translates to: VNSGLWRPHSGC*TSFSALKTITG Trigger: ACCAGTAATGGTTTTCAGGGCTGAGAAGGAAGTCCAGCAGCCTGAATGTGGCCTCCATAACCCTGAATTCAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000022063.14 ENSMUST00000160021.8 |
||
| 3UTR CCA 72 bp | TGCCATGGTAACAGATGTGCATGTCTCTGTTCCCTATaGGTGACATCACTGGGTTCAGAGGCAATCTGGCAA | + |
|
Preference number: 3 (lower is better) Translates to: CHGNRCACLCSL*VTSLGSEAIWQ Trigger: TTGCCAGATTGCCTCTGAACCCAGTGATGTCACCCATAGGGAACAGAGACATGCACATCTGTTACCATGGCA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000022063.14 ENSMUST00000160021.8 |
||
| 3UTR-3UTR CAA 90 bp | GCGAACTCCCTAGGCTTCGCCATATTGAGTTCCCAGTACCAAAGGACTGCTACCCCCTTTGCAACTCCTTaGAGAAACAAATCATCACGT | + |
|
Preference number: 3 (lower is better) Translates to: ANSLGFAILSSQYQRTATPFATP*RNKSSR Trigger: ACGTGATGATTTGTTTCTCAAAGGAGTTGCAAAGGG...GGTAGCAGTCCTTTGGTACTGGGAACTCAATATGGCGAAGCCTAGGGAGTTCGC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000022063.14 |
||
| 3UTR-3UTR CAA 90 bp | AGCCATCTCTCCAGGCCCAGTCCGTATTCTTTTTCGGTGAAATTGTTTCTCCCAATCAGGCTCAACCATTaGTCACCAGCAGCAACACTG | + |
|
Preference number: 3 (lower is better) Translates to: SHLSRPSPYSFSVKLFLPIRLNH*SPAATL Trigger: CAGTGTTGCTGCTGGTGACAAATGGTTGAGCCTGAT...TGGGAGAAACAATTTCACCGAAAAAGAATACGGACTGGGCCTGGAGAGATGGCT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000022063.14 |
||
| 3UTR TCA 72 bp | AACTCGGCCATGGGGCTTGCCCATAATCCCAGTGCTTaGGGTCAGCTACAAAGAGAGGCTTATTTCAACAAA | + |
|
Preference number: 3 (lower is better) Translates to: NSAMGLAHNPSA*GQLQREAYFNK Trigger: TTTGTTGAAATAAGCCTCTCTTTGTAGCTGACCTCAAGCACTGGGATTATGGGCAAGCCCCATGGCCGAGTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022063.14 |
||
| 3UTR TCA 72 bp | CCAAACTGGTACCTAAGGACCAAAATAGCAGTCAGATaGCCACAAGGGCCAGTTTACCACTTTCTGGGCTTG | + |
|
Preference number: 3 (lower is better) Translates to: PNWYLRTKIAVR*PQGPVYHFLGL Trigger: CAAGCCCAGAAAGTGGTAAACTGGCCCTTGTGGTCATCTGACTGCTATTTTGGTCCTTAGGTACCAGTTTGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022063.14 |
||
| 3UTR GCA 72 bp | CAGGTAAGGGTGGGAAATGGACTCTGGGAATGTGATTaGCATGGTAACAGATGTGCATGTCTCTGTTCCCTA | + |
|
Preference number: 3 (lower is better) Translates to: QVRVGNGLWECD*HGNRCACLCSL Trigger: TAGGGAACAGAGACATGCACATCTGTTACCATGGCAATCACATTCCCAGAGTCCATTTCCCACCCTTACCTG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000022063.14 ENSMUST00000160021.8 |
||
| 3UTR CCA 72 bp | CTGCTGGACTTCCTTCTCAGCCCTGAAAACCATTACTaGTCCTATTGTCATCAGAGTGGCAGCACTCTCTTT | + |
|
Preference number: 3 (lower is better) Translates to: LLDFLLSPENHY*SYCHQSGSTLF Trigger: AAAGAGAGTGCTGCCACTCTGATGACAATAGGACCAGTAATGGTTTTCAGGGCTGAGAAGGAAGTCCAGCAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000022063.14 ENSMUST00000160021.8 |
||
| 3UTR CCA 72 bp | CACTGCCACTCTCTTCAGACACACCAGAAGTGGGCATaGGATTCCATTACAGATGGTCATGAACCACTATGT | + |
|
Preference number: 3 (lower is better) Translates to: HCHSLQTHQKWA*DSITDGHEPLC Trigger: ACATAGTGGTTCATGACCATCTGTAATGGAATCCCATGCCCACTTCTGGTGTGTCTGAAGAGAGTGGCAGTG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022063.14 |
||
| 3UTR-3UTR CAA 90 bp | AAACTGGTACCTAAGGACCAAAATAGCAGTCAGATGACCACAAGGGCCAGTTTAGTTTATTGGGGTGGGTaGGGGTGGACAGAGACAAAG | + |
|
Preference number: 3 (lower is better) Translates to: KLVPKDQNSSQMTTRASLVYWGG*GWTETK Trigger: CTTTGTCTCTGTCCACCCCAACCCACCCCAATAAAC...TAAACTGGCCCTTGTGGTCATCTGACTGCTATTTTGGTCCTTAGGTACCAGTTT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000022063.14 |
||
| 3UTR-3UTR CAA 90 bp | AGCCATCTCTCCAGGCCCAGTCCGTATTCTTTTTCGGTGAAATTGTTTCTCCCATCTGTCTACTTCCACTaGACCCCGAACAGCAATAAA | + |
|
Preference number: 3 (lower is better) Translates to: SHLSRPSPYSFSVKLFLPSVYFH*TPNSNK Trigger: TTTATTGCTGTTCGGGGTCAAGTGGAAGTAGACAGA...TGGGAGAAACAATTTCACCGAAAAAGAATACGGACTGGGCCTGGAGAGATGGCT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000022063.14 |
||
| 3UTR-3UTR CAA 90 bp | TACCCCGAGGGTGCCATCTACCCTCAGGATGAACTGTCAGTGTCCAAATTCGACGAACTTGGTACTTTTTaGCTGCAAGCTTTCAAAACT | + |
|
Preference number: 3 (lower is better) Translates to: YPEGAIYPQDELSVSKFDELGTF*LQAFKT Trigger: AGTTTTGAAAGCTTGCAGCAAAAAAGTACCAAGTTC...GTCGAATTTGGACACTGACAGTTCATCCTGAGGGTAGATGGCACCCTCGGGGTA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000022063.14 ENSMUST00000160021.8 ENSMUST00000162672.8 |
||
| 3UTR-3UTR CAA 90 bp | TGCTACCCCGAGGGTGCCATCTACCCTCAGGATGAACTGTCAGTGTCCAAATTCGAACTTGGTACTTTTTaGCTGCAAGCTTTCAAAACT | + |
|
Preference number: 3 (lower is better) Translates to: CYPEGAIYPQDELSVSKFELGTF*LQAFKT Trigger: AGTTTTGAAAGCTTGCAGCAAAAAAGTACCAAGTTC...GAATTTGGACACTGACAGTTCATCCTGAGGGTAGATGGCACCCTCGGGGTAGCA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000022063.14 ENSMUST00000160021.8 ENSMUST00000162672.8 |
||
| 3UTR TCA 72 bp | TGTCAGTGTCCAAATTCGACCAACAGAAATACGACGTaGTTGCAGAGGATCTTCGAGCAGTACTGCTTCGAG | + |
|
Preference number: 3 (lower is better) Translates to: CQCPNSTNRNTT*LQRIFEQYCFE Trigger: CTCGAAGCAGTACTGCTCGAAGATCCTCTGCAATCACGTCGTATTTCTGTTGGTCGAATTTGGACACTGACA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000022063.14 ENSMUST00000160021.8 ENSMUST00000162672.8 |
||
| 3UTR GCA 72 bp | ATAGTGAATTCAGGGTTATGGAGGCCACATTCAGGCTaGTGGACTTCCTTCTCAGCCCTGAAAACCATTACT | + |
|
Preference number: 3 (lower is better) Translates to: IVNSGLWRPHSG*WTSFSALKTIT Trigger: AGTAATGGTTTTCAGGGCTGAGAAGGAAGTCCAGCAGCCTGAATGTGGCCTCCATAACCCTGAATTCACTAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000022063.14 ENSMUST00000160021.8 |
||
| 3UTR GCA 72 bp | TGGCTTTCTCTACACTCACTGGGAAGATCCAAACATTaGTTAGGTAAGTCTCAGAGAATTGGGTACAGGGCC | + |
|
Preference number: 3 (lower is better) Translates to: WLSLHSLGRSKH*LGKSQRIGYRA Trigger: GGCCCTGTACCCAATTCTCTGAGACTTACCTAAGCAATGTTTGGATCTTCCCAGTGAGTGTAGAGAAAGCCA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022063.14 |
||
| 3UTR GCA 72 bp | GATTCCATTACAGATGGTCATGAACCACTATGTGGTTaGTGGGAATTGAACGCTGGAACTCTGGAAGAGCAC | + |
|
Preference number: 3 (lower is better) Translates to: DSITDGHEPLCG*WELNAGTLEEH Trigger: GTGCTCTTCCAGAGTTCCAGCGTTCAATTCCCAGCAACCACATAGTGGTTCATGACCATCTGTAATGGAATC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022063.14 |
||
| 3UTR CCA 72 bp | AAAGTCACACAAAAAGTAATACCATGCCCGGCGTGGTaGTTGTATGCCTTTAATCCCAACACTTGGGAGGCA | + |
|
Preference number: 3 (lower is better) Translates to: KVTQKVIPCPAW*LYAFNPNTWEA Trigger: TGCCTCCCAAGTGTTGGGATTAAAGGCATACAACCACCACGCCGGGCATGGTATTACTTTTTGTGTGACTTT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000022063.14 |
||
| 3UTR CCA 72 bp | GAAGTTATTTCAGACACACCTCCCCACAGAGGATACTaGCTGAATAGTGAATTCAGGGTTATGGAGGCCACA | + |
|
Preference number: 3 (lower is better) Translates to: EVISDTPPHRGY*LNSEFRVMEAT Trigger: TGTGGCCTCCATAACCCTGAATTCACTATTCAGCCAGTATCCTCTGTGGGGAGGTGTGTCTGAAATAACTTC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000022063.14 ENSMUST00000160021.8 |
||
| 3UTR TCA 72 bp | TCGTTACGTGCTCTAAGAGGAAGCCAGATACATAAATaGGACATGAGGTGCTCCTGTGTGTTAGCACAGCAA | + |
|
Preference number: 3 (lower is better) Translates to: SLRALRGSQIHK*DMRCSCVLAQQ Trigger: TTGCTGTGCTAACACACAGGAGCACCTCATGTCTCATTTATGTATCTGGCTTCCTCTTAGAGCACGTAACGA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022063.14 |
||
| 3UTR GCA 72 bp | GGTGGCTCCATCTGGCTCCCTCTAGATTCTTCTACATaGCTGTTCTCTGCTGATTTTATCTTTCTTGCTAAC | + |
|
Preference number: 3 (lower is better) Translates to: GGSIWLPLDSST*LFSADFIFLAN Trigger: GTTAGCAAGAAAGATAAAATCAGCAGAGAACAGGCATGTAGAAGAATCTAGAGGGAGCCAGATGGAGCCACC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022063.14 |
||
| 3UTR CCA 72 bp | GGCAGGCTGCAGTCAGTGATCTCTAAGATAGAAAAGTaGTTAGATTATTCACCTCCACCAAAACTCCAGCTC | + |
|
Preference number: 3 (lower is better) Translates to: GRLQSVISKIEK*LDYSPPPKLQL Trigger: GAGCTGGAGTTTTGGTGGAGGTGAATAATCTAACCACTTTTCTATCTTAGAGATCACTGACTGCAGCCTGCC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000022063.14 ENSMUST00000160021.8 |
||
| 3UTR CCA 72 bp | TATTTAGGCTCACAGGTAAGGGTGGGAAATGGACTCTaGGAATGTGATTGCCATGGTAACAGATGTGCATGT | + |
|
Preference number: 3 (lower is better) Translates to: YLGSQVRVGNGL*ECDCHGNRCAC Trigger: ACATGCACATCTGTTACCATGGCAATCACATTCCCAGAGTCCATTTCCCACCCTTACCTGTGAGCCTAAATA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000022063.14 ENSMUST00000160021.8 |
||
| 3UTR TCA 72 bp | TCAGAATGGCTGAGGCCTGGCCCTTTGCAACTCCTTTaGGAAACAAATCATCACGTAAGAAAGACTCGTTTA | + |
|
Preference number: 3 (lower is better) Translates to: SEWLRPGPLQLL*ETNHHVRKTRL Trigger: TAAACGAGTCTTTCTTACGTGATGATTTGTTTCTCAAAGGAGTTGCAAAGGGCCAGGCCTCAGCCATTCTGA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022063.14 |
||
| 3UTR TCA 72 bp | TCCACCTGCAGCAGATTTTTATCGTCTTTTGGTGACTaGGGACATCTAGTCACTGAAATATGCCCAGTGTTT | + |
|
Preference number: 3 (lower is better) Translates to: STCSRFLSSFGD*GHLVTEICPVF Trigger: AAACACTGGGCATATTTCAGTGACTAGATGTCCTCAGTCACCAAAAGACGATAAAAATCTGCTGCAGGTGGA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000022063.14 |
||
| 3UTR TCA 72 bp | TTAGATTATTCACCTCCACCAAAACTCCAGCTCACCTaGGACCCTCATAACATTTGTGATGTTTTGCCTACC | + |
|
Preference number: 3 (lower is better) Translates to: LDYSPPPKLQLT*DPHNICDVLPT Trigger: GGTAGGCAAAACATCACAAATGTTATGAGGGTCTCAGGTGAGCTGGAGTTTTGGTGGAGGTGAATAATCTAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000022063.14 ENSMUST00000160021.8 |
||
| 3UTR-3UTR CAA 90 bp | ACTGGTCCTATTGTCATCAGAGTGGCAGCACTCTCTTTCAAGCTAATTCTATCCCAGAACCTGGGTATCTaGAGAAATTACCATTTACAA | + |
|
Preference number: 3 (lower is better) Translates to: TGPIVIRVAALSFKLILSQNLGI*RNYHLQ Trigger: TTGTAAATGGTAATTTCTCAAGATACCCAGGTTCTG...GGATAGAATTAGCTTGAAAGAGAGTGCTGCCACTCTGATGACAATAGGACCAGT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022063.14 |
||
| 3UTR CCA 72 bp | TCTATCAAAATCTTGATAGTCTCCAGTGAGCTTTCCTaGGAATTTGTTGTGTTTCTAGTTATACCCCTAAAC | + |
|
Preference number: 3 (lower is better) Translates to: SIKILIVSSELS*EFVVFLVIPLN Trigger: GTTTAGGGGTATAACTAGAAACACAACAAATTCCCAGGAAAGCTCACTGGAGACTATCAAGATTTTGATAGA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000022063.14 |
||
| 3UTR TCA 72 bp | TTAGAAACTATGGCAAGTCACAGAACCTGGGTATCTTaGGAAATTACCATTTACAAGTACTTAGCTCATAAA | + |
|
Preference number: 3 (lower is better) Translates to: LETMASHRTWVS*EITIYKYLAHK Trigger: TTTATGAGCTAAGTACTTGTAAATGGTAATTTCTCAAGATACCCAGGTTCTGTGACTTGCCATAGTTTCTAA 35% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022063.14 |
||
| 3UTR CAA 72 bp | CCTGAAGCCATTAGGCCCAGCACCTCTGCAGGTCTGTaGCCCTTCACTCCGGGCAGACAGCCTGAGCCCTGG | + |
|
Preference number: 4 (lower is better) Translates to: PEAIRPSTSAGL*PFTPGRQPEPW Trigger: CCAGGGCTCAGGCTGTCTGCCCGGAGTGAAGGGCAACAGACCTGCAGAGGTGCTGGGCCTAATGGCTTCAGG 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022063.14 |
||
| 3UTR CAA 72 bp | CACCGGCATCCAGGACGTACAGGTGCAGCAATGTCCTaGTGGGAGGGCACTAGGAAGGTGGGGCCGTACCAA | + |
|
Preference number: 4 (lower is better) Translates to: HRHPGRTGAAMS*WEGTRKVGPYQ Trigger: TTGGTACGGCCCCACCTTCCTAGTGCCCTCCCACAAGGACATTGCTGCACCTGTACGTCCTGGATGCCGGTG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022063.14 |
||
| 3UTR CAA 72 bp | GAAACCCGCTCTCAGGCAGTGCTCTCCGGCGCCTTTTaGCTGCACTCTGCGAACTCCCTAGGCTTCGCCATA | + |
|
Preference number: 4 (lower is better) Translates to: ETRSQAVLSGAF*LHSANSLGFAI Trigger: TATGGCGAAGCCTAGGGAGTTCGCAGAGTGCAGCAAAAAGGCGCCGGAGAGCACTGCCTGAGAGCGGGTTTC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000022063.14 ENSMUST00000160021.8 |
||
| CDS-3UTR GCA 90 bp | CCAGTACCAAAGGACTGCTACCCCGAGGGTGCCATCTACCCTCAGGATGAACTGGCCAACTTACGCCCCTaGGAGATGAGGGCTTCTCGA | + |
|
Preference number: 4 (lower is better) Translates to: PVPKDCYPEGAIYPQDELANLRP*EMRASR Trigger: TCGAGAAGCCCTCATCTCGCAGGGGCGTAAGTTGGC...CAGTTCATCCTGAGGGTAGATGGCACCCTCGGGGTAGCAGTCCTTTGGTACTGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000022063.14 ENSMUST00000160021.8 |
||
| 3UTR CAA 72 bp | GTTCTTGGCCTGGCTGGGCCAGGCAACCTTAGAAAGTaGGAGGTAGTACACAATGTCCGGCTGCATGCTGGC | + |
|
Preference number: 4 (lower is better) Translates to: VLGLAGPGNLRK*EVVHNVRLHAG Trigger: GCCAGCATGCAGCCGGACATTGTGTACTACCTCCAACTTTCTAAGGTTGCCTGGCCCAGCCAGGCCAAGAAC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022063.14 |
||
| CDS-3UTR GCA 90 bp | AACTCCCTAGGCTTCGCCATATTGAGTTCCCAGTACCAAAGGACTGCTACCCCGGCCAACTTACGCCCCTaGGAGATGAGGGCTTCTCGA | + |
|
Preference number: 4 (lower is better) Translates to: NSLGFAILSSQYQRTATPANLRP*EMRASR Trigger: TCGAGAAGCCCTCATCTCGCAGGGGCGTAAGTTGGC...CGGGGTAGCAGTCCTTTGGTACTGGGAACTCAATATGGCGAAGCCTAGGGAGTT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000022063.14 ENSMUST00000160021.8 |
||
| 3UTR CAA 72 bp | TTGCTGCACTCTGCGAACTCCCTAGGCTTCGCCATATaGAGTTCCCAGTACCAAAGGACTGCTACCCCGAGG | + |
|
Preference number: 4 (lower is better) Translates to: LLHSANSLGFAI*SSQYQRTATPR Trigger: CCTCGGGGTAGCAGTCCTTTGGTACTGGGAACTCAATATGGCGAAGCCTAGGGAGTTCGCAGAGTGCAGCAA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000022063.14 ENSMUST00000160021.8 ENSMUST00000162672.8 |
||
| CDS-3UTR GCA 90 bp | TGCTACCCCGAGGGTGCCATCTACCCTCAGGATGAACTGTCAGTGTCCAAATTCACCTCTTTCAGCACATaGTGGGCTCTCCTCTGCCAG | + |
|
Preference number: 4 (lower is better) Translates to: CYPEGAIYPQDELSVSKFTSFST*WALLCQ Trigger: CTGGCAGAGGAGAGCCCAGCATGTGCTGAAAGAGGT...GAATTTGGACACTGACAGTTCATCCTGAGGGTAGATGGCACCCTCGGGGTAGCA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022063.14 |
||
| CDS-3UTR CCA 90 bp | CCTAGGCTTCGCCATATTGAGTTCCCAGTACCAAAGGACTGCTACCCCGAGGGTTCTTTCAGCACATGCTaGGCTCTCCTCTGCCAGTCA | + |
|
Preference number: 4 (lower is better) Translates to: PRLRHIEFPVPKDCYPEGSFSTC*ALLCQS Trigger: TGACTGGCAGAGGAGAGCCCAGCATGTGCTGAAAGA...ACCCTCGGGGTAGCAGTCCTTTGGTACTGGGAACTCAATATGGCGAAGCCTAGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000022063.14 ENSMUST00000160021.8 |
||
| CDS-3UTR GCA 90 bp | TCAGGCTCAACCATTTGTCACCAGCAGCAACACTGCCACAAGATTTCCTCAGAGGCCAACTTACGCCCCTaGGAGATGAGGGCTTCTCGA | + |
|
Preference number: 4 (lower is better) Translates to: SGSTICHQQQHCHKISSEANLRP*EMRASR Trigger: TCGAGAAGCCCTCATCTCGCAGGGGCGTAAGTTGGC...CTCTGAGGAAATCTTGTGGCAGTGTTGCTGCTGGTGACAAATGGTTGAGCCTGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000022063.14 ENSMUST00000159931.2 ENSMUST00000160021.8 |
||
| CDS-3UTR TCA 90 bp | CCAGTACCAAAGGACTGCTACCCCGAGGGTGCCATCTACCCTCAGGATGAACTGATGAGCTTCCCATTTTaGCGTTTGTTGGTGTTCCAG | + |
|
Preference number: 4 (lower is better) Translates to: PVPKDCYPEGAIYPQDELMSFPF*RLLVFQ Trigger: CTGGAACACCAACAAACGTCAAAATGGGAAGCTCAT...CAGTTCATCCTGAGGGTAGATGGCACCCTCGGGGTAGCAGTCCTTTGGTACTGG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000022063.14 |
||
| CDS-3UTR GCA 90 bp | TTAGTGGTCCCACTTCGGACAACAAAATCAAGCAGCTCTGCTTTCACCAGCAGGTGCTGGGCTCTCCTCTaGCAGTCATCCTCTTCTTGC | + |
|
Preference number: 4 (lower is better) Translates to: LVVPLRTTKSSSSAFTSRCWALL*QSSSSC Trigger: GCAAGAAGAGGATGACTGGCAGAGGAGAGCCCAGCA...CCTGCTGGTGAAAGCAGAGCTGCTTGATTTTGTTGTCCGAAGTGGGACCACTAA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022063.14 |
||
| CDS-3UTR GCA 90 bp | CAGGCTCAACCATTTGTCACCAGCAGCAACACTGCCACAAGATTTCCTCAGAGATGCTGGGCTCTCCTCTaGCAGTCATCCTCTTCTTGC | + |
|
Preference number: 4 (lower is better) Translates to: QAQPFVTSSNTATRFPQRCWALL*QSSSSC Trigger: GCAAGAAGAGGATGACTGGCAGAGGAGAGCCCAGCA...TCTCTGAGGAAATCTTGTGGCAGTGTTGCTGCTGGTGACAAATGGTTGAGCCTG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000022063.14 ENSMUST00000159931.2 ENSMUST00000160021.8 |
||
| CDS-3UTR GCA 90 bp | GATCAGGCTCAACCATTTGTCACCAGCAGCAACACTGCCACAAGATTTCCTCAGTCCTCTTTCAGCACATaGTGGGCTCTCCTCTGCCAG | + |
|
Preference number: 4 (lower is better) Translates to: DQAQPFVTSSNTATRFPQSSFST*WALLCQ Trigger: CTGGCAGAGGAGAGCCCAGCATGTGCTGAAAGAGGA...CTGAGGAAATCTTGTGGCAGTGTTGCTGCTGGTGACAAATGGTTGAGCCTGATC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000159931.2 |
||
| CDS-3UTR TCA 90 bp | CAGAGGATCTTCGAGCAGTACTGCTTCGAGCTAACCGGGAGGACATCCAGGTCTTTTTCTTGCTTTATCTaGGCCCGTTCCTGTTCGAGA | + |
|
Preference number: 4 (lower is better) Translates to: QRIFEQYCFELTGRTSRSFSCFI*ARSCSR Trigger: TCTCGAACAGGAACGGGCTCAGATAAAGCAAGAAAA...AGACCTGGATGTCCTCCCGGTTAGCTCGAAGCAGTACTGCTCGAAGATCCTCTG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000022063.14 ENSMUST00000160021.8 |
||
| CDS-3UTR CCA 90 bp | ACACTGCCCACTTGGAGGTGCTGGACCTCAGTGGACACAACCTGGTACACCTGTTCACAGCATGGTATTTaGCTTCAAGATCCTGTTGGA | + |
|
Preference number: 4 (lower is better) Translates to: TLPTWRCWTSVDTTWYTCSQHGI*LQDPVG Trigger: TCCAACAGGATCTTGAAGCCAAATACCATGCTGTGA...ACAGGTGTACCAGGTTGTGTCCACTGAGGTCCAGCACCTCCAAGTGGGCAGTGT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000022063.14 ENSMUST00000160021.8 |
||
| CDS-3UTR CCA 90 bp | CCAGTACCAAAGGACTGCTACCCCGAGGGTGCCATCTACCCTCAGGATGAACTGCATTTTGACGTTTGTTaGTGTTCCAGACATCTCCAC | + |
|
Preference number: 4 (lower is better) Translates to: PVPKDCYPEGAIYPQDELHFDVC*CSRHLH Trigger: GTGGAGATGTCTGGAACACCAACAAACGTCAAAATG...CAGTTCATCCTGAGGGTAGATGGCACCCTCGGGGTAGCAGTCCTTTGGTACTGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000022063.14 |
||
| 3UTR CAA 72 bp | AGGTCAGTCCTGGACCAGATGATCAGGCTCAACCATTaGTCACCAGCAGCAACACTGCCACAAGATTTCCTC | + |
|
Preference number: 4 (lower is better) Translates to: RSVLDQMIRLNH*SPAATLPQDFL Trigger: GAGGAAATCTTGTGGCAGTGTTGCTGCTGGTGACAAATGGTTGAGCCTGATCATCTGGTCCAGGACTGACCT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000022063.14 ENSMUST00000160021.8 |
||
| 3UTR CAA 72 bp | CTACCTCACAGCCCCTTGAAGACCCCACTAAGAGTGTaGGACCTAGCCAACTGTGCCCTTAATCATGAAGAC | + |
|
Preference number: 4 (lower is better) Translates to: LPHSPLKTPLRV*DLANCALNHED Trigger: GTCTTCATGATTAAGGGCACAGTTGGCTAGGTCCAACACTCTTAGTGGGGTCTTCAAGGGGCTGTGAGGTAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000022063.14 ENSMUST00000160021.8 |
||
| CDS-3UTR TCA 90 bp | GCGAACTCCCTAGGCTTCGCCATATTGAGTTCCCAGTACCAAAGGACTGCTACCTTTTCTTGCTTTATCTaGGCCCGTTCCTGTTCGAGA | + |
|
Preference number: 4 (lower is better) Translates to: ANSLGFAILSSQYQRTATFSCFI*ARSCSR Trigger: TCTCGAACAGGAACGGGCTCAGATAAAGCAAGAAAA...GGTAGCAGTCCTTTGGTACTGGGAACTCAATATGGCGAAGCCTAGGGAGTTCGC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000022063.14 ENSMUST00000160021.8 |
||
| CDS-3UTR CCA 90 bp | AACCATTTGTCACCAGCAGCAACACTGCCACAAGATTTCCTCAGAGAAAACTGCTCTTTCAGCACATGCTaGGCTCTCCTCTGCCAGTCA | + |
|
Preference number: 4 (lower is better) Translates to: NHLSPAATLPQDFLRENCSFSTC*ALLCQS Trigger: TGACTGGCAGAGGAGAGCCCAGCATGTGCTGAAAGA...GCAGTTTTCTCTGAGGAAATCTTGTGGCAGTGTTGCTGCTGGTGACAAATGGTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000022063.14 ENSMUST00000159931.2 ENSMUST00000160021.8 |
||
| 3UTR CAA 72 bp | CAAGTGCAGTTCAGGATTTTGCTTCCCTCAGATCTTTaGACTGGGATAGGCCCCATCTGGGCAGAATATCCA | + |
|
Preference number: 4 (lower is better) Translates to: QVQFRILLPSDL*TGIGPIWAEYP Trigger: TGGATATTCTGCCCAGATGGGGCCTATCCCAGTCAAAAGATCTGAGGGAAGCAAAATCCTGAACTGCACTTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000022063.14 |
||
| 3UTR CAA 72 bp | ACCACTGTTTCATCCATCCAAGTGCAGTTCAGGATTTaGCTTCCCTCAGATCTTTTGACTGGGATAGGCCCC | + |
|
Preference number: 4 (lower is better) Translates to: TTVSSIQVQFRI*LPSDLLTGIGP Trigger: GGGGCCTATCCCAGTCAAAAGATCTGAGGGAAGCAAAATCCTGAACTGCACTTGGATGGATGAAACAGTGGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022063.14 |
||
| CDS-3UTR GCA 90 bp | TCAGTGTCCAAATTCGACCAACAGAAATACGACGTGATTGCAGAGGATCTTCGACACCAGCAGCAACACTaGCACAAGATTTCCTCAGAG | + |
|
Preference number: 4 (lower is better) Translates to: SVSKFDQQKYDVIAEDLRHQQQH*HKISSE Trigger: CTCTGAGGAAATCTTGTGGCAGTGTTGCTGCTGGTG...TCGAAGATCCTCTGCAATCACGTCGTATTTCTGTTGGTCGAATTTGGACACTGA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000162672.8 |
||
| CDS-3UTR CCA 90 bp | CAGGCTCAACCATTTGTCACCAGCAGCAACACTGCCACAAGATTTCCTCAGAGATCACAGCATGGTATTTaGCTTCAAGATCCTGTTGGA | + |
|
Preference number: 4 (lower is better) Translates to: QAQPFVTSSNTATRFPQRSQHGI*LQDPVG Trigger: TCCAACAGGATCTTGAAGCCAAATACCATGCTGTGA...TCTCTGAGGAAATCTTGTGGCAGTGTTGCTGCTGGTGACAAATGGTTGAGCCTG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000022063.14 ENSMUST00000159931.2 ENSMUST00000160021.8 |
||
| CDS-3UTR TCA 90 bp | AACCATTTGTCACCAGCAGCAACACTGCCACAAGATTTCCTCAGAGAAAACTGCTTTTCTTGCTTTATCTaGGCCCGTTCCTGTTCGAGA | + |
|
Preference number: 4 (lower is better) Translates to: NHLSPAATLPQDFLRENCFSCFI*ARSCSR Trigger: TCTCGAACAGGAACGGGCTCAGATAAAGCAAGAAAA...GCAGTTTTCTCTGAGGAAATCTTGTGGCAGTGTTGCTGCTGGTGACAAATGGTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000022063.14 ENSMUST00000159931.2 ENSMUST00000160021.8 |
||
| CDS-3UTR CCA 90 bp | CCATTTGTCACCAGCAGCAACACTGCCACAAGATTTCCTCAGAGAAAACTGCAGTCACAGCATGGTATTTaGCTTCAAGATCCTGTTGGA | + |
|
Preference number: 4 (lower is better) Translates to: PFVTSSNTATRFPQRKLQSQHGI*LQDPVG Trigger: TCCAACAGGATCTTGAAGCCAAATACCATGCTGTGA...CTGCAGTTTTCTCTGAGGAAATCTTGTGGCAGTGTTGCTGCTGGTGACAAATGG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000022063.14 ENSMUST00000159931.2 ENSMUST00000160021.8 |
||
| 3UTR CAA 72 bp | CTCAGAATGGCTGAGGCCTGGCCCTTTGCAACTCCTTaGAGAAACAAATCATCACGTAAGAAAGACTCGTTT | + |
|
Preference number: 4 (lower is better) Translates to: LRMAEAWPFATP*RNKSSRKKDSF Trigger: AAACGAGTCTTTCTTACGTGATGATTTGTTTCTCAAAGGAGTTGCAAAGGGCCAGGCCTCAGCCATTCTGAG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022063.14 |
||
| CDS-3UTR GCA 90 bp | TCCATTTTAGGTTCAATTACTGACTGCTCAACAGGCCCAGCAGCTGTAGACTTCCAGACATCTCCACAATaGTTATCATGCTTAAATATG | + |
|
Preference number: 4 (lower is better) Translates to: SILGSITDCSTGPAAVDFQTSPQ*LSCLNM Trigger: CATATTTAAGCATGATAAGCATTGTGGAGATGTCTG...GAAGTCTACAGCTGCTGGGCCTGTTGAGCAGTCAGTAATTGAACCTAAAATGGA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022063.14 |
||
| 3UTR CAA 72 bp | CTTCTACATGCCTGTTCTCTGCTGATTTTATCTTTCTaGCTAACACAAATCTTAGTCCTGAGGGCAACCATA | + |
|
Preference number: 4 (lower is better) Translates to: LLHACSLLILSF*LTQILVLRATI Trigger: TATGGTTGCCCTCAGGACTAAGATTTGTGTTAGCAAGAAAGATAAAATCAGCAGAGAACAGGCATGTAGAAG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022063.14 |
||
| 3UTR CAA 72 bp | AAAGGTCACATGAATAGATCTCACTCTATCAAAATCTaGATAGTCTCCAGTGAGCTTTCCTGGGAATTTGTT | + |
|
Preference number: 4 (lower is better) Translates to: KGHMNRSHSIKI*IVSSELSWEFV Trigger: AACAAATTCCCAGGAAAGCTCACTGGAGACTATCAAGATTTTGATAGAGTGAGATCTATTCATGTGACCTTT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022063.14 |
||
| CDS-3UTR GCA 90 bp | TTTTTGGAAGTTTTGATCCAGACATTCATGAAACCAGCAATGAACTTGGTACTTCCACAATGCTTATCATaGTTAAATATGTCAGACAAG | + |
|
Preference number: 4 (lower is better) Translates to: FLEVLIQTFMKPAMNLVLPQCLS*LNMSDK Trigger: CTTGTCTGACATATTTAAGCATGATAAGCATTGTGG...AAGTACCAAGTTCATTGCTGGTTTCATGAATGTCTGGATCAAAACTTCCAAAAA 34% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000022063.14 |
||
| CDS GCA 90 bp | AGCCAGCTGCCATTTCTAGGTCAGCAGCCACTGGATCAACAGATGTaGGCACCAGTAAGCTCTTCTCCAGCTCTAGTCGTGCACTACGGG | + |
|
Preference number: 5 (lower is better) Translates to: SQLPFLGQQPLDQQM*APVSSSPALVVHYG Trigger: CCCGTAGTGCACGACTAGAGCTGGAGAAGAGCTTACTGGTGCGCACATCTGTTGATCCAGTGGCTGCTGACCTAGAAATGGCAGCTGGCT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000022063.14 ENSMUST00000162376.2 |
||
| CDS CCA 90 bp | TTTTGGCGTTCCTCGAGAGCTTCTCCCACCTCTTTCAGCACATGCTaGGCTCTCCTCTGCCAGTCATCCTCTTCTTGCAGGCAGCTCAAA | + |
|
Preference number: 5 (lower is better) Translates to: FWRSSRASPTSFSTC*ALLCQSSSSCRQLK Trigger: TTTGAGCTGCCTGCAAGAAGAGGATGACTGGCAGAGGAGAGCCCAGCATGTGCTGAAAGAGGTGGGAGAAGCTCTCGAGGAACGCCAAAA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000022063.14 ENSMUST00000162376.2 |
||
| CDS-3UTR CAA 90 bp | TCTTGGAAACCCGCTCTCAGGCAGTGCTCTCCGGCGCCTTTTTGCTGCACTCTGATCACAGCATGGTATTaGGCTTCAAGATCCTGTTGG | + |
|
Preference number: 5 (lower is better) Translates to: SWKPALRQCSPAPFCCTLITAWY*ASRSCW Trigger: CCAACAGGATCTTGAAGCCAAATACCATGCTGTGAT...CAGAGTGCAGCAAAAAGGCGCCGGAGAGCACTGCCTGAGAGCGGGTTTCCAAGA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000022063.14 ENSMUST00000160021.8 |
||
| CDS TCA 90 bp | GCACCAGTAAGCTCTTCTCCAGCTCTAGTCGTGCACTACGGGGGATaGTCAGGCTACAATAGATATTTTGGCGTTCCTCGAGAGCTTCTC | + |
|
Preference number: 5 (lower is better) Translates to: APVSSSPALVVHYGG*SGYNRYFGVPRELL Trigger: GAGAAGCTCTCGAGGAACGCCAAAATATCTATTGTAGCCTGATCATCCCCCGTAGTGCACGACTAGAGCTGGAGAAGAGCTTACTGGTGC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000022063.14 ENSMUST00000162376.2 |
||
| CDS CCA 90 bp | GCTGAGCCACAGCGCGCCGGTGTTCTGAGATCACAGCATGGTATTTaGCTTCAAGATCCTGTTGGAAAGCAGCTGTTCTCTGATGATATG | + |
|
Preference number: 5 (lower is better) Translates to: AEPQRAGVLRSQHGI*LQDPVGKQLFSDDM Trigger: CATATCATCAGAGAACAGCTGCTTTCCAACAGGATCTTGAAGCCAAATACCATGCTGTGATCTCAGAACACCGGCGCGCTGTGGCTCAGC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000022063.14 ENSMUST00000159931.2 ENSMUST00000160021.8 ENSMUST00000162376.2 |
||
| CDS-3UTR CAA 90 bp | AACCATTTGTCACCAGCAGCAACACTGCCACAAGATTTCCTCAGAGAAAACTGCCTGAGGCCTGGCCCTTaGCAACTCCTCTTTCAGCAC | + |
|
Preference number: 5 (lower is better) Translates to: NHLSPAATLPQDFLRENCLRPGP*QLLFQH Trigger: GTGCTGAAAGAGGAGTTGCAAAGGGCCAGGCCTCAG...GCAGTTTTCTCTGAGGAAATCTTGTGGCAGTGTTGCTGCTGGTGACAAATGGTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000159931.2 |
||
| CDS TCA 90 bp | TTTTTCCAGTTCCAAAGACAGCTGAGCCACAGCGCGCCGGTGTTCTaGGATCACAGCATGGTATTTGGCTTCAAGATCCTGTTGGAAAGC | + |
|
Preference number: 5 (lower is better) Translates to: FFQFQRQLSHSAPVF*DHSMVFGFKILLES Trigger: GCTTTCCAACAGGATCTTGAAGCCAAATACCATGCTGTGATCTCAGAACACCGGCGCGCTGTGGCTCAGCTGTCTTTGGAACTGGAAAAA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000022063.14 ENSMUST00000159931.2 ENSMUST00000160021.8 ENSMUST00000162376.2 |
||
| CDS-3UTR CAA 90 bp | GCGAACTCCCTAGGCTTCGCCATATTGAGTTCCCAGTACCAAAGGACTGCTACCATCACAGCATGGTATTaGGCTTCAAGATCCTGTTGG | + |
|
Preference number: 5 (lower is better) Translates to: ANSLGFAILSSQYQRTATITAWY*ASRSCW Trigger: CCAACAGGATCTTGAAGCCAAATACCATGCTGTGAT...GGTAGCAGTCCTTTGGTACTGGGAACTCAATATGGCGAAGCCTAGGGAGTTCGC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000022063.14 ENSMUST00000160021.8 |
||
| CDS-3UTR CAA 90 bp | TTAGTGGTCCCACTTCGGACAACAAAATCAAGCAGCTCTGCTTTCACCAGCAGGCATGAGCTTCCCATTTaGACGTTTGTTGGTGTTCCA | + |
|
Preference number: 5 (lower is better) Translates to: LVVPLRTTKSSSSAFTSRHELPI*TFVGVP Trigger: TGGAACACCAACAAACGTCAAAATGGGAAGCTCATG...CCTGCTGGTGAAAGCAGAGCTGCTTGATTTTGTTGTCCGAAGTGGGACCACTAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022063.14 |
||
| CDS-3UTR CAA 90 bp | AACCATTTGTCACCAGCAGCAACACTGCCACAAGATTTCCTCAGAGAAAACTGCATCACAGCATGGTATTaGGCTTCAAGATCCTGTTGG | + |
|
Preference number: 5 (lower is better) Translates to: NHLSPAATLPQDFLRENCITAWY*ASRSCW Trigger: CCAACAGGATCTTGAAGCCAAATACCATGCTGTGAT...GCAGTTTTCTCTGAGGAAATCTTGTGGCAGTGTTGCTGCTGGTGACAAATGGTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000022063.14 ENSMUST00000159931.2 ENSMUST00000160021.8 |
||
| CDS-3UTR CAA 90 bp | AGAGAAAACTGCAGGCGTACTCGTTACGTGCTTGAAGACACTGAGATGATTTTTCCAGTCATCCTCTTCTaGCAGGCAGCTCAAATAGAC | + |
|
Preference number: 5 (lower is better) Translates to: RENCRRTRYVLEDTEMIFPVILF*QAAQID Trigger: GTCTATTTGAGCTGCCTGCAAGAAGAGGATGACTGG...AAAAATCATCTCAGTGTCTTCAAGCACGTAACGAGTACGCCTGCAGTTTTCTCT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000159931.2 |
||
| CDS-3UTR CAA 90 bp | TCCAATGTCTGTAAATCAAACACCCAACTCAGATCCACTCCACAAAATACTACCCCAGTCATCCTCTTCTaGCAGGCAGCTCAAATAGAC | + |
|
Preference number: 5 (lower is better) Translates to: SNVCKSNTQLRSTPQNTTPVILF*QAAQID Trigger: GTCTATTTGAGCTGCCTGCAAGAAGAGGATGACTGG...GGTAGTATTTTGTGGAGTGGATCTGAGTTGGGTGTTTGATTTACAGACATTGGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000022063.14 |
||
| CDS TCA 90 bp | AGTAGTTCCCAGTATTTGAGATACATCCACATGAGCTTCCCATTTTaGCGTTTGTTGGTGTTCCAGACATCTCCACAATGCTTATCATGC | + |
|
Preference number: 5 (lower is better) Translates to: SSSQYLRYIHMSFPF*RLLVFQTSPQCLSC Trigger: GCATGATAAGCATTGTGGAGATGTCTGGAACACCAACAAACGTCAAAATGGGAAGCTCATGTGGATGTATCTCAAATACTGGGAACTACT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022063.14 |
||
| CDS GCA 72 bp | CGTTCCTCGAGAGCTTCTCCCACCTCTTTCAGCACATaGTGGGCTCTCCTCTGCCAGTCATCCTCTTCTTGC | + |
|
Preference number: 6 (lower is better) Translates to: RSSRASPTSFST*WALLCQSSSSC Trigger: GCAAGAAGAGGATGACTGGCAGAGGAGAGCCCAGCATGTGCTGAAAGAGGTGGGAGAAGCTCTCGAGGAACG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000022063.14 ENSMUST00000162376.2 |
||
| CDS CCA 72 bp | TCCTCGAGAGCTTCTCCCACCTCTTTCAGCACATGCTaGGCTCTCCTCTGCCAGTCATCCTCTTCTTGCAGG | + |
|
Preference number: 6 (lower is better) Translates to: SSRASPTSFSTC*ALLCQSSSSCR Trigger: CCTGCAAGAAGAGGATGACTGGCAGAGGAGAGCCCAGCATGTGCTGAAAGAGGTGGGAGAAGCTCTCGAGGA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000022063.14 ENSMUST00000162376.2 |
||
| CDS CCA 72 bp | CAGCGCGCCGGTGTTCTGAGATCACAGCATGGTATTTaGCTTCAAGATCCTGTTGGAAAGCAGCTGTTCTCT | + |
|
Preference number: 6 (lower is better) Translates to: QRAGVLRSQHGI*LQDPVGKQLFS Trigger: AGAGAACAGCTGCTTTCCAACAGGATCTTGAAGCCAAATACCATGCTGTGATCTCAGAACACCGGCGCGCTG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000022063.14 ENSMUST00000159931.2 ENSMUST00000160021.8 ENSMUST00000162376.2 |
||
| CDS CAA 72 bp | ACAGCGCGCCGGTGTTCTGAGATCACAGCATGGTATTaGGCTTCAAGATCCTGTTGGAAAGCAGCTGTTCTC | + |
|
Preference number: 6 (lower is better) Translates to: TARRCSEITAWY*ASRSCWKAAVL Trigger: GAGAACAGCTGCTTTCCAACAGGATCTTGAAGCCAAATACCATGCTGTGATCTCAGAACACCGGCGCGCTGT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000022063.14 ENSMUST00000159931.2 ENSMUST00000160021.8 ENSMUST00000162376.2 |
||
| CDS TCA 72 bp | CAGTATTTGAGATACATCCACATGAGCTTCCCATTTTaGCGTTTGTTGGTGTTCCAGACATCTCCACAATGC | + |
|
Preference number: 6 (lower is better) Translates to: QYLRYIHMSFPF*RLLVFQTSPQC Trigger: GCATTGTGGAGATGTCTGGAACACCAACAAACGTCAAAATGGGAAGCTCATGTGGATGTATCTCAAATACTG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022063.14 |
||
| CDS CAA 72 bp | CCAGTATTTGAGATACATCCACATGAGCTTCCCATTTaGACGTTTGTTGGTGTTCCAGACATCTCCACAATG | + |
|
Preference number: 6 (lower is better) Translates to: PVFEIHPHELPI*TFVGVPDISTM Trigger: CATTGTGGAGATGTCTGGAACACCAACAAACGTCAAAATGGGAAGCTCATGTGGATGTATCTCAAATACTGG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022063.14 |
||