Pregenerated sensors for CCDC125 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000048924Ensembl transcript IDs: ENSMUST00000057325.15, ENSMUST00000170347.4
Found 119 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | GACCAGGCTGGTCTCGAACTTAGAAATCCGCCTGCCTCTGCCTCCTaGGTGTGTGTGTGTGTGCTACCACGCCCGGCTTTAGCAACAGTC | + |
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Preference number: 1 (lower is better) Translates to: DQAGLELRNPPASAS*VCVCVLPRPALATV Trigger: GACTGTTGCTAAAGCCGGGCGTGGTAGCACACACACACACACTCAGGAGGCAGAGGCAGGCGGATTTCTAAGTTCGAGACCAGCCTGGTC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000057325.15 |
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| 3UTR CCA 90 bp | TGCCTTATGAAGCATTTGTGCTGGAACTCACTCTGTAGACCAGACTaGCCTCAAAGTCAGAGATCGCCTGCCTCTGCTTTCCTGAGTGCC | + |
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Preference number: 1 (lower is better) Translates to: CLMKHLCWNSLCRPD*PQSQRSPASAFLSA Trigger: GGCACTCAGGAAAGCAGAGGCAGGCGATCTCTGACTTTGAGGCCAGTCTGGTCTACAGAGTGAGTTCCAGCACAAATGCTTCATAAGGCA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000057325.15 |
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| 3UTR TCA 90 bp | AGACCCAAGGCCCGTTTTGTATTCTCCCACGACAGGATTGCCTTATaGAGCATTTGTGCTGGAACTCACTCTGTAGACCAGACTGGCCTC | + |
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Preference number: 1 (lower is better) Translates to: RPKARFVFSHDRIAL*SICAGTHSVDQTGL Trigger: GAGGCCAGTCTGGTCTACAGAGTGAGTTCCAGCACAAATGCTTCATAAGGCAATCCTGTCGTGGGAGAATACAAAACGGGCCTTGGGTCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000057325.15 |
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| 3UTR GCA 90 bp | CCGTTTTGTATTCTCCCACGACAGGATTGCCTTATGAAGCATTTGTaGTGGAACTCACTCTGTAGACCAGACTGGCCTCAAAGTCAGAGA | + |
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Preference number: 1 (lower is better) Translates to: PFCILPRQDCLMKHL*WNSLCRPDWPQSQR Trigger: TCTCTGACTTTGAGGCCAGTCTGGTCTACAGAGTGAGTTCCAGCACAAATGCTTCATAAGGCAATCCTGTCGTGGGAGAATACAAAACGG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000057325.15 |
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| 3UTR-3UTR GCA 90 bp | TTAGAAATCCGCCTGCCTCTGCCTCCTGAGTGTGTGTGTGTGTGCTACCACGCCAAGTCAGAGATCGCCTaGCTCTGCTTTCCTGAGTGC | + |
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Preference number: 2 (lower is better) Translates to: LEIRLPLPPECVCVCYHAKSEIA*LCFPEC Trigger: GCACTCAGGAAAGCAGAGGCAGGCGATCTCTGACTT...GGCGTGGTAGCACACACACACACACTCAGGAGGCAGAGGCAGGCGGATTTCTAA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000057325.15 |
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| 3UTR-3UTR CCA 90 bp | CTCAGCCTCCCACGTGCTGGGATTTCCAGGCCTGAGCTTCCAGACAGTCTTTGCCTCTGTAGACCAGACTaGCCTCAAAGTCAGAGATCG | + |
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Preference number: 2 (lower is better) Translates to: LSLPRAGISRPELPDSLCLCRPD*PQSQRS Trigger: CGATCTCTGACTTTGAGGCCAGTCTGGTCTACAGAG...GCAAAGACTGTCTGGAAGCTCAGGCCTGGAAATCCCAGCACGTGGGAGGCTGAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000057325.15 |
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| 3UTR-3UTR CCA 90 bp | AAATCCGCCTGCCTCTGCCTCCTGAGTGTGTGTGTGTGTGCTACCACGCCCGGCATGAAGCATTTGTGCTaGAACTCACTCTGTAGACCA | + |
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Preference number: 2 (lower is better) Translates to: KSACLCLLSVCVCATTPGMKHLC*NSLCRP Trigger: TGGTCTACAGAGTGAGTTCCAGCACAAATGCTTCAT...GCCGGGCGTGGTAGCACACACACACACACTCAGGAGGCAGAGGCAGGCGGATTT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000057325.15 |
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| 3UTR CAA 90 bp | GGCCCGTTTTGTATTCTCCCACGACAGGATTGCCTTATGAAGCATTaGTGCTGGAACTCACTCTGTAGACCAGACTGGCCTCAAAGTCAG | + |
|
Preference number: 2 (lower is better) Translates to: GPFCILPRQDCLMKH*CWNSLCRPDWPQSQ Trigger: CTGACTTTGAGGCCAGTCTGGTCTACAGAGTGAGTTCCAGCACAAATGCTTCATAAGGCAATCCTGTCGTGGGAGAATACAAAACGGGCC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000057325.15 |
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| 3UTR-3UTR GCA 90 bp | CTGGTCTCGAACTTAGAAATCCGCCTGCCTCTGCCTCCTGAGTGTGTGTGTGTGCTTATGAAGCATTTGTaGTGGAACTCACTCTGTAGA | + |
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Preference number: 2 (lower is better) Translates to: LVSNLEIRLPLPPECVCVLMKHL*WNSLCR Trigger: TCTACAGAGTGAGTTCCAGCACAAATGCTTCATAAG...CACACACACACACTCAGGAGGCAGAGGCAGGCGGATTTCTAAGTTCGAGACCAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000057325.15 |
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| 3UTR-3UTR TCA 90 bp | CACCTTGAAAGCCTACAGCGTCTTCATATTGACATTTATATAGTTGTTCTTCTGCCTGCCTCTGCCTCCTaGGTGTGTGTGTGTGTGCTA | + |
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Preference number: 2 (lower is better) Translates to: HLESLQRLHIDIYIVVLLPASAS*VCVCVL Trigger: TAGCACACACACACACACTCAGGAGGCAGAGGCAGG...CAGAAGAACAACTATATAAATGTCAATATGAAGACGCTGTAGGCTTTCAAGGTG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000057325.15 |
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| 3UTR GCA 72 bp | GCTGGGATTTCCAGGCCTGAGCTTCCAGACAGTCTTTaGAGTGCTGAACATCAGACCCAAGGCCCGTTTTGT | + |
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Preference number: 3 (lower is better) Translates to: AGISRPELPDSL*SAEHQTQGPFC Trigger: ACAAAACGGGCCTTGGGTCTGATGTTCAGCACTGCAAAGACTGTCTGGAAGCTCAGGCCTGGAAATCCCAGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000057325.15 |
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| 3UTR CCA 72 bp | AAGCATTTGTGCTGGAACTCACTCTGTAGACCAGACTaGCCTCAAAGTCAGAGATCGCCTGCCTCTGCTTTC | + |
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Preference number: 3 (lower is better) Translates to: KHLCWNSLCRPD*PQSQRSPASAF Trigger: GAAAGCAGAGGCAGGCGATCTCTGACTTTGAGGCCAGTCTGGTCTACAGAGTGAGTTCCAGCACAAATGCTT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000057325.15 |
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| 3UTR CCA 72 bp | CTCCCACGACAGGATTGCCTTATGAAGCATTTGTGCTaGAACTCACTCTGTAGACCAGACTGGCCTCAAAGT | + |
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Preference number: 3 (lower is better) Translates to: LPRQDCLMKHLC*NSLCRPDWPQS Trigger: ACTTTGAGGCCAGTCTGGTCTACAGAGTGAGTTCCAGCACAAATGCTTCATAAGGCAATCCTGTCGTGGGAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000057325.15 |
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| 3UTR TCA 72 bp | GCCCGTTTTGTATTCTCCCACGACAGGATTGCCTTATaGAGCATTTGTGCTGGAACTCACTCTGTAGACCAG | + |
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Preference number: 3 (lower is better) Translates to: ARFVFSHDRIAL*SICAGTHSVDQ Trigger: CTGGTCTACAGAGTGAGTTCCAGCACAAATGCTTCATAAGGCAATCCTGTCGTGGGAGAATACAAAACGGGC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000057325.15 |
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| 3UTR GCA 72 bp | ATTCTCCCACGACAGGATTGCCTTATGAAGCATTTGTaGTGGAACTCACTCTGTAGACCAGACTGGCCTCAA | + |
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Preference number: 3 (lower is better) Translates to: ILPRQDCLMKHL*WNSLCRPDWPQ Trigger: TTGAGGCCAGTCTGGTCTACAGAGTGAGTTCCAGCACAAATGCTTCATAAGGCAATCCTGTCGTGGGAGAAT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000057325.15 |
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| CDS-3UTR TCA 90 bp | AAATCCGCCTGCCTCTGCCTCCTGAGTGTGTGTGTGTGTGCTACCACGCCCGGCCTCCCTCCAGGACCATaGCACAGGCAGGCTCCAAGG | + |
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Preference number: 4 (lower is better) Translates to: KSACLCLLSVCVCATTPGLPPGP*HRQAPR Trigger: CCTTGGAGCCTGCCTGTGTCATGGTCCTGGAGGGAG...GCCGGGCGTGGTAGCACACACACACACACTCAGGAGGCAGAGGCAGGCGGATTT 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000057325.15 |
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| CDS-3UTR TCA 90 bp | CTCAGCCTCCCACGTGCTGGGATTTCCAGGCCTGAGCTTCCAGACAGTCTTTGCAAGCCACTCTCCTCCTaGCCCATCTTCTGCTCCTTG | + |
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Preference number: 4 (lower is better) Translates to: LSLPRAGISRPELPDSLCKPLSS*PIFCSL Trigger: CAAGGAGCAGAAGATGGGTCAGGAGGAGAGTGGCTT...GCAAAGACTGTCTGGAAGCTCAGGCCTGGAAATCCCAGCACGTGGGAGGCTGAG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000057325.15 |
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| CDS-3UTR TCA 90 bp | TTAGAAATCCGCCTGCCTCTGCCTCCTGAGTGTGTGTGTGTGTGCTACCACGCCCGTGCCAGGCCGTTTTaGATGGGAAGGTCTGGCTCA | + |
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Preference number: 4 (lower is better) Translates to: LEIRLPLPPECVCVCYHARARPF*MGRSGS Trigger: TGAGCCAGACCTTCCCATTCAAAACGGCCTGGCACG...GGCGTGGTAGCACACACACACACACTCAGGAGGCAGAGGCAGGCGGATTTCTAA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000057325.15 |
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| CDS-3UTR CCA 90 bp | GCCTCCCACGTGCTGGGATTTCCAGGCCTGAGCTTCCAGACAGTCTTTGCAGTGCTGTGCTGCTCAGTCTaGATGCTCGGTATCCCTCAG | + |
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Preference number: 4 (lower is better) Translates to: ASHVLGFPGLSFQTVFAVLCCSV*MLGIPQ Trigger: CTGAGGGATACCGAGCATCCAGACTGAGCAGCACAG...CACTGCAAAGACTGTCTGGAAGCTCAGGCCTGGAAATCCCAGCACGTGGGAGGC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000057325.15 |
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| CDS-3UTR CCA 90 bp | GCCTCTGCTTTCCTGAGTGCCAGGGTTAAAGGCGTGCGCCACCATGGACTGACCTGGATGCTGCCATTTTaGCACAAGAACAGGGGCTCC | + |
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Preference number: 4 (lower is better) Translates to: ASAFLSARVKGVRHHGLTWMLPF*HKNRGS Trigger: GGAGCCCCTGTTCTTGTGCCAAAATGGCAGCATCCA...GGTCAGTCCATGGTGGCGCACGCCTTTAACCCTGGCACTCAGGAAAGCAGAGGC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000057325.15 |
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| CDS-3UTR GCA 90 bp | AAATCCGCCTGCCTCTGCCTCCTGAGTGTGTGTGTGTGTGCTACCACGCCCGGCTCCAGCCAGTCTCAGTaGCTGCTCATTTTTCCTCAT | + |
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Preference number: 4 (lower is better) Translates to: KSACLCLLSVCVCATTPGSSQSQ*LLIFPH Trigger: ATGAGGAAAAATGAGCAGGCACTGAGACTGGCTGGA...GCCGGGCGTGGTAGCACACACACACACACTCAGGAGGCAGAGGCAGGCGGATTT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000057325.15 |
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| CDS-3UTR TCA 90 bp | TTTGTCTTCCAGCGCCCGAGCGAGCATGTAACTAACCTTTCTCTGATGTGCAAGCTCCCTCCAGGACCATaGCACAGGCAGGCTCCAAGG | + |
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Preference number: 4 (lower is better) Translates to: FVFQRPSEHVTNLSLMCKLPPGP*HRQAPR Trigger: CCTTGGAGCCTGCCTGTGTCATGGTCCTGGAGGGAG...CTTGCACATCAGAGAAAGGTTAGTTACATGCTCGCTCGGGCGCTGGAAGACAAA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000170347.4 |
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| CDS-3UTR TCA 90 bp | TCGCCTGCCTCTGCTTTCCTGAGTGCCAGGGTTAAAGGCGTGCGCCACCATGGAAACTCATGTCTGAGCTaGAGAACCAGTTTCCGAGTG | + |
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Preference number: 4 (lower is better) Translates to: SPASAFLSARVKGVRHHGNSCLS*RTSFRV Trigger: CACTCGGAAACTGGTTCTTCAGCTCAGACATGAGTT...TCCATGGTGGCGCACGCCTTTAACCCTGGCACTCAGGAAAGCAGAGGCAGGCGA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000057325.15 |
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| CDS-3UTR CCA 90 bp | CTCAGCCTCCCACGTGCTGGGATTTCCAGGCCTGAGCTTCCAGACAGTCTTTGCTCTGTGTGTGGCTTGTaGCTTTGCCAAGCATTGCCA | + |
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Preference number: 4 (lower is better) Translates to: LSLPRAGISRPELPDSLCSVCGL*LCQALP Trigger: TGGCAATGCTTGGCAAAGCCACAAGCCACACACAGA...GCAAAGACTGTCTGGAAGCTCAGGCCTGGAAATCCCAGCACGTGGGAGGCTGAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000057325.15 |
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| CDS-3UTR CCA 90 bp | CTCAGCCTCCCACGTGCTGGGATTTCCAGGCCTGAGCTTCCAGACAGTCTTTGCAGCATTGTCTGTGTGTaGCTTGTGGCTTTGCCAAGC | + |
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Preference number: 4 (lower is better) Translates to: LSLPRAGISRPELPDSLCSIVCV*LVALPS Trigger: GCTTGGCAAAGCCACAAGCCACACACAGACAATGCT...GCAAAGACTGTCTGGAAGCTCAGGCCTGGAAATCCCAGCACGTGGGAGGCTGAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000057325.15 |
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| CDS-3UTR TCA 90 bp | TCGCCTGCCTCTGCTTTCCTGAGTGCCAGGGTTAAAGGCGTGCGCCACCATGGACTCATCCGACAATTCTaGGTTAGAATCTGTGCTGCT | + |
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Preference number: 4 (lower is better) Translates to: SPASAFLSARVKGVRHHGLIRQF*VRICAA Trigger: AGCAGCACAGATTCTAACTCAGAATTGTCGGATGAG...TCCATGGTGGCGCACGCCTTTAACCCTGGCACTCAGGAAAGCAGAGGCAGGCGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000057325.15 |
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| CDS-3UTR TCA 90 bp | GGCCGTGTCTTTGTCTTCCAGCGCCCGAGCGAGCATGTAACTAACCTTTCTCTGCCATCTTCTGCTCCTTaGTATCAAGCATGGCGAGGG | + |
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Preference number: 4 (lower is better) Translates to: GRVFVFQRPSEHVTNLSLPSSAP*YQAWRG Trigger: CCCTCGCCATGCTTGATATCAAGGAGCAGAAGATGG...CAGAGAAAGGTTAGTTACATGCTCGCTCGGGCGCTGGAAGACAAAGACACGGCC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000170347.4 |
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| CDS-3UTR GCA 90 bp | AAATCCGCCTGCCTCTGCCTCCTGAGTGTGTGTGTGTGTGCTACCACGCCCGGCTGCCAAGCATTGCCATaGTTTGGAGGATTTTCAATG | + |
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Preference number: 4 (lower is better) Translates to: KSACLCLLSVCVCATTPGCQALP*FGGFSM Trigger: CATTGAAAATCCTCCAAAGCATGGCAATGCTTGGCA...GCCGGGCGTGGTAGCACACACACACACACTCAGGAGGCAGAGGCAGGCGGATTT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000057325.15 |
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| CDS-3UTR GCA 90 bp | CTCAGCCTCCCACGTGCTGGGATTTCCAGGCCTGAGCTTCCAGACAGTCTTTGCTGTGGCTTGTGGCTTTaGCAAGCATTGCCATGCTTT | + |
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Preference number: 4 (lower is better) Translates to: LSLPRAGISRPELPDSLCCGLWL*QALPCF Trigger: AAAGCATGGCAATGCTTGGCAAAGCCACAAGCCACA...GCAAAGACTGTCTGGAAGCTCAGGCCTGGAAATCCCAGCACGTGGGAGGCTGAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000057325.15 |
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| CDS-3UTR GCA 90 bp | GCCTCCCACGTGCTGGGATTTCCAGGCCTGAGCTTCCAGACAGTCTTTGCAGTGCAGTTTCCGAGTGGATaGTGCCATTTTGGCACAAGA | + |
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Preference number: 4 (lower is better) Translates to: ASHVLGFPGLSFQTVFAVQFPSG*CHFGTR Trigger: TCTTGTGCCAAAATGGCAGCATCCACTCGGAAACTG...CACTGCAAAGACTGTCTGGAAGCTCAGGCCTGGAAATCCCAGCACGTGGGAGGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000057325.15 |
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| CDS-3UTR CCA 90 bp | TCGCCTGCCTCTGCTTTCCTGAGTGCCAGGGTTAAAGGCGTGCGCCACCATGGAGAAAGCCCTTCCTCCTaGAATACTGGAAACTGGTTT | + |
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Preference number: 4 (lower is better) Translates to: SPASAFLSARVKGVRHHGESPSS*NTGNWF Trigger: AAACCAGTTTCCAGTATTCCAGGAGGAAGGGCTTTC...TCCATGGTGGCGCACGCCTTTAACCCTGGCACTCAGGAAAGCAGAGGCAGGCGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000057325.15 |
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| CDS-3UTR TCA 90 bp | CTCAGCCTCCCACGTGCTGGGATTTCCAGGCCTGAGCTTCCAGACAGTCTTTGCGCCTCCAAGTACCGCTaGTTCAAAACAGCATTCTTA | + |
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Preference number: 4 (lower is better) Translates to: LSLPRAGISRPELPDSLCASKYR*FKTAFL Trigger: TAAGAATGCTGTTTTGAATCAGCGGTACTTGGAGGC...GCAAAGACTGTCTGGAAGCTCAGGCCTGGAAATCCCAGCACGTGGGAGGCTGAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000057325.15 |
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| CDS-3UTR TCA 90 bp | CTCAGCCTCCCACGTGCTGGGATTTCCAGGCCTGAGCTTCCAGACAGTCTTTGCTTTCCAACTCATGTCTaGGCTGAAGAACCAGTTTCC | + |
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Preference number: 4 (lower is better) Translates to: LSLPRAGISRPELPDSLCFPTHV*AEEPVS Trigger: GGAAACTGGTTCTTCAGCTCAGACATGAGTTGGAAA...GCAAAGACTGTCTGGAAGCTCAGGCCTGGAAATCCCAGCACGTGGGAGGCTGAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000057325.15 |
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| CDS-3UTR TCA 90 bp | ACCAGACTGGCCTCAAAGTCAGAGATCGCCTGCCTCTGCTTTCCTGAGTGCCAGAGTTCTTGGGCAGTCTaGAACTTTTGGAGGATGCTG | + |
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Preference number: 4 (lower is better) Translates to: TRLASKSEIACLCFPECQSSWAV*NFWRML Trigger: CAGCATCCTCCAAAAGTTTCAGACTGCCCAAGAACT...CTGGCACTCAGGAAAGCAGAGGCAGGCGATCTCTGACTTTGAGGCCAGTCTGGT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000057325.15 |
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| CDS-3UTR GCA 90 bp | CTCAGCCTCCCACGTGCTGGGATTTCCAGGCCTGAGCTTCCAGACAGTCTTTGCGCCAGTCTCAGTGCCTaGTCATTTTTCCTCATTAAC | + |
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Preference number: 4 (lower is better) Translates to: LSLPRAGISRPELPDSLCASLSA*SFFLIN Trigger: GTTAATGAGGAAAAATGAGCAGGCACTGAGACTGGC...GCAAAGACTGTCTGGAAGCTCAGGCCTGGAAATCCCAGCACGTGGGAGGCTGAG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000057325.15 |
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| CDS-3UTR CCA 90 bp | CTGGTCTCGAACTTAGAAATCCGCCTGCCTCTGCCTCCTGAGTGTGTGTGTGTGGAACCAGTTTCCGAGTaGATGCTGCCATTTTGGCAC | + |
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Preference number: 4 (lower is better) Translates to: LVSNLEIRLPLPPECVCVEPVSE*MLPFWH Trigger: GTGCCAAAATGGCAGCATCCACTCGGAAACTGGTTC...CACACACACACACTCAGGAGGCAGAGGCAGGCGGATTTCTAAGTTCGAGACCAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000057325.15 |
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| CDS-3UTR CCA 90 bp | AGCCTCCCACGTGCTGGGATTTCCAGGCCTGAGCTTCCAGACAGTCTTTGCAGTTCTTGCATATTGTCTTaGTCTTCAGCGCCCTTGGAG | + |
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Preference number: 4 (lower is better) Translates to: SLPRAGISRPELPDSLCSSCILS*SSAPLE Trigger: CTCCAAGGGCGCTGAAGACCAAGACAATATGCAAGA...ACTGCAAAGACTGTCTGGAAGCTCAGGCCTGGAAATCCCAGCACGTGGGAGGCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000057325.15 |
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| CDS-3UTR TCA 90 bp | AGCCTCCCACGTGCTGGGATTTCCAGGCCTGAGCTTCCAGACAGTCTTTGCAGTACTTCAGATTCTCTCTaGGGACTGCATTGTCACAGT | + |
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Preference number: 4 (lower is better) Translates to: SLPRAGISRPELPDSLCSTSDSL*GLHCHS Trigger: ACTGTGACAATGCAGTCCTCAGAGAGAATCTGAAGT...ACTGCAAAGACTGTCTGGAAGCTCAGGCCTGGAAATCCCAGCACGTGGGAGGCT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000057325.15 |
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| CDS-3UTR TCA 90 bp | CGCCCGAGCGAGCATGTAACTAACCTTTCTCTGATGTGCAAGGGCTTCTTCTTTAAGCCACTCTCCTCCTaGCCCATCTTCTGCTCCTTG | + |
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Preference number: 4 (lower is better) Translates to: RPSEHVTNLSLMCKGFFFKPLSS*PIFCSL Trigger: CAAGGAGCAGAAGATGGGTCAGGAGGAGAGTGGCTT...AAAGAAGAAGCCCTTGCACATCAGAGAAAGGTTAGTTACATGCTCGCTCGGGCG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000170347.4 |
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| CDS-3UTR TCA 90 bp | TTAGAAATCCGCCTGCCTCTGCCTCCTGAGTGTGTGTGTGTGTGCTACCACGCCGCTCAAAAGCAATCCTaGATGCATCTGCCGTTATGT | + |
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Preference number: 4 (lower is better) Translates to: LEIRLPLPPECVCVCYHAAQKQS*MHLPLC Trigger: ACATAACGGCAGATGCATTCAGGATTGCTTTTGAGC...GGCGTGGTAGCACACACACACACACTCAGGAGGCAGAGGCAGGCGGATTTCTAA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000057325.15 |
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| CDS-3UTR GCA 90 bp | TTAGAAATCCGCCTGCCTCTGCCTCCTGAGTGTGTGTGTGTGTGCTACCACGCCGGCTTTGCCAAGCATTaGCATGCTTTGGAGGATTTT | + |
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Preference number: 4 (lower is better) Translates to: LEIRLPLPPECVCVCYHAGFAKH*HALEDF Trigger: AAAATCCTCCAAAGCATGGCAATGCTTGGCAAAGCC...GGCGTGGTAGCACACACACACACACTCAGGAGGCAGAGGCAGGCGGATTTCTAA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000057325.15 |
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| CDS-3UTR GCA 90 bp | GCCTCTGCTTTCCTGAGTGCCAGGGTTAAAGGCGTGCGCCACCATGGACTGACCTCTTCCTTACTCTTCTaGAGAGTTTCCAACTCATGT | + |
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Preference number: 4 (lower is better) Translates to: ASAFLSARVKGVRHHGLTSSLLF*RVSNSC Trigger: ACATGAGTTGGAAACTCTGCAGAAGAGTAAGGAAGA...GGTCAGTCCATGGTGGCGCACGCCTTTAACCCTGGCACTCAGGAAAGCAGAGGC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000057325.15 |
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| CDS-3UTR GCA 90 bp | GCCTCCCACGTGCTGGGATTTCCAGGCCTGAGCTTCCAGACAGTCTTTGCAGTGATCCCCAGTAATCTTTaGCCTAAGGTCTTCTTTCTC | + |
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Preference number: 4 (lower is better) Translates to: ASHVLGFPGLSFQTVFAVIPSNL*PKVFFL Trigger: GAGAAAGAAGACCTTAGGGCAAAGATTACTGGGGAT...CACTGCAAAGACTGTCTGGAAGCTCAGGCCTGGAAATCCCAGCACGTGGGAGGC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000057325.15 |
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| CDS-3UTR CCA 90 bp | GTCTTTGTCTTCCAGCGCCCGAGCGAGCATGTAACTAACCTTTCTCTGATGTGCTGGATGCTGCCATTTTaGCACAAGAACAGGGGCTCC | + |
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Preference number: 4 (lower is better) Translates to: VFVFQRPSEHVTNLSLMCWMLPF*HKNRGS Trigger: GGAGCCCCTGTTCTTGTGCCAAAATGGCAGCATCCA...GCACATCAGAGAAAGGTTAGTTACATGCTCGCTCGGGCGCTGGAAGACAAAGAC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000170347.4 |
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| CDS-3UTR TCA 90 bp | ATTTCCAGGCCTGAGCTTCCAGACAGTCTTTGCAGTGCTGAACATCAGACCCAACCATCTTCTGCTCCTTaGTATCAAGCATGGCGAGGG | + |
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Preference number: 4 (lower is better) Translates to: ISRPELPDSLCSAEHQTQPSSAP*YQAWRG Trigger: CCCTCGCCATGCTTGATATCAAGGAGCAGAAGATGG...TTGGGTCTGATGTTCAGCACTGCAAAGACTGTCTGGAAGCTCAGGCCTGGAAAT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000057325.15 |
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| CDS-3UTR GCA 90 bp | TCGCCTGCCTCTGCTTTCCTGAGTGCCAGGGTTAAAGGCGTGCGCCACCATGGAGAAACTTTTGGAGGATaGTGTATTGAACAGATGCAA | + |
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Preference number: 4 (lower is better) Translates to: SPASAFLSARVKGVRHHGETFGG*CIEQMQ Trigger: TTGCATCTGTTCAATACAGCATCCTCCAAAAGTTTC...TCCATGGTGGCGCACGCCTTTAACCCTGGCACTCAGGAAAGCAGAGGCAGGCGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000057325.15 |
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| CDS-3UTR CCA 90 bp | AGCCTCCCACGTGCTGGGATTTCCAGGCCTGAGCTTCCAGACAGTCTTTGCAGTTTCCTCCTGGAATACTaGAAACTGGTTTCGCTTCTT | + |
|
Preference number: 4 (lower is better) Translates to: SLPRAGISRPELPDSLCSFLLEY*KLVSLL Trigger: AAGAAGCGAAACCAGTTTCCAGTATTCCAGGAGGAA...ACTGCAAAGACTGTCTGGAAGCTCAGGCCTGGAAATCCCAGCACGTGGGAGGCT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000057325.15 |
||
| CDS-3UTR CCA 90 bp | AGCCTCCCACGTGCTGGGATTTCCAGGCCTGAGCTTCCAGACAGTCTTTGCAGTAGCATTGCCATGCTTTaGAGGATTTTCAATGCTTCC | + |
|
Preference number: 4 (lower is better) Translates to: SLPRAGISRPELPDSLCSSIAML*RIFNAS Trigger: GGAAGCATTGAAAATCCTCCAAAGCATGGCAATGCT...ACTGCAAAGACTGTCTGGAAGCTCAGGCCTGGAAATCCCAGCACGTGGGAGGCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000057325.15 |
||
| CDS-3UTR CCA 90 bp | CGTGTCTTTGTCTTCCAGCGCCCGAGCGAGCATGTAACTAACCTTTCTCTGATGGAACCAGTTTCCGAGTaGATGCTGCCATTTTGGCAC | + |
|
Preference number: 4 (lower is better) Translates to: RVFVFQRPSEHVTNLSLMEPVSE*MLPFWH Trigger: GTGCCAAAATGGCAGCATCCACTCGGAAACTGGTTC...CATCAGAGAAAGGTTAGTTACATGCTCGCTCGGGCGCTGGAAGACAAAGACACG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000170347.4 |
||
| CDS-3UTR GCA 90 bp | GTCTTTGTCTTCCAGCGCCCGAGCGAGCATGTAACTAACCTTTCTCTGATGTGCCAGTTTCCGAGTGGATaGTGCCATTTTGGCACAAGA | + |
|
Preference number: 4 (lower is better) Translates to: VFVFQRPSEHVTNLSLMCQFPSG*CHFGTR Trigger: TCTTGTGCCAAAATGGCAGCATCCACTCGGAAACTG...GCACATCAGAGAAAGGTTAGTTACATGCTCGCTCGGGCGCTGGAAGACAAAGAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000170347.4 |
||
| CDS-3UTR TCA 90 bp | CGTGTCTTTGTCTTCCAGCGCCCGAGCGAGCATGTAACTAACCTTTCTCTGATGCTCATCCGACAATTCTaGGTTAGAATCTGTGCTGCT | + |
|
Preference number: 4 (lower is better) Translates to: RVFVFQRPSEHVTNLSLMLIRQF*VRICAA Trigger: AGCAGCACAGATTCTAACTCAGAATTGTCGGATGAG...CATCAGAGAAAGGTTAGTTACATGCTCGCTCGGGCGCTGGAAGACAAAGACACG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000170347.4 |
||
| CDS-3UTR TCA 90 bp | CGCCCGAGCGAGCATGTAACTAACCTTTCTCTGATGTGCAAGGGCTTCTTCTTTAACTCATGTCTGAGCTaGAGAACCAGTTTCCGAGTG | + |
|
Preference number: 4 (lower is better) Translates to: RPSEHVTNLSLMCKGFFFNSCLS*RTSFRV Trigger: CACTCGGAAACTGGTTCTTCAGCTCAGACATGAGTT...AAAGAAGAAGCCCTTGCACATCAGAGAAAGGTTAGTTACATGCTCGCTCGGGCG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000170347.4 |
||
| CDS-3UTR TCA 90 bp | GTCTTTGTCTTCCAGCGCCCGAGCGAGCATGTAACTAACCTTTCTCTGATGTGCTTTCCAACTCATGTCTaGGCTGAAGAACCAGTTTCC | + |
|
Preference number: 4 (lower is better) Translates to: VFVFQRPSEHVTNLSLMCFPTHV*AEEPVS Trigger: GGAAACTGGTTCTTCAGCTCAGACATGAGTTGGAAA...GCACATCAGAGAAAGGTTAGTTACATGCTCGCTCGGGCGCTGGAAGACAAAGAC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000170347.4 |
||
| CDS-3UTR GCA 90 bp | TTAGAAATCCGCCTGCCTCTGCCTCCTGAGTGTGTGTGTGTGTGCTACCACGCCTTGGAGGATTTTCAATaGTTCCTCTTTACCTTCAAG | + |
|
Preference number: 4 (lower is better) Translates to: LEIRLPLPPECVCVCYHALEDFQ*FLFTFK Trigger: CTTGAAGGTAAAGAGGAAGCATTGAAAATCCTCCAA...GGCGTGGTAGCACACACACACACACTCAGGAGGCAGAGGCAGGCGGATTTCTAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000057325.15 |
||
| CDS-3UTR GCA 90 bp | GTCTTTGTCTTCCAGCGCCCGAGCGAGCATGTAACTAACCTTTCTCTGATGTGCGCCAGTCTCAGTGCCTaGTCATTTTTCCTCATTAAC | + |
|
Preference number: 4 (lower is better) Translates to: VFVFQRPSEHVTNLSLMCASLSA*SFFLIN Trigger: GTTAATGAGGAAAAATGAGCAGGCACTGAGACTGGC...GCACATCAGAGAAAGGTTAGTTACATGCTCGCTCGGGCGCTGGAAGACAAAGAC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000170347.4 |
||
| CDS-3UTR GCA 90 bp | CGCCCGAGCGAGCATGTAACTAACCTTTCTCTGATGTGCAAGGGCTTCTTCTTTTCCAGCCAGTCTCAGTaGCTGCTCATTTTTCCTCAT | + |
|
Preference number: 4 (lower is better) Translates to: RPSEHVTNLSLMCKGFFFSSQSQ*LLIFPH Trigger: ATGAGGAAAAATGAGCAGGCACTGAGACTGGCTGGA...AAAGAAGAAGCCCTTGCACATCAGAGAAAGGTTAGTTACATGCTCGCTCGGGCG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000170347.4 |
||
| CDS-3UTR GCA 90 bp | GCCTCCCACGTGCTGGGATTTCCAGGCCTGAGCTTCCAGACAGTCTTTGCAGTGATCTTAAAGACCTCTTaGATATTGTCTTGGTCTTCA | + |
|
Preference number: 4 (lower is better) Translates to: ASHVLGFPGLSFQTVFAVILKTS*ILSWSS Trigger: TGAAGACCAAGACAATATGCAAGAGGTCTTTAAGAT...CACTGCAAAGACTGTCTGGAAGCTCAGGCCTGGAAATCCCAGCACGTGGGAGGC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000057325.15 |
||
| CDS-3UTR CCA 90 bp | AGCCTCCCACGTGCTGGGATTTCCAGGCCTGAGCTTCCAGACAGTCTTTGCAGTAGCCTGTCACATTTCTaGATCCAAGATTCTTCTATA | + |
|
Preference number: 4 (lower is better) Translates to: SLPRAGISRPELPDSLCSSLSHF*IQDSSI Trigger: TATAGAAGAATCTTGGATCCAGAAATGTGACAGGCT...ACTGCAAAGACTGTCTGGAAGCTCAGGCCTGGAAATCCCAGCACGTGGGAGGCT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000057325.15 |
||
| CDS-3UTR TCA 90 bp | CGCCCGAGCGAGCATGTAACTAACCTTTCTCTGATGTGCAAGGGCTTCTTCTTTACTTCAGATTCTCTCTaGGGACTGCATTGTCACAGT | + |
|
Preference number: 4 (lower is better) Translates to: RPSEHVTNLSLMCKGFFFTSDSL*GLHCHS Trigger: ACTGTGACAATGCAGTCCTCAGAGAGAATCTGAAGT...AAAGAAGAAGCCCTTGCACATCAGAGAAAGGTTAGTTACATGCTCGCTCGGGCG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000170347.4 |
||
| CDS-3UTR TCA 90 bp | TTTGTCTTCCAGCGCCCGAGCGAGCATGTAACTAACCTTTCTCTGATGTGCAAGGCTCAAAAGCAATCCTaGATGCATCTGCCGTTATGT | + |
|
Preference number: 4 (lower is better) Translates to: FVFQRPSEHVTNLSLMCKAQKQS*MHLPLC Trigger: ACATAACGGCAGATGCATTCAGGATTGCTTTTGAGC...CTTGCACATCAGAGAAAGGTTAGTTACATGCTCGCTCGGGCGCTGGAAGACAAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000170347.4 |
||
| CDS-3UTR GCA 90 bp | ATTTCCAGGCCTGAGCTTCCAGACAGTCTTTGCAGTGCTGAACATCAGACCCAATTTCCGAGTGGATGCTaGCATTTTGGCACAAGAACA | + |
|
Preference number: 4 (lower is better) Translates to: ISRPELPDSLCSAEHQTQFPSGC*HFGTRT Trigger: TGTTCTTGTGCCAAAATGGCAGCATCCACTCGGAAA...TTGGGTCTGATGTTCAGCACTGCAAAGACTGTCTGGAAGCTCAGGCCTGGAAAT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000057325.15 |
||
| CDS-3UTR GCA 90 bp | TTTGTCTTCCAGCGCCCGAGCGAGCATGTAACTAACCTTTCTCTGATGTGCAAGTTTCCGAGTGGATGCTaGCATTTTGGCACAAGAACA | + |
|
Preference number: 4 (lower is better) Translates to: FVFQRPSEHVTNLSLMCKFPSGC*HFGTRT Trigger: TGTTCTTGTGCCAAAATGGCAGCATCCACTCGGAAA...CTTGCACATCAGAGAAAGGTTAGTTACATGCTCGCTCGGGCGCTGGAAGACAAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000170347.4 |
||
| CDS-3UTR GCA 90 bp | GTCTTTGTCTTCCAGCGCCCGAGCGAGCATGTAACTAACCTTTCTCTGATGTGCTCATTCAACATCGTCTaGCTGGTGTTGTCTGTTGAT | + |
|
Preference number: 4 (lower is better) Translates to: VFVFQRPSEHVTNLSLMCSFNIV*LVLSVD Trigger: ATCAACAGACAACACCAGGCAGACGATGTTGAATGA...GCACATCAGAGAAAGGTTAGTTACATGCTCGCTCGGGCGCTGGAAGACAAAGAC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000170347.4 |
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| CDS-3UTR CCA 90 bp | TTTGTCTTCCAGCGCCCGAGCGAGCATGTAACTAACCTTTCTCTGATGTGCAAGGAAAGCCCTTCCTCCTaGAATACTGGAAACTGGTTT | + |
|
Preference number: 4 (lower is better) Translates to: FVFQRPSEHVTNLSLMCKESPSS*NTGNWF Trigger: AAACCAGTTTCCAGTATTCCAGGAGGAAGGGCTTTC...CTTGCACATCAGAGAAAGGTTAGTTACATGCTCGCTCGGGCGCTGGAAGACAAA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000170347.4 |
||
| CDS-3UTR GCA 90 bp | CGTGTCTTTGTCTTCCAGCGCCCGAGCGAGCATGTAACTAACCTTTCTCTGATGTCTTCCTTACTCTTCTaGAGAGTTTCCAACTCATGT | + |
|
Preference number: 4 (lower is better) Translates to: RVFVFQRPSEHVTNLSLMSSLLF*RVSNSC Trigger: ACATGAGTTGGAAACTCTGCAGAAGAGTAAGGAAGA...CATCAGAGAAAGGTTAGTTACATGCTCGCTCGGGCGCTGGAAGACAAAGACACG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000170347.4 |
||
| CDS-3UTR CCA 90 bp | TTTGTCTTCCAGCGCCCGAGCGAGCATGTAACTAACCTTTCTCTGATGTGCAAGTTCCTCCTGGAATACTaGAAACTGGTTTCGCTTCTT | + |
|
Preference number: 4 (lower is better) Translates to: FVFQRPSEHVTNLSLMCKFLLEY*KLVSLL Trigger: AAGAAGCGAAACCAGTTTCCAGTATTCCAGGAGGAA...CTTGCACATCAGAGAAAGGTTAGTTACATGCTCGCTCGGGCGCTGGAAGACAAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000170347.4 |
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| CDS-3UTR CCA 90 bp | GTCTTTGTCTTCCAGCGCCCGAGCGAGCATGTAACTAACCTTTCTCTGATGTGCAGCCTGTCACATTTCTaGATCCAAGATTCTTCTATA | + |
|
Preference number: 4 (lower is better) Translates to: VFVFQRPSEHVTNLSLMCSLSHF*IQDSSI Trigger: TATAGAAGAATCTTGGATCCAGAAATGTGACAGGCT...GCACATCAGAGAAAGGTTAGTTACATGCTCGCTCGGGCGCTGGAAGACAAAGAC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000170347.4 |
||
| CDS-3UTR GCA 90 bp | TTTGTCTTCCAGCGCCCGAGCGAGCATGTAACTAACCTTTCTCTGATGTGCAAGTTGGAGGATTTTCAATaGTTCCTCTTTACCTTCAAG | + |
|
Preference number: 4 (lower is better) Translates to: FVFQRPSEHVTNLSLMCKLEDFQ*FLFTFK Trigger: CTTGAAGGTAAAGAGGAAGCATTGAAAATCCTCCAA...CTTGCACATCAGAGAAAGGTTAGTTACATGCTCGCTCGGGCGCTGGAAGACAAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000170347.4 |
||
| CDS-3UTR GCA 90 bp | TTTGTCTTCCAGCGCCCGAGCGAGCATGTAACTAACCTTTCTCTGATGTGCAAGAGGCATTTATTTCCATaGTTTGGAGGATTTTCAATG | + |
|
Preference number: 4 (lower is better) Translates to: FVFQRPSEHVTNLSLMCKRHLFP*FGGFSM Trigger: CATTGAAAATCCTCCAAAGCATGGAAATAAATGCCT...CTTGCACATCAGAGAAAGGTTAGTTACATGCTCGCTCGGGCGCTGGAAGACAAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000170347.4 |
||
| CDS-3UTR CAA 90 bp | AAATCCGCCTGCCTCTGCCTCCTGAGTGTGTGTGTGTGTGCTACCACGCCCGGCCCCATCTTCTGCTCCTaGATATCAAGCATGGCGAGG | + |
|
Preference number: 5 (lower is better) Translates to: KSACLCLLSVCVCATTPGPIFCS*ISSMAR Trigger: CCTCGCCATGCTTGATATCAAGGAGCAGAAGATGGG...GCCGGGCGTGGTAGCACACACACACACACTCAGGAGGCAGAGGCAGGCGGATTT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000057325.15 |
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| CDS TCA 90 bp | GATGCTGCCATTTTGGCACAAGAACAGGGGCTCCCTCCAGGACCATaGCACAGGCAGGCTCCAAGGACTGCAAGCTCGAGACCTGATACA | + |
|
Preference number: 5 (lower is better) Translates to: DAAILAQEQGLPPGP*HRQAPRTASSRPDT Trigger: TGTATCAGGTCTCGAGCTTGCAGTCCTTGGAGCCTGCCTGTGTCATGGTCCTGGAGGGAGCCCCTGTTCTTGTGCCAAAATGGCAGCATC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000057325.15 ENSMUST00000170347.4 |
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| CDS GCA 90 bp | TGCCGGATATCCATCGTCTGCCTGGTGTTGTCTGTTGATCCACGTTaGCGCTCTTTTACACAGGTCCCCTCCAGCCAGTCTCAGTGCCTG | + |
|
Preference number: 5 (lower is better) Translates to: CRISIVCLVLSVDPR*RSFTQVPSSQSQCL Trigger: CAGGCACTGAGACTGGCTGGAGGGGACCTGTGTAAAAGAGCGGCAACGTGGATCAACAGACAACACCAGGCAGACGATGGATATCCGGCA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000057325.15 |
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| CDS-3UTR CAA 90 bp | GCCTCCCACGTGCTGGGATTTCCAGGCCTGAGCTTCCAGACAGTCTTTGCAGTGCTCAGCGCTTGTATCTaGAAAGCCCTTCCTCCTGGA | + |
|
Preference number: 5 (lower is better) Translates to: ASHVLGFPGLSFQTVFAVLSACI*KALPPG Trigger: TCCAGGAGGAAGGGCTTTCAAGATACAAGCGCTGAG...CACTGCAAAGACTGTCTGGAAGCTCAGGCCTGGAAATCCCAGCACGTGGGAGGC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000057325.15 |
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| CDS-3UTR CAA 90 bp | TTAGAAATCCGCCTGCCTCTGCCTCCTGAGTGTGTGTGTGTGTGCTACCACGCCGAAACGGAGGAGGGCTaGAGTTCTTTCCATCTGACC | + |
|
Preference number: 5 (lower is better) Translates to: LEIRLPLPPECVCVCYHAETEEG*SSFHLT Trigger: GGTCAGATGGAAAGAACTCAAGCCCTCCTCCGTTTC...GGCGTGGTAGCACACACACACACACTCAGGAGGCAGAGGCAGGCGGATTTCTAA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000057325.15 |
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| CDS-3UTR CAA 90 bp | GCCTCTGCTTTCCTGAGTGCCAGGGTTAAAGGCGTGCGCCACCATGGACTGACCTCTCTGAGGACTGCATaGTCACAGTTTAGCCTGTCA | + |
|
Preference number: 5 (lower is better) Translates to: ASAFLSARVKGVRHHGLTSLRTA*SQFSLS Trigger: TGACAGGCTAAACTGTGACAATGCAGTCCTCAGAGA...GGTCAGTCCATGGTGGCGCACGCCTTTAACCCTGGCACTCAGGAAAGCAGAGGC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000057325.15 |
||
| CDS-3UTR CAA 90 bp | GGCCGTGTCTTTGTCTTCCAGCGCCCGAGCGAGCATGTAACTAACCTTTCTCTGGTGGATGCTGCCATTTaGGCACAAGAACAGGGGCTC | + |
|
Preference number: 5 (lower is better) Translates to: GRVFVFQRPSEHVTNLSLVDAAI*AQEQGL Trigger: GAGCCCCTGTTCTTGTGCCAAAATGGCAGCATCCAC...CAGAGAAAGGTTAGTTACATGCTCGCTCGGGCGCTGGAAGACAAAGACACGGCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000170347.4 |
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| CDS TCA 90 bp | AGGACCATGACACAGGCAGGCTCCAAGGACTGCAAGCTCGAGACCTaGTACATCTGTAAAGCCACTCTCCTCCTGACCCATCTTCTGCTC | + |
|
Preference number: 5 (lower is better) Translates to: RTMTQAGSKDCKLET*YICKATLLLTHLLL Trigger: GAGCAGAAGATGGGTCAGGAGGAGAGTGGCTTTACAGATGTATCAGGTCTCGAGCTTGCAGTCCTTGGAGCCTGCCTGTGTCATGGTCCT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000057325.15 ENSMUST00000170347.4 |
||
| CDS-3UTR CAA 90 bp | AGCCTCCCACGTGCTGGGATTTCCAGGCCTGAGCTTCCAGACAGTCTTTGCAGTCTCTTGCATATTGTCTaGGTCTTCAGCGCCCTTGGA | + |
|
Preference number: 5 (lower is better) Translates to: SLPRAGISRPELPDSLCSLLHIV*VFSALG Trigger: TCCAAGGGCGCTGAAGACCAAGACAATATGCAAGAG...ACTGCAAAGACTGTCTGGAAGCTCAGGCCTGGAAATCCCAGCACGTGGGAGGCT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000057325.15 |
||
| CDS-3UTR CAA 90 bp | GCCTCCCACGTGCTGGGATTTCCAGGCCTGAGCTTCCAGACAGTCTTTGCAGTGTTGGAGGATGCTGTATaGAACAGATGCAAGCCATGG | + |
|
Preference number: 5 (lower is better) Translates to: ASHVLGFPGLSFQTVFAVLEDAV*NRCKPW Trigger: CCATGGCTTGCATCTGTTCAATACAGCATCCTCCAA...CACTGCAAAGACTGTCTGGAAGCTCAGGCCTGGAAATCCCAGCACGTGGGAGGC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000057325.15 |
||
| CDS-3UTR CAA 90 bp | TCGCCTGCCTCTGCTTTCCTGAGTGCCAGGGTTAAAGGCGTGCGCCACCATGGAGGCAGTCTGAAACTTTaGGAGGATGCTGTATTGAAC | + |
|
Preference number: 5 (lower is better) Translates to: SPASAFLSARVKGVRHHGGSLKL*EDAVLN Trigger: GTTCAATACAGCATCCTCCAAAAGTTTCAGACTGCC...TCCATGGTGGCGCACGCCTTTAACCCTGGCACTCAGGAAAGCAGAGGCAGGCGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000057325.15 |
||
| CDS TCA 90 bp | ACTGCAAGCTCGAGACCTGATACATCTGTAAAGCCACTCTCCTCCTaGCCCATCTTCTGCTCCTTGATATCAAGCATGGCGAGGGCCTCC | + |
|
Preference number: 5 (lower is better) Translates to: TASSRPDTSVKPLSS*PIFCSLISSMARAS Trigger: GGAGGCCCTCGCCATGCTTGATATCAAGGAGCAGAAGATGGGTCAGGAGGAGAGTGGCTTTACAGATGTATCAGGTCTCGAGCTTGCAGT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000057325.15 ENSMUST00000170347.4 |
||
| CDS-3UTR CAA 90 bp | AGCCTCCCACGTGCTGGGATTTCCAGGCCTGAGCTTCCAGACAGTCTTTGCAGTTGGCTTTGCCAAGCATaGCCATGCTTTGGAGGATTT | + |
|
Preference number: 5 (lower is better) Translates to: SLPRAGISRPELPDSLCSWLCQA*PCFGGF Trigger: AAATCCTCCAAAGCATGGCAATGCTTGGCAAAGCCA...ACTGCAAAGACTGTCTGGAAGCTCAGGCCTGGAAATCCCAGCACGTGGGAGGCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000057325.15 |
||
| CDS GCA 90 bp | TTCCAACTCATGTCTGAGCTGAAGAACCAGTTTCCGAGTGGATGCTaGCATTTTGGCACAAGAACAGGGGCTCCCTCCAGGACCATGACA | + |
|
Preference number: 5 (lower is better) Translates to: FQLMSELKNQFPSGC*HFGTRTGAPSRTMT Trigger: TGTCATGGTCCTGGAGGGAGCCCCTGTTCTTGTGCCAAAATGGCAGCATCCACTCGGAAACTGGTTCTTCAGCTCAGACATGAGTTGGAA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000057325.15 ENSMUST00000170347.4 |
||
| CDS GCA 90 bp | AGTTTCCAACTCATGTCTGAGCTGAAGAACCAGTTTCCGAGTGGATaGTGCCATTTTGGCACAAGAACAGGGGCTCCCTCCAGGACCATG | + |
|
Preference number: 5 (lower is better) Translates to: SFQLMSELKNQFPSG*CHFGTRTGAPSRTM Trigger: CATGGTCCTGGAGGGAGCCCCTGTTCTTGTGCCAAAATGGCAGCATCCACTCGGAAACTGGTTCTTCAGCTCAGACATGAGTTGGAAACT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000057325.15 ENSMUST00000170347.4 |
||
| CDS-3UTR CAA 90 bp | CGTGTCTTTGTCTTCCAGCGCCCGAGCGAGCATGTAACTAACCTTTCTCTGATGGAAACGGAGGAGGGCTaGAGTTCTTTCCATCTGACC | + |
|
Preference number: 5 (lower is better) Translates to: RVFVFQRPSEHVTNLSLMETEEG*SSFHLT Trigger: GGTCAGATGGAAAGAACTCAAGCCCTCCTCCGTTTC...CATCAGAGAAAGGTTAGTTACATGCTCGCTCGGGCGCTGGAAGACAAAGACACG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000170347.4 |
||
| CDS GCA 90 bp | GCGCCCTTGGAGCTGTTTTCCGAAGGGAGTATCCCCAGTAATCTTTaGCCTAAGGTCTTCTTTCTCCTTTGTGCCGGATATCCATCGTCT | + |
|
Preference number: 5 (lower is better) Translates to: APLELFSEGSIPSNL*PKVFFLLCAGYPSS Trigger: AGACGATGGATATCCGGCACAAAGGAGAAAGAAGACCTTAGGGCAAAGATTACTGGGGATACTCCCTTCGGAAAACAGCTCCAAGGGCGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000057325.15 |
||
| CDS-3UTR CAA 90 bp | GTCTTTGTCTTCCAGCGCCCGAGCGAGCATGTAACTAACCTTTCTCTGATGTGCTTTCTTCTCCCTTTCTaGGAAACGGAGGAGGGCTTG | + |
|
Preference number: 5 (lower is better) Translates to: VFVFQRPSEHVTNLSLMCFLLPF*ETEEGL Trigger: CAAGCCCTCCTCCGTTTCCAAGAAAGGGAGAAGAAA...GCACATCAGAGAAAGGTTAGTTACATGCTCGCTCGGGCGCTGGAAGACAAAGAC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000170347.4 |
||
| CDS-3UTR CAA 90 bp | CGCCCGAGCGAGCATGTAACTAACCTTTCTCTGATGTGCAAGGGCTTCTTCTTTCCCATCTTCTGCTCCTaGATATCAAGCATGGCGAGG | + |
|
Preference number: 5 (lower is better) Translates to: RPSEHVTNLSLMCKGFFFPIFCS*ISSMAR Trigger: CCTCGCCATGCTTGATATCAAGGAGCAGAAGATGGG...AAAGAAGAAGCCCTTGCACATCAGAGAAAGGTTAGTTACATGCTCGCTCGGGCG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000170347.4 |
||
| CDS-3UTR CAA 90 bp | TTAGAAATCCGCCTGCCTCTGCCTCCTGAGTGTGTGTGTGTGTGCTACCACGCCGCAAGGGCTTCTTCTTaGTCATTCAACAAATCTACC | + |
|
Preference number: 5 (lower is better) Translates to: LEIRLPLPPECVCVCYHAARASS*SFNKST Trigger: GGTAGATTTGTTGAATGACAAAGAAGAAGCCCTTGC...GGCGTGGTAGCACACACACACACACTCAGGAGGCAGAGGCAGGCGGATTTCTAA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000057325.15 |
||
| CDS-3UTR CAA 90 bp | ATTTCCAGGCCTGAGCTTCCAGACAGTCTTTGCAGTGCTGAACATCAGACCCAATTTCTTCTCCCTTTCTaGGAAACGGAGGAGGGCTTG | + |
|
Preference number: 5 (lower is better) Translates to: ISRPELPDSLCSAEHQTQFLLPF*ETEEGL Trigger: CAAGCCCTCCTCCGTTTCCAAGAAAGGGAGAAGAAA...TTGGGTCTGATGTTCAGCACTGCAAAGACTGTCTGGAAGCTCAGGCCTGGAAAT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000057325.15 |
||
| CDS-3UTR CAA 90 bp | GTCTTTGTCTTCCAGCGCCCGAGCGAGCATGTAACTAACCTTTCTCTGATGTGCTCTCTGAGGACTGCATaGTCACAGTTTAGCCTGTCA | + |
|
Preference number: 5 (lower is better) Translates to: VFVFQRPSEHVTNLSLMCSLRTA*SQFSLS Trigger: TGACAGGCTAAACTGTGACAATGCAGTCCTCAGAGA...GCACATCAGAGAAAGGTTAGTTACATGCTCGCTCGGGCGCTGGAAGACAAAGAC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000170347.4 |
||
| CDS-3UTR CAA 90 bp | ATGTCTACCTCTGAGCTCCGTTTCCAGCTCCAACATCTGACTTTTAAGAATCTCGTGGATGCTGCCATTTaGGCACAAGAACAGGGGCTC | + |
|
Preference number: 5 (lower is better) Translates to: MSTSELRFQLQHLTFKNLVDAAI*AQEQGL Trigger: GAGCCCCTGTTCTTGTGCCAAAATGGCAGCATCCAC...GAGATTCTTAAAAGTCAGATGTTGGAGCTGGAAACGGAGCTCAGAGGTAGACAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000057325.15 |
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| CDS GCA 90 bp | GTCTTCCAGCGCCCGAGCGAGCATGTAACTAACCTTTCTCTGATGTaGAAGGGCTTCTTCTTTGTCATTCAACAAATCTACCAGCATCTT | + |
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Preference number: 5 (lower is better) Translates to: VFQRPSEHVTNLSLM*KGFFFVIQQIYQHL Trigger: AAGATGCTGGTAGATTTGTTGAATGACAAAGAAGAAGCCCTTGCACATCAGAGAAAGGTTAGTTACATGCTCGCTCGGGCGCTGGAAGAC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000057325.15 |
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| CDS-3UTR CAA 90 bp | ATTTCCAGGCCTGAGCTTCCAGACAGTCTTTGCAGTGCTGAACATCAGACCCAAAAGCATTGCCATGCTTaGGAGGATTTTCAATGCTTC | + |
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Preference number: 5 (lower is better) Translates to: ISRPELPDSLCSAEHQTQKHCHA*EDFQCF Trigger: GAAGCATTGAAAATCCTCCAAAGCATGGCAATGCTT...TTGGGTCTGATGTTCAGCACTGCAAAGACTGTCTGGAAGCTCAGGCCTGGAAAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000057325.15 |
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| CDS GCA 90 bp | ATTAACTGTTGCTCAAAAGCAATCCTGAATGCATCTGCCGTTATGTaGGCCTCTTCCTTACTCTTCTGCAGAGTTTCCAACTCATGTCTG | + |
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Preference number: 5 (lower is better) Translates to: INCCSKAILNASAVM*ASSLLFCRVSNSCL Trigger: CAGACATGAGTTGGAAACTCTGCAGAAGAGTAAGGAAGAGGCGCACATAACGGCAGATGCATTCAGGATTGCTTTTGAGCAACAGTTAAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000057325.15 ENSMUST00000170347.4 |
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| CDS TCA 90 bp | GCTTCAAGTTCCGTTTTTAAAATCTCTACGTCCTCTAAGGCTTCATaGAGACGTCGCCTTAACTGCTCATCCGACAATTCTGAGTTAGAA | + |
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Preference number: 5 (lower is better) Translates to: ASSSVFKISTSSKAS*RRRLNCSSDNSELE Trigger: TTCTAACTCAGAATTGTCGGATGAGCAGTTAAGGCGACGTCTTCATGAAGCCTTAGAGGACGTAGAGATTTTAAAAACGGAACTTGAAGC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000057325.15 ENSMUST00000170347.4 |
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| CDS GCA 90 bp | TCTTCTTTGTCATTCAACAAATCTACCAGCATCTTAAAGACCTCTTaGATATTGTCTTGGTCTTCAGCGCCCTTGGAGCTGTTTTCCGAA | + |
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Preference number: 5 (lower is better) Translates to: SSLSFNKSTSILKTS*ILSWSSAPLELFSE Trigger: TTCGGAAAACAGCTCCAAGGGCGCTGAAGACCAAGACAATATGCAAGAGGTCTTTAAGATGCTGGTAGATTTGTTGAATGACAAAGAAGA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000057325.15 |
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| CDS GCA 90 bp | CAGGATCTTTTAAGAGTTCTTGGGCAGTCTGAAACTTTTGGAGGATaGTGTATTGAACAGATGCAAGCCATGGGTTCAGAAACATGGTTT | + |
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Preference number: 5 (lower is better) Translates to: QDLLRVLGQSETFGG*CIEQMQAMGSETWF Trigger: AAACCATGTTTCTGAACCCATGGCTTGCATCTGTTCAATACAGCATCCTCCAAAAGTTTCAGACTGCCCAAGAACTCTTAAAAGATCCTG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000057325.15 |
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| CDS TCA 72 bp | ATTTTGGCACAAGAACAGGGGCTCCCTCCAGGACCATaGCACAGGCAGGCTCCAAGGACTGCAAGCTCGAGA | + |
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Preference number: 6 (lower is better) Translates to: ILAQEQGLPPGP*HRQAPRTASSR Trigger: TCTCGAGCTTGCAGTCCTTGGAGCCTGCCTGTGTCATGGTCCTGGAGGGAGCCCCTGTTCTTGTGCCAAAAT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000057325.15 ENSMUST00000170347.4 |
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| CDS CCA 72 bp | GCTGAAGAACCAGTTTCCGAGTGGATGCTGCCATTTTaGCACAAGAACAGGGGCTCCCTCCAGGACCATGAC | + |
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Preference number: 6 (lower is better) Translates to: AEEPVSEWMLPF*HKNRGSLQDHD Trigger: GTCATGGTCCTGGAGGGAGCCCCTGTTCTTGTGCCAAAATGGCAGCATCCACTCGGAAACTGGTTCTTCAGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000057325.15 ENSMUST00000170347.4 |
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| CDS TCA 72 bp | ACACAGGCAGGCTCCAAGGACTGCAAGCTCGAGACCTaGTACATCTGTAAAGCCACTCTCCTCCTGACCCAT | + |
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Preference number: 6 (lower is better) Translates to: TQAGSKDCKLET*YICKATLLLTH Trigger: ATGGGTCAGGAGGAGAGTGGCTTTACAGATGTATCAGGTCTCGAGCTTGCAGTCCTTGGAGCCTGCCTGTGT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000057325.15 ENSMUST00000170347.4 |
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| CDS GCA 72 bp | ATGTCTGAGCTGAAGAACCAGTTTCCGAGTGGATGCTaGCATTTTGGCACAAGAACAGGGGCTCCCTCCAGG | + |
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Preference number: 6 (lower is better) Translates to: MSELKNQFPSGC*HFGTRTGAPSR Trigger: CCTGGAGGGAGCCCCTGTTCTTGTGCCAAAATGGCAGCATCCACTCGGAAACTGGTTCTTCAGCTCAGACAT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000057325.15 ENSMUST00000170347.4 |
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| CDS GCA 72 bp | CTCATGTCTGAGCTGAAGAACCAGTTTCCGAGTGGATaGTGCCATTTTGGCACAAGAACAGGGGCTCCCTCC | + |
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Preference number: 6 (lower is better) Translates to: LMSELKNQFPSG*CHFGTRTGAPS Trigger: GGAGGGAGCCCCTGTTCTTGTGCCAAAATGGCAGCATCCACTCGGAAACTGGTTCTTCAGCTCAGACATGAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000057325.15 ENSMUST00000170347.4 |
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| CDS CAA 72 bp | TGCTGCTCAGTCTGGATGCTCGGTATCCCTCAGCGCTaGTATCTTGAAAGCCCTTCCTCCTGGAATACTGGA | + |
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Preference number: 6 (lower is better) Translates to: CCSVWMLGIPQR*YLESPSSWNTG Trigger: TCCAGTATTCCAGGAGGAAGGGCTTTCAAGATACAAGCGCTGAGGGATACCGAGCATCCAGACTGAGCAGCA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000057325.15 ENSMUST00000170347.4 |
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| CDS CAA 90 bp | TGTGCTGCTCAGTCTGGATGCTCGGTATCCCTCAGCGCTTGTATCTaGAAAGCCCTTCCTCCTGGAATACTGGAAACTGGTTTCGCTTCT | + |
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Preference number: 6 (lower is better) Translates to: CAAQSGCSVSLSACI*KALPPGILETGFAS Trigger: AGAAGCGAAACCAGTTTCCAGTATTCCAGGAGGAAGGGCTTTCAAGATACAAGCGCTGAGGGATACCGAGCATCCAGACTGAGCAGCACA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000057325.15 ENSMUST00000170347.4 |
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| CDS CAA 72 bp | CAGTCTGGATGCTCGGTATCCCTCAGCGCTTGTATCTaGAAAGCCCTTCCTCCTGGAATACTGGAAACTGGT | + |
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Preference number: 6 (lower is better) Translates to: QSGCSVSLSACI*KALPPGILETG Trigger: ACCAGTTTCCAGTATTCCAGGAGGAAGGGCTTTCAAGATACAAGCGCTGAGGGATACCGAGCATCCAGACTG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000057325.15 ENSMUST00000170347.4 |
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| CDS TCA 72 bp | TCGAGACCTGATACATCTGTAAAGCCACTCTCCTCCTaGCCCATCTTCTGCTCCTTGATATCAAGCATGGCG | + |
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Preference number: 6 (lower is better) Translates to: SRPDTSVKPLSS*PIFCSLISSMA Trigger: CGCCATGCTTGATATCAAGGAGCAGAAGATGGGTCAGGAGGAGAGTGGCTTTACAGATGTATCAGGTCTCGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000057325.15 ENSMUST00000170347.4 |
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| CDS GCA 72 bp | TGCTCAAAAGCAATCCTGAATGCATCTGCCGTTATGTaGGCCTCTTCCTTACTCTTCTGCAGAGTTTCCAAC | + |
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Preference number: 6 (lower is better) Translates to: CSKAILNASAVM*ASSLLFCRVSN Trigger: GTTGGAAACTCTGCAGAAGAGTAAGGAAGAGGCGCACATAACGGCAGATGCATTCAGGATTGCTTTTGAGCA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000057325.15 ENSMUST00000170347.4 |
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| CDS GCA 72 bp | GAGCTGTTTTCCGAAGGGAGTATCCCCAGTAATCTTTaGCCTAAGGTCTTCTTTCTCCTTTGTGCCGGATAT | + |
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Preference number: 6 (lower is better) Translates to: ELFSEGSIPSNL*PKVFFLLCAGY Trigger: ATATCCGGCACAAAGGAGAAAGAAGACCTTAGGGCAAAGATTACTGGGGATACTCCCTTCGGAAAACAGCTC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000057325.15 |
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| CDS GCA 72 bp | CGCCCGAGCGAGCATGTAACTAACCTTTCTCTGATGTaGAAGGGCTTCTTCTTTGTCATTCAACAAATCTAC | + |
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Preference number: 6 (lower is better) Translates to: RPSEHVTNLSLM*KGFFFVIQQIY Trigger: GTAGATTTGTTGAATGACAAAGAAGAAGCCCTTGCACATCAGAGAAAGGTTAGTTACATGCTCGCTCGGGCG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000057325.15 |
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| CDS GCA 72 bp | TCATTCAACAAATCTACCAGCATCTTAAAGACCTCTTaGATATTGTCTTGGTCTTCAGCGCCCTTGGAGCTG | + |
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Preference number: 6 (lower is better) Translates to: SFNKSTSILKTS*ILSWSSAPLEL Trigger: CAGCTCCAAGGGCGCTGAAGACCAAGACAATATGCAAGAGGTCTTTAAGATGCTGGTAGATTTGTTGAATGA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000057325.15 |
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| CDS CCA 72 bp | CTTTTGGAGGATGCTGTATTGAACAGATGCAAGCCATaGGTTCAGAAACATGGTTTGACTGTACTGGATCAC | + |
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Preference number: 6 (lower is better) Translates to: LLEDAVLNRCKP*VQKHGLTVLDH Trigger: GTGATCCAGTACAGTCAAACCATGTTTCTGAACCCATGGCTTGCATCTGTTCAATACAGCATCCTCCAAAAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000057325.15 |
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| CDS CAA 72 bp | AACAAATCTACCAGCATCTTAAAGACCTCTTGCATATaGTCTTGGTCTTCAGCGCCCTTGGAGCTGTTTTCC | + |
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Preference number: 6 (lower is better) Translates to: NKSTSILKTSCI*SWSSAPLELFS Trigger: GGAAAACAGCTCCAAGGGCGCTGAAGACCAAGACAATATGCAAGAGGTCTTTAAGATGCTGGTAGATTTGTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000057325.15 |
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| CDS CAA 72 bp | GTCATTCAACAAATCTACCAGCATCTTAAAGACCTCTaGCATATTGTCTTGGTCTTCAGCGCCCTTGGAGCT | + |
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Preference number: 6 (lower is better) Translates to: VIQQIYQHLKDL*HIVLVFSALGA Trigger: AGCTCCAAGGGCGCTGAAGACCAAGACAATATGCAAGAGGTCTTTAAGATGCTGGTAGATTTGTTGAATGAC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000057325.15 |
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| CDS CAA 72 bp | TTCTTGGGCAGTCTGAAACTTTTGGAGGATGCTGTATaGAACAGATGCAAGCCATGGGTTCAGAAACATGGT | + |
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Preference number: 6 (lower is better) Translates to: FLGSLKLLEDAV*NRCKPWVQKHG Trigger: ACCATGTTTCTGAACCCATGGCTTGCATCTGTTCAATACAGCATCCTCCAAAAGTTTCAGACTGCCCAAGAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000057325.15 |
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| CDS TCA 72 bp | CATTTTTCCTCATTAACTGTTGCTCAAAAGCAATCCTaGATGCATCTGCCGTTATGTGCGCCTCTTCCTTAC | + |
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Preference number: 6 (lower is better) Translates to: HFSSLTVAQKQS*MHLPLCAPLPY Trigger: GTAAGGAAGAGGCGCACATAACGGCAGATGCATTCAGGATTGCTTTTGAGCAACAGTTAATGAGGAAAAATG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000057325.15 ENSMUST00000170347.4 |
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| CDS GCA 72 bp | TTAAGAGTTCTTGGGCAGTCTGAAACTTTTGGAGGATaGTGTATTGAACAGATGCAAGCCATGGGTTCAGAA | + |
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Preference number: 6 (lower is better) Translates to: LRVLGQSETFGG*CIEQMQAMGSE Trigger: TTCTGAACCCATGGCTTGCATCTGTTCAATACAGCATCCTCCAAAAGTTTCAGACTGCCCAAGAACTCTTAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000057325.15 |
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| CDS CAA 72 bp | TCTGTTCTCAACTTCAGATTCTCTCTGAGGACTGCATaGTCACAGTTTAGCCTGTCACATTTCTGGATCCAA | + |
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Preference number: 6 (lower is better) Translates to: SVLNFRFSLRTA*SQFSLSHFWIQ Trigger: TTGGATCCAGAAATGTGACAGGCTAAACTGTGACAATGCAGTCCTCAGAGAGAATCTGAAGTTGAGAACAGA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000057325.15 ENSMUST00000170347.4 |
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| CDS CAA 90 bp | GGCATTTATTTCCTTCTCCAGAGATCTCTTTTGTTCTATAGTTTTTaGAAGCATTGTCTGTGTGTGGCTTGTGGCTTTGCCAAGCATTGC | + |
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Preference number: 6 (lower is better) Translates to: GIYFLLQRSLLFYSF*KHCLCVACGFAKHC Trigger: GCAATGCTTGGCAAAGCCACAAGCCACACACAGACAATGCTTCAAAAAACTATAGAACAAAAGAGATCTCTGGAGAAGGAAATAAATGCC 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000057325.15 |
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