Pregenerated sensors for CCDC124 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000007721Ensembl transcript IDs: ENSMUST00000007865.7, ENSMUST00000212680.2
Found 67 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | GATGACCTATGGCGCAGCTGGGAGAATCCCAGGCCCGGAACTCTATaGATCCCTGGTCAGGCCTGGCTGGAGGGGGATGAGCTGACTCAG | + |
|
Preference number: 1 (lower is better) Translates to: DDLWRSWENPRPGTL*IPGQAWLEGDELTQ Trigger: CTGAGTCAGCTCATCCCCCTCCAGCCAGGCCTGACCAGGGATTCATAGAGTTCCGGGCCTGGGATTCTCCCAGCTGCGCCATAGGTCATC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000007865.7 |
||
| 3UTR CAA 90 bp | GCAGGGCTCACGGGGACTAGGATGTCAGAGCAGGGACCCTCTGGGTaGTTGAGGATGACCTATGGCGCAGCTGGGAGAATCCCAGGCCCG | + |
|
Preference number: 2 (lower is better) Translates to: AGLTGTRMSEQGPSG*LRMTYGAAGRIPGP Trigger: CGGGCCTGGGATTCTCCCAGCTGCGCCATAGGTCATCCTCAACAACCCAGAGGGTCCCTGCTCTGACATCCTAGTCCCCGTGAGCCCTGC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000007865.7 |
||
| 3UTR TCA 72 bp | TGGCGCAGCTGGGAGAATCCCAGGCCCGGAACTCTATaGATCCCTGGTCAGGCCTGGCTGGAGGGGGATGAG | + |
|
Preference number: 3 (lower is better) Translates to: WRSWENPRPGTL*IPGQAWLEGDE Trigger: CTCATCCCCCTCCAGCCAGGCCTGACCAGGGATTCATAGAGTTCCGGGCCTGGGATTCTCCCAGCTGCGCCA 64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000007865.7 |
||
| 3UTR TCA 72 bp | TCTATGAATCCCTGGTCAGGCCTGGCTGGAGGGGGATaGGCTGACTCAGACAAGCTGGACTCAGCCTGGTTC | + |
|
Preference number: 3 (lower is better) Translates to: SMNPWSGLAGGG*ADSDKLDSAWF Trigger: GAACCAGGCTGAGTCCAGCTTGTCTGAGTCAGCTCATCCCCCTCCAGCCAGGCCTGACCAGGGATTCATAGA 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000007865.7 |
||
| CDS-3UTR GCA 90 bp | GGTCAGGCCTGGCTGGAGGGGGATGAGCTGACTCAGACAAGCTGGACTCAGCCTTGCGCGCCTCCACGCTaGCCTCTTCCTGCAGGCGCC | + |
|
Preference number: 4 (lower is better) Translates to: GQAWLEGDELTQTSWTQPCAPPR*PLPAGA Trigger: GGCGCCTGCAGGAAGAGGGCAGCGTGGAGGCGCGCA...AGGCTGAGTCCAGCTTGTCTGAGTCAGCTCATCCCCCTCCAGCCAGGCCTGACC 67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000007865.7 |
||
| CDS-3UTR GCA 90 bp | GCCTCGCCACAGCCTTTATTGGGAGGGTACTCCACTGGGCTCTGCAGGGCTCACTGGCGTCCTCCACAGTaGGCGCCTCCACGCTGCCCT | + |
|
Preference number: 4 (lower is better) Translates to: ASPQPLLGGYSTGLCRAHWRPPQ*APPRCP Trigger: AGGGCAGCGTGGAGGCGCGCACTGTGGAGGACGCCA...GTGAGCCCTGCAGAGCCCAGTGGAGTACCCTCCCAATAAAGGCTGTGGCGAGGC 66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000007865.7 |
||
| CDS-3UTR TCA 90 bp | ACTCCACTGGGCTCTGCAGGGCTCACGGGGACTAGGATGTCAGAGCAGGGACCCCTTCCTCAGCCACACTaGGCACTGCGATGGCGTCCT | + |
|
Preference number: 4 (lower is better) Translates to: TPLGSAGLTGTRMSEQGPLPQPH*ALRWRP Trigger: AGGACGCCATCGCAGTGCTCAGTGTGGCTGAGGAAG...GGGTCCCTGCTCTGACATCCTAGTCCCCGTGAGCCCTGCAGAGCCCAGTGGAGT 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000007865.7 |
||
| CDS-3UTR GCA 90 bp | GGTCAGGCCTGGCTGGAGGGGGATGAGCTGACTCAGACAAGCTGGACTCAGCCTGCTGCGTCTCCTTCTTaGGCTCCAGCTGCTCCAGGC | + |
|
Preference number: 4 (lower is better) Translates to: GQAWLEGDELTQTSWTQPAASPS*APAAPG Trigger: GCCTGGAGCAGCTGGAGCGCAAGAAGGAGACGCAGC...AGGCTGAGTCCAGCTTGTCTGAGTCAGCTCATCCCCCTCCAGCCAGGCCTGACC 63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000007865.7 |
||
| CDS-3UTR GCA 90 bp | GCCTCGCCACAGCCTTTATTGGGAGGGTACTCCACTGGGCTCTGCAGGGCTCACTCCTCCAGCAGGCGCTaGGTCTCCTTCTTGCGCTCC | + |
|
Preference number: 4 (lower is better) Translates to: ASPQPLLGGYSTGLCRAHSSSRR*VSFLRS Trigger: GGAGCGCAAGAAGGAGACGCAGCGCCTGCTGGAGGA...GTGAGCCCTGCAGAGCCCAGTGGAGTACCCTCCCAATAAAGGCTGTGGCGAGGC 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000007865.7 |
||
| CDS-3UTR CCA 90 bp | AGGGTACTCCACTGGGCTCTGCAGGGCTCACGGGGACTAGGATGTCAGAGCAGGAAGGGCAGGGCGCGCTaGTTCATCGGGTTGTCAGGG | + |
|
Preference number: 4 (lower is better) Translates to: RVLHWALQGSRGLGCQSRKGRAR*FIGLSG Trigger: CCCTGACAACCCGATGAACCAGCGCGCCCTGCCCTT...CCTGCTCTGACATCCTAGTCCCCGTGAGCCCTGCAGAGCCCAGTGGAGTACCCT 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000007865.7 |
||
| CDS-3UTR TCA 90 bp | GCCTGGCTGGAGGGGGATGAGCTGACTCAGACAAGCTGGACTCAGCCTGGTTCTGCCGCCTTTGAGCCGTaGGTCTTCCTCCTCCAGCAG | + |
|
Preference number: 4 (lower is better) Translates to: AWLEGDELTQTSWTQPGSAAFEP*VFLLQQ Trigger: CTGCTGGAGGAGGAAGACTCACGGCTCAAAGGCGGC...AGAACCAGGCTGAGTCCAGCTTGTCTGAGTCAGCTCATCCCCCTCCAGCCAGGC 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000007865.7 |
||
| CDS-3UTR TCA 90 bp | ACAGCCTTTATTGGGAGGGTACTCCACTGGGCTCTGCAGGGCTCACGGGGACTACGATCTGTGCACGTGTaGCCTTGGCGGGCGCCACAC | + |
|
Preference number: 4 (lower is better) Translates to: TAFIGRVLHWALQGSRGLRSVHV*PWRAPH Trigger: GTGTGGCGCCCGCCAAGGTCACACGTGCACAGATCG...TAGTCCCCGTGAGCCCTGCAGAGCCCAGTGGAGTACCCTCCCAATAAAGGCTGT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000007865.7 |
||
| CDS-3UTR GCA 90 bp | ACAGCCTTTATTGGGAGGGTACTCCACTGGGCTCTGCAGGGCTCACGGGGACTAACTGGCTCTGCCCGCTaGTCTCTCCGCAGCGAGTCC | + |
|
Preference number: 4 (lower is better) Translates to: TAFIGRVLHWALQGSRGLTGSAR*SLRSES Trigger: GGACTCGCTGCGGAGAGAGCAGCGGGCAGAGCCAGT...TAGTCCCCGTGAGCCCTGCAGAGCCCAGTGGAGTACCCTCCCAATAAAGGCTGT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000007865.7 |
||
| CDS-3UTR GCA 90 bp | AGGGTACTCCACTGGGCTCTGCAGGGCTCACGGGGACTAGGATGTCAGAGCAGGAGCCACACTGAGCACTaGGATGGCGTCCTCCACAGT | + |
|
Preference number: 4 (lower is better) Translates to: RVLHWALQGSRGLGCQSRSHTEH*DGVLHS Trigger: ACTGTGGAGGACGCCATCGCAGTGCTCAGTGTGGCT...CCTGCTCTGACATCCTAGTCCCCGTGAGCCCTGCAGAGCCCAGTGGAGTACCCT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000007865.7 |
||
| CDS-3UTR GCA 90 bp | CCACAGCCTTTATTGGGAGGGTACTCCACTGGGCTCTGCAGGGCTCACGGGGACAGCAGCTGCTTCAGTTaGGACAGCCGCATGTTGGGG | + |
|
Preference number: 4 (lower is better) Translates to: PQPLLGGYSTGLCRAHGDSSCFS*DSRMLG Trigger: CCCCAACATGCGGCTGTCGCAACTGAAGCAGCTGCT...GTCCCCGTGAGCCCTGCAGAGCCCAGTGGAGTACCCTCCCAATAAAGGCTGTGG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000007865.7 |
||
| CDS-3UTR CCA 90 bp | GCCTCGCCACAGCCTTTATTGGGAGGGTACTCCACTGGGCTCTGCAGGGCTCACGCTCCTTCTGTTTCTTaGCATCAGCGGCCGCCTTGG | + |
|
Preference number: 4 (lower is better) Translates to: ASPQPLLGGYSTGLCRAHAPSVS*HQRPPW Trigger: CCAAGGCGGCCGCTGATGCCAAGAAACAGAAGGAGC...GTGAGCCCTGCAGAGCCCAGTGGAGTACCCTCCCAATAAAGGCTGTGGCGAGGC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000007865.7 |
||
| CDS-3UTR CCA 90 bp | CCACAGCCTTTATTGGGAGGGTACTCCACTGGGCTCTGCAGGGCTCACGGGGACGCGACAGCCGCATGTTaGGGTTCTCCTGCTTCAACC | + |
|
Preference number: 4 (lower is better) Translates to: PQPLLGGYSTGLCRAHGDATAAC*GSPAST Trigger: GGTTGAAGCAGGAGAACCCCAACATGCGGCTGTCGC...GTCCCCGTGAGCCCTGCAGAGCCCAGTGGAGTACCCTCCCAATAAAGGCTGTGG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000007865.7 |
||
| CDS-3UTR GCA 90 bp | ACAGCCTTTATTGGGAGGGTACTCCACTGGGCTCTGCAGGGCTCACGGGGACTAGGGCAGCTGCCGACTTaGTGTTCTCGCCCTGGAACT | + |
|
Preference number: 4 (lower is better) Translates to: TAFIGRVLHWALQGSRGLGQLPT*CSRPGT Trigger: AGTTCCAGGGCGAGAACAGCAAGTCGGCAGCTGCCC...TAGTCCCCGTGAGCCCTGCAGAGCCCAGTGGAGTACCCTCCCAATAAAGGCTGT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000007865.7 |
||
| CDS-3UTR GCA 90 bp | AGGGTACTCCACTGGGCTCTGCAGGGCTCACGGGGACTAGGATGTCAGAGCAGGTCCTTCTTCAGCAGCTaGTTCAGTTGCGACAGCCGC | + |
|
Preference number: 4 (lower is better) Translates to: RVLHWALQGSRGLGCQSRSFFSS*FSCDSR Trigger: GCGGCTGTCGCAACTGAAGCAGCTGCTGAAGAAGGA...CCTGCTCTGACATCCTAGTCCCCGTGAGCCCTGCAGAGCCCAGTGGAGTACCCT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000007865.7 |
||
| CDS-3UTR GCA 90 bp | GGTCAGGCCTGGCTGGAGGGGGATGAGCTGACTCAGACAAGCTGGACTCAGCCTTTCTCCTCCTTGCGTTaGTCCTTCCGCATCACGTGT | + |
|
Preference number: 4 (lower is better) Translates to: GQAWLEGDELTQTSWTQPFSSLR*SFRITC Trigger: ACACGTGATGCGGAAGGAGCAACGCAAGGAGGAGAA...AGGCTGAGTCCAGCTTGTCTGAGTCAGCTCATCCCCCTCCAGCCAGGCCTGACC 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000007865.7 |
||
| CDS-3UTR GCA 90 bp | CCACAGCCTTTATTGGGAGGGTACTCCACTGGGCTCTGCAGGGCTCACGGGGACTCTCCTTCTCCTCCTTaGGTTGCTCCTTCCGCATCA | + |
|
Preference number: 4 (lower is better) Translates to: PQPLLGGYSTGLCRAHGDSPSPP*VAPSAS Trigger: TGATGCGGAAGGAGCAACGCAAGGAGGAGAAGGAGA...GTCCCCGTGAGCCCTGCAGAGCCCAGTGGAGTACCCTCCCAATAAAGGCTGTGG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000007865.7 |
||
| CDS-3UTR CCA 90 bp | CCACAGCCTTTATTGGGAGGGTACTCCACTGGGCTCTGCAGGGCTCACGGGGACAGTGGCAGCTCTAGGTaGCTCTTAGCCTTTTCCACT | + |
|
Preference number: 4 (lower is better) Translates to: PQPLLGGYSTGLCRAHGDSGSSR*LLAFST Trigger: AGTGGAAAAGGCTAAGAGCCACCTAGAGCTGCCACT...GTCCCCGTGAGCCCTGCAGAGCCCAGTGGAGTACCCTCCCAATAAAGGCTGTGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000007865.7 |
||
| CDS GCA 90 bp | CACTGGCTCTGCCCGCTGCTCTCTCCGCAGCGAGTCCTCGATCTGTaGACGTGTGACCTTGGCGGGCGCCACACGTGGGGCCTTGCCGCC | + |
|
Preference number: 5 (lower is better) Translates to: HWLCPLLSPQRVLDL*TCDLGGRHTWGLAA Trigger: GGCGGCAAGGCCCCACGTGTGGCGCCCGCCAAGGTCACACGTGCACAGATCGAGGACTCGCTGCGGAGAGAGCAGCGGGCAGAGCCAGTG 70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000007865.7 |
||
| CDS TCA 90 bp | CTCGCATCCGGCGCTCAGGATGCCGGTCAGCTTCCTCAGCCACACTaGGCACTGCGATGGCGTCCTCCACAGTGCGCGCCTCCACGCTGC | + |
|
Preference number: 5 (lower is better) Translates to: LASGAQDAGQLPQPH*ALRWRPPQCAPPRC Trigger: GCAGCGTGGAGGCGCGCACTGTGGAGGACGCCATCGCAGTGCTCAGTGTGGCTGAGGAAGCTGACCGGCATCCTGAGCGCCGGATGCGAG 68% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000007865.7 |
||
| CDS GCA 90 bp | CCGGCGCTCAGGATGCCGGTCAGCTTCCTCAGCCACACTGAGCACTaGGATGGCGTCCTCCACAGTGCGCGCCTCCACGCTGCCCTCTTC | + |
|
Preference number: 5 (lower is better) Translates to: PALRMPVSFLSHTEH*DGVLHSARLHAALF Trigger: GAAGAGGGCAGCGTGGAGGCGCGCACTGTGGAGGACGCCATCGCAGTGCTCAGTGTGGCTGAGGAAGCTGACCGGCATCCTGAGCGCCGG 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000007865.7 |
||
| CDS GCA 90 bp | GCGATGGCGTCCTCCACAGTGCGCGCCTCCACGCTGCCCTCTTCCTaGAGGCGCCGGTTAAGGTTCTCTTCCAGTGGCAGCTCTAGGTGG | + |
|
Preference number: 5 (lower is better) Translates to: AMASSTVRASTLPSS*RRRLRFSSSGSSRW Trigger: CCACCTAGAGCTGCCACTGGAAGAGAACCTTAACCGGCGCCTGCAGGAAGAGGGCAGCGTGGAGGCGCGCACTGTGGAGGACGCCATCGC 66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000007865.7 |
||
| CDS-3UTR CAA 90 bp | GCCTGGCTGGAGGGGGATGAGCTGACTCAGACAAGCTGGACTCAGCCTGGTTCTGCATCAGCGGCCGCCTaGGCTTCAGCCCTCCGTGCT | + |
|
Preference number: 5 (lower is better) Translates to: AWLEGDELTQTSWTQPGSASAAA*ASALRA Trigger: AGCACGGAGGGCTGAAGCCAAGGCGGCCGCTGATGC...AGAACCAGGCTGAGTCCAGCTTGTCTGAGTCAGCTCATCCCCCTCCAGCCAGGC 64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000007865.7 |
||
| CDS GCA 90 bp | TGCGACAGCCGCATGTTGGGGTTCTCCTGCTTCAACCGTGGCAGTTaGACCTCCTCAAACGCGGTGAAGGCCGCTCGCATCCGGCGCTCA | + |
|
Preference number: 5 (lower is better) Translates to: CDSRMLGFSCFNRGS*TSSNAVKAARIRRS Trigger: TGAGCGCCGGATGCGAGCGGCCTTCACCGCGTTTGAGGAGGTGCAACTGCCACGGTTGAAGCAGGAGAACCCCAACATGCGGCTGTCGCA 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000007865.7 |
||
| CDS-3UTR CAA 90 bp | ACAGCCTTTATTGGGAGGGTACTCCACTGGGCTCTGCAGGGCTCACGGGGACTACGCTGCGTCTCCTTCTaGCGCTCCAGCTGCTCCAGG | + |
|
Preference number: 5 (lower is better) Translates to: TAFIGRVLHWALQGSRGLRCVSF*RSSCSR Trigger: CCTGGAGCAGCTGGAGCGCAAGAAGGAGACGCAGCG...TAGTCCCCGTGAGCCCTGCAGAGCCCAGTGGAGTACCCTCCCAATAAAGGCTGT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000007865.7 |
||
| CDS GCA 90 bp | CTTCTGTTTCTTGGCATCAGCGGCCGCCTTGGCTTCAGCCCTCCGTaGTCGGGCAGCTGCCGACTTGCTGTTCTCGCCCTGGAACTTCTT | + |
|
Preference number: 5 (lower is better) Translates to: LLFLGISGRLGFSPP*SGSCRLAVLALELL Trigger: AAGAAGTTCCAGGGCGAGAACAGCAAGTCGGCAGCTGCCCGAGCACGGAGGGCTGAAGCCAAGGCGGCCGCTGATGCCAAGAAACAGAAG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000007865.7 |
||
| CDS GCA 90 bp | GGCAGCTCTAGGTGGCTCTTAGCCTTTTCCACTGGCTCTGCCCGCTaGTCTCTCCGCAGCGAGTCCTCGATCTGTGCACGTGTGACCTTG | + |
|
Preference number: 5 (lower is better) Translates to: GSSRWLLAFSTGSAR*SLRSESSICARVTL Trigger: CAAGGTCACACGTGCACAGATCGAGGACTCGCTGCGGAGAGAGCAGCGGGCAGAGCCAGTGGAAAAGGCTAAGAGCCACCTAGAGCTGCC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000007865.7 |
||
| CDS CCA 90 bp | CTTCAGTTGCGACAGCCGCATGTTGGGGTTCTCCTGCTTCAACCGTaGCAGTTGCACCTCCTCAAACGCGGTGAAGGCCGCTCGCATCCG | + |
|
Preference number: 5 (lower is better) Translates to: LQLRQPHVGVLLLQP*QLHLLKRGEGRSHP Trigger: CGGATGCGAGCGGCCTTCACCGCGTTTGAGGAGGTGCAACTGCCACGGTTGAAGCAGGAGAACCCCAACATGCGGCTGTCGCAACTGAAG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000007865.7 |
||
| CDS-3UTR CAA 90 bp | AGGGTACTCCACTGGGCTCTGCAGGGCTCACGGGGACTAGGATGTCAGAGCAGGAGCTCCTTCTGTTTCTaGGCATCAGCGGCCGCCTTG | + |
|
Preference number: 5 (lower is better) Translates to: RVLHWALQGSRGLGCQSRSSFCF*ASAAAL Trigger: CAAGGCGGCCGCTGATGCCAAGAAACAGAAGGAGCT...CCTGCTCTGACATCCTAGTCCCCGTGAGCCCTGCAGAGCCCAGTGGAGTACCCT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000007865.7 |
||
| CDS-3UTR CAA 90 bp | GGTCAGGCCTGGCTGGAGGGGGATGAGCTGACTCAGACAAGCTGGACTCAGCCTCTTCTCCTCCTTGCGTaGCTCCTTCCGCATCACGTG | + |
|
Preference number: 5 (lower is better) Translates to: GQAWLEGDELTQTSWTQPLLLLA*LLPHHV Trigger: CACGTGATGCGGAAGGAGCAACGCAAGGAGGAGAAG...AGGCTGAGTCCAGCTTGTCTGAGTCAGCTCATCCCCCTCCAGCCAGGCCTGACC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000007865.7 |
||
| CDS-3UTR CAA 90 bp | ACTCCACTGGGCTCTGCAGGGCTCACGGGGACTAGGATGTCAGAGCAGGGACCCTTCTCCTTCTCCTCCTaGCGTTGCTCCTTCCGCATC | + |
|
Preference number: 5 (lower is better) Translates to: TPLGSAGLTGTRMSEQGPFSFSS*RCSFRI Trigger: GATGCGGAAGGAGCAACGCAAGGAGGAGAAGGAGAA...GGGTCCCTGCTCTGACATCCTAGTCCCCGTGAGCCCTGCAGAGCCCAGTGGAGT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000007865.7 |
||
| CDS-3UTR CAA 90 bp | CCACAGCCTTTATTGGGAGGGTACTCCACTGGGCTCTGCAGGGCTCACGGGGACCTTCAACCGTGGCAGTaGCACCTCCTCAAACGCGGT | + |
|
Preference number: 5 (lower is better) Translates to: PQPLLGGYSTGLCRAHGDLQPWQ*HLLKRG Trigger: ACCGCGTTTGAGGAGGTGCAACTGCCACGGTTGAAG...GTCCCCGTGAGCCCTGCAGAGCCCAGTGGAGTACCCTCCCAATAAAGGCTGTGG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000007865.7 |
||
| CDS-3UTR CAA 90 bp | AGAATCCCAGGCCCGGAACTCTATGAATCCCTGGTCAGGCCTGGCTGGAGGGGGTGCGACAGCCGCATGTaGGGGTTCTCCTGCTTCAAC | + |
|
Preference number: 5 (lower is better) Translates to: RIPGPELYESLVRPGWRGCDSRM*GFSCFN Trigger: GTTGAAGCAGGAGAACCCCAACATGCGGCTGTCGCA...CCCCCTCCAGCCAGGCCTGACCAGGGATTCATAGAGTTCCGGGCCTGGGATTCT 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000007865.7 |
||
| CDS-3UTR CAA 90 bp | ACAGCCTTTATTGGGAGGGTACTCCACTGGGCTCTGCAGGGCTCACGGGGACTACGCTGGTTCATCGGGTaGTCAGGGGAGCGCAACCAC | + |
|
Preference number: 5 (lower is better) Translates to: TAFIGRVLHWALQGSRGLRWFIG*SGERNH Trigger: GTGGTTGCGCTCCCCTGACAACCCGATGAACCAGCG...TAGTCCCCGTGAGCCCTGCAGAGCCCAGTGGAGTACCCTCCCAATAAAGGCTGT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000007865.7 |
||
| CDS CCA 90 bp | AAGCATCTTCCAGCTCCTTCTGTTTCTTGGCATCAGCGGCCGCCTTaGCTTCAGCCCTCCGTGCTCGGGCAGCTGCCGACTTGCTGTTCT | + |
|
Preference number: 5 (lower is better) Translates to: KHLPAPSVSWHQRPP*LQPSVLGQLPTCCS Trigger: AGAACAGCAAGTCGGCAGCTGCCCGAGCACGGAGGGCTGAAGCCAAGGCGGCCGCTGATGCCAAGAAACAGAAGGAGCTGGAAGATGCTT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000007865.7 |
||
| CDS-3UTR CAA 90 bp | ACAGCCTTTATTGGGAGGGTACTCCACTGGGCTCTGCAGGGCTCACGGGGACTACAGCAGCTGCTTCAGTaGCGACAGCCGCATGTTGGG | + |
|
Preference number: 5 (lower is better) Translates to: TAFIGRVLHWALQGSRGLQQLLQ*RQPHVG Trigger: CCCAACATGCGGCTGTCGCAACTGAAGCAGCTGCTG...TAGTCCCCGTGAGCCCTGCAGAGCCCAGTGGAGTACCCTCCCAATAAAGGCTGT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000007865.7 |
||
| CDS CCA 90 bp | TGTCCTCATCCTTCCAGTAAGCATCTTCCAGCTCCTTCTGTTTCTTaGCATCAGCGGCCGCCTTGGCTTCAGCCCTCCGTGCTCGGGCAG | + |
|
Preference number: 5 (lower is better) Translates to: CPHPSSKHLPAPSVS*HQRPPWLQPSVLGQ Trigger: CTGCCCGAGCACGGAGGGCTGAAGCCAAGGCGGCCGCTGATGCCAAGAAACAGAAGGAGCTGGAAGATGCTTACTGGAAGGATGAGGACA 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000007865.7 |
||
| CDS GCA 90 bp | TTGTCAGGGGAGCGCAACCACTCCTTCTTCAGCAGCTGCTTCAGTTaGGACAGCCGCATGTTGGGGTTCTCCTGCTTCAACCGTGGCAGT | + |
|
Preference number: 5 (lower is better) Translates to: LSGERNHSFFSSCFS*DSRMLGFSCFNRGS Trigger: ACTGCCACGGTTGAAGCAGGAGAACCCCAACATGCGGCTGTCGCAACTGAAGCAGCTGCTGAAGAAGGAGTGGTTGCGCTCCCCTGACAA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000007865.7 |
||
| CDS GCA 90 bp | TTCATCGGGTTGTCAGGGGAGCGCAACCACTCCTTCTTCAGCAGCTaGTTCAGTTGCGACAGCCGCATGTTGGGGTTCTCCTGCTTCAAC | + |
|
Preference number: 5 (lower is better) Translates to: FIGLSGERNHSFFSS*FSCDSRMLGFSCFN Trigger: GTTGAAGCAGGAGAACCCCAACATGCGGCTGTCGCAACTGAAGCAGCTGCTGAAGAAGGAGTGGTTGCGCTCCCCTGACAACCCGATGAA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000007865.7 |
||
| CDS TCA 72 bp | CCTTGGCGGGCGCCACACGTGGGGCCTTGCCGCCTTTaGGCCGTGAGTCTTCCTCCTCCAGCAGGCGCTGCG | + |
|
Preference number: 6 (lower is better) Translates to: PWRAPHVGPCRL*AVSLPPPAGAA Trigger: CGCAGCGCCTGCTGGAGGAGGAAGACTCACGGCTCAAAGGCGGCAAGGCCCCACGTGTGGCGCCCGCCAAGG 71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000007865.7 |
||
| CDS TCA 72 bp | GCTCTCTCCGCAGCGAGTCCTCGATCTGTGCACGTGTaGCCTTGGCGGGCGCCACACGTGGGGCCTTGCCGC | + |
|
Preference number: 6 (lower is better) Translates to: ALSAASPRSVHV*PWRAPHVGPCR Trigger: GCGGCAAGGCCCCACGTGTGGCGCCCGCCAAGGTCACACGTGCACAGATCGAGGACTCGCTGCGGAGAGAGC 69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000007865.7 |
||
| CDS GCA 72 bp | TGCCCGCTGCTCTCTCCGCAGCGAGTCCTCGATCTGTaGACGTGTGACCTTGGCGGGCGCCACACGTGGGGC | + |
|
Preference number: 6 (lower is better) Translates to: CPLLSPQRVLDL*TCDLGGRHTWG Trigger: GCCCCACGTGTGGCGCCCGCCAAGGTCACACGTGCACAGATCGAGGACTCGCTGCGGAGAGAGCAGCGGGCA 69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000007865.7 |
||
| CDS CAA 72 bp | ACCTTGGCGGGCGCCACACGTGGGGCCTTGCCGCCTTaGAGCCGTGAGTCTTCCTCCTCCAGCAGGCGCTGC | + |
|
Preference number: 6 (lower is better) Translates to: TLAGATRGALPP*SRESSSSSRRC Trigger: GCAGCGCCTGCTGGAGGAGGAAGACTCACGGCTCAAAGGCGGCAAGGCCCCACGTGTGGCGCCCGCCAAGGT 69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000007865.7 |
||
| CDS CAA 90 bp | GCACGTGTGACCTTGGCGGGCGCCACACGTGGGGCCTTGCCGCCTTaGAGCCGTGAGTCTTCCTCCTCCAGCAGGCGCTGCGTCTCCTTC | + |
|
Preference number: 6 (lower is better) Translates to: ARVTLAGATRGALPP*SRESSSSSRRCVSF Trigger: GAAGGAGACGCAGCGCCTGCTGGAGGAGGAAGACTCACGGCTCAAAGGCGGCAAGGCCCCACGTGTGGCGCCCGCCAAGGTCACACGTGC 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000007865.7 |
||
| CDS CAA 90 bp | CGCTGCTCTCTCCGCAGCGAGTCCTCGATCTGTGCACGTGTGACCTaGGCGGGCGCCACACGTGGGGCCTTGCCGCCTTTGAGCCGTGAG | + |
|
Preference number: 6 (lower is better) Translates to: RCSLRSESSICARVT*AGATRGALPPLSRE Trigger: CTCACGGCTCAAAGGCGGCAAGGCCCCACGTGTGGCGCCCGCCAAGGTCACACGTGCACAGATCGAGGACTCGCTGCGGAGAGAGCAGCG 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000007865.7 |
||
| CDS GCA 72 bp | CTTGGCATCAGCGGCCGCCTTGGCTTCAGCCCTCCGTaGTCGGGCAGCTGCCGACTTGCTGTTCTCGCCCTG | + |
|
Preference number: 6 (lower is better) Translates to: LGISGRLGFSPP*SGSCRLAVLAL Trigger: CAGGGCGAGAACAGCAAGTCGGCAGCTGCCCGAGCACGGAGGGCTGAAGCCAAGGCGGCCGCTGATGCCAAG 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000007865.7 |
||
| CDS CAA 72 bp | CTCCGCAGCGAGTCCTCGATCTGTGCACGTGTGACCTaGGCGGGCGCCACACGTGGGGCCTTGCCGCCTTTG | + |
|
Preference number: 6 (lower is better) Translates to: LRSESSICARVT*AGATRGALPPL Trigger: CAAAGGCGGCAAGGCCCCACGTGTGGCGCCCGCCAAGGTCACACGTGCACAGATCGAGGACTCGCTGCGGAG 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000007865.7 |
||
| CDS TCA 72 bp | GGCGCTCAGGATGCCGGTCAGCTTCCTCAGCCACACTaGGCACTGCGATGGCGTCCTCCACAGTGCGCGCCT | + |
|
Preference number: 6 (lower is better) Translates to: GAQDAGQLPQPH*ALRWRPPQCAP Trigger: AGGCGCGCACTGTGGAGGACGCCATCGCAGTGCTCAGTGTGGCTGAGGAAGCTGACCGGCATCCTGAGCGCC 67% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000007865.7 |
||
| CDS GCA 72 bp | GGCCGCCTTGGCTTCAGCCCTCCGTGCTCGGGCAGCTaGCGACTTGCTGTTCTCGCCCTGGAACTTCTTGGG | + |
|
Preference number: 6 (lower is better) Translates to: GRLGFSPPCSGS*RLAVLALELLG Trigger: CCCAAGAAGTTCCAGGGCGAGAACAGCAAGTCGGCAGCTGCCCGAGCACGGAGGGCTGAAGCCAAGGCGGCC 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000007865.7 ENSMUST00000212680.2 |
||
| CDS GCA 72 bp | AACGCGGTGAAGGCCGCTCGCATCCGGCGCTCAGGATaGCGGTCAGCTTCCTCAGCCACACTGAGCACTGCG | + |
|
Preference number: 6 (lower is better) Translates to: NAVKAARIRRSG*RSASSATLSTA Trigger: CGCAGTGCTCAGTGTGGCTGAGGAAGCTGACCGGCATCCTGAGCGCCGGATGCGAGCGGCCTTCACCGCGTT 67% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000007865.7 |
||
| CDS GCA 72 bp | AGGATGCCGGTCAGCTTCCTCAGCCACACTGAGCACTaGGATGGCGTCCTCCACAGTGCGCGCCTCCACGCT | + |
|
Preference number: 6 (lower is better) Translates to: RMPVSFLSHTEH*DGVLHSARLHA Trigger: AGCGTGGAGGCGCGCACTGTGGAGGACGCCATCGCAGTGCTCAGTGTGGCTGAGGAAGCTGACCGGCATCCT 65% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000007865.7 |
||
| CDS CCA 72 bp | CCAGCTCCTTCTGTTTCTTGGCATCAGCGGCCGCCTTaGCTTCAGCCCTCCGTGCTCGGGCAGCTGCCGACT | + |
|
Preference number: 6 (lower is better) Translates to: PAPSVSWHQRPP*LQPSVLGQLPT Trigger: AGTCGGCAGCTGCCCGAGCACGGAGGGCTGAAGCCAAGGCGGCCGCTGATGCCAAGAAACAGAAGGAGCTGG 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000007865.7 |
||
| CDS CAA 72 bp | TCCAGCTCCTTCTGTTTCTTGGCATCAGCGGCCGCCTaGGCTTCAGCCCTCCGTGCTCGGGCAGCTGCCGAC | + |
|
Preference number: 6 (lower is better) Translates to: SSSFCFLASAAA*ASALRARAAAD Trigger: GTCGGCAGCTGCCCGAGCACGGAGGGCTGAAGCCAAGGCGGCCGCTGATGCCAAGAAACAGAAGGAGCTGGA 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000007865.7 |
||
| CDS CAA 90 bp | TTGCGACAGCCGCATGTTGGGGTTCTCCTGCTTCAACCGTGGCAGTaGCACCTCCTCAAACGCGGTGAAGGCCGCTCGCATCCGGCGCTC | + |
|
Preference number: 6 (lower is better) Translates to: LRQPHVGVLLLQPWQ*HLLKRGEGRSHPAL Trigger: GAGCGCCGGATGCGAGCGGCCTTCACCGCGTTTGAGGAGGTGCAACTGCCACGGTTGAAGCAGGAGAACCCCAACATGCGGCTGTCGCAA 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000007865.7 |
||
| CDS CCA 72 bp | CGACAGCCGCATGTTGGGGTTCTCCTGCTTCAACCGTaGCAGTTGCACCTCCTCAAACGCGGTGAAGGCCGC | + |
|
Preference number: 6 (lower is better) Translates to: RQPHVGVLLLQP*QLHLLKRGEGR Trigger: GCGGCCTTCACCGCGTTTGAGGAGGTGCAACTGCCACGGTTGAAGCAGGAGAACCCCAACATGCGGCTGTCG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000007865.7 |
||
| CDS CAA 72 bp | GGCGCATTAAAGGGCAGGGCGCGCTGGTTCATCGGGTaGTCAGGGGAGCGCAACCACTCCTTCTTCAGCAGC | + |
|
Preference number: 6 (lower is better) Translates to: GALKGRARWFIG*SGERNHSFFSS Trigger: GCTGCTGAAGAAGGAGTGGTTGCGCTCCCCTGACAACCCGATGAACCAGCGCGCCCTGCCCTTTAATGCGCC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000007865.7 |
||
| CDS GCA 72 bp | AGGTGGCTCTTAGCCTTTTCCACTGGCTCTGCCCGCTaGTCTCTCCGCAGCGAGTCCTCGATCTGTGCACGT | + |
|
Preference number: 6 (lower is better) Translates to: RWLLAFSTGSAR*SLRSESSICAR Trigger: ACGTGCACAGATCGAGGACTCGCTGCGGAGAGAGCAGCGGGCAGAGCCAGTGGAAAAGGCTAAGAGCCACCT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000007865.7 |
||
| CDS GCA 72 bp | CGCATGTTGGGGTTCTCCTGCTTCAACCGTGGCAGTTaGACCTCCTCAAACGCGGTGAAGGCCGCTCGCATC | + |
|
Preference number: 6 (lower is better) Translates to: RMLGFSCFNRGS*TSSNAVKAARI Trigger: GATGCGAGCGGCCTTCACCGCGTTTGAGGAGGTGCAACTGCCACGGTTGAAGCAGGAGAACCCCAACATGCG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000007865.7 |
||
| CDS CAA 72 bp | CCGCATGTTGGGGTTCTCCTGCTTCAACCGTGGCAGTaGCACCTCCTCAAACGCGGTGAAGGCCGCTCGCAT | + |
|
Preference number: 6 (lower is better) Translates to: PHVGVLLLQPWQ*HLLKRGEGRSH Trigger: ATGCGAGCGGCCTTCACCGCGTTTGAGGAGGTGCAACTGCCACGGTTGAAGCAGGAGAACCCCAACATGCGG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000007865.7 |
||
| CDS CCA 72 bp | CGCCGGTTAAGGTTCTCTTCCAGTGGCAGCTCTAGGTaGCTCTTAGCCTTTTCCACTGGCTCTGCCCGCTGC | + |
|
Preference number: 6 (lower is better) Translates to: RRLRFSSSGSSR*LLAFSTGSARC Trigger: GCAGCGGGCAGAGCCAGTGGAAAAGGCTAAGAGCCACCTAGAGCTGCCACTGGAAGAGAACCTTAACCGGCG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000007865.7 |
||
| CDS GCA 72 bp | GAGCGCAACCACTCCTTCTTCAGCAGCTGCTTCAGTTaGGACAGCCGCATGTTGGGGTTCTCCTGCTTCAAC | + |
|
Preference number: 6 (lower is better) Translates to: ERNHSFFSSCFS*DSRMLGFSCFN Trigger: GTTGAAGCAGGAGAACCCCAACATGCGGCTGTCGCAACTGAAGCAGCTGCTGAAGAAGGAGTGGTTGCGCTC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000007865.7 |
||
| CDS CAA 72 bp | TTCTTCAGCAGCTGCTTCAGTTGCGACAGCCGCATGTaGGGGTTCTCCTGCTTCAACCGTGGCAGTTGCACC | + |
|
Preference number: 6 (lower is better) Translates to: FFSSCFSCDSRM*GFSCFNRGSCT Trigger: GGTGCAACTGCCACGGTTGAAGCAGGAGAACCCCAACATGCGGCTGTCGCAACTGAAGCAGCTGCTGAAGAA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000007865.7 |
||
| CDS CAA 90 bp | AACCACTCCTTCTTCAGCAGCTGCTTCAGTTGCGACAGCCGCATGTaGGGGTTCTCCTGCTTCAACCGTGGCAGTTGCACCTCCTCAAAC | + |
|
Preference number: 6 (lower is better) Translates to: NHSFFSSCFSCDSRM*GFSCFNRGSCTSSN Trigger: GTTTGAGGAGGTGCAACTGCCACGGTTGAAGCAGGAGAACCCCAACATGCGGCTGTCGCAACTGAAGCAGCTGCTGAAGAAGGAGTGGTT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000007865.7 |
||