Pregenerated sensors for CCDC121 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000050625Ensembl transcript IDs: ENSMUST00000058825.5
Found 85 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | GTTCTAAATCTCCGGAATCTACAACAGCCCCAGGGACACAGACAGTaGGGATGTGGGTCCCAGACAAGGAGCACGACCCCATGCTGCAAC | + |
|
Preference number: 1 (lower is better) Translates to: VLNLRNLQQPQGHRQ*GCGSQTRSTTPCCN Trigger: GTTGCAGCATGGGGTCGTGCTCCTTGTCTGGGACCCACATCCTCACTGTCTGTGTCCCTGGGGCTGTTGTAGATTCCGGAGATTTAGAAC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000058825.5 |
||
| 3UTR CCA 90 bp | GCCCTTCCTGAAAGTGTGTTTCTATTTTCCACGAAGGATACTTTTTaGCTTGTAGATTATTCCCTGCGCCTCAATTCAGTTGCAGTAGCT | + |
|
Preference number: 1 (lower is better) Translates to: ALPESVFLFSTKDTF*LVDYSLRLNSVAVA Trigger: AGCTACTGCAACTGAATTGAGGCGCAGGGAATAATCTACAAGCCAAAAAGTATCCTTCGTGGAAAATAGAAACACACTTTCAGGAAGGGC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000058825.5 |
||
| 3UTR CCA 72 bp | TCTACAACAGCCCCAGGGACACAGACAGTGAGGATGTaGGTCCCAGACAAGGAGCACGACCCCATGCTGCAA | + |
|
Preference number: 3 (lower is better) Translates to: STTAPGTQTVRM*VPDKEHDPMLQ Trigger: TTGCAGCATGGGGTCGTGCTCCTTGTCTGGGACCCACATCCTCACTGTCTGTGTCCCTGGGGCTGTTGTAGA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000058825.5 |
||
| 3UTR TCA 72 bp | AGGAGCACGACCCCATGCTGCAACAACTGCCCTTCCTaGAAGTGTGTTTCTATTTTCCACGAAGGATACTTT | + |
|
Preference number: 3 (lower is better) Translates to: RSTTPCCNNCPS*KCVSIFHEGYF Trigger: AAAGTATCCTTCGTGGAAAATAGAAACACACTTTCAGGAAGGGCAGTTGTTGCAGCATGGGGTCGTGCTCCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000058825.5 |
||
| 3UTR-3UTR CAA 90 bp | ACAGTTCATCACAAATGCAAACCTGAAACCCTTCTAAACCAACAAACCCCTACACACGAAGGATACTTTTaGGCTTGTAGATTATTCCCT | + |
|
Preference number: 3 (lower is better) Translates to: TVHHKCKPETLLNQQTPTHEGYF*ACRLFP Trigger: AGGGAATAATCTACAAGCCAAAAAGTATCCTTCGTG...TGTAGGGGTTTGTTGGTTTAGAAGGGTTTCAGGTTTGCATTTGTGATGAACTGT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000058825.5 |
||
| 3UTR CCA 72 bp | GAAAGTGTGTTTCTATTTTCCACGAAGGATACTTTTTaGCTTGTAGATTATTCCCTGCGCCTCAATTCAGTT | + |
|
Preference number: 3 (lower is better) Translates to: ESVFLFSTKDTF*LVDYSLRLNSV Trigger: AACTGAATTGAGGCGCAGGGAATAATCTACAAGCCAAAAAGTATCCTTCGTGGAAAATAGAAACACACTTTC 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000058825.5 |
||
| 3UTR TCA 72 bp | TCGCCAACAATGTTAAAAGTAGATGATAAGGCACATTaGCAAGCTAAGTTACCCTTTAATCCTGTTGTTTTT | + |
|
Preference number: 3 (lower is better) Translates to: SPTMLKVDDKAH*QAKLPFNPVVF Trigger: AAAAACAACAGGATTAAAGGGTAACTTAGCTTGTCAATGTGCCTTATCATCTACTTTTAACATTGTTGGCGA 35% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000058825.5 |
||
| CDS-3UTR GCA 90 bp | GCCCCAGGGACACAGACAGTGAGGATGTGGGTCCCAGACAAGGAGCACGACCCCCCTTCTGGGTCTTTCTaGCCTGCAGGAGCTGGGCTT | + |
|
Preference number: 4 (lower is better) Translates to: APGTQTVRMWVPDKEHDPPSGSF*PAGAGL Trigger: AAGCCCAGCTCCTGCAGGGCAGAAAGACCCAGAAGG...GGGGTCGTGCTCCTTGTCTGGGACCCACATCCTCACTGTCTGTGTCCCTGGGGC 62% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000058825.5 |
||
| CDS-3UTR GCA 90 bp | GGGACACAGACAGTGAGGATGTGGGTCCCAGACAAGGAGCACGACCCCATGCTGCGCAGGAACTGGAAGTaGGCCTCCCGGTCCTTGGTC | + |
|
Preference number: 4 (lower is better) Translates to: GTQTVRMWVPDKEHDPMLRRNWK*ASRSLV Trigger: GACCAAGGACCGGGAGGCGCACTTCCAGTTCCTGCG...CAGCATGGGGTCGTGCTCCTTGTCTGGGACCCACATCCTCACTGTCTGTGTCCC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000058825.5 |
||
| CDS-3UTR TCA 90 bp | AGCCCCAGGGACACAGACAGTGAGGATGTGGGTCCCAGACAAGGAGCACGACCCTGCAGGAGCTGGGCTTaGAGAGCTGCGTTTCTCTGG | + |
|
Preference number: 4 (lower is better) Translates to: SPRDTDSEDVGPRQGARPCRSWA*RAAFLW Trigger: CCAGAGAAACGCAGCTCTTCAAGCCCAGCTCCTGCA...GGGTCGTGCTCCTTGTCTGGGACCCACATCCTCACTGTCTGTGTCCCTGGGGCT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000058825.5 |
||
| CDS-3UTR GCA 90 bp | GCCCCAGGGACACAGACAGTGAGGATGTGGGTCCCAGACAAGGAGCACGACCCCCCCAGCTCCATCAGATaGCACTCTTGCAGCTCCTTC | + |
|
Preference number: 4 (lower is better) Translates to: APGTQTVRMWVPDKEHDPPSSIR*HSCSSF Trigger: GAAGGAGCTGCAAGAGTGGCATCTGATGGAGCTGGG...GGGGTCGTGCTCCTTGTCTGGGACCCACATCCTCACTGTCTGTGTCCCTGGGGC 61% GC, longest homopolymer 7 nt, total homopolymer stretches 11 nt. Matches the following 1 transcripts: ENSMUST00000058825.5 |
||
| CDS-3UTR CCA 90 bp | AGCCCCAGGGACACAGACAGTGAGGATGTGGGTCCCAGACAAGGAGCACGACCCCAGAATGAGCCTGCTTaGCTGCTAGCGCCAAGGCCT | + |
|
Preference number: 4 (lower is better) Translates to: SPRDTDSEDVGPRQGARPQNEPA*LLAPRP Trigger: AGGCCTTGGCGCTAGCAGCCAAGCAGGCTCATTCTG...GGGTCGTGCTCCTTGTCTGGGACCCACATCCTCACTGTCTGTGTCCCTGGGGCT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000058825.5 |
||
| CDS-3UTR TCA 90 bp | CCAGGGACACAGACAGTGAGGATGTGGGTCCCAGACAAGGAGCACGACCCCATGCCACAGAACTCAGAATaGGCCTGCTTGGCTGCTAGC | + |
|
Preference number: 4 (lower is better) Translates to: PGTQTVRMWVPDKEHDPMPQNSE*ACLAAS Trigger: GCTAGCAGCCAAGCAGGCTCATTCTGAGTTCTGTGG...CATGGGGTCGTGCTCCTTGTCTGGGACCCACATCCTCACTGTCTGTGTCCCTGG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000058825.5 |
||
| CDS-3UTR GCA 90 bp | TCCGGAATCTACAACAGCCCCAGGGACACAGACAGTGAGGATGTGGGTCCCAGATCTAGGTACCACTGCTaGTCCTTCGCCAGCTGCCGG | + |
|
Preference number: 4 (lower is better) Translates to: SGIYNSPRDTDSEDVGPRSRYHC*SFASCR Trigger: CCGGCAGCTGGCGAAGGAGCAGCAGTGGTACCTAGA...TCTGGGACCCACATCCTCACTGTCTGTGTCCCTGGGGCTGTTGTAGATTCCGGA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000058825.5 |
||
| CDS-3UTR GCA 90 bp | GCCCCAGGGACACAGACAGTGAGGATGTGGGTCCCAGACAAGGAGCACGACCCCATCAGATGCCACTCTTaGAGCTCCTTCTCCATCAGT | + |
|
Preference number: 4 (lower is better) Translates to: APGTQTVRMWVPDKEHDPIRCHS*SSFSIS Trigger: ACTGATGGAGAAGGAGCTGCAAGAGTGGCATCTGAT...GGGGTCGTGCTCCTTGTCTGGGACCCACATCCTCACTGTCTGTGTCCCTGGGGC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000058825.5 |
||
| CDS-3UTR CCA 90 bp | AGCCCCAGGGACACAGACAGTGAGGATGTGGGTCCCAGACAAGGAGCACGACCCCGGCATTTGGTTTCTTaGATTTGCTGGCTCAGCTCC | + |
|
Preference number: 4 (lower is better) Translates to: SPRDTDSEDVGPRQGARPRHLVS*ICWLSS Trigger: GGAGCTGAGCCAGCAAATCCAAGAAACCAAATGCCG...GGGTCGTGCTCCTTGTCTGGGACCCACATCCTCACTGTCTGTGTCCCTGGGGCT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000058825.5 |
||
| CDS-3UTR GCA 90 bp | CCAGGGACACAGACAGTGAGGATGTGGGTCCCAGACAAGGAGCACGACCCCATGAGTGCCTGCAACTGCTaGTTCAAATCCTTCTGGGTC | + |
|
Preference number: 4 (lower is better) Translates to: PGTQTVRMWVPDKEHDPMSACNC*FKSFWV Trigger: GACCCAGAAGGATTTGAAGCAGCAGTTGCAGGCACT...CATGGGGTCGTGCTCCTTGTCTGGGACCCACATCCTCACTGTCTGTGTCCCTGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000058825.5 |
||
| CDS-3UTR GCA 90 bp | CATGCTGCAACAACTGCCCTTCCTGAAAGTGTGTTTCTATTTTCCACGAAGGATCGCTCGCGTTCTGCCTaGAGCCGCTGCCGCCCTCTG | + |
|
Preference number: 4 (lower is better) Translates to: HAATTALPESVFLFSTKDRSRSA*SRCRPL Trigger: CAGAGGGCGGCAGCGGCTGCAGGCAGAACGCGAGCG...ATCCTTCGTGGAAAATAGAAACACACTTTCAGGAAGGGCAGTTGTTGCAGCATG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000058825.5 |
||
| CDS-3UTR GCA 90 bp | GGGACACAGACAGTGAGGATGTGGGTCCCAGACAAGGAGCACGACCCCATGCTGTTGGTTTCTTGGATTTaGTGGCTCAGCTCCTTCATC | + |
|
Preference number: 4 (lower is better) Translates to: GTQTVRMWVPDKEHDPMLLVSWI*WLSSFI Trigger: GATGAAGGAGCTGAGCCAGCAAATCCAAGAAACCAA...CAGCATGGGGTCGTGCTCCTTGTCTGGGACCCACATCCTCACTGTCTGTGTCCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000058825.5 |
||
| CDS-3UTR GCA 90 bp | CGACCCCATGCTGCAACAACTGCCCTTCCTGAAAGTGTGTTTCTATTTTCCACGTTCGCCAGCTGCCGGTaGTTTTCCAGCTGGCTCCTC | + |
|
Preference number: 4 (lower is better) Translates to: RPHAATTALPESVFLFSTFASCR*FSSWLL Trigger: GAGGAGCCAGCTGGAAAAGCACCGGCAGCTGGCGAA...CGTGGAAAATAGAAACACACTTTCAGGAAGGGCAGTTGTTGCAGCATGGGGTCG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000058825.5 |
||
| CDS-3UTR CCA 90 bp | GGGACACAGACAGTGAGGATGTGGGTCCCAGACAAGGAGCACGACCCCATGCTGTATTCCATGAAAAGCTaGTTTTCAGCCTGCACACGG | + |
|
Preference number: 4 (lower is better) Translates to: GTQTVRMWVPDKEHDPMLYSMKS*FSACTR Trigger: CCGTGTGCAGGCTGAAAACCAGCTTTTCATGGAATA...CAGCATGGGGTCGTGCTCCTTGTCTGGGACCCACATCCTCACTGTCTGTGTCCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000058825.5 |
||
| CDS-3UTR GCA 90 bp | TCCGGAATCTACAACAGCCCCAGGGACACAGACAGTGAGGATGTGGGTCCCAGACTGGGCTTGAAGAGCTaGGTTTCTCTGGTTGTATCT | + |
|
Preference number: 4 (lower is better) Translates to: SGIYNSPRDTDSEDVGPRLGLKS*VSLVVS Trigger: AGATACAACCAGAGAAACGCAGCTCTTCAAGCCCAG...TCTGGGACCCACATCCTCACTGTCTGTGTCCCTGGGGCTGTTGTAGATTCCGGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000058825.5 |
||
| CDS-3UTR CCA 90 bp | AGCCCCAGGGACACAGACAGTGAGGATGTGGGTCCCAGACAAGGAGCACGACCCAACTTGCTTTTGATTTaGTGCTCAGCATGGTCTTTG | + |
|
Preference number: 4 (lower is better) Translates to: SPRDTDSEDVGPRQGARPNLLLI*CSAWSL Trigger: CAAAGACCATGCTGAGCACCAAATCAAAAGCAAGTT...GGGTCGTGCTCCTTGTCTGGGACCCACATCCTCACTGTCTGTGTCCCTGGGGCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000058825.5 |
||
| CDS-3UTR CCA 90 bp | CGACCCCATGCTGCAACAACTGCCCTTCCTGAAAGTGTGTTTCTATTTTCCACGCGGTGCTTTTCCAGCTaGCTCCTCACAGCATCCAAC | + |
|
Preference number: 4 (lower is better) Translates to: RPHAATTALPESVFLFSTRCFSS*LLTASN Trigger: GTTGGATGCTGTGAGGAGCCAGCTGGAAAAGCACCG...CGTGGAAAATAGAAACACACTTTCAGGAAGGGCAGTTGTTGCAGCATGGGGTCG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000058825.5 |
||
| CDS-3UTR GCA 90 bp | TTTTCCACGAAGGATACTTTTTGGCTTGTAGATTATTCCCTGCGCCTCAATTCATGGTGTTGGCGGGGGTaGATCTCCAGGGCTCTGGGC | + |
|
Preference number: 4 (lower is better) Translates to: FSTKDTFWLVDYSLRLNSWCWRG*ISRALG Trigger: GCCCAGAGCCCTGGAGATGCACCCCCGCCAACACCA...TGAATTGAGGCGCAGGGAATAATCTACAAGCCAAAAAGTATCCTTCGTGGAAAA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000058825.5 |
||
| CDS-3UTR CCA 90 bp | TCCGGAATCTACAACAGCCCCAGGGACACAGACAGTGAGGATGTGGGTCCCAGAATTTGGTGCTCAGCATaGTCTTTGAAGCTCTCTGTT | + |
|
Preference number: 4 (lower is better) Translates to: SGIYNSPRDTDSEDVGPRIWCSA*SLKLSV Trigger: AACAGAGAGCTTCAAAGACCATGCTGAGCACCAAAT...TCTGGGACCCACATCCTCACTGTCTGTGTCCCTGGGGCTGTTGTAGATTCCGGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000058825.5 |
||
| CDS-3UTR GCA 90 bp | CGACCCCATGCTGCAACAACTGCCCTTCCTGAAAGTGTGTTTCTATTTTCCACGTTCAGTGCCTGCAACTaGTGCTTCAAATCCTTCTGG | + |
|
Preference number: 4 (lower is better) Translates to: RPHAATTALPESVFLFSTFSACN*CFKSFW Trigger: CCAGAAGGATTTGAAGCAGCAGTTGCAGGCACTGAA...CGTGGAAAATAGAAACACACTTTCAGGAAGGGCAGTTGTTGCAGCATGGGGTCG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000058825.5 |
||
| CDS-3UTR TCA 90 bp | GTTTCTATTTTCCACGAAGGATACTTTTTGGCTTGTAGATTATTCCCTGCGCCTTCCTGGCTCAGTTGCTaGAGCTCCTTGCGTAGCTGC | + |
|
Preference number: 4 (lower is better) Translates to: VSIFHEGYFLACRLFPAPSWLSC*SSLRSC Trigger: GCAGCTACGCAAGGAGCTTCAGCAACTGAGCCAGGA...AGGCGCAGGGAATAATCTACAAGCCAAAAAGTATCCTTCGTGGAAAATAGAAAC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000058825.5 |
||
| CDS-3UTR CCA 90 bp | CTTCCTGAAAGTGTGTTTCTATTTTCCACGAAGGATACTTTTTGGCTTGTAGATGCCGCTGCCGCCCTCTaGTCAAGGCTTCTAGGTACC | + |
|
Preference number: 4 (lower is better) Translates to: LPESVFLFSTKDTFWLVDAAAAL*SRLLGT Trigger: GGTACCTAGAAGCCTTGACCAGAGGGCGGCAGCGGC...ATCTACAAGCCAAAAAGTATCCTTCGTGGAAAATAGAAACACACTTTCAGGAAG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000058825.5 |
||
| CDS-3UTR CCA 90 bp | CATGCTGCAACAACTGCCCTTCCTGAAAGTGTGTTTCTATTTTCCACGAAGGATTGCTTCAAATCCTTCTaGGTCTTTCTGCCCTGCAGG | + |
|
Preference number: 4 (lower is better) Translates to: HAATTALPESVFLFSTKDCFKSF*VFLPCR Trigger: CCTGCAGGGCAGAAAGACCCAGAAGGATTTGAAGCA...ATCCTTCGTGGAAAATAGAAACACACTTTCAGGAAGGGCAGTTGTTGCAGCATG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000058825.5 |
||
| CDS-3UTR CCA 90 bp | GTTTCTATTTTCCACGAAGGATACTTTTTGGCTTGTAGATTATTCCCTGCGCCTTCCTTGCGTAGCTGCTaGTTCTCCCTGTGGAGACTG | + |
|
Preference number: 4 (lower is better) Translates to: VSIFHEGYFLACRLFPAPSLRSC*FSLWRL Trigger: CAGTCTCCACAGGGAGAACCAGCAGCTACGCAAGGA...AGGCGCAGGGAATAATCTACAAGCCAAAAAGTATCCTTCGTGGAAAATAGAAAC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000058825.5 |
||
| CDS-3UTR GCA 90 bp | GTTTCTATTTTCCACGAAGGATACTTTTTGGCTTGTAGATTATTCCCTGCGCCTCCTCTAGTAGCTGCCTaGTGTCCTTCAGCAGCCTTT | + |
|
Preference number: 4 (lower is better) Translates to: VSIFHEGYFLACRLFPAPPLVAA*CPSAAF Trigger: AAAGGCTGCTGAAGGACAGCAGGCAGCTACTAGAGG...AGGCGCAGGGAATAATCTACAAGCCAAAAAGTATCCTTCGTGGAAAATAGAAAC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000058825.5 |
||
| CDS-3UTR TCA 90 bp | TTTTCCACGAAGGATACTTTTTGGCTTGTAGATTATTCCCTGCGCCTCAATTCAGCTCAGCATGGTCTTTaGAGCTCTCTGTTCCTTGAG | + |
|
Preference number: 4 (lower is better) Translates to: FSTKDTFWLVDYSLRLNSAQHGL*SSLFLE Trigger: CTCAAGGAACAGAGAGCTTCAAAGACCATGCTGAGC...TGAATTGAGGCGCAGGGAATAATCTACAAGCCAAAAAGTATCCTTCGTGGAAAA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000058825.5 |
||
| CDS-3UTR GCA 90 bp | ACAGTTCATCACAAATGCAAACCTGAAACCCTTCTAAACCAACAAACCCCTACAACTGGCTTCAGTGCCTaGAACTGCTGCTTCAAATCC | + |
|
Preference number: 4 (lower is better) Translates to: TVHHKCKPETLLNQQTPTTGFSA*NCCFKS Trigger: GGATTTGAAGCAGCAGTTGCAGGCACTGAAGCCAGT...TGTAGGGGTTTGTTGGTTTAGAAGGGTTTCAGGTTTGCATTTGTGATGAACTGT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000058825.5 |
||
| CDS-3UTR CCA 90 bp | ACAGTTCATCACAAATGCAAACCTGAAACCCTTCTAAACCAACAAACCCCTACAGTTTCTTGGATTTGCTaGCTCAGCTCCTTCATCGCC | + |
|
Preference number: 4 (lower is better) Translates to: TVHHKCKPETLLNQQTPTVSWIC*LSSFIA Trigger: GGCGATGAAGGAGCTGAGCCAGCAAATCCAAGAAAC...TGTAGGGGTTTGTTGGTTTAGAAGGGTTTCAGGTTTGCATTTGTGATGAACTGT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000058825.5 |
||
| CDS-3UTR CCA 90 bp | TTTTCCACGAAGGATACTTTTTGGCTTGTAGATTATTCCCTGCGCCTCAATTCATTTCCCGCCGGCATTTaGTTTCTTGGATTTGCTGGC | + |
|
Preference number: 4 (lower is better) Translates to: FSTKDTFWLVDYSLRLNSFPAGI*FLGFAG Trigger: GCCAGCAAATCCAAGAAACCAAATGCCGGCGGGAAA...TGAATTGAGGCGCAGGGAATAATCTACAAGCCAAAAAGTATCCTTCGTGGAAAA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000058825.5 |
||
| CDS-3UTR GCA 90 bp | GATACTTTTTGGCTTGTAGATTATTCCCTGCGCCTCAATTCAGTTGCAGTAGCTTTGCTTTTGATTTGGTaGTCAGCATGGTCTTTGAAG | + |
|
Preference number: 4 (lower is better) Translates to: DTFWLVDYSLRLNSVAVALLLIW*SAWSLK Trigger: CTTCAAAGACCATGCTGAGCACCAAATCAAAAGCAA...AGCTACTGCAACTGAATTGAGGCGCAGGGAATAATCTACAAGCCAAAAAGTATC 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000058825.5 |
||
| CDS GCA 90 bp | TGCAGCCGCTGCCGCCCTCTGGTCAAGGCTTCTAGGTACCACTGCTaGTCCTTCGCCAGCTGCCGGTGCTTTTCCAGCTGGCTCCTCACA | + |
|
Preference number: 5 (lower is better) Translates to: CSRCRPLVKASRYHC*SFASCRCFSSWLLT Trigger: TGTGAGGAGCCAGCTGGAAAAGCACCGGCAGCTGGCGAAGGAGCAGCAGTGGTACCTAGAAGCCTTGACCAGAGGGCGGCAGCGGCTGCA 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000058825.5 |
||
| CDS GCA 90 bp | CCCCAGCTCCATCAGATGCCACTCTTGCAGCTCCTTCTCCATCAGTaGCTTTTCCCGCAGGAACTGGAAGTGCGCCTCCCGGTCCTTGGT | + |
|
Preference number: 5 (lower is better) Translates to: PQLHQMPLLQLLLHQ*LFPQELEVRLPVLG Trigger: ACCAAGGACCGGGAGGCGCACTTCCAGTTCCTGCGGGAAAAGGCACTGATGGAGAAGGAGCTGCAAGAGTGGCATCTGATGGAGCTGGGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000058825.5 |
||
| CDS CCA 90 bp | CACTCTTGCAGCTCCTTCTCCATCAGTGCCTTTTCCCGCAGGAACTaGAAGTGCGCCTCCCGGTCCTTGGTCGCAGTCTCACTTCGGACT | + |
|
Preference number: 5 (lower is better) Translates to: HSCSSFSISAFSRRN*KCASRSLVAVSLRT Trigger: AGTCCGAAGTGAGACTGCGACCAAGGACCGGGAGGCGCACTTCCAGTTCCTGCGGGAAAAGGCACTGATGGAGAAGGAGCTGCAAGAGTG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000058825.5 |
||
| CDS GCA 90 bp | TGCAGCTCCTTCTCCATCAGTGCCTTTTCCCGCAGGAACTGGAAGTaGGCCTCCCGGTCCTTGGTCGCAGTCTCACTTCGGACTTTCTCT | + |
|
Preference number: 5 (lower is better) Translates to: CSSFSISAFSRRNWK*ASRSLVAVSLRTFS Trigger: AGAGAAAGTCCGAAGTGAGACTGCGACCAAGGACCGGGAGGCGCACTTCCAGTTCCTGCGGGAAAAGGCACTGATGGAGAAGGAGCTGCA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000058825.5 |
||
| CDS-3UTR CAA 90 bp | GGGACACAGACAGTGAGGATGTGGGTCCCAGACAAGGAGCACGACCCCATGCTGCATCAGATGCCACTCTaGCAGCTCCTTCTCCATCAG | + |
|
Preference number: 5 (lower is better) Translates to: GTQTVRMWVPDKEHDPMLHQMPL*QLLLHQ Trigger: CTGATGGAGAAGGAGCTGCAAGAGTGGCATCTGATG...CAGCATGGGGTCGTGCTCCTTGTCTGGGACCCACATCCTCACTGTCTGTGTCCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000058825.5 |
||
| CDS CCA 90 bp | CTAGTAGCTGCCTGCTGTCCTTCAGCAGCCTTTCCCGCCGGCATTTaGTTTCTTGGATTTGCTGGCTCAGCTCCTTCATCGCCACCACTG | + |
|
Preference number: 5 (lower is better) Translates to: LVAACCPSAAFPAGI*FLGFAGSAPSSPPL Trigger: CAGTGGTGGCGATGAAGGAGCTGAGCCAGCAAATCCAAGAAACCAAATGCCGGCGGGAAAGGCTGCTGAAGGACAGCAGGCAGCTACTAG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000058825.5 |
||
| CDS GCA 90 bp | TGCGCCTCCCGGTCCTTGGTCGCAGTCTCACTTCGGACTTTCTCTTaGTCCTTCTCCAAGGTCTGTATTTTCACGTCCTGGCCCTCCTTT | + |
|
Preference number: 5 (lower is better) Translates to: CASRSLVAVSLRTFS*SFSKVCIFTSWPSF Trigger: AAAGGAGGGCCAGGACGTGAAAATACAGACCTTGGAGAAGGAGCAAGAGAAAGTCCGAAGTGAGACTGCGACCAAGGACCGGGAGGCGCA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000058825.5 |
||
| CDS GCA 90 bp | GCTTCAGTGCCTGCAACTGCTGCTTCAAATCCTTCTGGGTCTTTCTaGCCTGCAGGAGCTGGGCTTGAAGAGCTGCGTTTCTCTGGTTGT | + |
|
Preference number: 5 (lower is better) Translates to: ASVPATAASNPSGSF*PAGAGLEELRFSGC Trigger: ACAACCAGAGAAACGCAGCTCTTCAAGCCCAGCTCCTGCAGGGCAGAAAGACCCAGAAGGATTTGAAGCAGCAGTTGCAGGCACTGAAGC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000058825.5 |
||
| CDS GCA 90 bp | CTGTCCTTCAGCAGCCTTTCCCGCCGGCATTTGGTTTCTTGGATTTaGTGGCTCAGCTCCTTCATCGCCACCACTGTCTTCCTTTTTACC | + |
|
Preference number: 5 (lower is better) Translates to: LSFSSLSRRHLVSWI*WLSSFIATTVFLFT Trigger: GGTAAAAAGGAAGACAGTGGTGGCGATGAAGGAGCTGAGCCAGCAAATCCAAGAAACCAAATGCCGGCGGGAAAGGCTGCTGAAGGACAG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000058825.5 |
||
| CDS GCA 90 bp | ATCCTTCTGGGTCTTTCTGCCCTGCAGGAGCTGGGCTTGAAGAGCTaGGTTTCTCTGGTTGTATCTGGATGCCAATTCTTGTCTCTCGCG | + |
|
Preference number: 5 (lower is better) Translates to: ILLGLSALQELGLKS*VSLVVSGCQFLSLA Trigger: CGCGAGAGACAAGAATTGGCATCCAGATACAACCAGAGAAACGCAGCTCTTCAAGCCCAGCTCCTGCAGGGCAGAAAGACCCAGAAGGAT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000058825.5 |
||
| CDS-3UTR CAA 90 bp | TCCGGAATCTACAACAGCCCCAGGGACACAGACAGTGAGGATGTGGGTCCCAGAGCTGCGTTTCTCTGGTaGTATCTGGATGCCAATTCT | + |
|
Preference number: 5 (lower is better) Translates to: SGIYNSPRDTDSEDVGPRAAFLW*YLDANS Trigger: AGAATTGGCATCCAGATACAACCAGAGAAACGCAGC...TCTGGGACCCACATCCTCACTGTCTGTGTCCCTGGGGCTGTTGTAGATTCCGGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000058825.5 |
||
| CDS-3UTR CAA 90 bp | CATGCTGCAACAACTGCCCTTCCTGAAAGTGTGTTTCTATTTTCCACGAAGGATGTAAGCCCCGTGGTGTaGATCTGCCCCAGCTCCATC | + |
|
Preference number: 5 (lower is better) Translates to: HAATTALPESVFLFSTKDVSPVV*ICPSSI Trigger: GATGGAGCTGGGGCAGATCAACACCACGGGGCTTAC...ATCCTTCGTGGAAAATAGAAACACACTTTCAGGAAGGGCAGTTGTTGCAGCATG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000058825.5 |
||
| CDS TCA 90 bp | TGCTTCAAATCCTTCTGGGTCTTTCTGCCCTGCAGGAGCTGGGCTTaGAGAGCTGCGTTTCTCTGGTTGTATCTGGATGCCAATTCTTGT | + |
|
Preference number: 5 (lower is better) Translates to: CFKSFWVFLPCRSWA*RAAFLWLYLDANSC Trigger: ACAAGAATTGGCATCCAGATACAACCAGAGAAACGCAGCTCTTCAAGCCCAGCTCCTGCAGGGCAGAAAGACCCAGAAGGATTTGAAGCA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000058825.5 |
||
| CDS CCA 90 bp | CTGGATGCCAATTCTTGTCTCTCGCGTTCTATCTCGCCACATTCTTaGACGTACTGCTTCCACAGCTCCTCCTGTTTCTTCTCACACTGT | + |
|
Preference number: 5 (lower is better) Translates to: LDANSCLSRSISPHS*TYCFHSSSCFFSHC Trigger: ACAGTGTGAGAAGAAACAGGAGGAGCTGTGGAAGCAGTACGTCCAAGAATGTGGCGAGATAGAACGCGAGAGACAAGAATTGGCATCCAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000058825.5 |
||
| CDS GCA 90 bp | TATTTTCACGTCCTGGCCCTCCTTTATCTTGTAAACTGGCTTCAGTaGCTGCAACTGCTGCTTCAAATCCTTCTGGGTCTTTCTGCCCTG | + |
|
Preference number: 5 (lower is better) Translates to: YFHVLALLYLVNWLQ*LQLLLQILLGLSAL Trigger: CAGGGCAGAAAGACCCAGAAGGATTTGAAGCAGCAGTTGCAGGCACTGAAGCCAGTTTACAAGATAAAGGAGGGCCAGGACGTGAAAATA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000058825.5 |
||
| CDS CCA 90 bp | CAAGGTCTGTATTTTCACGTCCTGGCCCTCCTTTATCTTGTAAACTaGCTTCAGTGCCTGCAACTGCTGCTTCAAATCCTTCTGGGTCTT | + |
|
Preference number: 5 (lower is better) Translates to: QGLYFHVLALLYLVN*LQCLQLLLQILLGL Trigger: AAGACCCAGAAGGATTTGAAGCAGCAGTTGCAGGCACTGAAGCCAGTTTACAAGATAAAGGAGGGCCAGGACGTGAAAATACAGACCTTG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000058825.5 |
||
| CDS-3UTR CAA 90 bp | CATGCTGCAACAACTGCCCTTCCTGAAAGTGTGTTTCTATTTTCCACGAAGGATTATCTCGCCACATTCTaGGACGTACTGCTTCCACAG | + |
|
Preference number: 5 (lower is better) Translates to: HAATTALPESVFLFSTKDYLATF*DVLLPQ Trigger: CTGTGGAAGCAGTACGTCCAAGAATGTGGCGAGATA...ATCCTTCGTGGAAAATAGAAACACACTTTCAGGAAGGGCAGTTGTTGCAGCATG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000058825.5 |
||
| CDS-3UTR CAA 90 bp | TTTTCCACGAAGGATACTTTTTGGCTTGTAGATTATTCCCTGCGCCTCAATTCAACTTCGGACTTTCTCTaGCTCCTTCTCCAAGGTCTG | + |
|
Preference number: 5 (lower is better) Translates to: FSTKDTFWLVDYSLRLNSTSDFL*LLLQGL Trigger: CAGACCTTGGAGAAGGAGCAAGAGAAAGTCCGAAGT...TGAATTGAGGCGCAGGGAATAATCTACAAGCCAAAAAGTATCCTTCGTGGAAAA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000058825.5 |
||
| CDS-3UTR CAA 90 bp | GTTTCTATTTTCCACGAAGGATACTTTTTGGCTTGTAGATTATTCCCTGCGCCTTTTGGTTTCTTGGATTaGCTGGCTCAGCTCCTTCAT | + |
|
Preference number: 5 (lower is better) Translates to: VSIFHEGYFLACRLFPAPFGFLD*LAQLLH Trigger: ATGAAGGAGCTGAGCCAGCAAATCCAAGAAACCAAA...AGGCGCAGGGAATAATCTACAAGCCAAAAAGTATCCTTCGTGGAAAATAGAAAC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000058825.5 |
||
| CDS CCA 72 bp | GGCGCTCGCGTTCTGCCTGCAGCCGCTGCCGCCCTCTaGTCAAGGCTTCTAGGTACCACTGCTGCTCCTTCG | + |
|
Preference number: 6 (lower is better) Translates to: GARVLPAAAAAL*SRLLGTTAAPS Trigger: CGAAGGAGCAGCAGTGGTACCTAGAAGCCTTGACCAGAGGGCGGCAGCGGCTGCAGGCAGAACGCGAGCGCC 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000058825.5 |
||
| CDS GCA 72 bp | TGCCGCCCTCTGGTCAAGGCTTCTAGGTACCACTGCTaGTCCTTCGCCAGCTGCCGGTGCTTTTCCAGCTGG | + |
|
Preference number: 6 (lower is better) Translates to: CRPLVKASRYHC*SFASCRCFSSW Trigger: CCAGCTGGAAAAGCACCGGCAGCTGGCGAAGGAGCAGCAGTGGTACCTAGAAGCCTTGACCAGAGGGCGGCA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000058825.5 |
||
| CDS GCA 72 bp | TTCTCCATCAGTGCCTTTTCCCGCAGGAACTGGAAGTaGGCCTCCCGGTCCTTGGTCGCAGTCTCACTTCGG | + |
|
Preference number: 6 (lower is better) Translates to: FSISAFSRRNWK*ASRSLVAVSLR Trigger: CCGAAGTGAGACTGCGACCAAGGACCGGGAGGCGCACTTCCAGTTCCTGCGGGAAAAGGCACTGATGGAGAA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000058825.5 |
||
| CDS CCA 72 bp | AGCTCCTTCTCCATCAGTGCCTTTTCCCGCAGGAACTaGAAGTGCGCCTCCCGGTCCTTGGTCGCAGTCTCA | + |
|
Preference number: 6 (lower is better) Translates to: SSFSISAFSRRN*KCASRSLVAVS Trigger: TGAGACTGCGACCAAGGACCGGGAGGCGCACTTCCAGTTCCTGCGGGAAAAGGCACTGATGGAGAAGGAGCT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000058825.5 |
||
| CDS CAA 90 bp | GCTGCTAGCGCCAAGGCCTTGTACTTCCTCGTAAGCCCCGTGGTGTaGATCTGCCCCAGCTCCATCAGATGCCACTCTTGCAGCTCCTTC | + |
|
Preference number: 6 (lower is better) Translates to: AASAKALYFLVSPVV*ICPSSIRCHSCSSF Trigger: GAAGGAGCTGCAAGAGTGGCATCTGATGGAGCTGGGGCAGATCAACACCACGGGGCTTACGAGGAAGTACAAGGCCTTGGCGCTAGCAGC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000058825.5 |
||
| CDS TCA 72 bp | ACAGCATCCAACCTGCCGTACTCCTGGCTCAGTTGCTaGAGCTCCTTGCGTAGCTGCTGGTTCTCCCTGTGG | + |
|
Preference number: 6 (lower is better) Translates to: TASNLPYSWLSC*SSLRSCWFSLW Trigger: CCACAGGGAGAACCAGCAGCTACGCAAGGAGCTTCAGCAACTGAGCCAGGAGTACGGCAGGTTGGATGCTGT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000058825.5 |
||
| CDS GCA 72 bp | CATCAGATGCCACTCTTGCAGCTCCTTCTCCATCAGTaGCTTTTCCCGCAGGAACTGGAAGTGCGCCTCCCG | + |
|
Preference number: 6 (lower is better) Translates to: HQMPLLQLLLHQ*LFPQELEVRLP Trigger: CGGGAGGCGCACTTCCAGTTCCTGCGGGAAAAGGCACTGATGGAGAAGGAGCTGCAAGAGTGGCATCTGATG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000058825.5 |
||
| CDS CAA 72 bp | GCCAAGGCCTTGTACTTCCTCGTAAGCCCCGTGGTGTaGATCTGCCCCAGCTCCATCAGATGCCACTCTTGC | + |
|
Preference number: 6 (lower is better) Translates to: AKALYFLVSPVV*ICPSSIRCHSC Trigger: GCAAGAGTGGCATCTGATGGAGCTGGGGCAGATCAACACCACGGGGCTTACGAGGAAGTACAAGGCCTTGGC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000058825.5 |
||
| CDS GCA 72 bp | CAGCCTGCACACGGTATTTTTCCTCTAGTAGCTGCCTaGTGTCCTTCAGCAGCCTTTCCCGCCGGCATTTGG | + |
|
Preference number: 6 (lower is better) Translates to: QPAHGIFPLVAA*CPSAAFPAGIW Trigger: CCAAATGCCGGCGGGAAAGGCTGCTGAAGGACAGCAGGCAGCTACTAGAGGAAAAATACCGTGTGCAGGCTG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000058825.5 |
||
| CDS GCA 72 bp | GTGTTGATCTGCCCCAGCTCCATCAGATGCCACTCTTaGAGCTCCTTCTCCATCAGTGCCTTTTCCCGCAGG | + |
|
Preference number: 6 (lower is better) Translates to: VLICPSSIRCHS*SSFSISAFSRR Trigger: CCTGCGGGAAAAGGCACTGATGGAGAAGGAGCTGCAAGAGTGGCATCTGATGGAGCTGGGGCAGATCAACAC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000058825.5 |
||
| CDS GCA 72 bp | AGCCCCGTGGTGTTGATCTGCCCCAGCTCCATCAGATaGCACTCTTGCAGCTCCTTCTCCATCAGTGCCTTT | + |
|
Preference number: 6 (lower is better) Translates to: SPVVLICPSSIR*HSCSSFSISAF Trigger: AAAGGCACTGATGGAGAAGGAGCTGCAAGAGTGGCATCTGATGGAGCTGGGGCAGATCAACACCACGGGGCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000058825.5 |
||
| CDS CAA 72 bp | GGTGTTGATCTGCCCCAGCTCCATCAGATGCCACTCTaGCAGCTCCTTCTCCATCAGTGCCTTTTCCCGCAG | + |
|
Preference number: 6 (lower is better) Translates to: GVDLPQLHQMPL*QLLLHQCLFPQ Trigger: CTGCGGGAAAAGGCACTGATGGAGAAGGAGCTGCAAGAGTGGCATCTGATGGAGCTGGGGCAGATCAACACC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000058825.5 |
||
| CDS TCA 72 bp | TCCTTCTGGGTCTTTCTGCCCTGCAGGAGCTGGGCTTaGAGAGCTGCGTTTCTCTGGTTGTATCTGGATGCC | + |
|
Preference number: 6 (lower is better) Translates to: SFWVFLPCRSWA*RAAFLWLYLDA Trigger: GGCATCCAGATACAACCAGAGAAACGCAGCTCTTCAAGCCCAGCTCCTGCAGGGCAGAAAGACCCAGAAGGA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000058825.5 |
||
| CDS TCA 72 bp | TGGTGCTCAGCATGGTCTTTGAAGCTCTCTGTTCCTTaGGGCGTGGGTTATGACCACGATGATGGCGCTCGC | + |
|
Preference number: 6 (lower is better) Translates to: WCSAWSLKLSVP*GVGYDHDDGAR Trigger: GCGAGCGCCATCATCGTGGTCATAACCCACGCCTCAAGGAACAGAGAGCTTCAAAGACCATGCTGAGCACCA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000058825.5 |
||
| CDS GCA 72 bp | AGCAGCCTTTCCCGCCGGCATTTGGTTTCTTGGATTTaGTGGCTCAGCTCCTTCATCGCCACCACTGTCTTC | + |
|
Preference number: 6 (lower is better) Translates to: SSLSRRHLVSWI*WLSSFIATTVF Trigger: GAAGACAGTGGTGGCGATGAAGGAGCTGAGCCAGCAAATCCAAGAAACCAAATGCCGGCGGGAAAGGCTGCT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000058825.5 |
||
| CDS GCA 72 bp | CCTGCAACTGCTGCTTCAAATCCTTCTGGGTCTTTCTaGCCTGCAGGAGCTGGGCTTGAAGAGCTGCGTTTC | + |
|
Preference number: 6 (lower is better) Translates to: PATAASNPSGSF*PAGAGLEELRF Trigger: GAAACGCAGCTCTTCAAGCCCAGCTCCTGCAGGGCAGAAAGACCCAGAAGGATTTGAAGCAGCAGTTGCAGG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000058825.5 |
||
| CDS CAA 72 bp | CAGCAGCCTTTCCCGCCGGCATTTGGTTTCTTGGATTaGCTGGCTCAGCTCCTTCATCGCCACCACTGTCTT | + |
|
Preference number: 6 (lower is better) Translates to: QQPFPPAFGFLD*LAQLLHRHHCL Trigger: AAGACAGTGGTGGCGATGAAGGAGCTGAGCCAGCAAATCCAAGAAACCAAATGCCGGCGGGAAAGGCTGCTG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000058825.5 |
||
| CDS GCA 72 bp | TTTTCAGCCTGCACACGGTATTTTTCCTCTAGTAGCTaGCTGCTGTCCTTCAGCAGCCTTTCCCGCCGGCAT | + |
|
Preference number: 6 (lower is better) Translates to: FSACTRYFSSSS*LLSFSSLSRRH Trigger: ATGCCGGCGGGAAAGGCTGCTGAAGGACAGCAGGCAGCTACTAGAGGAAAAATACCGTGTGCAGGCTGAAAA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000058825.5 |
||
| CDS CCA 72 bp | AGCCTTTCCCGCCGGCATTTGGTTTCTTGGATTTGCTaGCTCAGCTCCTTCATCGCCACCACTGTCTTCCTT | + |
|
Preference number: 6 (lower is better) Translates to: SLSRRHLVSWIC*LSSFIATTVFL Trigger: AAGGAAGACAGTGGTGGCGATGAAGGAGCTGAGCCAGCAAATCCAAGAAACCAAATGCCGGCGGGAAAGGCT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000058825.5 |
||
| CDS CAA 72 bp | ATCCTTCTGGGTCTTTCTGCCCTGCAGGAGCTGGGCTaGAAGAGCTGCGTTTCTCTGGTTGTATCTGGATGC | + |
|
Preference number: 6 (lower is better) Translates to: ILLGLSALQELG*KSCVSLVVSGC Trigger: GCATCCAGATACAACCAGAGAAACGCAGCTCTTCAAGCCCAGCTCCTGCAGGGCAGAAAGACCCAGAAGGAT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000058825.5 |
||
| CDS GCA 72 bp | GGTCTTTCTGCCCTGCAGGAGCTGGGCTTGAAGAGCTaGGTTTCTCTGGTTGTATCTGGATGCCAATTCTTG | + |
|
Preference number: 6 (lower is better) Translates to: GLSALQELGLKS*VSLVVSGCQFL Trigger: CAAGAATTGGCATCCAGATACAACCAGAGAAACGCAGCTCTTCAAGCCCAGCTCCTGCAGGGCAGAAAGACC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000058825.5 |
||
| CDS GCA 72 bp | CGGTCCTTGGTCGCAGTCTCACTTCGGACTTTCTCTTaGTCCTTCTCCAAGGTCTGTATTTTCACGTCCTGG | + |
|
Preference number: 6 (lower is better) Translates to: RSLVAVSLRTFS*SFSKVCIFTSW Trigger: CCAGGACGTGAAAATACAGACCTTGGAGAAGGAGCAAGAGAAAGTCCGAAGTGAGACTGCGACCAAGGACCG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000058825.5 |
||
| CDS CAA 72 bp | CCGGTCCTTGGTCGCAGTCTCACTTCGGACTTTCTCTaGCTCCTTCTCCAAGGTCTGTATTTTCACGTCCTG | + |
|
Preference number: 6 (lower is better) Translates to: PVLGRSLTSDFL*LLLQGLYFHVL Trigger: CAGGACGTGAAAATACAGACCTTGGAGAAGGAGCAAGAGAAAGTCCGAAGTGAGACTGCGACCAAGGACCGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000058825.5 |
||
| CDS CAA 90 bp | CTGCTTCAAATCCTTCTGGGTCTTTCTGCCCTGCAGGAGCTGGGCTaGAAGAGCTGCGTTTCTCTGGTTGTATCTGGATGCCAATTCTTG | + |
|
Preference number: 6 (lower is better) Translates to: LLQILLGLSALQELG*KSCVSLVVSGCQFL Trigger: CAAGAATTGGCATCCAGATACAACCAGAGAAACGCAGCTCTTCAAGCCCAGCTCCTGCAGGGCAGAAAGACCCAGAAGGATTTGAAGCAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000058825.5 |
||
| CDS CAA 90 bp | TCTGGATGCCAATTCTTGTCTCTCGCGTTCTATCTCGCCACATTCTaGGACGTACTGCTTCCACAGCTCCTCCTGTTTCTTCTCACACTG | + |
|
Preference number: 6 (lower is better) Translates to: SGCQFLSLAFYLATF*DVLLPQLLLFLLTL Trigger: CAGTGTGAGAAGAAACAGGAGGAGCTGTGGAAGCAGTACGTCCAAGAATGTGGCGAGATAGAACGCGAGAGACAAGAATTGGCATCCAGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000058825.5 |
||
| CDS GCA 72 bp | GTCCTGGCCCTCCTTTATCTTGTAAACTGGCTTCAGTaGCTGCAACTGCTGCTTCAAATCCTTCTGGGTCTT | + |
|
Preference number: 6 (lower is better) Translates to: VLALLYLVNWLQ*LQLLLQILLGL Trigger: AAGACCCAGAAGGATTTGAAGCAGCAGTTGCAGGCACTGAAGCCAGTTTACAAGATAAAGGAGGGCCAGGAC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000058825.5 |
||
| CDS CCA 72 bp | AATTCTTGTCTCTCGCGTTCTATCTCGCCACATTCTTaGACGTACTGCTTCCACAGCTCCTCCTGTTTCTTC | + |
|
Preference number: 6 (lower is better) Translates to: NSCLSRSISPHS*TYCFHSSSCFF Trigger: GAAGAAACAGGAGGAGCTGTGGAAGCAGTACGTCCAAGAATGTGGCGAGATAGAACGCGAGAGACAAGAATT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000058825.5 |
||
| CDS CAA 72 bp | CAATTCTTGTCTCTCGCGTTCTATCTCGCCACATTCTaGGACGTACTGCTTCCACAGCTCCTCCTGTTTCTT | + |
|
Preference number: 6 (lower is better) Translates to: QFLSLAFYLATF*DVLLPQLLLFL Trigger: AAGAAACAGGAGGAGCTGTGGAAGCAGTACGTCCAAGAATGTGGCGAGATAGAACGCGAGAGACAAGAATTG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000058825.5 |
||
| CDS CAA 90 bp | GTCTTCCTTTTTACCCGTTTCTCCAAGCTCGTTAGCAACTTTGGCTaGAGATATGTATTTAGAATAGTAAGGTGTGGTGTTGGCGGGGGT | + |
|
Preference number: 6 (lower is better) Translates to: VFLFTRFSKLVSNFG*RYVFRIVRCGVGGG Trigger: ACCCCCGCCAACACCACACCTTACTATTCTAAATACATATCTCAAGCCAAAGTTGCTAACGAGCTTGGAGAAACGGGTAAAAAGGAAGAC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000058825.5 |
||