Pregenerated sensors for CCDC120 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000031150Ensembl transcript IDs: ENSMUST00000033490.13, ENSMUST00000224502.2
Found 187 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | ACCACATCTCAGGGCTCAGCGAGGTTGACTGTGTGCTCCTCAGACTaGAGTTTGTCCAGACCGACACAGGGCTTAGGGTCAGACCAGTGT | + |
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Preference number: 1 (lower is better) Translates to: TTSQGSARLTVCSSD*SLSRPTQGLGSDQC Trigger: ACACTGGTCTGACCCTAAGCCCTGTGTCGGTCTGGACAAACTCCAGTCTGAGGAGCACACAGTCAACCTCGCTGAGCCCTGAGATGTGGT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033490.13 |
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| 3UTR CCA 90 bp | AGGGAATTCTGTTCCCAGCAGTCTCCCAGCCCCAGAGACTCTTTATaGTCCATTTTGTTGAGGCAGGGTGGTGGTGGCTCTGGAATGGAA | + |
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Preference number: 1 (lower is better) Translates to: REFCSQQSPSPRDSL*SILLRQGGGGSGME Trigger: TTCCATTCCAGAGCCACCACCACCCTGCCTCAACAAAATGGACCATAAAGAGTCTCTGGGGCTGGGAGACTGCTGGGAACAGAATTCCCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000033490.13 |
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| 3UTR CCA 90 bp | TGTTTAAAAAGTGGTAAAAGAAGGAATGCCAAGGAGGACATGATGTaGCCTGCAACCCATGGCCAGATGTCACCTGAGGGTTTGACTGGC | + |
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Preference number: 1 (lower is better) Translates to: CLKSGKRRNAKEDMM*PATHGQMSPEGLTG Trigger: GCCAGTCAAACCCTCAGGTGACATCTGGCCATGGGTTGCAGGCCACATCATGTCCTCCTTGGCATTCCTTCTTTTACCACTTTTTAAACA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000033490.13 |
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| 3UTR TCA 90 bp | ACTGCAGCATCACAGGATGCAACATACTCAAATGGCTCTGTTTCTTaGCAACCTCTTGTACGGCCTTCTGATTGGGCAGAGACAGAGACA | + |
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Preference number: 1 (lower is better) Translates to: TAASQDATYSNGSVS*QPLVRPSDWAETET Trigger: TGTCTCTGTCTCTGCCCAATCAGAAGGCCGTACAAGAGGTTGTCAAGAAACAGAGCCATTTGAGTATGTTGCATCCTGTGATGCTGCAGT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033490.13 |
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| 3UTR CAA 90 bp | TCTCAGGGCTCAGCGAGGTTGACTGTGTGCTCCTCAGACTGGAGTTaGTCCAGACCGACACAGGGCTTAGGGTCAGACCAGTGTCCCTGG | + |
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Preference number: 2 (lower is better) Translates to: SQGSARLTVCSSDWS*SRPTQGLGSDQCPW Trigger: CCAGGGACACTGGTCTGACCCTAAGCCCTGTGTCGGTCTGGACAAACTCCAGTCTGAGGAGCACACAGTCAACCTCGCTGAGCCCTGAGA 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033490.13 |
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| 3UTR CAA 90 bp | TCCCAGCAGTCTCCCAGCCCCAGAGACTCTTTATGGTCCATTTTGTaGAGGCAGGGTGGTGGTGGCTCTGGAATGGAACAGGTTGGTCAT | + |
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Preference number: 2 (lower is better) Translates to: SQQSPSPRDSLWSIL*RQGGGGSGMEQVGH Trigger: ATGACCAACCTGTTCCATTCCAGAGCCACCACCACCCTGCCTCAACAAAATGGACCATAAAGAGTCTCTGGGGCTGGGAGACTGCTGGGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000033490.13 |
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| 3UTR-3UTR TCA 90 bp | GTGTCTGGGTGTCAGAACTGGAAGACGGCTCCCCCTCTAGCGTCAGGTCACTTAGTAGGGAAGACAAGGTaGGAGAGGAAAAGACGGAGA | + |
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Preference number: 2 (lower is better) Translates to: VSGCQNWKTAPPLASGHLVGKTR*ERKRRR Trigger: TCTCCGTCTTTTCCTCTCTCACCTTGTCTTCCCTAC...TAAGTGACCTGACGCTAGAGGGGGAGCCGTCTTCCAGTTCTGACACCCAGACAC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000033490.13 |
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| 3UTR-3UTR GCA 90 bp | CTTCTGATTGGGCAGAGACAGAGACAGAGCTCCTTCAGGTACCCCCACTTAGACTGGACAGAAGCCCGCTaGCCATCTGCTCAAAGACTC | + |
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Preference number: 2 (lower is better) Translates to: LLIGQRQRQSSFRYPHLDWTEAR*PSAQRL Trigger: GAGTCTTTGAGCAGATGGGCAGCGGGCTTCTGTCCA...GTCTAAGTGGGGGTACCTGAAGGAGCTCTGTCTCTGTCTCTGCCCAATCAGAAG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000033490.13 |
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| 3UTR-3UTR TCA 90 bp | ACAGAGCTCCTTCAGGTACCCCCACTTAGACTTCCATCCTTCCAAATGTGGACAAGGGCTCAGCGAGGTTaGCTGTGTGCTCCTCAGACT | + |
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Preference number: 2 (lower is better) Translates to: TELLQVPPLRLPSFQMWTRAQRG*LCAPQT Trigger: AGTCTGAGGAGCACACAGTCAACCTCGCTGAGCCCT...TGTCCACATTTGGAAGGATGGAAGTCTAAGTGGGGGTACCTGAAGGAGCTCTGT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000033490.13 |
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| 3UTR-3UTR CCA 90 bp | ACAGAGCTCCTTCAGGTACCCCCACTTAGACTTCCATCCTTCCAAATGTGGACAGTCTTTGAAGCTAGCTaGGGCCCTCCAGTTCCCCCA | + |
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Preference number: 2 (lower is better) Translates to: TELLQVPPLRLPSFQMWTVFEAS*GPPVPP Trigger: TGGGGGAACTGGAGGGCCCCAGCTAGCTTCAAAGAC...TGTCCACATTTGGAAGGATGGAAGTCTAAGTGGGGGTACCTGAAGGAGCTCTGT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000033490.13 |
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| 3UTR-3UTR CCA 90 bp | GCCCATCTGCTCAAAGACTCTAGCGGGAGGAAGCAGGGAATTCTGTTCCCAGCAAAGCTGTTAAAGAGGTaGAGACAGGTACAGGACAGC | + |
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Preference number: 2 (lower is better) Translates to: AHLLKDSSGRKQGILFPAKLLKR*RQVQDS Trigger: GCTGTCCTGTACCTGTCTCCACCTCTTTAACAGCTT...TGCTGGGAACAGAATTCCCTGCTTCCTCCCGCTAGAGTCTTTGAGCAGATGGGC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033490.13 |
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| 3UTR-3UTR CCA 90 bp | ACAGAGCTCCTTCAGGTACCCCCACTTAGACTTCCATCCTTCCAAATGTGGACAGTTGAGGCAGGGTGGTaGTGGCTCTGGAATGGAACA | + |
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Preference number: 2 (lower is better) Translates to: TELLQVPPLRLPSFQMWTVEAGW*WLWNGT Trigger: TGTTCCATTCCAGAGCCACCACCACCCTGCCTCAAC...TGTCCACATTTGGAAGGATGGAAGTCTAAGTGGGGGTACCTGAAGGAGCTCTGT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000033490.13 |
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| 3UTR-3UTR CCA 90 bp | CACCACATCTCAGGGCTCAGCGAGGTTGACTGTGTGCTCCTCAGACTGGAGTTTACCCCTTCTAAAGCTTaGGAAAGAACTGCTACCAAC | + |
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Preference number: 2 (lower is better) Translates to: HHISGLSEVDCVLLRLEFTPSKA*ERTATN Trigger: GTTGGTAGCAGTTCTTTCCCAAGCTTTAGAAGGGGT...AAACTCCAGTCTGAGGAGCACACAGTCAACCTCGCTGAGCCCTGAGATGTGGTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033490.13 |
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| 3UTR CAA 90 bp | ACAGGTACAGGACAGCACCTTCAGGTTCTCAAGCATGGGGTAAGCTaGGAAGAGAAAGCCAGGGATAGCACAAGTCCCTTTCTCCCATTA | + |
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Preference number: 2 (lower is better) Translates to: TGTGQHLQVLKHGVS*EEKARDSTSPFLPL Trigger: TAATGGGAGAAAGGGACTTGTGCTATCCCTGGCTTTCTCTTCCAAGCTTACCCCATGCTTGAGAACCTGAAGGTGCTGTCCTGTACCTGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033490.13 |
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| 3UTR CAA 90 bp | CACAGGATGCAACATACTCAAATGGCTCTGTTTCTTGACAACCTCTaGTACGGCCTTCTGATTGGGCAGAGACAGAGACAGAGCTCCTTC | + |
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Preference number: 2 (lower is better) Translates to: HRMQHTQMALFLDNL*YGLLIGQRQRQSSF Trigger: GAAGGAGCTCTGTCTCTGTCTCTGCCCAATCAGAAGGCCGTACAAGAGGTTGTCAAGAAACAGAGCCATTTGAGTATGTTGCATCCTGTG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033490.13 |
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| 3UTR-3UTR TCA 90 bp | CAGCATCACAGGATGCAACATACTCAAATGGCTCTGTTTCTTGACAACCTCTTGTCATGGGGACAGGAATaGACCCAACCAGGAACGAGC | + |
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Preference number: 2 (lower is better) Translates to: QHHRMQHTQMALFLDNLLSWGQE*TQPGTS Trigger: GCTCGTTCCTGGTTGGGTTCATTCCTGTCCCCATGA...CAAGAGGTTGTCAAGAAACAGAGCCATTTGAGTATGTTGCATCCTGTGATGCTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033490.13 |
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| 3UTR-3UTR CCA 90 bp | CAGCATCACAGGATGCAACATACTCAAATGGCTCTGTTTCTTGACAACCTCTTGAGTGTCCCTGGTGTCTaGGTGTCAGAACTGGAAGAC | + |
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Preference number: 2 (lower is better) Translates to: QHHRMQHTQMALFLDNLLSVPGV*VSELED Trigger: GTCTTCCAGTTCTGACACCCAGACACCAGGGACACT...CAAGAGGTTGTCAAGAAACAGAGCCATTTGAGTATGTTGCATCCTGTGATGCTG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033490.13 |
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| 3UTR-3UTR CCA 90 bp | GCTCACAGTTTCCCTTTTATAAAACACCTAGTGTTGGGCAATGACAGAGTACTATCTGGGTGTCAGAACTaGAAGACGGCTCCCCCTCTA | + |
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Preference number: 2 (lower is better) Translates to: AHSFPFIKHLVLGNDRVLSGCQN*KTAPPL Trigger: TAGAGGGGGAGCCGTCTTCCAGTTCTGACACCCAGA...TAGTACTCTGTCATTGCCCAACACTAGGTGTTTTATAAAAGGGAAACTGTGAGC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000033490.13 |
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| 3UTR CAA 90 bp | AACCAGGAACGAGCTCACAGTTTCCCTTTTATAAAACACCTAGTGTaGGGCAATGACAGAGTACTAAATCACAACTGTAAACAGAAATGG | + |
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Preference number: 2 (lower is better) Translates to: NQERAHSFPFIKHLV*GNDRVLNHNCKQKW Trigger: CCATTTCTGTTTACAGTTGTGATTTAGTACTCTGTCATTGCCCAACACTAGGTGTTTTATAAAAGGGAAACTGTGAGCTCGTTCCTGGTT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000033490.13 |
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| 3UTR CCA 72 bp | CAGGGCTCAGCGAGGTTGACTGTGTGCTCCTCAGACTaGAGTTTGTCCAGACCGACACAGGGCTTAGGGTCA | + |
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Preference number: 3 (lower is better) Translates to: QGSARLTVCSSD*SLSRPTQGLGS Trigger: TGACCCTAAGCCCTGTGTCGGTCTGGACAAACTCCAGTCTGAGGAGCACACAGTCAACCTCGCTGAGCCCTG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033490.13 |
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| 3UTR CCA 72 bp | AGAAATGGAGGGAGGGGTAGAGTCTTTGAAGCTAGCTaGGGCCCTCCAGTTCCCCCAGCACAGGATGAGAAG | + |
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Preference number: 3 (lower is better) Translates to: RNGGRGRVFEAS*GPPVPPAQDEK Trigger: CTTCTCATCCTGTGCTGGGGGAACTGGAGGGCCCCAGCTAGCTTCAAAGACTCTACCCCTCCCTCCATTTCT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000033490.13 |
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| 3UTR CCA 72 bp | TGTTCCCAGCAGTCTCCCAGCCCCAGAGACTCTTTATaGTCCATTTTGTTGAGGCAGGGTGGTGGTGGCTCT | + |
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Preference number: 3 (lower is better) Translates to: CSQQSPSPRDSL*SILLRQGGGGS Trigger: AGAGCCACCACCACCCTGCCTCAACAAAATGGACCATAAAGAGTCTCTGGGGCTGGGAGACTGCTGGGAACA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000033490.13 |
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| 3UTR TCA 72 bp | CATGATGTGGCCTGCAACCCATGGCCAGATGTCACCTaGGGGTTTGACTGGCATGTACTAGCTGCCAGGTTT | + |
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Preference number: 3 (lower is better) Translates to: HDVACNPWPDVT*GFDWHVLAARF Trigger: AAACCTGGCAGCTAGTACATGCCAGTCAAACCCTCAGGTGACATCTGGCCATGGGTTGCAGGCCACATCATG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033490.13 |
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| 3UTR GCA 72 bp | ATCCTTCCAAATGTGGACAGAAGCCCGCTGCCCATCTaGTCAAAGACTCTAGCGGGAGGAAGCAGGGAATTC | + |
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Preference number: 3 (lower is better) Translates to: ILPNVDRSPLPI*SKTLAGGSREF Trigger: GAATTCCCTGCTTCCTCCCGCTAGAGTCTTTGAGCAGATGGGCAGCGGGCTTCTGTCCACATTTGGAAGGAT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033490.13 |
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| 3UTR TCA 72 bp | ATATCTTCCTGGGCCAAAAAGAAGCCAGGGGTCCTGTaGGATCAGGCAAGTGTCCCTCAGGACAAAGAGCCA | + |
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Preference number: 3 (lower is better) Translates to: ISSWAKKKPGVL*DQASVPQDKEP Trigger: TGGCTCTTTGTCCTGAGGGACACTTGCCTGATCTCACAGGACCCCTGGCTTCTTTTTGGCCCAGGAAGATAT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000033490.13 ENSMUST00000224502.2 |
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| 3UTR GCA 72 bp | GTCCCTTTCTCCCATTACCCGGACTTCAAGGCTCACTaGCAGCTGCCATACACTAGGGAGAATAGAAAACCC | + |
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Preference number: 3 (lower is better) Translates to: VPFSHYPDFKAH*QLPYTRENRKP Trigger: GGGTTTTCTATTCTCCCTAGTGTATGGCAGCTGGCAGTGAGCCTTGAAGTCCGGGTAATGGGAGAAAGGGAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033490.13 |
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| 3UTR CCA 72 bp | CTCTTTATGGTCCATTTTGTTGAGGCAGGGTGGTGGTaGCTCTGGAATGGAACAGGTTGGTCATGGGGACAG | + |
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Preference number: 3 (lower is better) Translates to: LFMVHFVEAGWW*LWNGTGWSWGQ Trigger: CTGTCCCCATGACCAACCTGTTCCATTCCAGAGCCACCACCACCCTGCCTCAACAAAATGGACCATAAAGAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000033490.13 |
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| 3UTR CCA 72 bp | AGTGGTAAAAGAAGGAATGCCAAGGAGGACATGATGTaGCCTGCAACCCATGGCCAGATGTCACCTGAGGGT | + |
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Preference number: 3 (lower is better) Translates to: SGKRRNAKEDMM*PATHGQMSPEG Trigger: ACCCTCAGGTGACATCTGGCCATGGGTTGCAGGCCACATCATGTCCTCCTTGGCATTCCTTCTTTTACCACT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033490.13 |
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| 3UTR TCA 72 bp | CTCTGGAATGGAACAGGTTGGTCATGGGGACAGGAATaGACCCAACCAGGAACGAGCTCACAGTTTCCCTTT | + |
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Preference number: 3 (lower is better) Translates to: LWNGTGWSWGQE*TQPGTSSQFPF Trigger: AAAGGGAAACTGTGAGCTCGTTCCTGGTTGGGTTCATTCCTGTCCCCATGACCAACCTGTTCCATTCCAGAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033490.13 |
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| 3UTR TCA 72 bp | TGGCTCTGTTTCTTGACAACCTCTTGTACGGCCTTCTaGTTGGGCAGAGACAGAGACAGAGCTCCTTCAGGT | + |
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Preference number: 3 (lower is better) Translates to: WLCFLTTSCTAF*LGRDRDRAPSG Trigger: ACCTGAAGGAGCTCTGTCTCTGTCTCTGCCCAATCAGAAGGCCGTACAAGAGGTTGTCAAGAAACAGAGCCA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033490.13 |
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| 3UTR-3UTR CAA 90 bp | CAGCCCCAGAGACTCTTTATGGTCCATTTTGTTGAGGCAGGGTGGTGGTGGCTCATAAAACACCTAGTGTaGGGCAATGACAGAGTACTA | + |
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Preference number: 3 (lower is better) Translates to: QPQRLFMVHFVEAGWWWLIKHLV*GNDRVL Trigger: TAGTACTCTGTCATTGCCCAACACTAGGTGTTTTAT...GAGCCACCACCACCCTGCCTCAACAAAATGGACCATAAAGAGTCTCTGGGGCTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000033490.13 |
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| 3UTR GCA 72 bp | TTTGACTGGCATGTACTAGCTGCCAGGTTTAGCCACTaGAGCATCACAGGATGCAACATACTCAAATGGCTC | + |
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Preference number: 3 (lower is better) Translates to: FDWHVLAARFSH*SITGCNILKWL Trigger: GAGCCATTTGAGTATGTTGCATCCTGTGATGCTGCAGTGGCTAAACCTGGCAGCTAGTACATGCCAGTCAAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033490.13 |
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| 3UTR CCA 72 bp | AGCCACTGCAGCATCACAGGATGCAACATACTCAAATaGCTCTGTTTCTTGACAACCTCTTGTACGGCCTTC | + |
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Preference number: 3 (lower is better) Translates to: SHCSITGCNILK*LCFLTTSCTAF Trigger: GAAGGCCGTACAAGAGGTTGTCAAGAAACAGAGCCATTTGAGTATGTTGCATCCTGTGATGCTGCAGTGGCT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033490.13 |
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| 3UTR TCA 72 bp | TCACAGGATGCAACATACTCAAATGGCTCTGTTTCTTaGCAACCTCTTGTACGGCCTTCTGATTGGGCAGAG | + |
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Preference number: 3 (lower is better) Translates to: SQDATYSNGSVS*QPLVRPSDWAE Trigger: CTCTGCCCAATCAGAAGGCCGTACAAGAGGTTGTCAAGAAACAGAGCCATTTGAGTATGTTGCATCCTGTGA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033490.13 |
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| 3UTR TCA 72 bp | AGTTTATACATTTATTATAGAAATCCCCTTCCAGTGTaGGTAGTGTCTTGGGCCCAGATCCATTGGTACAAA | + |
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Preference number: 3 (lower is better) Translates to: SLYIYYRNPLPV*VVSWAQIHWYK Trigger: TTTGTACCAATGGATCTGGGCCCAAGACACTACTCACACTGGAAGGGGATTTCTATAATAAATGTATAAACT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033490.13 |
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| CDS-3UTR GCA 90 bp | AGATCAGGCAAGTGTCCCTCAGGACAAAGAGCCACCACATCTCAGGGCTCAGCGAGGGTAGGCACGTGCTaGAGGGGGCCTCCGGCGGAC | + |
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Preference number: 4 (lower is better) Translates to: RSGKCPSGQRATTSQGSARVGTC*RGPPAD Trigger: GTCCGCCGGAGGCCCCCTGCAGCACGTGCCTACCCT...CGCTGAGCCCTGAGATGTGGTGGCTCTTTGTCCTGAGGGACACTTGCCTGATCT 63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000033490.13 |
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| CDS-3UTR GCA 90 bp | CAGGCAAGTGTCCCTCAGGACAAAGAGCCACCACATCTCAGGGCTCAGCGAGGTGGGTGTTGGGGTCCTTaGTGCGGAGGAGGGGGCTGC | + |
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Preference number: 4 (lower is better) Translates to: QASVPQDKEPPHLRAQRGGCWGP*CGGGGC Trigger: GCAGCCCCCTCCTCCGCAGCAAGGACCCCAACACCC...ACCTCGCTGAGCCCTGAGATGTGGTGGCTCTTTGTCCTGAGGGACACTTGCCTG 63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000033490.13 ENSMUST00000224502.2 |
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| CDS-3UTR GCA 90 bp | GCCACCACATCTCAGGGCTCAGCGAGGTTGACTGTGTGCTCCTCAGACTGGAGTGCGGCGGGCAGCAGCTaGAATCTGCTGCTGCACCGA | + |
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Preference number: 4 (lower is better) Translates to: ATTSQGSARLTVCSSDWSAAGSS*NLLLHR Trigger: TCGGTGCAGCAGCAGATTGCAGCTGCTGCCCGCCGC...ACTCCAGTCTGAGGAGCACACAGTCAACCTCGCTGAGCCCTGAGATGTGGTGGC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033490.13 |
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| CDS-3UTR GCA 90 bp | AGATCAGGCAAGTGTCCCTCAGGACAAAGAGCCACCACATCTCAGGGCTCAGCGGCGGCGGGTACGAGCTaGGAAGAGGGAGGCCCGATC | + |
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Preference number: 4 (lower is better) Translates to: RSGKCPSGQRATTSQGSAAAGTS*EEGGPI Trigger: GATCGGGCCTCCCTCTTCGCAGCTCGTACCCGCCGC...CGCTGAGCCCTGAGATGTGGTGGCTCTTTGTCCTGAGGGACACTTGCCTGATCT 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033490.13 |
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| CDS-3UTR CCA 90 bp | GTGGTGGTGGCTCTGGAATGGAACAGGTTGGTCATGGGGACAGGAATGAACCCATGGGCAGCGAGCGTGTaGGGCTGGTGGGGCTGGCCA | + |
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Preference number: 4 (lower is better) Translates to: VVVALEWNRLVMGTGMNPWAASV*GWWGWP Trigger: TGGCCAGCCCCACCAGCCCCACACGCTCGCTGCCCA...TGGGTTCATTCCTGTCCCCATGACCAACCTGTTCCATTCCAGAGCCACCACCAC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000033490.13 |
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| CDS-3UTR CCA 90 bp | GAGATCAGGCAAGTGTCCCTCAGGACAAAGAGCCACCACATCTCAGGGCTCAGCAGCCCGAGGAGGGTCTaGGGGGCCAGTGGTACGGGA | + |
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Preference number: 4 (lower is better) Translates to: EIRQVSLRTKSHHISGLSSPRRV*GASGTG Trigger: TCCCGTACCACTGGCCCCCCAGACCCTCCTCGGGCT...GCTGAGCCCTGAGATGTGGTGGCTCTTTGTCCTGAGGGACACTTGCCTGATCTC 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000033490.13 ENSMUST00000224502.2 |
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| CDS-3UTR TCA 90 bp | TCCCTCAGGACAAAGAGCCACCACATCTCAGGGCTCAGCGAGGTTGACTGTGTGGCCTCTGTTCTCCGTTaGGGTCAGGGGCCAGGGCCA | + |
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Preference number: 4 (lower is better) Translates to: SLRTKSHHISGLSEVDCVASVLR*GQGPGP Trigger: TGGCCCTGGCCCCTGACCTCAACGGAGAACAGAGGC...CACACAGTCAACCTCGCTGAGCCCTGAGATGTGGTGGCTCTTTGTCCTGAGGGA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033490.13 |
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| CDS-3UTR TCA 90 bp | CAGCCCCAGAGACTCTTTATGGTCCATTTTGTTGAGGCAGGGTGGTGGTGGCTCGGGCCCGGAAGTCCCTaGGCTGCTCCTCCAGCTCGT | + |
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Preference number: 4 (lower is better) Translates to: QPQRLFMVHFVEAGWWWLGPGSP*AAPPAR Trigger: ACGAGCTGGAGGAGCAGCTCAGGGACTTCCGGGCCC...GAGCCACCACCACCCTGCCTCAACAAAATGGACCATAAAGAGTCTCTGGGGCTG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000033490.13 |
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| CDS-3UTR GCA 90 bp | GCCCATCTGCTCAAAGACTCTAGCGGGAGGAAGCAGGGAATTCTGTTCCCAGCAGGGTGTTGGGGTCCTTaGTGCGGAGGAGGGGGCTGC | + |
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Preference number: 4 (lower is better) Translates to: AHLLKDSSGRKQGILFPAGCWGP*CGGGGC Trigger: GCAGCCCCCTCCTCCGCAGCAAGGACCCCAACACCC...TGCTGGGAACAGAATTCCCTGCTTCCTCCCGCTAGAGTCTTTGAGCAGATGGGC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000033490.13 |
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| CDS-3UTR CCA 90 bp | TCTTTGAAGCTAGCTGGGGCCCTCCAGTTCCCCCAGCACAGGATGAGAAGAGAATGGGGCTGGTGGGGCTaGCCACAGAGTTGCGTCGGC | + |
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Preference number: 4 (lower is better) Translates to: SLKLAGALQFPQHRMRREWGWWG*PQSCVG Trigger: GCCGACGCAACTCTGTGGCCAGCCCCACCAGCCCCA...TTCTCTTCTCATCCTGTGCTGGGGGAACTGGAGGGCCCCAGCTAGCTTCAAAGA 61% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENSMUST00000033490.13 |
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| CDS-3UTR CCA 90 bp | TCTTTGAAGCTAGCTGGGGCCCTCCAGTTCCCCCAGCACAGGATGAGAAGAGAAGCGAGCGTGTGGGGCTaGTGGGGCTGGCCACAGAGT | + |
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Preference number: 4 (lower is better) Translates to: SLKLAGALQFPQHRMRREASVWG*WGWPQS Trigger: ACTCTGTGGCCAGCCCCACCAGCCCCACACGCTCGC...TTCTCTTCTCATCCTGTGCTGGGGGAACTGGAGGGCCCCAGCTAGCTTCAAAGA 61% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENSMUST00000033490.13 |
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| CDS-3UTR CCA 90 bp | GCCAGGGGTCCTGTGAGATCAGGCAAGTGTCCCTCAGGACAAAGAGCCACCACAGGATGGCACGGGTGTTaGGGTCCTTGCTGCGGAGGA | + |
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Preference number: 4 (lower is better) Translates to: ARGPVRSGKCPSGQRATTGWHGC*GPCCGG Trigger: TCCTCCGCAGCAAGGACCCCAACACCCGTGCCATCC...TGTGGTGGCTCTTTGTCCTGAGGGACACTTGCCTGATCTCACAGGACCCCTGGC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000033490.13 ENSMUST00000224502.2 |
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| CDS-3UTR CCA 90 bp | AGATCAGGCAAGTGTCCCTCAGGACAAAGAGCCACCACATCTCAGGGCTCAGCGCACGTGCGGGAGCATTaGCCTGCGCTGGGGACCAAC | + |
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Preference number: 4 (lower is better) Translates to: RSGKCPSGQRATTSQGSAHVREH*PALGTN Trigger: GTTGGTCCCCAGCGCAGGCCAATGCTCCCGCACGTG...CGCTGAGCCCTGAGATGTGGTGGCTCTTTGTCCTGAGGGACACTTGCCTGATCT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000033490.13 ENSMUST00000224502.2 |
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| CDS-3UTR TCA 90 bp | AGCCACCACATCTCAGGGCTCAGCGAGGTTGACTGTGTGCTCCTCAGACTGGAGTCCTCTTGGCTGAGCTaGGCAAGGCGTGTACCCAGG | + |
|
Preference number: 4 (lower is better) Translates to: SHHISGLSEVDCVLLRLESSWLS*ARRVPR Trigger: CCTGGGTACACGCCTTGCTCAGCTCAGCCAAGAGGA...CTCCAGTCTGAGGAGCACACAGTCAACCTCGCTGAGCCCTGAGATGTGGTGGCT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033490.13 |
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| CDS-3UTR TCA 90 bp | TCAGGCAAGTGTCCCTCAGGACAAAGAGCCACCACATCTCAGGGCTCAGCGAGGGGGAGGGCCATAGAGTaGCTGGCCCACCTCATAGCA | + |
|
Preference number: 4 (lower is better) Translates to: SGKCPSGQRATTSQGSARGRAIE*LAHLIA Trigger: TGCTATGAGGTGGGCCAGTCACTCTATGGCCCTCCC...CCTCGCTGAGCCCTGAGATGTGGTGGCTCTTTGTCCTGAGGGACACTTGCCTGA 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000033490.13 ENSMUST00000224502.2 |
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| CDS-3UTR GCA 90 bp | AGGCAAGTGTCCCTCAGGACAAAGAGCCACCACATCTCAGGGCTCAGCGAGGTTGCGCTGGGGACCAACTaGCAGTCCCGAGTTCCGGAT | + |
|
Preference number: 4 (lower is better) Translates to: RQVSLRTKSHHISGLSEVALGTN*QSRVPD Trigger: ATCCGGAACTCGGGACTGGCAGTTGGTCCCCAGCGC...AACCTCGCTGAGCCCTGAGATGTGGTGGCTCTTTGTCCTGAGGGACACTTGCCT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000033490.13 ENSMUST00000224502.2 |
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| CDS-3UTR GCA 90 bp | CAGCCCCAGAGACTCTTTATGGTCCATTTTGTTGAGGCAGGGTGGTGGTGGCTCGCGGGAGCATTGGCCTaGGCTGGGGACCAACTGCCA | + |
|
Preference number: 4 (lower is better) Translates to: QPQRLFMVHFVEAGWWWLAGALA*AGDQLP Trigger: TGGCAGTTGGTCCCCAGCGCAGGCCAATGCTCCCGC...GAGCCACCACCACCCTGCCTCAACAAAATGGACCATAAAGAGTCTCTGGGGCTG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000033490.13 |
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| CDS-3UTR CCA 90 bp | GTGTCTGGGTGTCAGAACTGGAAGACGGCTCCCCCTCTAGCGTCAGGTCACTTATGCTCCTGCAGACAGTaGCAGTGGCTGGAGCACCGG | + |
|
Preference number: 4 (lower is better) Translates to: VSGCQNWKTAPPLASGHLCSCRQ*QWLEHR Trigger: CCGGTGCTCCAGCCACTGCCACTGTCTGCAGGAGCA...TAAGTGACCTGACGCTAGAGGGGGAGCCGTCTTCCAGTTCTGACACCCAGACAC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000033490.13 |
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| CDS-3UTR CCA 90 bp | ACAAAGAGCCACCACATCTCAGGGCTCAGCGAGGTTGACTGTGTGCTCCTCAGAAGCGTGTGGGGCTGGTaGGGCTGGCCACAGAGTTGC | + |
|
Preference number: 4 (lower is better) Translates to: TKSHHISGLSEVDCVLLRSVWGW*GWPQSC Trigger: GCAACTCTGTGGCCAGCCCCACCAGCCCCACACGCT...TCTGAGGAGCACACAGTCAACCTCGCTGAGCCCTGAGATGTGGTGGCTCTTTGT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033490.13 |
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| CDS-3UTR CCA 90 bp | GCCCATCTGCTCAAAGACTCTAGCGGGAGGAAGCAGGGAATTCTGTTCCCAGCAAACTGGAGGCACTCCTaGGCAGCGAGCGTGTGGGGC | + |
|
Preference number: 4 (lower is better) Translates to: AHLLKDSSGRKQGILFPANWRHS*AASVWG Trigger: GCCCCACACGCTCGCTGCCCAGGAGTGCCTCCAGTT...TGCTGGGAACAGAATTCCCTGCTTCCTCCCGCTAGAGTCTTTGAGCAGATGGGC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033490.13 |
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| CDS-3UTR CCA 90 bp | TCAGGACAAAGAGCCACCACATCTCAGGGCTCAGCGAGGTTGACTGTGTGCTCCGGAGCGGTGCCTGGCTaGGAGGGCCATAGAGTGACT | + |
|
Preference number: 4 (lower is better) Translates to: SGQRATTSQGSARLTVCSGAVPG*EGHRVT Trigger: AGTCACTCTATGGCCCTCCCAGCCAGGCACCGCTCC...GGAGCACACAGTCAACCTCGCTGAGCCCTGAGATGTGGTGGCTCTTTGTCCTGA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000033490.13 ENSMUST00000224502.2 |
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| CDS-3UTR GCA 90 bp | CCTGTGAGATCAGGCAAGTGTCCCTCAGGACAAAGAGCCACCACATCTCAGGGCCAAGGAGCCCATCTCTaGGGGAAAGGGGTCCTGGGA | + |
|
Preference number: 4 (lower is better) Translates to: PVRSGKCPSGQRATTSQGQGAHL*GKGVLG Trigger: TCCCAGGACCCCTTTCCCGCAGAGATGGGCTCCTTG...GCCCTGAGATGTGGTGGCTCTTTGTCCTGAGGGACACTTGCCTGATCTCACAGG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000033490.13 ENSMUST00000224502.2 |
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| CDS-3UTR CCA 90 bp | TCAGATATCTTCCTGGGCCAAAAAGAAGCCAGGGGTCCTGTGAGATCAGGCAAGAGCCCGAGGAGGGTCTaGGGGGCCAGTGGTACGGGA | + |
|
Preference number: 4 (lower is better) Translates to: SDIFLGQKEARGPVRSGKSPRRV*GASGTG Trigger: TCCCGTACCACTGGCCCCCCAGACCCTCCTCGGGCT...CTTGCCTGATCTCACAGGACCCCTGGCTTCTTTTTGGCCCAGGAAGATATCTGA 59% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 2 transcripts: ENSMUST00000033490.13 ENSMUST00000224502.2 |
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| CDS-3UTR CCA 90 bp | AGGACAAAGAGCCACCACATCTCAGGGCTCAGCGAGGTTGACTGTGTGCTCCTCTATGGGTGGAGGACCTaGGAGCATGGCAAGGAGCCC | + |
|
Preference number: 4 (lower is better) Translates to: RTKSHHISGLSEVDCVLLYGWRT*EHGKEP Trigger: GGGCTCCTTGCCATGCTCCCAGGTCCTCCACCCATA...GAGGAGCACACAGTCAACCTCGCTGAGCCCTGAGATGTGGTGGCTCTTTGTCCT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000033490.13 ENSMUST00000224502.2 |
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| CDS-3UTR TCA 90 bp | CCGTGTAGTATCTTTAGAAAGGGAGGACAGCAGGAATCGGGAAGACAGGTAGGGCACTCAGGGGGCAGCTaGCCAGTTAGCTCCGCCTCC | + |
|
Preference number: 4 (lower is better) Translates to: PCSIFRKGGQQESGRQVGHSGGS*PVSSAS Trigger: GGAGGCGGAGCTAACTGGTCAGCTGCCCCCTGAGTG...CCCTACCTGTCTTCCCGATTCCTGCTGTCCTCCCTTTCTAAAGATACTACACGG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000033490.13 |
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| CDS-3UTR TCA 90 bp | ACATCTCAGGGCTCAGCGAGGTTGACTGTGTGCTCCTCAGACTGGAGTTTGTCCGGGAGGGCCATAGAGTaGCTGGCCCACCTCATAGCA | + |
|
Preference number: 4 (lower is better) Translates to: TSQGSARLTVCSSDWSLSGRAIE*LAHLIA Trigger: TGCTATGAGGTGGGCCAGTCACTCTATGGCCCTCCC...GGACAAACTCCAGTCTGAGGAGCACACAGTCAACCTCGCTGAGCCCTGAGATGT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000033490.13 ENSMUST00000224502.2 |
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| CDS-3UTR GCA 90 bp | ACATCTCAGGGCTCAGCGAGGTTGACTGTGTGCTCCTCAGACTGGAGTTTGTCCCAAGGAGCCCATCTCTaGGGGAAAGGGGTCCTGGGA | + |
|
Preference number: 4 (lower is better) Translates to: TSQGSARLTVCSSDWSLSQGAHL*GKGVLG Trigger: TCCCAGGACCCCTTTCCCGCAGAGATGGGCTCCTTG...GGACAAACTCCAGTCTGAGGAGCACACAGTCAACCTCGCTGAGCCCTGAGATGT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000033490.13 ENSMUST00000224502.2 |
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| CDS-3UTR GCA 90 bp | AGATCAGGCAAGTGTCCCTCAGGACAAAGAGCCACCACATCTCAGGGCTCAGCGTGCGGAGGAGGGGGCTaGTGCCATCAGCTGCATATA | + |
|
Preference number: 4 (lower is better) Translates to: RSGKCPSGQRATTSQGSACGGGG*CHQLHI Trigger: TATATGCAGCTGATGGCAGCAGCCCCCTCCTCCGCA...CGCTGAGCCCTGAGATGTGGTGGCTCTTTGTCCTGAGGGACACTTGCCTGATCT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000033490.13 ENSMUST00000224502.2 |
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| CDS-3UTR GCA 90 bp | TCCCTCAGGACAAAGAGCCACCACATCTCAGGGCTCAGCGAGGTTGACTGTGTGTGCGGAGGAGGGGGCTaGTGCCATCAGCTGCATATA | + |
|
Preference number: 4 (lower is better) Translates to: SLRTKSHHISGLSEVDCVCGGGG*CHQLHI Trigger: TATATGCAGCTGATGGCAGCAGCCCCCTCCTCCGCA...CACACAGTCAACCTCGCTGAGCCCTGAGATGTGGTGGCTCTTTGTCCTGAGGGA 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000033490.13 ENSMUST00000224502.2 |
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| CDS-3UTR GCA 90 bp | GGGCTCAGCGAGGTTGACTGTGTGCTCCTCAGACTGGAGTTTGTCCAGACCGACAATCCGTGTAGTATCTaGCAGAGACAGGGGGCGCTG | + |
|
Preference number: 4 (lower is better) Translates to: GLSEVDCVLLRLEFVQTDNPCSI*QRQGAL Trigger: CAGCGCCCCCTGTCTCTGGCAGATACTACACGGATT...GTCGGTCTGGACAAACTCCAGTCTGAGGAGCACACAGTCAACCTCGCTGAGCCC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000224502.2 |
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| CDS-3UTR CCA 90 bp | GTGGTGGTGGCTCTGGAATGGAACAGGTTGGTCATGGGGACAGGAATGAACCCAGTGGTGTGCTGGGTTTaGGTGTGGTGGAGGGTAGGC | + |
|
Preference number: 4 (lower is better) Translates to: VVVALEWNRLVMGTGMNPVVCWV*VWWRVG Trigger: GCCTACCCTCCACCACACCCAAACCCAGCACACCAC...TGGGTTCATTCCTGTCCCCATGACCAACCTGTTCCATTCCAGAGCCACCACCAC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033490.13 |
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| CDS-3UTR CCA 90 bp | TCAGGACAAAGAGCCACCACATCTCAGGGCTCAGCGAGGTTGACTGTGTGCTCCGGCTCCTCGTTATCATaGCTGGCCCCTGACTCTGAG | + |
|
Preference number: 4 (lower is better) Translates to: SGQRATTSQGSARLTVCSGSSLS*LAPDSE Trigger: CTCAGAGTCAGGGGCCAGCCATGATAACGAGGAGCC...GGAGCACACAGTCAACCTCGCTGAGCCCTGAGATGTGGTGGCTCTTTGTCCTGA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033490.13 |
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| CDS-3UTR CCA 90 bp | TCAGGACAAAGAGCCACCACATCTCAGGGCTCAGCGAGGTTGACTGTGTGCTCCGTAAGCCACTGGGCTTaGAACGGATGGCACGGGTGT | + |
|
Preference number: 4 (lower is better) Translates to: SGQRATTSQGSARLTVCSVSHWA*NGWHGC Trigger: ACACCCGTGCCATCCGTTCCAAGCCCAGTGGCTTAC...GGAGCACACAGTCAACCTCGCTGAGCCCTGAGATGTGGTGGCTCTTTGTCCTGA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000033490.13 ENSMUST00000224502.2 |
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| CDS-3UTR CCA 90 bp | GGGCTCAGCGAGGTTGACTGTGTGCTCCTCAGACTGGAGTTTGTCCAGACCGACAAGGCAAGGTTCTTGTaGCCACCTCGCTCTCCAGCT | + |
|
Preference number: 4 (lower is better) Translates to: GLSEVDCVLLRLEFVQTDKARFL*PPRSPA Trigger: AGCTGGAGAGCGAGGTGGCCACAAGAACCTTGCCTT...GTCGGTCTGGACAAACTCCAGTCTGAGGAGCACACAGTCAACCTCGCTGAGCCC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000033490.13 ENSMUST00000224502.2 |
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| CDS-3UTR TCA 90 bp | AGCAGGAGTATCAGATATCTTCCTGGGCCAAAAAGAAGCCAGGGGTCCTGTGAGCCCATCTGGGAGTCCTaGCTACCGGACCACTGGCGA | + |
|
Preference number: 4 (lower is better) Translates to: SRSIRYLPGPKRSQGSCEPIWES*LPDHWR Trigger: TCGCCAGTGGTCCGGTAGTCAGGACTCCCAGATGGG...CTCACAGGACCCCTGGCTTCTTTTTGGCCCAGGAAGATATCTGATACTCCTGCT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000033490.13 |
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| CDS-3UTR GCA 90 bp | GTGTCTGGGTGTCAGAACTGGAAGACGGCTCCCCCTCTAGCGTCAGGTCACTTAGTTAGCTCCGCCTCCTaGAGACACACTTTCCTGAGC | + |
|
Preference number: 4 (lower is better) Translates to: VSGCQNWKTAPPLASGHLVSSAS*RHTFLS Trigger: GCTCAGGAAAGTGTGTCTGCAGGAGGCGGAGCTAAC...TAAGTGACCTGACGCTAGAGGGGGAGCCGTCTTCCAGTTCTGACACCCAGACAC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000033490.13 |
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| CDS-3UTR GCA 90 bp | CAGGGGTCCTGTGAGATCAGGCAAGTGTCCCTCAGGACAAAGAGCCACCACATCACACAAGGAGTGGTGTaGTGGGTTTGGGTGTGGTGG | + |
|
Preference number: 4 (lower is better) Translates to: QGSCEIRQVSLRTKSHHITQGVV*WVWVWW Trigger: CCACCACACCCAAACCCAGCACACCACTCCTTGTGT...GATGTGGTGGCTCTTTGTCCTGAGGGACACTTGCCTGATCTCACAGGACCCCTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033490.13 |
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| CDS-3UTR GCA 90 bp | CCGTGTAGTATCTTTAGAAAGGGAGGACAGCAGGAATCGGGAAGACAGGTAGGGGGCTGGCCACAGAGTTaGGTCGGCTCTTCAGGTCCC | + |
|
Preference number: 4 (lower is better) Translates to: PCSIFRKGGQQESGRQVGGWPQS*VGSSGP Trigger: GGGACCTGAAGAGCCGACGCAACTCTGTGGCCAGCC...CCCTACCTGTCTTCCCGATTCCTGCTGTCCTCCCTTTCTAAAGATACTACACGG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000033490.13 |
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| CDS-3UTR GCA 90 bp | AAGTGTCCCTCAGGACAAAGAGCCACCACATCTCAGGGCTCAGCGAGGTTGACTGCACCTCACTGCTCTTaGAAACTGGGGGACCAGCAG | + |
|
Preference number: 4 (lower is better) Translates to: KCPSGQRATTSQGSARLTAPHCS*KLGDQQ Trigger: CTGCTGGTCCCCCAGTTTGCAAGAGCAGTGAGGTGC...AGTCAACCTCGCTGAGCCCTGAGATGTGGTGGCTCTTTGTCCTGAGGGACACTT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000033490.13 ENSMUST00000224502.2 |
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| CDS-3UTR GCA 90 bp | ACATCTCAGGGCTCAGCGAGGTTGACTGTGTGCTCCTCAGACTGGAGTTTGTCCAAGGAAGGGACTGGTTaGGGGCGCTCATACAGCACC | + |
|
Preference number: 4 (lower is better) Translates to: TSQGSARLTVCSSDWSLSKEGTG*GRSYST Trigger: GGTGCTGTATGAGCGCCCGCAACCAGTCCCTTCCTT...GGACAAACTCCAGTCTGAGGAGCACACAGTCAACCTCGCTGAGCCCTGAGATGT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000033490.13 ENSMUST00000224502.2 |
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| CDS-3UTR GCA 90 bp | ACAAAGAGCCACCACATCTCAGGGCTCAGCGAGGTTGACTGTGTGCTCCTCAGAAAGGAAGGGACTGGTTaGGGGCGCTCATACAGCACC | + |
|
Preference number: 4 (lower is better) Translates to: TKSHHISGLSEVDCVLLRKEGTG*GRSYST Trigger: GGTGCTGTATGAGCGCCCGCAACCAGTCCCTTCCTT...TCTGAGGAGCACACAGTCAACCTCGCTGAGCCCTGAGATGTGGTGGCTCTTTGT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000033490.13 ENSMUST00000224502.2 |
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| CDS-3UTR GCA 90 bp | TCTTTGAAGCTAGCTGGGGCCCTCCAGTTCCCCCAGCACAGGATGAGAAGAGAAGGAGGAGGGGGCTGCTaGCATCAGCTGCATATATGG | + |
|
Preference number: 4 (lower is better) Translates to: SLKLAGALQFPQHRMRREGGGGC*HQLHIW Trigger: CCATATATGCAGCTGATGGCAGCAGCCCCCTCCTCC...TTCTCTTCTCATCCTGTGCTGGGGGAACTGGAGGGCCCCAGCTAGCTTCAAAGA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000033490.13 |
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| CDS-3UTR GCA 90 bp | AGGAGTATCAGATATCTTCCTGGGCCAAAAAGAAGCCAGGGGTCCTGTGAGATCGCGGGAGCATTGGCCTaGGCTGGGGACCAACTGCCA | + |
|
Preference number: 4 (lower is better) Translates to: RSIRYLPGPKRSQGSCEIAGALA*AGDQLP Trigger: TGGCAGTTGGTCCCCAGCGCAGGCCAATGCTCCCGC...GATCTCACAGGACCCCTGGCTTCTTTTTGGCCCAGGAAGATATCTGATACTCCT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000033490.13 ENSMUST00000224502.2 |
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| CDS-3UTR CCA 90 bp | CAGCCCCAGAGACTCTTTATGGTCCATTTTGTTGAGGCAGGGTGGTGGTGGCTCCCTCGTTATCATGGCTaGCCCCTGACTCTGAGAGGG | + |
|
Preference number: 4 (lower is better) Translates to: QPQRLFMVHFVEAGWWWLPRYHG*PLTLRG Trigger: CCCTCTCAGAGTCAGGGGCCAGCCATGATAACGAGG...GAGCCACCACCACCCTGCCTCAACAAAATGGACCATAAAGAGTCTCTGGGGCTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000033490.13 |
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| CDS-3UTR CCA 90 bp | TCAGGACAAAGAGCCACCACATCTCAGGGCTCAGCGAGGTTGACTGTGTGCTCCAGAGAAGGAAGGGACTaGTTGCGGGCGCTCATACAG | + |
|
Preference number: 4 (lower is better) Translates to: SGQRATTSQGSARLTVCSREGRD*LRALIQ Trigger: CTGTATGAGCGCCCGCAACCAGTCCCTTCCTTCTCT...GGAGCACACAGTCAACCTCGCTGAGCCCTGAGATGTGGTGGCTCTTTGTCCTGA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000033490.13 ENSMUST00000224502.2 |
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| CDS-3UTR CCA 90 bp | AGGCAAGTGTCCCTCAGGACAAAGAGCCACCACATCTCAGGGCTCAGCGAGGTTAGAGAAGGAAGGGACTaGTTGCGGGCGCTCATACAG | + |
|
Preference number: 4 (lower is better) Translates to: RQVSLRTKSHHISGLSEVREGRD*LRALIQ Trigger: CTGTATGAGCGCCCGCAACCAGTCCCTTCCTTCTCT...AACCTCGCTGAGCCCTGAGATGTGGTGGCTCTTTGTCCTGAGGGACACTTGCCT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000033490.13 ENSMUST00000224502.2 |
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| CDS-3UTR CCA 90 bp | AAGTGTCCCTCAGGACAAAGAGCCACCACATCTCAGGGCTCAGCGAGGTTGACTGTAAGCCACTGGGCTTaGAACGGATGGCACGGGTGT | + |
|
Preference number: 4 (lower is better) Translates to: KCPSGQRATTSQGSARLTVSHWA*NGWHGC Trigger: ACACCCGTGCCATCCGTTCCAAGCCCAGTGGCTTAC...AGTCAACCTCGCTGAGCCCTGAGATGTGGTGGCTCTTTGTCCTGAGGGACACTT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000033490.13 ENSMUST00000224502.2 |
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| CDS-3UTR CCA 90 bp | TCCCTCAGGACAAAGAGCCACCACATCTCAGGGCTCAGCGAGGTTGACTGTGTGTCTGGGTGTCAGAACTaGAAGACGGCTCCCCCTCTA | + |
|
Preference number: 4 (lower is better) Translates to: SLRTKSHHISGLSEVDCVSGCQN*KTAPPL Trigger: TAGAGGGGGAGCCGTCTTCCAGTTCTGACACCCAGA...CACACAGTCAACCTCGCTGAGCCCTGAGATGTGGTGGCTCTTTGTCCTGAGGGA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000224502.2 |
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| 3UTR CAA 72 bp | TCAGCGAGGTTGACTGTGTGCTCCTCAGACTGGAGTTaGTCCAGACCGACACAGGGCTTAGGGTCAGACCAG | + |
|
Preference number: 4 (lower is better) Translates to: SARLTVCSSDWS*SRPTQGLGSDQ Trigger: CTGGTCTGACCCTAAGCCCTGTGTCGGTCTGGACAAACTCCAGTCTGAGGAGCACACAGTCAACCTCGCTGA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033490.13 |
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| CDS-3UTR TCA 90 bp | GTGGTGGTGGCTCTGGAATGGAACAGGTTGGTCATGGGGACAGGAATGAACCCACTACATCCTCTTGGCTaGGCTGAGCAAGGCGTGTAC | + |
|
Preference number: 4 (lower is better) Translates to: VVVALEWNRLVMGTGMNPLHPLG*AEQGVY Trigger: GTACACGCCTTGCTCAGCTCAGCCAAGAGGATGTAG...TGGGTTCATTCCTGTCCCCATGACCAACCTGTTCCATTCCAGAGCCACCACCAC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033490.13 |
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| CDS-3UTR CCA 90 bp | TCAGATATCTTCCTGGGCCAAAAAGAAGCCAGGGGTCCTGTGAGATCAGGCAAGTGCTGGGTTTGGGTGTaGTGGAGGGTAGGCACGTGC | + |
|
Preference number: 4 (lower is better) Translates to: SDIFLGQKEARGPVRSGKCWVWV*WRVGTC Trigger: GCACGTGCCTACCCTCCACCACACCCAAACCCAGCA...CTTGCCTGATCTCACAGGACCCCTGGCTTCTTTTTGGCCCAGGAAGATATCTGA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000033490.13 |
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| CDS-3UTR CCA 90 bp | AGGCAAGTGTCCCTCAGGACAAAGAGCCACCACATCTCAGGGCTCAGCGAGGTTGATACTGCCCGAAACTaGTCCCACGCTTTTGGTGGT | + |
|
Preference number: 4 (lower is better) Translates to: RQVSLRTKSHHISGLSEVDTARN*SHAFGG Trigger: ACCACCAAAAGCGTGGGACCAGTTTCGGGCAGTATC...AACCTCGCTGAGCCCTGAGATGTGGTGGCTCTTTGTCCTGAGGGACACTTGCCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033490.13 |
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| CDS-3UTR CCA 90 bp | GGAGTATCAGATATCTTCCTGGGCCAAAAAGAAGCCAGGGGTCCTGTGAGATCAGGATGGCACGGGTGTTaGGGTCCTTGCTGCGGAGGA | + |
|
Preference number: 4 (lower is better) Translates to: GVSDIFLGQKEARGPVRSGWHGC*GPCCGG Trigger: TCCTCCGCAGCAAGGACCCCAACACCCGTGCCATCC...TGATCTCACAGGACCCCTGGCTTCTTTTTGGCCCAGGAAGATATCTGATACTCC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000033490.13 ENSMUST00000224502.2 |
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| CDS-3UTR CCA 90 bp | GGAAATCCGTGTAGTATCTTTAGAAAGGGAGGACAGCAGGAATCGGGAAGACAGCACGTGCGGGAGCATTaGCCTGCGCTGGGGACCAAC | + |
|
Preference number: 4 (lower is better) Translates to: GNPCSIFRKGGQQESGRQHVREH*PALGTN Trigger: GTTGGTCCCCAGCGCAGGCCAATGCTCCCGCACGTG...CTGTCTTCCCGATTCCTGCTGTCCTCCCTTTCTAAAGATACTACACGGATTTCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033490.13 |
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| CDS-3UTR CCA 90 bp | AGGCAAGTGTCCCTCAGGACAAAGAGCCACCACATCTCAGGGCTCAGCGAGGTTAGTGTCCCTGGTGTCTaGGTGTCAGAACTGGAAGAC | + |
|
Preference number: 4 (lower is better) Translates to: RQVSLRTKSHHISGLSEVSVPGV*VSELED Trigger: GTCTTCCAGTTCTGACACCCAGACACCAGGGACACT...AACCTCGCTGAGCCCTGAGATGTGGTGGCTCTTTGTCCTGAGGGACACTTGCCT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000224502.2 |
||
| CDS-3UTR CCA 90 bp | CAAGTGTCCCTCAGGACAAAGAGCCACCACATCTCAGGGCTCAGCGAGGTTGACTCAGACCAGTGTCCCTaGTGTCTGGGTGTCAGAACT | + |
|
Preference number: 4 (lower is better) Translates to: QVSLRTKSHHISGLSEVDSDQCP*CLGVRT Trigger: AGTTCTGACACCCAGACACCAGGGACACTGGTCTGA...GTCAACCTCGCTGAGCCCTGAGATGTGGTGGCTCTTTGTCCTGAGGGACACTTG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000224502.2 |
||
| CDS-3UTR GCA 90 bp | CAGCCCCAGAGACTCTTTATGGTCCATTTTGTTGAGGCAGGGTGGTGGTGGCTCCATACAGCACCTCACTaGTCTTGCAAACTGGGGGAC | + |
|
Preference number: 4 (lower is better) Translates to: QPQRLFMVHFVEAGWWWLHTAPH*SCKLGD Trigger: GTCCCCCAGTTTGCAAGAGCAGTGAGGTGCTGTATG...GAGCCACCACCACCCTGCCTCAACAAAATGGACCATAAAGAGTCTCTGGGGCTG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000033490.13 |
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| CDS-3UTR CCA 90 bp | AGCGAGGTTGACTGTGTGCTCCTCAGACTGGAGTTTGTCCAGACCGACACAGGGCAAGCCTCGGTCCAATaGATAGTCCAAGAGGAAGTC | + |
|
Preference number: 4 (lower is better) Translates to: SEVDCVLLRLEFVQTDTGQASVQ*IVQEEV Trigger: GACTTCCTCTTGGACTATCCATTGGACCGAGGCTTG...CCCTGTGTCGGTCTGGACAAACTCCAGTCTGAGGAGCACACAGTCAACCTCGCT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000033490.13 ENSMUST00000224502.2 |
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| CDS-3UTR CCA 90 bp | ACAGAGCTCCTTCAGGTACCCCCACTTAGACTTCCATCCTTCCAAATGTGGACATATGGGTGGAGGACCTaGGAGCATGGCAAGGAGCCC | + |
|
Preference number: 4 (lower is better) Translates to: TELLQVPPLRLPSFQMWTYGWRT*EHGKEP Trigger: GGGCTCCTTGCCATGCTCCCAGGTCCTCCACCCATA...TGTCCACATTTGGAAGGATGGAAGTCTAAGTGGGGGTACCTGAAGGAGCTCTGT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000033490.13 |
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| 3UTR CAA 72 bp | TCTCCCAGCCCCAGAGACTCTTTATGGTCCATTTTGTaGAGGCAGGGTGGTGGTGGCTCTGGAATGGAACAG | + |
|
Preference number: 4 (lower is better) Translates to: SPSPRDSLWSIL*RQGGGGSGMEQ Trigger: CTGTTCCATTCCAGAGCCACCACCACCCTGCCTCAACAAAATGGACCATAAAGAGTCTCTGGGGCTGGGAGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000033490.13 |
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| CDS-3UTR TCA 90 bp | GTGGTGGTGGCTCTGGAATGGAACAGGTTGGTCATGGGGACAGGAATGAACCCAACTTTCCTGAGCTCTTaGAGTTTTACGCTCAGGGCC | + |
|
Preference number: 4 (lower is better) Translates to: VVVALEWNRLVMGTGMNPTFLSS*SFTLRA Trigger: GGCCCTGAGCGTAAAACTTCAAGAGCTCAGGAAAGT...TGGGTTCATTCCTGTCCCCATGACCAACCTGTTCCATTCCAGAGCCACCACCAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000033490.13 |
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| CDS-3UTR TCA 90 bp | TCAGGACAAAGAGCCACCACATCTCAGGGCTCAGCGAGGTTGACTGTGTGCTCCGCAGACACACTTTCCTaGGCTCTTGAAGTTTTACGC | + |
|
Preference number: 4 (lower is better) Translates to: SGQRATTSQGSARLTVCSADTLS*ALEVLR Trigger: GCGTAAAACTTCAAGAGCTCAGGAAAGTGTGTCTGC...GGAGCACACAGTCAACCTCGCTGAGCCCTGAGATGTGGTGGCTCTTTGTCCTGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033490.13 |
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| CDS-3UTR TCA 90 bp | CAGCATCACAGGATGCAACATACTCAAATGGCTCTGTTTCTTGACAACCTCTTGCTCCGGCGGACCAACTaGGGTCGTTCACCAGGCTCC | + |
|
Preference number: 4 (lower is better) Translates to: QHHRMQHTQMALFLDNLLLRRTN*GRSPGS Trigger: GGAGCCTGGTGAACGACCTCAGTTGGTCCGCCGGAG...CAAGAGGTTGTCAAGAAACAGAGCCATTTGAGTATGTTGCATCCTGTGATGCTG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033490.13 |
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| CDS-3UTR TCA 90 bp | TCAGATATCTTCCTGGGCCAAAAAGAAGCCAGGGGTCCTGTGAGATCAGGCAAGAGACACCCTGGGCATTaGCTAGTGCTCCTGCAGACA | + |
|
Preference number: 4 (lower is better) Translates to: SDIFLGQKEARGPVRSGKRHPGH*LVLLQT Trigger: TGTCTGCAGGAGCACTAGTCAATGCCCAGGGTGTCT...CTTGCCTGATCTCACAGGACCCCTGGCTTCTTTTTGGCCCAGGAAGATATCTGA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000033490.13 |
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| CDS-3UTR GCA 90 bp | GCTGTTAAAGAGGTGGAGACAGGTACAGGACAGCACCTTCAGGTTCTCAAGCATGCTGCAATCTGCTGCTaGACCGATACCTCCCTCTCC | + |
|
Preference number: 4 (lower is better) Translates to: AVKEVETGTGQHLQVLKHAAICC*TDTSLS Trigger: GGAGAGGGAGGTATCGGTGCAGCAGCAGATTGCAGC...ATGCTTGAGAACCTGAAGGTGCTGTCCTGTACCTGTCTCCACCTCTTTAACAGC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033490.13 |
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| CDS-3UTR GCA 90 bp | GCTCACAGTTTCCCTTTTATAAAACACCTAGTGTTGGGCAATGACAGAGTACTAAGCTCCGCCAGCAGCTaGGCGGTCCACCAGCAGGGC | + |
|
Preference number: 4 (lower is better) Translates to: AHSFPFIKHLVLGNDRVLSSASS*AVHQQG Trigger: GCCCTGCTGGTGGACCGCGCAGCTGCTGGCGGAGCT...TAGTACTCTGTCATTGCCCAACACTAGGTGTTTTATAAAAGGGAAACTGTGAGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000033490.13 |
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| CDS-3UTR GCA 90 bp | ACAGAGCTCCTTCAGGTACCCCCACTTAGACTTCCATCCTTCCAAATGTGGACAGCACCTCACTGCTCTTaGAAACTGGGGGACCAGCAG | + |
|
Preference number: 4 (lower is better) Translates to: TELLQVPPLRLPSFQMWTAPHCS*KLGDQQ Trigger: CTGCTGGTCCCCCAGTTTGCAAGAGCAGTGAGGTGC...TGTCCACATTTGGAAGGATGGAAGTCTAAGTGGGGGTACCTGAAGGAGCTCTGT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000033490.13 |
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| CDS-3UTR GCA 90 bp | AGGAGTATCAGATATCTTCCTGGGCCAAAAAGAAGCCAGGGGTCCTGTGAGATCGGAGGAGGGGGCTGCTaGCATCAGCTGCATATATGG | + |
|
Preference number: 4 (lower is better) Translates to: RSIRYLPGPKRSQGSCEIGGGGC*HQLHIW Trigger: CCATATATGCAGCTGATGGCAGCAGCCCCCTCCTCC...GATCTCACAGGACCCCTGGCTTCTTTTTGGCCCAGGAAGATATCTGATACTCCT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 2 transcripts: ENSMUST00000033490.13 ENSMUST00000224502.2 |
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| CDS-3UTR GCA 90 bp | AGCCACCACATCTCAGGGCTCAGCGAGGTTGACTGTGTGCTCCTCAGACTGGAGAGTAATGGATTTGGATaGACTTCCAGACCCTCCACA | + |
|
Preference number: 4 (lower is better) Translates to: SHHISGLSEVDCVLLRLESNGFG*TSRPST Trigger: TGTGGAGGGTCTGGAAGTGCATCCAAATCCATTACT...CTCCAGTCTGAGGAGCACACAGTCAACCTCGCTGAGCCCTGAGATGTGGTGGCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000033490.13 ENSMUST00000224502.2 |
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| CDS-3UTR CCA 90 bp | AGGATGCAACATACTCAAATGGCTCTGTTTCTTGACAACCTCTTGTACGGCCTTTGCAGACAGTGGCAGTaGCTGGAGCACCGGGAGGCC | + |
|
Preference number: 4 (lower is better) Translates to: RMQHTQMALFLDNLLYGLCRQWQ*LEHREA Trigger: GGCCTCCCGGTGCTCCAGCCACTGCCACTGTCTGCA...AAGGCCGTACAAGAGGTTGTCAAGAAACAGAGCCATTTGAGTATGTTGCATCCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033490.13 |
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| CDS-3UTR CCA 90 bp | CACCACATCTCAGGGCTCAGCGAGGTTGACTGTGTGCTCCTCAGACTGGAGTTTCAAGCCTCGGTCCAATaGATAGTCCAAGAGGAAGTC | + |
|
Preference number: 4 (lower is better) Translates to: HHISGLSEVDCVLLRLEFQASVQ*IVQEEV Trigger: GACTTCCTCTTGGACTATCCATTGGACCGAGGCTTG...AAACTCCAGTCTGAGGAGCACACAGTCAACCTCGCTGAGCCCTGAGATGTGGTG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000033490.13 ENSMUST00000224502.2 |
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| CDS-3UTR GCA 90 bp | CCGTGTAGTATCTTTAGAAAGGGAGGACAGCAGGAATCGGGAAGACAGGTAGGGACTCTGAGAGGGAGCTaGTCTCCGAGTGCAGAACTA | + |
|
Preference number: 4 (lower is better) Translates to: PCSIFRKGGQQESGRQVGTLRGS*SPSAEL Trigger: TAGTTCTGCACTCGGAGAGCAGCTCCCTCTCAGAGT...CCCTACCTGTCTTCCCGATTCCTGCTGTCCTCCCTTTCTAAAGATACTACACGG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033490.13 |
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| CDS-3UTR GCA 90 bp | TCAGATATCTTCCTGGGCCAAAAAGAAGCCAGGGGTCCTGTGAGATCAGGCAAGCATACAGCACCTCACTaGTCTTGCAAACTGGGGGAC | + |
|
Preference number: 4 (lower is better) Translates to: SDIFLGQKEARGPVRSGKHTAPH*SCKLGD Trigger: GTCCCCCAGTTTGCAAGAGCAGTGAGGTGCTGTATG...CTTGCCTGATCTCACAGGACCCCTGGCTTCTTTTTGGCCCAGGAAGATATCTGA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 2 transcripts: ENSMUST00000033490.13 ENSMUST00000224502.2 |
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| CDS-3UTR GCA 90 bp | AGGATGCAACATACTCAAATGGCTCTGTTTCTTGACAACCTCTTGTACGGCCTTAAGCACCCCCATACCTaGCAGAGACAGGGGGCGCTG | + |
|
Preference number: 4 (lower is better) Translates to: RMQHTQMALFLDNLLYGLKHPHT*QRQGAL Trigger: CAGCGCCCCCTGTCTCTGGCAGGTATGGGGGTGCTT...AAGGCCGTACAAGAGGTTGTCAAGAAACAGAGCCATTTGAGTATGTTGCATCCT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000033490.13 |
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| CDS-3UTR CCA 90 bp | CAGCATCACAGGATGCAACATACTCAAATGGCTCTGTTTCTTGACAACCTCTTGGACAGTGGCAGTGGCTaGAGCACCGGGAGGCCAAGA | + |
|
Preference number: 4 (lower is better) Translates to: QHHRMQHTQMALFLDNLLDSGSG*STGRPR Trigger: TCTTGGCCTCCCGGTGCTCCAGCCACTGCCACTGTC...CAAGAGGTTGTCAAGAAACAGAGCCATTTGAGTATGTTGCATCCTGTGATGCTG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033490.13 |
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| CDS-3UTR CCA 90 bp | GAGAATAGAAAACCCCTTCTAAAGCTTGGGAAAGAACTGCTACCAACACCCAAGGGAGCGGTGCCTGGCTaGGAGGGCCATAGAGTGACT | + |
|
Preference number: 4 (lower is better) Translates to: ENRKPLLKLGKELLPTPKGAVPG*EGHRVT Trigger: AGTCACTCTATGGCCCTCCCAGCCAGGCACCGCTCC...CTTGGGTGTTGGTAGCAGTTCTTTCCCAAGCTTTAGAAGGGGTTTTCTATTCTC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000033490.13 |
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| CDS-3UTR CCA 90 bp | GGAAATCCGTGTAGTATCTTTAGAAAGGGAGGACAGCAGGAATCGGGAAGACAGAAGGCAAGGTTCTTGTaGCCACCTCGCTCTCCAGCT | + |
|
Preference number: 4 (lower is better) Translates to: GNPCSIFRKGGQQESGRQKARFL*PPRSPA Trigger: AGCTGGAGAGCGAGGTGGCCACAAGAACCTTGCCTT...CTGTCTTCCCGATTCCTGCTGTCCTCCCTTTCTAAAGATACTACACGGATTTCC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033490.13 |
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| CDS-3UTR GCA 90 bp | CAGGAAATCCGTGTAGTATCTTTAGAAAGGGAGGACAGCAGGAATCGGGAAGACGAGCTGCTCTCCGAGTaGAGAACTACATCCTCTTGG | + |
|
Preference number: 4 (lower is better) Translates to: QEIRVVSLEREDSRNREDELLSE*RTTSSW Trigger: CCAAGAGGATGTAGTTCTGCACTCGGAGAGCAGCTC...GTCTTCCCGATTCCTGCTGTCCTCCCTTTCTAAAGATACTACACGGATTTCCTG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033490.13 |
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| CDS-3UTR GCA 90 bp | CTTCTGATTGGGCAGAGACAGAGACAGAGCTCCTTCAGGTACCCCCACTTAGACAGTAATGGATTTGGATaGACTTCCAGACCCTCCACA | + |
|
Preference number: 4 (lower is better) Translates to: LLIGQRQRQSSFRYPHLDSNGFG*TSRPST Trigger: TGTGGAGGGTCTGGAAGTGCATCCAAATCCATTACT...GTCTAAGTGGGGGTACCTGAAGGAGCTCTGTCTCTGTCTCTGCCCAATCAGAAG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000033490.13 |
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| CDS-3UTR GCA 90 bp | GCTCACAGTTTCCCTTTTATAAAACACCTAGTGTTGGGCAATGACAGAGTACTAGCGCTGGGGACCAACTaGCAGTCCCGAGTTCCGGAT | + |
|
Preference number: 4 (lower is better) Translates to: AHSFPFIKHLVLGNDRVLALGTN*QSRVPD Trigger: ATCCGGAACTCGGGACTGGCAGTTGGTCCCCAGCGC...TAGTACTCTGTCATTGCCCAACACTAGGTGTTTTATAAAAGGGAAACTGTGAGC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000033490.13 |
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| CDS-3UTR CCA 90 bp | CAGCATCACAGGATGCAACATACTCAAATGGCTCTGTTTCTTGACAACCTCTTGGCAGGACACAAGGAGTaGTGTGCTGGGTTTGGGTGT | + |
|
Preference number: 4 (lower is better) Translates to: QHHRMQHTQMALFLDNLLAGHKE*CAGFGC Trigger: ACACCCAAACCCAGCACACCACTCCTTGTGTCCTGC...CAAGAGGTTGTCAAGAAACAGAGCCATTTGAGTATGTTGCATCCTGTGATGCTG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033490.13 |
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| CDS GCA 90 bp | CTCCGCCAGCAGCTGCGCGGTCCACCAGCAGGGCCTCAGAGCTATTaGTGCGGCGGGTACGAGCTGCGAAGAGGGAGGCCCGATCCGAAG | + |
|
Preference number: 5 (lower is better) Translates to: LRQQLRGPPAGPQSY*CGGYELRRGRPDPK Trigger: CTTCGGATCGGGCCTCCCTCTTCGCAGCTCGTACCCGCCGCAGCAATAGCTCTGAGGCCCTGCTGGTGGACCGCGCAGCTGCTGGCGGAG 69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033490.13 |
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| CDS CCA 90 bp | AAGGGGGTGTGTGTTGGCCCCACGTGCGGGAGCATTGGCCTGCGCTaGGGACCAACTGCCAGTCCCGAGTTCCGGATGTACCAGTCCCGC | + |
|
Preference number: 5 (lower is better) Translates to: KGVCVGPTCGSIGLR*GPTASPEFRMYQSR Trigger: GCGGGACTGGTACATCCGGAACTCGGGACTGGCAGTTGGTCCCCAGCGCAGGCCAATGCTCCCGCACGTGGGGCCAACACACACCCCCTT 67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000033490.13 ENSMUST00000224502.2 |
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| CDS TCA 90 bp | GCAGTGGCTGGAGCACCGGGAGGCCAAGACGGGCCCGGAAGTCCCTaGGCTGCTCCTCCAGCTCGTGCAGCCTTCGAAGTGCATCAACCT | + |
|
Preference number: 5 (lower is better) Translates to: AVAGAPGGQDGPGSP*AAPPARAAFEVHQP Trigger: AGGTTGATGCACTTCGAAGGCTGCACGAGCTGGAGGAGCAGCTCAGGGACTTCCGGGCCCGTCTTGGCCTCCCGGTGCTCCAGCCACTGC 66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033490.13 |
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| CDS GCA 90 bp | CAAGGAGTGGTGTGCTGGGTTTGGGTGTGGTGGAGGGTAGGCACGTaGTGCAGGGGGCCTCCGGCGGACCAACTGAGGTCGTTCACCAGG | + |
|
Preference number: 5 (lower is better) Translates to: QGVVCWVWVWWRVGT*CRGPPADQLRSFTR Trigger: CCTGGTGAACGACCTCAGTTGGTCCGCCGGAGGCCCCCTGCAGCACGTGCCTACCCTCCACCACACCCAAACCCAGCACACCACTCCTTG 66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000033490.13 |
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| CDS GCA 90 bp | GGCTGGAGCACCGGGAGGCCAAGACGGGCCCGGAAGTCCCTGAGCTaGTCCTCCAGCTCGTGCAGCCTTCGAAGTGCATCAACCTGTACC | + |
|
Preference number: 5 (lower is better) Translates to: GWSTGRPRRARKSLS*SSSSCSLRSASTCT Trigger: GGTACAGGTTGATGCACTTCGAAGGCTGCACGAGCTGGAGGAGCAGCTCAGGGACTTCCGGGCCCGTCTTGGCCTCCCGGTGCTCCAGCC 66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033490.13 |
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| CDS GCA 90 bp | GTCCACCAGCAGGGCCTCAGAGCTATTGCTGCGGCGGGTACGAGCTaGGAAGAGGGAGGCCCGATCCGAAGCAGGGTCAGGCCGAGGAAA | + |
|
Preference number: 5 (lower is better) Translates to: VHQQGLRAIAAAGTS*EEGGPIRSRVRPRK Trigger: TTTCCTCGGCCTGACCCTGCTTCGGATCGGGCCTCCCTCTTCGCAGCTCGTACCCGCCGCAGCAATAGCTCTGAGGCCCTGCTGGTGGAC 66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033490.13 |
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| CDS CCA 90 bp | ACACCCTGGGCATTGACTAGTGCTCCTGCAGACAGTGGCAGTGGCTaGAGCACCGGGAGGCCAAGACGGGCCCGGAAGTCCCTGAGCTGC | + |
|
Preference number: 5 (lower is better) Translates to: TPWALTSAPADSGSG*STGRPRRARKSLSC Trigger: GCAGCTCAGGGACTTCCGGGCCCGTCTTGGCCTCCCGGTGCTCCAGCCACTGCCACTGTCTGCAGGAGCACTAGTCAATGCCCAGGGTGT 66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033490.13 |
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| CDS TCA 90 bp | CTCTTGCAAGGCTCGCTGGCGGTCAAGCAGCCCTCGAAGACGGTCTaGCTTCACCAGTGGGGCAGCCTCTCCAAACAGGGCAGCTGGGGC | + |
|
Preference number: 5 (lower is better) Translates to: LLQGSLAVKQPSKTV*LHQWGSLSKQGSWG Trigger: GCCCCAGCTGCCCTGTTTGGAGAGGCTGCCCCACTGGTGAAGTCAGACCGTCTTCGAGGGCTGCTTGACCGCCAGCGAGCCTTGCAAGAG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000033490.13 |
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| CDS CCA 90 bp | TTCCTCAGCAGGACACAAGGAGTGGTGTGCTGGGTTTGGGTGTGGTaGAGGGTAGGCACGTGCTGCAGGGGGCCTCCGGCGGACCAACTG | + |
|
Preference number: 5 (lower is better) Translates to: FLSRTQGVVCWVWVW*RVGTCCRGPPADQL Trigger: CAGTTGGTCCGCCGGAGGCCCCCTGCAGCACGTGCCTACCCTCCACCACACCCAAACCCAGCACACCACTCCTTGTGTCCTGCTGAGGAA 64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000033490.13 |
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| CDS CCA 90 bp | CAGTTCCTCAGCAGGACACAAGGAGTGGTGTGCTGGGTTTGGGTGTaGTGGAGGGTAGGCACGTGCTGCAGGGGGCCTCCGGCGGACCAA | + |
|
Preference number: 5 (lower is better) Translates to: QFLSRTQGVVCWVWV*WRVGTCCRGPPADQ Trigger: TTGGTCCGCCGGAGGCCCCCTGCAGCACGTGCCTACCCTCCACCACACCCAAACCCAGCACACCACTCCTTGTGTCCTGCTGAGGAACTG 64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000033490.13 |
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| CDS CCA 90 bp | GCACTTCCAGACCCTCCACAGCTTCTGGGGGTAAGCCACTGGGCTTaGAACGGATGGCACGGGTGTTGGGGTCCTTGCTGCGGAGGAGGG | + |
|
Preference number: 5 (lower is better) Translates to: ALPDPPQLLGVSHWA*NGWHGCWGPCCGGG Trigger: CCCTCCTCCGCAGCAAGGACCCCAACACCCGTGCCATCCGTTCCAAGCCCAGTGGCTTACCCCCAGAAGCTGTGGAGGGTCTGGAAGTGC 64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000033490.13 ENSMUST00000224502.2 |
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| CDS CCA 90 bp | TTCCGGATGTACCAGTCCCGCAGCCCCTCCAAGGCAAGGTTCTTGTaGCCACCTCGCTCTCCAGCTGGAGGTATCCGAGTGGGTGGGGGC | + |
|
Preference number: 5 (lower is better) Translates to: FRMYQSRSPSKARFL*PPRSPAGGIRVGGG Trigger: GCCCCCACCCACTCGGATACCTCCAGCTGGAGAGCGAGGTGGCCACAAGAACCTTGCCTTGGAGGGGCTGCGGGACTGGTACATCCGGAA 64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000033490.13 ENSMUST00000224502.2 |
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| CDS-3UTR CAA 90 bp | CAGGCAAGTGTCCCTCAGGACAAAGAGCCACCACATCTCAGGGCTCAGCGAGGTCGGGTGTTGGGGTCCTaGCTGCGGAGGAGGGGGCTG | + |
|
Preference number: 5 (lower is better) Translates to: QASVPQDKEPPHLRAQRGRVLGS*LRRRGL Trigger: CAGCCCCCTCCTCCGCAGCAAGGACCCCAACACCCG...ACCTCGCTGAGCCCTGAGATGTGGTGGCTCTTTGTCCTGAGGGACACTTGCCTG 64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000033490.13 ENSMUST00000224502.2 |
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| CDS GCA 90 bp | AACGGATGGCACGGGTGTTGGGGTCCTTGCTGCGGAGGAGGGGGCTaGTGCCATCAGCTGCATATATGGGTGGAGGACCTGGGAGCATGG | + |
|
Preference number: 5 (lower is better) Translates to: NGWHGCWGPCCGGGG*CHQLHIWVEDLGAW Trigger: CCATGCTCCCAGGTCCTCCACCCATATATGCAGCTGATGGCAGCAGCCCCCTCCTCCGCAGCAAGGACCCCAACACCCGTGCCATCCGTT 63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000033490.13 ENSMUST00000224502.2 |
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| CDS GCA 90 bp | AGCCACTGGGCTTGGAACGGATGGCACGGGTGTTGGGGTCCTTGCTaGGGAGGAGGGGGCTGCTGCCATCAGCTGCATATATGGGTGGAG | + |
|
Preference number: 5 (lower is better) Translates to: SHWAWNGWHGCWGPC*GGGGCCHQLHIWVE Trigger: CTCCACCCATATATGCAGCTGATGGCAGCAGCCCCCTCCTCCGCAGCAAGGACCCCAACACCCGTGCCATCCGTTCCAAGCCCAGTGGCT 63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000033490.13 ENSMUST00000224502.2 |
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| CDS CCA 90 bp | GAGGAGGGGGCTGCTGCCATCAGCTGCATATATGGGTGGAGGACCTaGGAGCATGGCAAGGAGCCCATCTCTGCGGGAAAGGGGTCCTGG | + |
|
Preference number: 5 (lower is better) Translates to: EEGAAAISCIYGWRT*EHGKEPISAGKGSW Trigger: CCAGGACCCCTTTCCCGCAGAGATGGGCTCCTTGCCATGCTCCCAGGTCCTCCACCCATATATGCAGCTGATGGCAGCAGCCCCCTCCTC 63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000033490.13 ENSMUST00000224502.2 |
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| CDS-3UTR CAA 90 bp | AGATCAGGCAAGTGTCCCTCAGGACAAAGAGCCACCACATCTCAGGGCTCAGCGCGGGTGTTGGGGTCCTaGCTGCGGAGGAGGGGGCTG | + |
|
Preference number: 5 (lower is better) Translates to: RSGKCPSGQRATTSQGSARVLGS*LRRRGL Trigger: CAGCCCCCTCCTCCGCAGCAAGGACCCCAACACCCG...CGCTGAGCCCTGAGATGTGGTGGCTCTTTGTCCTGAGGGACACTTGCCTGATCT 63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000033490.13 ENSMUST00000224502.2 |
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| CDS-3UTR CAA 90 bp | GCCACCACATCTCAGGGCTCAGCGAGGTTGACTGTGTGCTCCTCAGACTGGAGTGGAAGGGGGTGTGTGTaGGCCCCACGTGCGGGAGCA | + |
|
Preference number: 5 (lower is better) Translates to: ATTSQGSARLTVCSSDWSGRGCV*APRAGA Trigger: TGCTCCCGCACGTGGGGCCAACACACACCCCCTTCC...ACTCCAGTCTGAGGAGCACACAGTCAACCTCGCTGAGCCCTGAGATGTGGTGGC 63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000033490.13 ENSMUST00000224502.2 |
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| CDS TCA 90 bp | CGATCCGAAGCAGGGTCAGGCCGAGGAAAGCCCATCTGGGAGTCCTaGCTACCGGACCACTGGCGAGAATGGAGGCCTTCCGGTTTGCAG | + |
|
Preference number: 5 (lower is better) Translates to: RSEAGSGRGKPIWES*LPDHWREWRPSGLQ Trigger: CTGCAAACCGGAAGGCCTCCATTCTCGCCAGTGGTCCGGTAGTCAGGACTCCCAGATGGGCTTTCCTCGGCCTGACCCTGCTTCGGATCG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033490.13 |
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| CDS CCA 90 bp | GGCTGCTGCCATCAGCTGCATATATGGGTGGAGGACCTGGGAGCATaGCAAGGAGCCCATCTCTGCGGGAAAGGGGTCCTGGGACCTCAG | + |
|
Preference number: 5 (lower is better) Translates to: GCCHQLHIWVEDLGA*QGAHLCGKGVLGPQ Trigger: CTGAGGTCCCAGGACCCCTTTCCCGCAGAGATGGGCTCCTTGCCATGCTCCCAGGTCCTCCACCCATATATGCAGCTGATGGCAGCAGCC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000033490.13 ENSMUST00000224502.2 |
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| CDS CCA 90 bp | TTGGATGCACTTCCAGACCCTCCACAGCTTCTGGGGGTAAGCCACTaGGCTTGGAACGGATGGCACGGGTGTTGGGGTCCTTGCTGCGGA | + |
|
Preference number: 5 (lower is better) Translates to: LDALPDPPQLLGVSH*AWNGWHGCWGPCCG Trigger: TCCGCAGCAAGGACCCCAACACCCGTGCCATCCGTTCCAAGCCCAGTGGCTTACCCCCAGAAGCTGTGGAGGGTCTGGAAGTGCATCCAA 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000033490.13 ENSMUST00000224502.2 |
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| CDS-3UTR CAA 90 bp | CAAGTGTCCCTCAGGACAAAGAGCCACCACATCTCAGGGCTCAGCGAGGTTGACACTGGTCCCACGCTTTaGGTGGTGAGGGGCGCTCCG | + |
|
Preference number: 5 (lower is better) Translates to: QVSLRTKSHHISGLSEVDTGPTL*VVRGAP Trigger: CGGAGCGCCCCTCACCACCAAAAGCGTGGGACCAGT...GTCAACCTCGCTGAGCCCTGAGATGTGGTGGCTCTTTGTCCTGAGGGACACTTG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033490.13 |
||
| CDS-3UTR CAA 90 bp | TCAGAACTGGAAGACGGCTCCCCCTCTAGCGTCAGGTCACTTAAACGAGCGCTCAGGGCCTCAGAGCTATaGCTGCGGCGGGTACGAGCT | + |
|
Preference number: 5 (lower is better) Translates to: SELEDGSPSSVRSLKRALRASEL*LRRVRA Trigger: AGCTCGTACCCGCCGCAGCAATAGCTCTGAGGCCCT...GAGCGCTCGTTTAAGTGACCTGACGCTAGAGGGGGAGCCGTCTTCCAGTTCTGA 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000033490.13 |
||
| CDS GCA 90 bp | GGAGGTATCCGAGTGGGTGGGGGCATCCAGAGTAATGGATTTGGATaGACTTCCAGACCCTCCACAGCTTCTGGGGGTAAGCCACTGGGC | + |
|
Preference number: 5 (lower is better) Translates to: GGIRVGGGIQSNGFG*TSRPSTASGGKPLG Trigger: GCCCAGTGGCTTACCCCCAGAAGCTGTGGAGGGTCTGGAAGTGCATCCAAATCCATTACTCTGGATGCCCCCACCCACTCGGATACCTCC 59% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000033490.13 ENSMUST00000224502.2 |
||
| CDS-3UTR CAA 90 bp | AGCCACCACATCTCAGGGCTCAGCGAGGTTGACTGTGTGCTCCTCAGACTGGAGAGCACCTCACTGCTCTaGCAAACTGGGGGACCAGCA | + |
|
Preference number: 5 (lower is better) Translates to: SHHISGLSEVDCVLLRLESTSLL*QTGGPA Trigger: TGCTGGTCCCCCAGTTTGCAAGAGCAGTGAGGTGCT...CTCCAGTCTGAGGAGCACACAGTCAACCTCGCTGAGCCCTGAGATGTGGTGGCT 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000033490.13 ENSMUST00000224502.2 |
||
| CDS-3UTR CAA 90 bp | TCAGGACAAAGAGCCACCACATCTCAGGGCTCAGCGAGGTTGACTGTGTGCTCCGAAGGAAGGGACTGGTaGCGGGCGCTCATACAGCAC | + |
|
Preference number: 5 (lower is better) Translates to: SGQRATTSQGSARLTVCSEGRDW*RALIQH Trigger: GTGCTGTATGAGCGCCCGCAACCAGTCCCTTCCTTC...GGAGCACACAGTCAACCTCGCTGAGCCCTGAGATGTGGTGGCTCTTTGTCCTGA 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000033490.13 ENSMUST00000224502.2 |
||
| CDS-3UTR CAA 90 bp | GTATCAGATATCTTCCTGGGCCAAAAAGAAGCCAGGGGTCCTGTGAGATCAGGCCGGATGGCACGGGTGTaGGGGTCCTTGCTGCGGAGG | + |
|
Preference number: 5 (lower is better) Translates to: VSDIFLGQKEARGPVRSGRMARV*GSLLRR Trigger: CCTCCGCAGCAAGGACCCCAACACCCGTGCCATCCG...GCCTGATCTCACAGGACCCCTGGCTTCTTTTTGGCCCAGGAAGATATCTGATAC 59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000033490.13 ENSMUST00000224502.2 |
||
| CDS-3UTR CAA 90 bp | TCAGATATCTTCCTGGGCCAAAAAGAAGCCAGGGGTCCTGTGAGATCAGGCAAGGGAAGGGGGTGTGTGTaGGCCCCACGTGCGGGAGCA | + |
|
Preference number: 5 (lower is better) Translates to: SDIFLGQKEARGPVRSGKGRGCV*APRAGA Trigger: TGCTCCCGCACGTGGGGCCAACACACACCCCCTTCC...CTTGCCTGATCTCACAGGACCCCTGGCTTCTTTTTGGCCCAGGAAGATATCTGA 59% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt. Matches the following 2 transcripts: ENSMUST00000033490.13 ENSMUST00000224502.2 |
||
| CDS TCA 90 bp | GGGGCAGCTGACCAGTTAGCTCCGCCTCCTGCAGACACACTTTCCTaGGCTCTTGAAGTTTTACGCTCAGGGCCTCTTGCAAGGCTCGCT | + |
|
Preference number: 5 (lower is better) Translates to: GAADQLAPPPADTLS*ALEVLRSGPLARLA Trigger: AGCGAGCCTTGCAAGAGGCCCTGAGCGTAAAACTTCAAGAGCTCAGGAAAGTGTGTCTGCAGGAGGCGGAGCTAACTGGTCAGCTGCCCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000033490.13 |
||
| CDS CCA 90 bp | GCTCCGTTAGAGGGAAGCAGCTATGAGGCTCCTCGTTATCATGGCTaGCCCCTGACTCTGAGAGGGAGCTGCTCTCCGAGTGCAGAACTA | + |
|
Preference number: 5 (lower is better) Translates to: APLEGSSYEAPRYHG*PLTLRGSCSPSAEL Trigger: TAGTTCTGCACTCGGAGAGCAGCTCCCTCTCAGAGTCAGGGGCCAGCCATGATAACGAGGAGCCTCATAGCTGCTTCCCTCTAACGGAGC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033490.13 |
||
| CDS-3UTR CAA 90 bp | GCCACCACATCTCAGGGCTCAGCGAGGTTGACTGTGTGCTCCTCAGACTGGAGTCAGAACTACATCCTCTaGGCTGAGCTGAGCAAGGCG | + |
|
Preference number: 5 (lower is better) Translates to: ATTSQGSARLTVCSSDWSQNYIL*AELSKA Trigger: CGCCTTGCTCAGCTCAGCCAAGAGGATGTAGTTCTG...ACTCCAGTCTGAGGAGCACACAGTCAACCTCGCTGAGCCCTGAGATGTGGTGGC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033490.13 |
||
| CDS-3UTR CAA 90 bp | TCAGGACAAAGAGCCACCACATCTCAGGGCTCAGCGAGGTTGACTGTGTGCTCCTCCAAGGCAAGGTTCTaGTGGCCACCTCGCTCTCCA | + |
|
Preference number: 5 (lower is better) Translates to: SGQRATTSQGSARLTVCSSKARF*WPPRSP Trigger: TGGAGAGCGAGGTGGCCACAAGAACCTTGCCTTGGA...GGAGCACACAGTCAACCTCGCTGAGCCCTGAGATGTGGTGGCTCTTTGTCCTGA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000033490.13 ENSMUST00000224502.2 |
||
| CDS CCA 90 bp | CAAGGTTCTTGTGGCCACCTCGCTCTCCAGCTGGAGGTATCCGAGTaGGTGGGGGCATCCAGAGTAATGGATTTGGATGCACTTCCAGAC | + |
|
Preference number: 5 (lower is better) Translates to: QGSCGHLALQLEVSE*VGASRVMDLDALPD Trigger: GTCTGGAAGTGCATCCAAATCCATTACTCTGGATGCCCCCACCCACTCGGATACCTCCAGCTGGAGAGCGAGGTGGCCACAAGAACCTTG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000033490.13 ENSMUST00000224502.2 |
||
| CDS-3UTR CAA 90 bp | AGTATCAGATATCTTCCTGGGCCAAAAAGAAGCCAGGGGTCCTGTGAGATCAGGGGGCTGGCCACAGAGTaGCGTCGGCTCTTCAGGTCC | + |
|
Preference number: 5 (lower is better) Translates to: SIRYLPGPKRSQGSCEIRGLATE*RRLFRS Trigger: GGACCTGAAGAGCCGACGCAACTCTGTGGCCAGCCC...CCTGATCTCACAGGACCCCTGGCTTCTTTTTGGCCCAGGAAGATATCTGATACT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000033490.13 |
||
| CDS-3UTR CAA 90 bp | CAGGCAAGTGTCCCTCAGGACAAAGAGCCACCACATCTCAGGGCTCAGCGAGGTTCCAGAGTAATGGATTaGGATGCACTTCCAGACCCT | + |
|
Preference number: 5 (lower is better) Translates to: QASVPQDKEPPHLRAQRGSRVMD*DALPDP Trigger: AGGGTCTGGAAGTGCATCCAAATCCATTACTCTGGA...ACCTCGCTGAGCCCTGAGATGTGGTGGCTCTTTGTCCTGAGGGACACTTGCCTG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000033490.13 ENSMUST00000224502.2 |
||
| CDS-3UTR CAA 90 bp | GAGAATAGAAAACCCCTTCTAAAGCTTGGGAAAGAACTGCTACCAACACCCAAGTACGCTCAGGGCCTCTaGCAAGGCTCGCTGGCGGTC | + |
|
Preference number: 5 (lower is better) Translates to: ENRKPLLKLGKELLPTPKYAQGL*QGSLAV Trigger: GACCGCCAGCGAGCCTTGCAAGAGGCCCTGAGCGTA...CTTGGGTGTTGGTAGCAGTTCTTTCCCAAGCTTTAGAAGGGGTTTTCTATTCTC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000033490.13 |
||
| CDS-3UTR CAA 90 bp | AAGTGTCCCTCAGGACAAAGAGCCACCACATCTCAGGGCTCAGCGAGGTTGACTCACTTTCCTGAGCTCTaGAAGTTTTACGCTCAGGGC | + |
|
Preference number: 5 (lower is better) Translates to: KCPSGQRATTSQGSARLTHFPEL*KFYAQG Trigger: GCCCTGAGCGTAAAACTTCAAGAGCTCAGGAAAGTG...AGTCAACCTCGCTGAGCCCTGAGATGTGGTGGCTCTTTGTCCTGAGGGACACTT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033490.13 |
||
| CDS-3UTR CAA 90 bp | GGAGTATCAGATATCTTCCTGGGCCAAAAAGAAGCCAGGGGTCCTGTGAGATCAAGCACCTCACTGCTCTaGCAAACTGGGGGACCAGCA | + |
|
Preference number: 5 (lower is better) Translates to: GVSDIFLGQKEARGPVRSSTSLL*QTGGPA Trigger: TGCTGGTCCCCCAGTTTGCAAGAGCAGTGAGGTGCT...TGATCTCACAGGACCCCTGGCTTCTTTTTGGCCCAGGAAGATATCTGATACTCC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 2 transcripts: ENSMUST00000033490.13 ENSMUST00000224502.2 |
||
| CDS-3UTR CAA 90 bp | ACAGAGCTCCTTCAGGTACCCCCACTTAGACTTCCATCCTTCCAAATGTGGACATCCAAGGCAAGGTTCTaGTGGCCACCTCGCTCTCCA | + |
|
Preference number: 5 (lower is better) Translates to: TELLQVPPLRLPSFQMWTSKARF*WPPRSP Trigger: TGGAGAGCGAGGTGGCCACAAGAACCTTGCCTTGGA...TGTCCACATTTGGAAGGATGGAAGTCTAAGTGGGGGTACCTGAAGGAGCTCTGT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000033490.13 |
||
| CDS-3UTR CAA 90 bp | GCTCACAGTTTCCCTTTTATAAAACACCTAGTGTTGGGCAATGACAGAGTACTATGGAGGCCTTCCGGTTaGCAGAGCCGGGGGCCACTG | + |
|
Preference number: 5 (lower is better) Translates to: AHSFPFIKHLVLGNDRVLWRPSG*QSRGPL Trigger: CAGTGGCCCCCGGCTCTGCAAACCGGAAGGCCTCCA...TAGTACTCTGTCATTGCCCAACACTAGGTGTTTTATAAAAGGGAAACTGTGAGC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000033490.13 |
||
| CDS-3UTR CAA 90 bp | GCTCACAGTTTCCCTTTTATAAAACACCTAGTGTTGGGCAATGACAGAGTACTACGGATGGCACGGGTGTaGGGGTCCTTGCTGCGGAGG | + |
|
Preference number: 5 (lower is better) Translates to: AHSFPFIKHLVLGNDRVLRMARV*GSLLRR Trigger: CCTCCGCAGCAAGGACCCCAACACCCGTGCCATCCG...TAGTACTCTGTCATTGCCCAACACTAGGTGTTTTATAAAAGGGAAACTGTGAGC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000033490.13 |
||
| CDS-3UTR CAA 90 bp | GCCCATCTGCTCAAAGACTCTAGCGGGAGGAAGCAGGGAATTCTGTTCCCAGCATCCAGAGTAATGGATTaGGATGCACTTCCAGACCCT | + |
|
Preference number: 5 (lower is better) Translates to: AHLLKDSSGRKQGILFPASRVMD*DALPDP Trigger: AGGGTCTGGAAGTGCATCCAAATCCATTACTCTGGA...TGCTGGGAACAGAATTCCCTGCTTCCTCCCGCTAGAGTCTTTGAGCAGATGGGC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033490.13 |
||
| CDS-3UTR CAA 90 bp | AGGATGCAACATACTCAAATGGCTCTGTTTCTTGACAACCTCTTGTACGGCCTTGAAGGAAGGGACTGGTaGCGGGCGCTCATACAGCAC | + |
|
Preference number: 5 (lower is better) Translates to: RMQHTQMALFLDNLLYGLEGRDW*RALIQH Trigger: GTGCTGTATGAGCGCCCGCAACCAGTCCCTTCCTTC...AAGGCCGTACAAGAGGTTGTCAAGAAACAGAGCCATTTGAGTATGTTGCATCCT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033490.13 |
||
| CDS GCA 72 bp | CAGCTGCGCGGTCCACCAGCAGGGCCTCAGAGCTATTaGTGCGGCGGGTACGAGCTGCGAAGAGGGAGGCCC | + |
|
Preference number: 6 (lower is better) Translates to: QLRGPPAGPQSY*CGGYELRRGRP Trigger: GGGCCTCCCTCTTCGCAGCTCGTACCCGCCGCAGCAATAGCTCTGAGGCCCTGCTGGTGGACCGCGCAGCTG 69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033490.13 |
||
| CDS GCA 72 bp | CAGCGGGGCAGGTGGAGATCCAGCTCCGCCAGCAGCTaGGCGGTCCACCAGCAGGGCCTCAGAGCTATTGCT | + |
|
Preference number: 6 (lower is better) Translates to: QRGRWRSSSASS*AVHQQGLRAIA Trigger: AGCAATAGCTCTGAGGCCCTGCTGGTGGACCGCGCAGCTGCTGGCGGAGCTGGATCTCCACCTGCCCCGCTG 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033490.13 |
||
| CDS CCA 72 bp | CTCATAGCAGCGGGCATGGAGGAAGGGGGTGTGTGTTaGCCCCACGTGCGGGAGCATTGGCCTGCGCTGGGG | + |
|
Preference number: 6 (lower is better) Translates to: LIAAGMEEGGVC*PHVREHWPALG Trigger: CCCCAGCGCAGGCCAATGCTCCCGCACGTGGGGCCAACACACACCCCCTTCCTCCATGCCCGCTGCTATGAG 68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000033490.13 ENSMUST00000224502.2 |
||
| CDS GCA 72 bp | CAGGGCCTCAGAGCTATTGCTGCGGCGGGTACGAGCTaGGAAGAGGGAGGCCCGATCCGAAGCAGGGTCAGG | + |
|
Preference number: 6 (lower is better) Translates to: QGLRAIAAAGTS*EEGGPIRSRVR Trigger: CCTGACCCTGCTTCGGATCGGGCCTCCCTCTTCGCAGCTCGTACCCGCCGCAGCAATAGCTCTGAGGCCCTG 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033490.13 |
||
| CDS GCA 72 bp | CACGTGCGGGAGCATTGGCCTGCGCTGGGGACCAACTaGCAGTCCCGAGTTCCGGATGTACCAGTCCCGCAG | + |
|
Preference number: 6 (lower is better) Translates to: HVREHWPALGTN*QSRVPDVPVPQ Trigger: CTGCGGGACTGGTACATCCGGAACTCGGGACTGGCAGTTGGTCCCCAGCGCAGGCCAATGCTCCCGCACGTG 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000033490.13 ENSMUST00000224502.2 |
||
| CDS TCA 72 bp | GGCTCGCTGGCGGTCAAGCAGCCCTCGAAGACGGTCTaGCTTCACCAGTGGGGCAGCCTCTCCAAACAGGGC | + |
|
Preference number: 6 (lower is better) Translates to: GSLAVKQPSKTV*LHQWGSLSKQG Trigger: GCCCTGTTTGGAGAGGCTGCCCCACTGGTGAAGTCAGACCGTCTTCGAGGGCTGCTTGACCGCCAGCGAGCC 65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033490.13 |
||
| CDS GCA 72 bp | ACCGGGAGGCCAAGACGGGCCCGGAAGTCCCTGAGCTaGTCCTCCAGCTCGTGCAGCCTTCGAAGTGCATCA | + |
|
Preference number: 6 (lower is better) Translates to: TGRPRRARKSLS*SSSSCSLRSAS Trigger: TGATGCACTTCGAAGGCTGCACGAGCTGGAGGAGCAGCTCAGGGACTTCCGGGCCCGTCTTGGCCTCCCGGT 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033490.13 |
||
| CDS CCA 72 bp | GCATTGACTAGTGCTCCTGCAGACAGTGGCAGTGGCTaGAGCACCGGGAGGCCAAGACGGGCCCGGAAGTCC | + |
|
Preference number: 6 (lower is better) Translates to: ALTSAPADSGSG*STGRPRRARKS Trigger: GGACTTCCGGGCCCGTCTTGGCCTCCCGGTGCTCCAGCCACTGCCACTGTCTGCAGGAGCACTAGTCAATGC 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033490.13 |
||
| CDS CCA 72 bp | CAGCTTCTGGGGGTAAGCCACTGGGCTTGGAACGGATaGCACGGGTGTTGGGGTCCTTGCTGCGGAGGAGGG | + |
|
Preference number: 6 (lower is better) Translates to: QLLGVSHWAWNG*HGCWGPCCGGG Trigger: CCCTCCTCCGCAGCAAGGACCCCAACACCCGTGCCATCCGTTCCAAGCCCAGTGGCTTACCCCCAGAAGCTG 65% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000033490.13 ENSMUST00000224502.2 |
||
| CDS CCA 72 bp | TGTGTTGGCCCCACGTGCGGGAGCATTGGCCTGCGCTaGGGACCAACTGCCAGTCCCGAGTTCCGGATGTAC | + |
|
Preference number: 6 (lower is better) Translates to: CVGPTCGSIGLR*GPTASPEFRMY Trigger: GTACATCCGGAACTCGGGACTGGCAGTTGGTCCCCAGCGCAGGCCAATGCTCCCGCACGTGGGGCCAACACA 65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000033490.13 ENSMUST00000224502.2 |
||
| CDS TCA 72 bp | GCAGGGTCAGGCCGAGGAAAGCCCATCTGGGAGTCCTaGCTACCGGACCACTGGCGAGAATGGAGGCCTTCC | + |
|
Preference number: 6 (lower is better) Translates to: AGSGRGKPIWES*LPDHWREWRPS Trigger: GGAAGGCCTCCATTCTCGCCAGTGGTCCGGTAGTCAGGACTCCCAGATGGGCTTTCCTCGGCCTGACCCTGC 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033490.13 |
||
| CDS GCA 72 bp | CACGGGTGTTGGGGTCCTTGCTGCGGAGGAGGGGGCTaGTGCCATCAGCTGCATATATGGGTGGAGGACCTG | + |
|
Preference number: 6 (lower is better) Translates to: HGCWGPCCGGGG*CHQLHIWVEDL Trigger: CAGGTCCTCCACCCATATATGCAGCTGATGGCAGCAGCCCCCTCCTCCGCAGCAAGGACCCCAACACCCGTG 64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000033490.13 ENSMUST00000224502.2 |
||
| CDS CAA 72 bp | ACTGGTTGCGGGCGCTCATACAGCACCTCACTGCTCTaGCAAACTGGGGGACCAGCAGCAGGGGGAGCCAGC | + |
|
Preference number: 6 (lower is better) Translates to: TGCGRSYSTSLL*QTGGPAAGGAS Trigger: GCTGGCTCCCCCTGCTGCTGGTCCCCCAGTTTGCAAGAGCAGTGAGGTGCTGTATGAGCGCCCGCAACCAGT 64% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000033490.13 |
||
| CDS CAA 90 bp | TGCACTTCCAGACCCTCCACAGCTTCTGGGGGTAAGCCACTGGGCTaGGAACGGATGGCACGGGTGTTGGGGTCCTTGCTGCGGAGGAGG | + |
|
Preference number: 6 (lower is better) Translates to: CTSRPSTASGGKPLG*ERMARVLGSLLRRR Trigger: CCTCCTCCGCAGCAAGGACCCCAACACCCGTGCCATCCGTTCCAAGCCCAGTGGCTTACCCCCAGAAGCTGTGGAGGGTCTGGAAGTGCA 63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000033490.13 ENSMUST00000224502.2 |
||
| CDS CAA 90 bp | GAGTTCCGGATGTACCAGTCCCGCAGCCCCTCCAAGGCAAGGTTCTaGTGGCCACCTCGCTCTCCAGCTGGAGGTATCCGAGTGGGTGGG | + |
|
Preference number: 6 (lower is better) Translates to: EFRMYQSRSPSKARF*WPPRSPAGGIRVGG Trigger: CCCACCCACTCGGATACCTCCAGCTGGAGAGCGAGGTGGCCACAAGAACCTTGCCTTGGAGGGGCTGCGGGACTGGTACATCCGGAACTC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000033490.13 ENSMUST00000224502.2 |
||
| CDS CCA 72 bp | TGCGGAGGAGGGGGCTGCTGCCATCAGCTGCATATATaGGTGGAGGACCTGGGAGCATGGCAAGGAGCCCAT | + |
|
Preference number: 6 (lower is better) Translates to: CGGGGCCHQLHI*VEDLGAWQGAH Trigger: ATGGGCTCCTTGCCATGCTCCCAGGTCCTCCACCCATATATGCAGCTGATGGCAGCAGCCCCCTCCTCCGCA 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000033490.13 ENSMUST00000224502.2 |
||
| CDS CCA 72 bp | CTTCCAGACCCTCCACAGCTTCTGGGGGTAAGCCACTaGGCTTGGAACGGATGGCACGGGTGTTGGGGTCCT | + |
|
Preference number: 6 (lower is better) Translates to: LPDPPQLLGVSH*AWNGWHGCWGP Trigger: AGGACCCCAACACCCGTGCCATCCGTTCCAAGCCCAGTGGCTTACCCCCAGAAGCTGTGGAGGGTCTGGAAG 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000033490.13 ENSMUST00000224502.2 |
||
| CDS CCA 72 bp | TACCAGTCCCGCAGCCCCTCCAAGGCAAGGTTCTTGTaGCCACCTCGCTCTCCAGCTGGAGGTATCCGAGTG | + |
|
Preference number: 6 (lower is better) Translates to: YQSRSPSKARFL*PPRSPAGGIRV Trigger: CACTCGGATACCTCCAGCTGGAGAGCGAGGTGGCCACAAGAACCTTGCCTTGGAGGGGCTGCGGGACTGGTA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000033490.13 ENSMUST00000224502.2 |
||
| CDS CCA 72 bp | TGCCCCGCCACTACCGCGGGGCAAGCCTCGGTCCAATaGATAGTCCAAGAGGAAGTCTCCACACACAGTTGG | + |
|
Preference number: 6 (lower is better) Translates to: CPATTAGQASVQ*IVQEEVSTHSW Trigger: CCAACTGTGTGTGGAGACTTCCTCTTGGACTATCCATTGGACCGAGGCTTGCCCCGCGGTAGTGGCGGGGCA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000033490.13 ENSMUST00000224502.2 |
||
| CDS CAA 72 bp | ATGTACCAGTCCCGCAGCCCCTCCAAGGCAAGGTTCTaGTGGCCACCTCGCTCTCCAGCTGGAGGTATCCGA | + |
|
Preference number: 6 (lower is better) Translates to: MYQSRSPSKARF*WPPRSPAGGIR Trigger: TCGGATACCTCCAGCTGGAGAGCGAGGTGGCCACAAGAACCTTGCCTTGGAGGGGCTGCGGGACTGGTACAT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000033490.13 ENSMUST00000224502.2 |
||
| CDS GCA 72 bp | GGGCCAGTGGTACGGGAAGAGAAGGAAGGGACTGGTTaGGGGCGCTCATACAGCACCTCACTGCTCTTGCAA | + |
|
Preference number: 6 (lower is better) Translates to: GPVVREEKEGTG*GRSYSTSLLLQ Trigger: TTGCAAGAGCAGTGAGGTGCTGTATGAGCGCCCGCAACCAGTCCCTTCCTTCTCTTCCCGTACCACTGGCCC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000033490.13 ENSMUST00000224502.2 |
||
| CDS CCA 72 bp | GAGGGAAGCAGCTATGAGGCTCCTCGTTATCATGGCTaGCCCCTGACTCTGAGAGGGAGCTGCTCTCCGAGT | + |
|
Preference number: 6 (lower is better) Translates to: EGSSYEAPRYHG*PLTLRGSCSPS Trigger: ACTCGGAGAGCAGCTCCCTCTCAGAGTCAGGGGCCAGCCATGATAACGAGGAGCCTCATAGCTGCTTCCCTC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033490.13 |
||
| CDS CCA 72 bp | GCTGCTGCCATCAGCTGCATATATGGGTGGAGGACCTaGGAGCATGGCAAGGAGCCCATCTCTGCGGGAAAG | + |
|
Preference number: 6 (lower is better) Translates to: AAAISCIYGWRT*EHGKEPISAGK Trigger: CTTTCCCGCAGAGATGGGCTCCTTGCCATGCTCCCAGGTCCTCCACCCATATATGCAGCTGATGGCAGCAGC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000033490.13 ENSMUST00000224502.2 |
||
| CDS CCA 72 bp | TGTGGCCACCTCGCTCTCCAGCTGGAGGTATCCGAGTaGGTGGGGGCATCCAGAGTAATGGATTTGGATGCA | + |
|
Preference number: 6 (lower is better) Translates to: CGHLALQLEVSE*VGASRVMDLDA Trigger: TGCATCCAAATCCATTACTCTGGATGCCCCCACCCACTCGGATACCTCCAGCTGGAGAGCGAGGTGGCCACA 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000033490.13 ENSMUST00000224502.2 |
||
| CDS TCA 72 bp | AGCTCCGCCTCCTGCAGACACACTTTCCTGAGCTCTTaGAGTTTTACGCTCAGGGCCTCTTGCAAGGCTCGC | + |
|
Preference number: 6 (lower is better) Translates to: SSASCRHTFLSS*SFTLRASCKAR Trigger: GCGAGCCTTGCAAGAGGCCCTGAGCGTAAAACTTCAAGAGCTCAGGAAAGTGTGTCTGCAGGAGGCGGAGCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033490.13 |
||
| CDS GCA 72 bp | CGAGTGGGTGGGGGCATCCAGAGTAATGGATTTGGATaGACTTCCAGACCCTCCACAGCTTCTGGGGGTAAG | + |
|
Preference number: 6 (lower is better) Translates to: RVGGGIQSNGFG*TSRPSTASGGK Trigger: CTTACCCCCAGAAGCTGTGGAGGGTCTGGAAGTGCATCCAAATCCATTACTCTGGATGCCCCCACCCACTCG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000033490.13 ENSMUST00000224502.2 |
||
| CDS CAA 72 bp | TTTCCTGAGCTCTTGAAGTTTTACGCTCAGGGCCTCTaGCAAGGCTCGCTGGCGGTCAAGCAGCCCTCGAAG | + |
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Preference number: 6 (lower is better) Translates to: FPELLKFYAQGL*QGSLAVKQPSK Trigger: CTTCGAGGGCTGCTTGACCGCCAGCGAGCCTTGCAAGAGGCCCTGAGCGTAAAACTTCAAGAGCTCAGGAAA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033490.13 |
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| CDS CAA 72 bp | GTATCCGAGTGGGTGGGGGCATCCAGAGTAATGGATTaGGATGCACTTCCAGACCCTCCACAGCTTCTGGGG | + |
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Preference number: 6 (lower is better) Translates to: VSEWVGASRVMD*DALPDPPQLLG Trigger: CCCCAGAAGCTGTGGAGGGTCTGGAAGTGCATCCAAATCCATTACTCTGGATGCCCCCACCCACTCGGATAC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000033490.13 ENSMUST00000224502.2 |
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