Pregenerated sensors for CCDC106 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000035228Ensembl transcript IDs: ENSMUST00000045543.8, ENSMUST00000108571.9, ENSMUST00000207974.2, ENSMUST00000208042.2, ENSMUST00000208161.2, ENSMUST00000208728.2
Found 120 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | GCGATGGGCGTGGTCAGCGCCACGGTGTTCCTGTCCACACGGTGGTaGTCGAAGGCTCTGGACATGCTCTTCAGCTTCTGGAAGGTGCCC | + |
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Preference number: 1 (lower is better) Translates to: AMGVVSATVFLSTRW*SKALDMLFSFWKVP Trigger: GGGCACCTTCCAGAAGCTGAAGAGCATGTCCAGAGCCTTCGAGCACCACCGTGTGGACAGGAACACCGTGGCGCTGACCACGCCCATCGC 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000207974.2 |
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| 3UTR CCA 90 bp | TCTGCGATGGGCGTGGTCAGCGCCACGGTGTTCCTGTCCACACGGTaGTGCTCGAAGGCTCTGGACATGCTCTTCAGCTTCTGGAAGGTG | + |
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Preference number: 1 (lower is better) Translates to: SAMGVVSATVFLSTR*CSKALDMLFSFWKV Trigger: CACCTTCCAGAAGCTGAAGAGCATGTCCAGAGCCTTCGAGCACCACCGTGTGGACAGGAACACCGTGGCGCTGACCACGCCCATCGCAGA 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000207974.2 |
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| 3UTR TCA 90 bp | ATGGATCGAACTCTCCCACCTCAGCCAGCTTTTCGGGAGCCACAATaGGTAGCTCTGCGATGGGCGTGGTCAGCGCCACGGTGTTCCTGT | + |
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Preference number: 1 (lower is better) Translates to: MDRTLPPQPAFREPQ*VALRWAWSAPRCSC Trigger: ACAGGAACACCGTGGCGCTGACCACGCCCATCGCAGAGCTACTCATTGTGGCTCCCGAAAAGCTGGCTGAGGTGGGAGAGTTCGATCCAT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000207974.2 |
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| 3UTR GCA 90 bp | CCACGGTGTTCCTGTCCACACGGTGGTGCTCGAAGGCTCTGGACATaGTCTTCAGCTTCTGGAAGGTGCCCAGGATCTTCTTGTAGCGGC | + |
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Preference number: 1 (lower is better) Translates to: PRCSCPHGGARRLWT*SSASGRCPGSSCSG Trigger: GCCGCTACAAGAAGATCCTGGGCACCTTCCAGAAGCTGAAGAGCATGTCCAGAGCCTTCGAGCACCACCGTGTGGACAGGAACACCGTGG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000207974.2 |
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| 3UTR GCA 90 bp | GGTGGTGCTCGAAGGCTCTGGACATGCTCTTCAGCTTCTGGAAGGTaGCCAGGATCTTCTTGTAGCGGCAGAGGACCCCATCAGCATCCT | + |
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Preference number: 1 (lower is better) Translates to: GGARRLWTCSSASGR*PGSSCSGRGPHQHP Trigger: AGGATGCTGATGGGGTCCTCTGCCGCTACAAGAAGATCCTGGGCACCTTCCAGAAGCTGAAGAGCATGTCCAGAGCCTTCGAGCACCACC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000207974.2 |
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| 3UTR CCA 90 bp | CAGAATAATACTCTGTCTTTGCATGGGATGCAGATGGGCTACTCCTaGCTAAGGAGGCCTAGCTGGCAGCCCCTGCGGGGTGAAATGGAG | + |
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Preference number: 1 (lower is better) Translates to: QNNTLSLHGMQMGYS*LRRPSWQPLRGEME Trigger: CTCCATTTCACCCCGCAGGGGCTGCCAGCTAGGCCTCCTTAGCCAGGAGTAGCCCATCTGCATCCCATGCAAAGACAGAGTATTATTCTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000045543.8 ENSMUST00000108571.9 ENSMUST00000207974.2 |
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| 3UTR GCA 90 bp | CAGGATCTTCTTGTAGCGGCAGAGGACCCCATCAGCATCCTTCACTaGAGGACCAAGAGGACAGAAAGAGGAGGACTGGAAAAGACACTC | + |
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Preference number: 1 (lower is better) Translates to: QDLLVAAEDPISILH*RTKRTERGGLEKTL Trigger: GAGTGTCTTTTCCAGTCCTCCTCTTTCTGTCCTCTTGGTCCTGCAGTGAAGGATGCTGATGGGGTCCTCTGCCGCTACAAGAAGATCCTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000207974.2 |
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| 3UTR TCA 90 bp | GATGGAAAACAGTTAAGACCTGAGCAAGAAGTAGACCAGGGAAATTaGAGGCAGGCCTGGACACCAGAAGAAAGGAGATGGGCCCAGAGA | + |
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Preference number: 1 (lower is better) Translates to: DGKQLRPEQEVDQGN*RQAWTPEERRWAQR Trigger: TCTCTGGGCCCATCTCCTTTCTTCTGGTGTCCAGGCCTGCCTTCAATTTCCCTGGTCTACTTCTTGCTCAGGTCTTAACTGTTTTCCATC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000207974.2 |
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| 3UTR-3UTR TCA 90 bp | GGGGAGGCGTGCGGGGCGGCGGCATCACCGCTTGAAGCGGTAGGTGATGGGCAGGTAGACCAGGGAAATTaGAGGCAGGCCTGGACACCA | + |
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Preference number: 2 (lower is better) Translates to: GEACGAAASPLEAVGDGQVDQGN*RQAWTP Trigger: TGGTGTCCAGGCCTGCCTTCAATTTCCCTGGTCTAC...CTGCCCATCACCTACCGCTTCAAGCGGTGATGCCGCCGCCCCGCACGCCTCCCC 66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000207974.2 |
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| 3UTR-3UTR TCA 90 bp | GAGGCGTGCGGGGCGGCGGCATCACCGCTTGAAGCGGTAGGTGATGGGCAGGAGGAGCCTGCACCTTCTTaGGAGTCTCGTCGTCCAGTG | + |
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Preference number: 2 (lower is better) Translates to: EACGAAASPLEAVGDGQEEPAPS*ESRRPV Trigger: CACTGGACGACGAGACTCTCAAGAAGGTGCAGGCTC...CTCCTGCCCATCACCTACCGCTTCAAGCGGTGATGCCGCCGCCCCGCACGCCTC 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000207974.2 |
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| 3UTR-3UTR GCA 90 bp | GGGGAGGCGTGCGGGGCGGCGGCATCACCGCTTGAAGCGGTAGGTGATGGGCAGCGAAGGCTCTGGACATaGTCTTCAGCTTCTGGAAGG | + |
|
Preference number: 2 (lower is better) Translates to: GEACGAAASPLEAVGDGQRRLWT*SSASGR Trigger: CCTTCCAGAAGCTGAAGAGCATGTCCAGAGCCTTCG...CTGCCCATCACCTACCGCTTCAAGCGGTGATGCCGCCGCCCCGCACGCCTCCCC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000207974.2 |
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| 3UTR-3UTR TCA 90 bp | GGGGAGGCGTGCGGGGCGGCGGCATCACCGCTTGAAGCGGTAGGTGATGGGCAGGACCGAAAAGGGCTGTaGGATGAAGTTGAGTCTGAT | + |
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Preference number: 2 (lower is better) Translates to: GEACGAAASPLEAVGDGQDRKGL*DEVESD Trigger: ATCAGACTCAACTTCATCTCACAGCCCTTTTCGGTC...CTGCCCATCACCTACCGCTTCAAGCGGTGATGCCGCCGCCCCGCACGCCTCCCC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000207974.2 |
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| 3UTR-3UTR GCA 90 bp | GGCGCTCCTTGGATGGATCGAACTCTCCCACCTCAGCCAGCTTTTCGGGAGCCACTAGCTGGCAGCCCCTaGGGGGTGAAATGGAGACGG | + |
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Preference number: 2 (lower is better) Translates to: GAPWMDRTLPPQPAFREPLAGSP*GVKWRR Trigger: CCGTCTCCATTTCACCCCGCAGGGGCTGCCAGCTAG...TGGCTCCCGAAAAGCTGGCTGAGGTGGGAGAGTTCGATCCATCCAAGGAGCGCC 62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000207974.2 |
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| 3UTR CAA 90 bp | TCCAGTGCCAGGAAGCAGCGGCGGGAATACTCTAGCAGGCGCTCCTaGGATGGATCGAACTCTCCCACCTCAGCCAGCTTTTCGGGAGCC | + |
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Preference number: 2 (lower is better) Translates to: SSARKQRREYSSRRS*DGSNSPTSASFSGA Trigger: GGCTCCCGAAAAGCTGGCTGAGGTGGGAGAGTTCGATCCATCCAAGGAGCGCCTGCTAGAGTATTCCCGCCGCTGCTTCCTGGCACTGGA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000207974.2 |
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| 3UTR-3UTR GCA 90 bp | GAGGCGTGCGGGGCGGCGGCATCACCGCTTGAAGCGGTAGGTGATGGGCAGGAGATCAGCATCCTTCACTaGAGGACCAAGAGGACAGAA | + |
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Preference number: 2 (lower is better) Translates to: EACGAAASPLEAVGDGQEISILH*RTKRTE Trigger: TTCTGTCCTCTTGGTCCTGCAGTGAAGGATGCTGAT...CTCCTGCCCATCACCTACCGCTTCAAGCGGTGATGCCGCCGCCCCGCACGCCTC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000207974.2 |
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| 3UTR-3UTR CCA 90 bp | GTAGGTGATGGGCAGGAGCAGCTTGCTCTTCTTGAGAGCCTGCACCTTCTTGAGGCTCTGCGATGGGCGTaGTCAGCGCCACGGTGTTCC | + |
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Preference number: 2 (lower is better) Translates to: VGDGQEQLALLESLHLLEALRWA*SAPRCS Trigger: GGAACACCGTGGCGCTGACCACGCCCATCGCAGAGC...CTCAAGAAGGTGCAGGCTCTCAAGAAGAGCAAGCTGCTCCTGCCCATCACCTAC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000207974.2 |
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| 3UTR-3UTR CCA 90 bp | CGCTCCTTGGATGGATCGAACTCTCCCACCTCAGCCAGCTTTTCGGGAGCCACATTCCTGTCCACACGGTaGTGCTCGAAGGCTCTGGAC | + |
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Preference number: 2 (lower is better) Translates to: RSLDGSNSPTSASFSGATFLSTR*CSKALD Trigger: GTCCAGAGCCTTCGAGCACCACCGTGTGGACAGGAA...TGTGGCTCCCGAAAAGCTGGCTGAGGTGGGAGAGTTCGATCCATCCAAGGAGCG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000207974.2 |
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| 3UTR-3UTR CCA 90 bp | GCCACGGTGTTCCTGTCCACACGGTGGTGCTCGAAGGCTCTGGACATGCTCTTCCCAGAAGAAAGGAGATaGGCCCAGAGACCTCCTTTC | + |
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Preference number: 2 (lower is better) Translates to: ATVFLSTRWCSKALDMLFPEERR*AQRPPF Trigger: GAAAGGAGGTCTCTGGGCCCATCTCCTTTCTTCTGG...GAAGAGCATGTCCAGAGCCTTCGAGCACCACCGTGTGGACAGGAACACCGTGGC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000207974.2 |
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| 3UTR-3UTR CCA 90 bp | ATGGGCGTGGTCAGCGCCACGGTGTTCCTGTCCACACGGTGGTGCTCGAAGGCTGCAAGCAAGAAATCATaGAAGTGGGGACACATGAGG | + |
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Preference number: 2 (lower is better) Translates to: MGVVSATVFLSTRWCSKAASKKS*KWGHMR Trigger: CCTCATGTGTCCCCACTTCCATGATTTCTTGCTTGC...AGCCTTCGAGCACCACCGTGTGGACAGGAACACCGTGGCGCTGACCACGCCCAT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000207974.2 |
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| 3UTR-3UTR TCA 90 bp | TCTTCAGCTTCTGGAAGGTGCCCAGGATCTTCTTGTAGCGGCAGAGGACCCCATTGGAAAAGACACTCATaGGGGAAGGAGACATGGGGG | + |
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Preference number: 2 (lower is better) Translates to: SSASGRCPGSSCSGRGPHWKRHS*GKETWG Trigger: CCCCCATGTCTCCTTCCCTCATGAGTGTCTTTTCCA...ATGGGGTCCTCTGCCGCTACAAGAAGATCCTGGGCACCTTCCAGAAGCTGAAGA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000207974.2 |
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| 3UTR-3UTR CCA 90 bp | CCACGGTGTTCCTGTCCACACGGTGGTGCTCGAAGGCTCTGGACATGCTCTTCATACTCTGTCTTTGCATaGGATGCAGATGGGCTACTC | + |
|
Preference number: 2 (lower is better) Translates to: PRCSCPHGGARRLWTCSSYSVFA*DADGLL Trigger: GAGTAGCCCATCTGCATCCCATGCAAAGACAGAGTA...TGAAGAGCATGTCCAGAGCCTTCGAGCACCACCGTGTGGACAGGAACACCGTGG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000207974.2 |
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| 3UTR-3UTR TCA 90 bp | GCAGGCGCTCCTTGGATGGATCGAACTCTCCCACCTCAGCCAGCTTTTCGGGAGAAAGGCACACAGATTTaGAAACAAGCAAGCAAGAAA | + |
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Preference number: 2 (lower is better) Translates to: AGAPWMDRTLPPQPAFREKGTQI*KQASKK Trigger: TTTCTTGCTTGCTTGTTTTCAAATCTGTGTGCCTTT...CTCCCGAAAAGCTGGCTGAGGTGGGAGAGTTCGATCCATCCAAGGAGCGCCTGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000207974.2 |
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| 3UTR-3UTR GCA 90 bp | TGTCTCTTTAATTTAAACTCTCAGAATAATACTCTGTCTTTGCATGGGATGCAGCTAGCTGGCAGCCCCTaGGGGGTGAAATGGAGACGG | + |
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Preference number: 2 (lower is better) Translates to: CLFNLNSQNNTLSLHGMQLAGSP*GVKWRR Trigger: CCGTCTCCATTTCACCCCGCAGGGGCTGCCAGCTAG...CTGCATCCCATGCAAAGACAGAGTATTATTCTGAGAGTTTAAATTAAAGAGACA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000045543.8 ENSMUST00000108571.9 ENSMUST00000207974.2 |
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| 3UTR TCA 72 bp | ACTCTCCCACCTCAGCCAGCTTTTCGGGAGCCACAATaGGTAGCTCTGCGATGGGCGTGGTCAGCGCCACGG | + |
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Preference number: 3 (lower is better) Translates to: TLPPQPAFREPQ*VALRWAWSAPR Trigger: CCGTGGCGCTGACCACGCCCATCGCAGAGCTACTCATTGTGGCTCCCGAAAAGCTGGCTGAGGTGGGAGAGT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000207974.2 |
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| 3UTR CCA 72 bp | GGCGTGGTCAGCGCCACGGTGTTCCTGTCCACACGGTaGTGCTCGAAGGCTCTGGACATGCTCTTCAGCTTC | + |
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Preference number: 3 (lower is better) Translates to: GVVSATVFLSTR*CSKALDMLFSF Trigger: GAAGCTGAAGAGCATGTCCAGAGCCTTCGAGCACCACCGTGTGGACAGGAACACCGTGGCGCTGACCACGCC 62% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000207974.2 |
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| 3UTR GCA 72 bp | GTGGTCAGCGCCACGGTGTTCCTGTCCACACGGTGGTaGTCGAAGGCTCTGGACATGCTCTTCAGCTTCTGG | + |
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Preference number: 3 (lower is better) Translates to: VVSATVFLSTRW*SKALDMLFSFW Trigger: CCAGAAGCTGAAGAGCATGTCCAGAGCCTTCGAGCACCACCGTGTGGACAGGAACACCGTGGCGCTGACCAC 61% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000207974.2 |
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| 3UTR CCA 72 bp | ACTCTGTCTTTGCATGGGATGCAGATGGGCTACTCCTaGCTAAGGAGGCCTAGCTGGCAGCCCCTGCGGGGT | + |
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Preference number: 3 (lower is better) Translates to: TLSLHGMQMGYS*LRRPSWQPLRG Trigger: ACCCCGCAGGGGCTGCCAGCTAGGCCTCCTTAGCCAGGAGTAGCCCATCTGCATCCCATGCAAAGACAGAGT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000045543.8 ENSMUST00000108571.9 ENSMUST00000207974.2 |
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| 3UTR-3UTR CAA 90 bp | GCAGGCGCTCCTTGGATGGATCGAACTCTCCCACCTCAGCCAGCTTTTCGGGAGAGTAGACCAGGGAAATaGAAGGCAGGCCTGGACACC | + |
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Preference number: 3 (lower is better) Translates to: AGAPWMDRTLPPQPAFRESRPGK*KAGLDT Trigger: GGTGTCCAGGCCTGCCTTCAATTTCCCTGGTCTACT...CTCCCGAAAAGCTGGCTGAGGTGGGAGAGTTCGATCCATCCAAGGAGCGCCTGC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000207974.2 |
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| 3UTR-3UTR CAA 90 bp | GTAGGTGATGGGCAGGAGCAGCTTGCTCTTCTTGAGAGCCTGCACCTTCTTGAGTCTAGCAGGCGCTCCTaGGATGGATCGAACTCTCCC | + |
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Preference number: 3 (lower is better) Translates to: VGDGQEQLALLESLHLLESSRRS*DGSNSP Trigger: GGGAGAGTTCGATCCATCCAAGGAGCGCCTGCTAGA...CTCAAGAAGGTGCAGGCTCTCAAGAAGAGCAAGCTGCTCCTGCCCATCACCTAC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000207974.2 |
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| 3UTR GCA 72 bp | TCCTGTCCACACGGTGGTGCTCGAAGGCTCTGGACATaGTCTTCAGCTTCTGGAAGGTGCCCAGGATCTTCT | + |
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Preference number: 3 (lower is better) Translates to: SCPHGGARRLWT*SSASGRCPGSS Trigger: AGAAGATCCTGGGCACCTTCCAGAAGCTGAAGAGCATGTCCAGAGCCTTCGAGCACCACCGTGTGGACAGGA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000207974.2 |
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| 3UTR GCA 72 bp | CTTGTAGCGGCAGAGGACCCCATCAGCATCCTTCACTaGAGGACCAAGAGGACAGAAAGAGGAGGACTGGAA | + |
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Preference number: 3 (lower is better) Translates to: LVAAEDPISILH*RTKRTERGGLE Trigger: TTCCAGTCCTCCTCTTTCTGTCCTCTTGGTCCTGCAGTGAAGGATGCTGATGGGGTCCTCTGCCGCTACAAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000207974.2 |
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| CDS-3UTR TCA 90 bp | GGGCCCAGTGCTCAGGAAGGGCAGCTTCTAGCCCTGGCGGTGCCCCGGGAAGGCCTTCGGAAACCCCGCTaGAGGAGGAGGCTGCCGACT | + |
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Preference number: 4 (lower is better) Translates to: GPSAQEGQLLALAVPREGLRKPR*RRRLPT Trigger: AGTCGGCAGCCTCCTCCTTCAGCGGGGTTTCCGAAG...GCCTTCCCGGGGCACCGCCAGGGCTAGAAGCTGCCCTTCCTGAGCACTGGGCCC 69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000045543.8 ENSMUST00000108571.9 ENSMUST00000207974.2 |
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| CDS-3UTR GCA 90 bp | GGGCCCAGTGCTCAGGAAGGGCAGCTTCTAGCCCTGGCGGTGCCCCGGGAAGGCAGTCTCGTCGTCCAGTaGCAGGAAGCAGCGGCGGGA | + |
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Preference number: 4 (lower is better) Translates to: GPSAQEGQLLALAVPREGSLVVQ*QEAAAG Trigger: TCCCGCCGCTGCTTCCTGGCACTGGACGACGAGACT...GCCTTCCCGGGGCACCGCCAGGGCTAGAAGCTGCCCTTCCTGAGCACTGGGCCC 69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000045543.8 ENSMUST00000108571.9 |
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| CDS-3UTR GCA 90 bp | GAGGCGTGCGGGGCGGCGGCATCACCGCTTGAAGCGGTAGGTGATGGGCAGGAGCCCCACTCACCCCGCTaGCTCTCTCGAGCCTTGGTC | + |
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Preference number: 4 (lower is better) Translates to: EACGAAASPLEAVGDGQEPHSPR*LSRALV Trigger: GACCAAGGCTCGAGAGAGGCAGCGGGGTGAGTGGGG...CTCCTGCCCATCACCTACCGCTTCAAGCGGTGATGCCGCCGCCCCGCACGCCTC 69% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000207974.2 |
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| CDS-3UTR GCA 90 bp | ACGGGGTGCCTAGCGTGTGCGGCCGAGAAGCAGGGCCCAGTGCTCAGGAAGGGCAGTCTCGTCGTCCAGTaGCAGGAAGCAGCGGCGGGA | + |
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Preference number: 4 (lower is better) Translates to: TGCLACAAEKQGPVLRKGSLVVQ*QEAAAG Trigger: TCCCGCCGCTGCTTCCTGGCACTGGACGACGAGACT...GCCCTTCCTGAGCACTGGGCCCTGCTTCTCGGCCGCACACGCTAGGCACCCCGT 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000045543.8 ENSMUST00000108571.9 |
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| CDS-3UTR GCA 90 bp | GGGCCCAGTGCTCAGGAAGGGCAGCTTCTAGCCCTGGCGGTGCCCCGGGAAGGCCGAGTTCCTCTCCAGTaGCATGTGCAGCTGGGCCTT | + |
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Preference number: 4 (lower is better) Translates to: GPSAQEGQLLALAVPREGRVPLQ*HVQLGL Trigger: AAGGCCCAGCTGCACATGGCACTGGAGAGGAACTCG...GCCTTCCCGGGGCACCGCCAGGGCTAGAAGCTGCCCTTCCTGAGCACTGGGCCC 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000045543.8 ENSMUST00000108571.9 ENSMUST00000207974.2 |
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| CDS-3UTR GCA 90 bp | ACGGGGTGCCTAGCGTGTGCGGCCGAGAAGCAGGGCCCAGTGCTCAGGAAGGGCGCATCCTTCACCCGCTaGCTCTCTCGAGCCTTGGTC | + |
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Preference number: 4 (lower is better) Translates to: TGCLACAAEKQGPVLRKGASFTR*LSRALV Trigger: GACCAAGGCTCGAGAGAGGCAGCGGGTGAAGGATGC...GCCCTTCCTGAGCACTGGGCCCTGCTTCTCGGCCGCACACGCTAGGCACCCCGT 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000045543.8 ENSMUST00000108571.9 |
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| CDS-3UTR CCA 90 bp | GGGCCCAGTGCTCAGGAAGGGCAGCTTCTAGCCCTGGCGGTGCCCCGGGAAGGCCAGGCGCTCCTTGGATaGATCGAACTCTCCCACCTC | + |
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Preference number: 4 (lower is better) Translates to: GPSAQEGQLLALAVPREGQALLG*IELSHL Trigger: GAGGTGGGAGAGTTCGATCCATCCAAGGAGCGCCTG...GCCTTCCCGGGGCACCGCCAGGGCTAGAAGCTGCCCTTCCTGAGCACTGGGCCC 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000045543.8 ENSMUST00000108571.9 |
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| CDS-3UTR TCA 90 bp | ACGGGGTGCCTAGCGTGTGCGGCCGAGAAGCAGGGCCCAGTGCTCAGGAAGGGCGAGCCTGCACCTTCTTaGGAGTCTCGTCGTCCAGTG | + |
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Preference number: 4 (lower is better) Translates to: TGCLACAAEKQGPVLRKGEPAPS*ESRRPV Trigger: CACTGGACGACGAGACTCTCAAGAAGGTGCAGGCTC...GCCCTTCCTGAGCACTGGGCCCTGCTTCTCGGCCGCACACGCTAGGCACCCCGT 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000045543.8 ENSMUST00000108571.9 |
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| CDS-3UTR TCA 90 bp | AGGGCCCAGTGCTCAGGAAGGGCAGCTTCTAGCCCTGGCGGTGCCCCGGGAAGGGAGCCTGCACCTTCTTaGGAGTCTCGTCGTCCAGTG | + |
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Preference number: 4 (lower is better) Translates to: RAQCSGRAASSPGGAPGREPAPS*ESRRPV Trigger: CACTGGACGACGAGACTCTCAAGAAGGTGCAGGCTC...CCTTCCCGGGGCACCGCCAGGGCTAGAAGCTGCCCTTCCTGAGCACTGGGCCCT 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000045543.8 ENSMUST00000108571.9 |
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| CDS-3UTR TCA 90 bp | TCCTGGCTAAGGAGGCCTAGCTGGCAGCCCCTGCGGGGTGAAATGGAGACGGGGTGCAGACCCAGCAACTaGGCCCTTGGGGGCACTGGA | + |
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Preference number: 4 (lower is better) Translates to: SWLRRPSWQPLRGEMETGCRPSN*ALGGTG Trigger: TCCAGTGCCCCCAAGGGCTCAGTTGCTGGGTCTGCA...CCCCGTCTCCATTTCACCCCGCAGGGGCTGCCAGCTAGGCCTCCTTAGCCAGGA 66% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENSMUST00000108571.9 |
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| CDS-3UTR GCA 90 bp | GGGCCCAGTGCTCAGGAAGGGCAGCTTCTAGCCCTGGCGGTGCCCCGGGAAGGCCCTCCAGGTCCTCAATaGGCTTCTGCAACCACGAGT | + |
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Preference number: 4 (lower is better) Translates to: GPSAQEGQLLALAVPREGPPGPQ*ASATTS Trigger: ACTCGTGGTTGCAGAAGCGCATTGAGGACCTGGAGG...GCCTTCCCGGGGCACCGCCAGGGCTAGAAGCTGCCCTTCCTGAGCACTGGGCCC 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000045543.8 ENSMUST00000108571.9 ENSMUST00000207974.2 |
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| CDS-3UTR GCA 90 bp | TCCTGGCTAAGGAGGCCTAGCTGGCAGCCCCTGCGGGGTGAAATGGAGACGGGGCTCCAACCCCAGCCCTaGTGTCCCCATCAACCCTCC | + |
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Preference number: 4 (lower is better) Translates to: SWLRRPSWQPLRGEMETGLQPQP*CPHQPS Trigger: GGAGGGTTGATGGGGACAGCAGGGCTGGGGTTGGAG...CCCCGTCTCCATTTCACCCCGCAGGGGCTGCCAGCTAGGCCTCCTTAGCCAGGA 66% GC, longest homopolymer 4 nt, total homopolymer stretches 20 nt. Matches the following 3 transcripts: ENSMUST00000045543.8 ENSMUST00000108571.9 ENSMUST00000207974.2 |
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| CDS-3UTR CCA 90 bp | ACGGGGTGCCTAGCGTGTGCGGCCGAGAAGCAGGGCCCAGTGCTCAGGAAGGGCTTCCTGTCCACACGGTaGTGCTCGAAGGCTCTGGAC | + |
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Preference number: 4 (lower is better) Translates to: TGCLACAAEKQGPVLRKGFLSTR*CSKALD Trigger: GTCCAGAGCCTTCGAGCACCACCGTGTGGACAGGAA...GCCCTTCCTGAGCACTGGGCCCTGCTTCTCGGCCGCACACGCTAGGCACCCCGT 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000045543.8 ENSMUST00000108571.9 |
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| CDS-3UTR CCA 90 bp | GGCTACTCCTGGCTAAGGAGGCCTAGCTGGCAGCCCCTGCGGGGTGAAATGGAGGCTCTGCGATGGGCGTaGTCAGCGCCACGGTGTTCC | + |
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Preference number: 4 (lower is better) Translates to: GYSWLRRPSWQPLRGEMEALRWA*SAPRCS Trigger: GGAACACCGTGGCGCTGACCACGCCCATCGCAGAGC...CTCCATTTCACCCCGCAGGGGCTGCCAGCTAGGCCTCCTTAGCCAGGAGTAGCC 66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000045543.8 ENSMUST00000108571.9 |
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| CDS-3UTR GCA 90 bp | AGGGCCCAGTGCTCAGGAAGGGCAGCTTCTAGCCCTGGCGGTGCCCCGGGAAGGCCTCCAGGTCCTCAATaGGCTTCTGCAACCACGAGT | + |
|
Preference number: 4 (lower is better) Translates to: RAQCSGRAASSPGGAPGRPPGPQ*ASATTS Trigger: ACTCGTGGTTGCAGAAGCGCATTGAGGACCTGGAGG...CCTTCCCGGGGCACCGCCAGGGCTAGAAGCTGCCCTTCCTGAGCACTGGGCCCT 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000045543.8 ENSMUST00000108571.9 ENSMUST00000207974.2 |
||
| CDS-3UTR TCA 90 bp | AGGGCCCAGTGCTCAGGAAGGGCAGCTTCTAGCCCTGGCGGTGCCCCGGGAAGGTCCGGGCAGAGGAAATaGATTTGTCCAGCTGACACC | + |
|
Preference number: 4 (lower is better) Translates to: RAQCSGRAASSPGGAPGRSGQRK*ICPADT Trigger: GGTGTCAGCTGGACAAATTCATTTCCTCTGCCCGGA...CCTTCCCGGGGCACCGCCAGGGCTAGAAGCTGCCCTTCCTGAGCACTGGGCCCT 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000045543.8 ENSMUST00000108571.9 ENSMUST00000207974.2 |
||
| CDS-3UTR GCA 90 bp | GGCTACTCCTGGCTAAGGAGGCCTAGCTGGCAGCCCCTGCGGGGTGAAATGGAGGCATCCTTCACCCGCTaGCTCTCTCGAGCCTTGGTC | + |
|
Preference number: 4 (lower is better) Translates to: GYSWLRRPSWQPLRGEMEASFTR*LSRALV Trigger: GACCAAGGCTCGAGAGAGGCAGCGGGTGAAGGATGC...CTCCATTTCACCCCGCAGGGGCTGCCAGCTAGGCCTCCTTAGCCAGGAGTAGCC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000045543.8 ENSMUST00000108571.9 |
||
| CDS-3UTR GCA 90 bp | GGGCCCAGTGCTCAGGAAGGGCAGCTTCTAGCCCTGGCGGTGCCCCGGGAAGGCTCAGCTTCTGGAAGGTaGCCAGGATCTTCTTGTAGC | + |
|
Preference number: 4 (lower is better) Translates to: GPSAQEGQLLALAVPREGSASGR*PGSSCS Trigger: GCTACAAGAAGATCCTGGGCACCTTCCAGAAGCTGA...GCCTTCCCGGGGCACCGCCAGGGCTAGAAGCTGCCCTTCCTGAGCACTGGGCCC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000045543.8 ENSMUST00000108571.9 |
||
| CDS-3UTR CCA 90 bp | GGGCCCAGTGCTCAGGAAGGGCAGCTTCTAGCCCTGGCGGTGCCCCGGGAAGGCGCCTCTTCCTTTCACTaGCACTTCCGTCTTCGGAAA | + |
|
Preference number: 4 (lower is better) Translates to: GPSAQEGQLLALAVPREGASSFH*HFRLRK Trigger: TTTCCGAAGACGGAAGTGCCAGTGAAAGGAAGAGGC...GCCTTCCCGGGGCACCGCCAGGGCTAGAAGCTGCCCTTCCTGAGCACTGGGCCC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000045543.8 ENSMUST00000108571.9 ENSMUST00000207974.2 |
||
| CDS-3UTR CCA 90 bp | AGGGCCCAGTGCTCAGGAAGGGCAGCTTCTAGCCCTGGCGGTGCCCCGGGAAGGGGTGCTCGAAGGCTCTaGACATGCTCTTCAGCTTCT | + |
|
Preference number: 4 (lower is better) Translates to: RAQCSGRAASSPGGAPGRGARRL*TCSSAS Trigger: AGAAGCTGAAGAGCATGTCCAGAGCCTTCGAGCACC...CCTTCCCGGGGCACCGCCAGGGCTAGAAGCTGCCCTTCCTGAGCACTGGGCCCT 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000045543.8 ENSMUST00000108571.9 |
||
| CDS-3UTR GCA 90 bp | AGGGCCCAGTGCTCAGGAAGGGCAGCTTCTAGCCCTGGCGGTGCCCCGGGAAGGTCAGCTTCTGGAAGGTaGCCAGGATCTTCTTGTAGC | + |
|
Preference number: 4 (lower is better) Translates to: RAQCSGRAASSPGGAPGRSASGR*PGSSCS Trigger: GCTACAAGAAGATCCTGGGCACCTTCCAGAAGCTGA...CCTTCCCGGGGCACCGCCAGGGCTAGAAGCTGCCCTTCCTGAGCACTGGGCCCT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000045543.8 ENSMUST00000108571.9 |
||
| CDS-3UTR CCA 90 bp | ACGGGGTGCCTAGCGTGTGCGGCCGAGAAGCAGGGCCCAGTGCTCAGGAAGGGCATGCTCTTCAGCTTCTaGAAGGTGCCCAGGATCTTC | + |
|
Preference number: 4 (lower is better) Translates to: TGCLACAAEKQGPVLRKGMLFSF*KVPRIF Trigger: GAAGATCCTGGGCACCTTCCAGAAGCTGAAGAGCAT...GCCCTTCCTGAGCACTGGGCCCTGCTTCTCGGCCGCACACGCTAGGCACCCCGT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000045543.8 ENSMUST00000108571.9 |
||
| CDS-3UTR CCA 90 bp | GGCTACTCCTGGCTAAGGAGGCCTAGCTGGCAGCCCCTGCGGGGTGAAATGGAGCAGGCGCTCCTTGGATaGATCGAACTCTCCCACCTC | + |
|
Preference number: 4 (lower is better) Translates to: GYSWLRRPSWQPLRGEMEQALLG*IELSHL Trigger: GAGGTGGGAGAGTTCGATCCATCCAAGGAGCGCCTG...CTCCATTTCACCCCGCAGGGGCTGCCAGCTAGGCCTCCTTAGCCAGGAGTAGCC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000045543.8 ENSMUST00000108571.9 |
||
| CDS-3UTR GCA 90 bp | TCCTGGCTAAGGAGGCCTAGCTGGCAGCCCCTGCGGGGTGAAATGGAGACGGGGTCCTCAATGCGCTTCTaGAACCACGAGTTCCTCTCC | + |
|
Preference number: 4 (lower is better) Translates to: SWLRRPSWQPLRGEMETGSSMRF*NHEFLS Trigger: GGAGAGGAACTCGTGGTTGCAGAAGCGCATTGAGGA...CCCCGTCTCCATTTCACCCCGCAGGGGCTGCCAGCTAGGCCTCCTTAGCCAGGA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000045543.8 ENSMUST00000108571.9 ENSMUST00000207974.2 |
||
| CDS-3UTR GCA 90 bp | GGCTACTCCTGGCTAAGGAGGCCTAGCTGGCAGCCCCTGCGGGGTGAAATGGAGCCTCCAGGTCCTCAATaGGCTTCTGCAACCACGAGT | + |
|
Preference number: 4 (lower is better) Translates to: GYSWLRRPSWQPLRGEMEPPGPQ*ASATTS Trigger: ACTCGTGGTTGCAGAAGCGCATTGAGGACCTGGAGG...CTCCATTTCACCCCGCAGGGGCTGCCAGCTAGGCCTCCTTAGCCAGGAGTAGCC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000045543.8 ENSMUST00000108571.9 ENSMUST00000207974.2 |
||
| CDS-3UTR GCA 90 bp | GGGCCCAGTGCTCAGGAAGGGCAGCTTCTAGCCCTGGCGGTGCCCCGGGAAGGCCTAGTACTTCCCTTCTaGTTCTGCCTCTTCCTTTCA | + |
|
Preference number: 4 (lower is better) Translates to: GPSAQEGQLLALAVPREGLVLPF*FCLFLS Trigger: TGAAAGGAAGAGGCAGAAGCAGAAGGGAAGTACTAG...GCCTTCCCGGGGCACCGCCAGGGCTAGAAGCTGCCCTTCCTGAGCACTGGGCCC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000045543.8 ENSMUST00000108571.9 ENSMUST00000207974.2 |
||
| CDS-3UTR GCA 90 bp | TCCTGGCTAAGGAGGCCTAGCTGGCAGCCCCTGCGGGGTGAAATGGAGACGGGGCGAAGGCTCTGGACATaGTCTTCAGCTTCTGGAAGG | + |
|
Preference number: 4 (lower is better) Translates to: SWLRRPSWQPLRGEMETGRRLWT*SSASGR Trigger: CCTTCCAGAAGCTGAAGAGCATGTCCAGAGCCTTCG...CCCCGTCTCCATTTCACCCCGCAGGGGCTGCCAGCTAGGCCTCCTTAGCCAGGA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000045543.8 ENSMUST00000108571.9 |
||
| CDS-3UTR GCA 90 bp | GGCTACTCCTGGCTAAGGAGGCCTAGCTGGCAGCCCCTGCGGGGTGAAATGGAGTCCTCAATGCGCTTCTaGAACCACGAGTTCCTCTCC | + |
|
Preference number: 4 (lower is better) Translates to: GYSWLRRPSWQPLRGEMESSMRF*NHEFLS Trigger: GGAGAGGAACTCGTGGTTGCAGAAGCGCATTGAGGA...CTCCATTTCACCCCGCAGGGGCTGCCAGCTAGGCCTCCTTAGCCAGGAGTAGCC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000045543.8 ENSMUST00000108571.9 ENSMUST00000207974.2 |
||
| CDS-3UTR CCA 90 bp | GGGCCCAGTGCTCAGGAAGGGCAGCTTCTAGCCCTGGCGGTGCCCCGGGAAGGCCCTCTTCAAAGGGAATaGAGATCTCAAAGGTCTCTT | + |
|
Preference number: 4 (lower is better) Translates to: GPSAQEGQLLALAVPREGPLQRE*RSQRSL Trigger: AAGAGACCTTTGAGATCTCCATTCCCTTTGAAGAGG...GCCTTCCCGGGGCACCGCCAGGGCTAGAAGCTGCCCTTCCTGAGCACTGGGCCC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000045543.8 ENSMUST00000108571.9 ENSMUST00000207974.2 |
||
| CDS-3UTR CCA 90 bp | AGGGCCCAGTGCTCAGGAAGGGCAGCTTCTAGCCCTGGCGGTGCCCCGGGAAGGATTTGTGAGTCTAAGTaGGGTGCCTCTTCAAAGGGA | + |
|
Preference number: 4 (lower is better) Translates to: RAQCSGRAASSPGGAPGRICESK*GASSKG Trigger: TCCCTTTGAAGAGGCACCCCACTTAGACTCACAAAT...CCTTCCCGGGGCACCGCCAGGGCTAGAAGCTGCCCTTCCTGAGCACTGGGCCCT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000045543.8 ENSMUST00000108571.9 ENSMUST00000207974.2 |
||
| CDS-3UTR CCA 90 bp | TCCTGGCTAAGGAGGCCTAGCTGGCAGCCCCTGCGGGGTGAAATGGAGACGGGGATGCTCTTCAGCTTCTaGAAGGTGCCCAGGATCTTC | + |
|
Preference number: 4 (lower is better) Translates to: SWLRRPSWQPLRGEMETGMLFSF*KVPRIF Trigger: GAAGATCCTGGGCACCTTCCAGAAGCTGAAGAGCAT...CCCCGTCTCCATTTCACCCCGCAGGGGCTGCCAGCTAGGCCTCCTTAGCCAGGA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000045543.8 ENSMUST00000108571.9 |
||
| CDS-3UTR TCA 90 bp | GGCTACTCCTGGCTAAGGAGGCCTAGCTGGCAGCCCCTGCGGGGTGAAATGGAGATGAATTTGTCCAGCTaGCACCGCAAGAAGTCCCTC | + |
|
Preference number: 4 (lower is better) Translates to: GYSWLRRPSWQPLRGEMEMNLSS*HRKKSL Trigger: GAGGGACTTCTTGCGGTGTCAGCTGGACAAATTCAT...CTCCATTTCACCCCGCAGGGGCTGCCAGCTAGGCCTCCTTAGCCAGGAGTAGCC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000045543.8 ENSMUST00000108571.9 ENSMUST00000207974.2 |
||
| CDS-3UTR GCA 90 bp | GTAGGTGATGGGCAGGAGCAGCTTGCTCTTCTTGAGAGCCTGCACCTTCTTGAGCTCCAACCCCAGCCCTaGTGTCCCCATCAACCCTCC | + |
|
Preference number: 4 (lower is better) Translates to: VGDGQEQLALLESLHLLELQPQP*CPHQPS Trigger: GGAGGGTTGATGGGGACAGCAGGGCTGGGGTTGGAG...CTCAAGAAGGTGCAGGCTCTCAAGAAGAGCAAGCTGCTCCTGCCCATCACCTAC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000207974.2 |
||
| CDS-3UTR CCA 90 bp | AGGGCCCAGTGCTCAGGAAGGGCAGCTTCTAGCCCTGGCGGTGCCCCGGGAAGGCCTCTTCAAAGGGAATaGAGATCTCAAAGGTCTCTT | + |
|
Preference number: 4 (lower is better) Translates to: RAQCSGRAASSPGGAPGRPLQRE*RSQRSL Trigger: AAGAGACCTTTGAGATCTCCATTCCCTTTGAAGAGG...CCTTCCCGGGGCACCGCCAGGGCTAGAAGCTGCCCTTCCTGAGCACTGGGCCCT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000045543.8 ENSMUST00000108571.9 ENSMUST00000207974.2 |
||
| CDS-3UTR GCA 90 bp | TCCTGGCTAAGGAGGCCTAGCTGGCAGCCCCTGCGGGGTGAAATGGAGACGGGGCTAGTACTTCCCTTCTaGTTCTGCCTCTTCCTTTCA | + |
|
Preference number: 4 (lower is better) Translates to: SWLRRPSWQPLRGEMETGLVLPF*FCLFLS Trigger: TGAAAGGAAGAGGCAGAAGCAGAAGGGAAGTACTAG...CCCCGTCTCCATTTCACCCCGCAGGGGCTGCCAGCTAGGCCTCCTTAGCCAGGA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000045543.8 ENSMUST00000108571.9 ENSMUST00000207974.2 |
||
| CDS-3UTR TCA 90 bp | GCCACGGTGTTCCTGTCCACACGGTGGTGCTCGAAGGCTCTGGACATGCTCTTCATGAATTTGTCCAGCTaGCACCGCAAGAAGTCCCTC | + |
|
Preference number: 4 (lower is better) Translates to: ATVFLSTRWCSKALDMLFMNLSS*HRKKSL Trigger: GAGGGACTTCTTGCGGTGTCAGCTGGACAAATTCAT...GAAGAGCATGTCCAGAGCCTTCGAGCACCACCGTGTGGACAGGAACACCGTGGC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000207974.2 |
||
| CDS-3UTR CCA 90 bp | ATGGGCGTGGTCAGCGCCACGGTGTTCCTGTCCACACGGTGGTGCTCGAAGGCTATTTGTGAGTCTAAGTaGGGTGCCTCTTCAAAGGGA | + |
|
Preference number: 4 (lower is better) Translates to: MGVVSATVFLSTRWCSKAICESK*GASSKG Trigger: TCCCTTTGAAGAGGCACCCCACTTAGACTCACAAAT...AGCCTTCGAGCACCACCGTGTGGACAGGAACACCGTGGCGCTGACCACGCCCAT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000207974.2 |
||
| CDS-3UTR CCA 90 bp | CCACGGTGTTCCTGTCCACACGGTGGTGCTCGAAGGCTCTGGACATGCTCTTCAGCCTCTTCCTTTCACTaGCACTTCCGTCTTCGGAAA | + |
|
Preference number: 4 (lower is better) Translates to: PRCSCPHGGARRLWTCSSASSFH*HFRLRK Trigger: TTTCCGAAGACGGAAGTGCCAGTGAAAGGAAGAGGC...TGAAGAGCATGTCCAGAGCCTTCGAGCACCACCGTGTGGACAGGAACACCGTGG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000207974.2 |
||
| CDS-3UTR TCA 90 bp | GTAGGTGATGGGCAGGAGCAGCTTGCTCTTCTTGAGAGCCTGCACCTTCTTGAGTCCGGGCAGAGGAAATaGATTTGTCCAGCTGACACC | + |
|
Preference number: 4 (lower is better) Translates to: VGDGQEQLALLESLHLLESGQRK*ICPADT Trigger: GGTGTCAGCTGGACAAATTCATTTCCTCTGCCCGGA...CTCAAGAAGGTGCAGGCTCTCAAGAAGAGCAAGCTGCTCCTGCCCATCACCTAC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000207974.2 |
||
| CDS-3UTR CCA 90 bp | CTCTTTAATTTAAACTCTCAGAATAATACTCTGTCTTTGCATGGGATGCAGATGGCTCTGCGATGGGCGTaGTCAGCGCCACGGTGTTCC | + |
|
Preference number: 4 (lower is better) Translates to: LFNLNSQNNTLSLHGMQMALRWA*SAPRCS Trigger: GGAACACCGTGGCGCTGACCACGCCCATCGCAGAGC...CATCTGCATCCCATGCAAAGACAGAGTATTATTCTGAGAGTTTAAATTAAAGAG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000045543.8 ENSMUST00000108571.9 |
||
| CDS-3UTR TCA 90 bp | CTCTTTAATTTAAACTCTCAGAATAATACTCTGTCTTTGCATGGGATGCAGATGCTTCGGAAACCCCGCTaGAGGAGGAGGCTGCCGACT | + |
|
Preference number: 4 (lower is better) Translates to: LFNLNSQNNTLSLHGMQMLRKPR*RRRLPT Trigger: AGTCGGCAGCCTCCTCCTTCAGCGGGGTTTCCGAAG...CATCTGCATCCCATGCAAAGACAGAGTATTATTCTGAGAGTTTAAATTAAAGAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000045543.8 ENSMUST00000108571.9 ENSMUST00000207974.2 |
||
| CDS-3UTR GCA 90 bp | CTCTTTAATTTAAACTCTCAGAATAATACTCTGTCTTTGCATGGGATGCAGATGCTCCAACCCCAGCCCTaGTGTCCCCATCAACCCTCC | + |
|
Preference number: 4 (lower is better) Translates to: LFNLNSQNNTLSLHGMQMLQPQP*CPHQPS Trigger: GGAGGGTTGATGGGGACAGCAGGGCTGGGGTTGGAG...CATCTGCATCCCATGCAAAGACAGAGTATTATTCTGAGAGTTTAAATTAAAGAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000045543.8 ENSMUST00000108571.9 ENSMUST00000207974.2 |
||
| CDS-3UTR GCA 90 bp | TGTCTCTTTAATTTAAACTCTCAGAATAATACTCTGTCTTTGCATGGGATGCAGCGAGTTCCTCTCCAGTaGCATGTGCAGCTGGGCCTT | + |
|
Preference number: 4 (lower is better) Translates to: CLFNLNSQNNTLSLHGMQRVPLQ*HVQLGL Trigger: AAGGCCCAGCTGCACATGGCACTGGAGAGGAACTCG...CTGCATCCCATGCAAAGACAGAGTATTATTCTGAGAGTTTAAATTAAAGAGACA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000045543.8 ENSMUST00000108571.9 ENSMUST00000207974.2 |
||
| CDS-3UTR GCA 90 bp | CTCTTTAATTTAAACTCTCAGAATAATACTCTGTCTTTGCATGGGATGCAGATGCGAGTTCCTCTCCAGTaGCATGTGCAGCTGGGCCTT | + |
|
Preference number: 4 (lower is better) Translates to: LFNLNSQNNTLSLHGMQMRVPLQ*HVQLGL Trigger: AAGGCCCAGCTGCACATGGCACTGGAGAGGAACTCG...CATCTGCATCCCATGCAAAGACAGAGTATTATTCTGAGAGTTTAAATTAAAGAG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000045543.8 ENSMUST00000108571.9 ENSMUST00000207974.2 |
||
| CDS-3UTR CCA 90 bp | TGTCTCTTTAATTTAAACTCTCAGAATAATACTCTGTCTTTGCATGGGATGCAGCAGTCCCTGGAGAGGTaGAATACCTGTCCCTCCGGA | + |
|
Preference number: 4 (lower is better) Translates to: CLFNLNSQNNTLSLHGMQQSLER*NTCPSG Trigger: TCCGGAGGGACAGGTATTCCACCTCTCCAGGGACTG...CTGCATCCCATGCAAAGACAGAGTATTATTCTGAGAGTTTAAATTAAAGAGACA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000108571.9 |
||
| CDS-3UTR TCA 90 bp | CTCTTTAATTTAAACTCTCAGAATAATACTCTGTCTTTGCATGGGATGCAGATGTCCGGGCAGAGGAAATaGATTTGTCCAGCTGACACC | + |
|
Preference number: 4 (lower is better) Translates to: LFNLNSQNNTLSLHGMQMSGQRK*ICPADT Trigger: GGTGTCAGCTGGACAAATTCATTTCCTCTGCCCGGA...CATCTGCATCCCATGCAAAGACAGAGTATTATTCTGAGAGTTTAAATTAAAGAG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000045543.8 ENSMUST00000108571.9 ENSMUST00000207974.2 |
||
| CDS-3UTR GCA 90 bp | TGTCTCTTTAATTTAAACTCTCAGAATAATACTCTGTCTTTGCATGGGATGCAGCGAAGGCTCTGGACATaGTCTTCAGCTTCTGGAAGG | + |
|
Preference number: 4 (lower is better) Translates to: CLFNLNSQNNTLSLHGMQRRLWT*SSASGR Trigger: CCTTCCAGAAGCTGAAGAGCATGTCCAGAGCCTTCG...CTGCATCCCATGCAAAGACAGAGTATTATTCTGAGAGTTTAAATTAAAGAGACA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000045543.8 ENSMUST00000108571.9 |
||
| CDS-3UTR CCA 90 bp | TGTCTCTTTAATTTAAACTCTCAGAATAATACTCTGTCTTTGCATGGGATGCAGAGTGCCATGTGCAGCTaGGCCTTAACACTGCTCATC | + |
|
Preference number: 4 (lower is better) Translates to: CLFNLNSQNNTLSLHGMQSAMCS*ALTLLI Trigger: GATGAGCAGTGTTAAGGCCCAGCTGCACATGGCACT...CTGCATCCCATGCAAAGACAGAGTATTATTCTGAGAGTTTAAATTAAAGAGACA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000045543.8 ENSMUST00000108571.9 ENSMUST00000207974.2 |
||
| 3UTR CAA 72 bp | CTCTTTAATTTAAACTCTCAGAATAATACTCTGTCTTaGCATGGGATGCAGATGGGCTACTCCTGGCTAAGG | + |
|
Preference number: 4 (lower is better) Translates to: LFNLNSQNNTLS*HGMQMGYSWLR Trigger: CCTTAGCCAGGAGTAGCCCATCTGCATCCCATGCAAAGACAGAGTATTATTCTGAGAGTTTAAATTAAAGAG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000045543.8 ENSMUST00000108571.9 ENSMUST00000207974.2 |
||
| CDS-3UTR CCA 90 bp | TGTCTCTTTAATTTAAACTCTCAGAATAATACTCTGTCTTTGCATGGGATGCAGGCCTCTTCCTTTCACTaGCACTTCCGTCTTCGGAAA | + |
|
Preference number: 4 (lower is better) Translates to: CLFNLNSQNNTLSLHGMQASSFH*HFRLRK Trigger: TTTCCGAAGACGGAAGTGCCAGTGAAAGGAAGAGGC...CTGCATCCCATGCAAAGACAGAGTATTATTCTGAGAGTTTAAATTAAAGAGACA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000045543.8 ENSMUST00000108571.9 ENSMUST00000207974.2 |
||
| CDS-3UTR GCA 90 bp | CTCTTTAATTTAAACTCTCAGAATAATACTCTGTCTTTGCATGGGATGCAGATGCTAGTACTTCCCTTCTaGTTCTGCCTCTTCCTTTCA | + |
|
Preference number: 4 (lower is better) Translates to: LFNLNSQNNTLSLHGMQMLVLPF*FCLFLS Trigger: TGAAAGGAAGAGGCAGAAGCAGAAGGGAAGTACTAG...CATCTGCATCCCATGCAAAGACAGAGTATTATTCTGAGAGTTTAAATTAAAGAG 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000045543.8 ENSMUST00000108571.9 ENSMUST00000207974.2 |
||
| CDS-3UTR CCA 90 bp | TGTCTCTTTAATTTAAACTCTCAGAATAATACTCTGTCTTTGCATGGGATGCAGCACCAGTCTGTTCAGTaGGAAGTTACTCTTAAAAGC | + |
|
Preference number: 4 (lower is better) Translates to: CLFNLNSQNNTLSLHGMQHQSVQ*EVTLKS Trigger: GCTTTTAAGAGTAACTTCCCACTGAACAGACTGGTG...CTGCATCCCATGCAAAGACAGAGTATTATTCTGAGAGTTTAAATTAAAGAGACA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000108571.9 |
||
| CDS-3UTR CAA 90 bp | TCCTGGCTAAGGAGGCCTAGCTGGCAGCCCCTGCGGGGTGAAATGGAGACGGGGTCATCAGGGCCAGGGTaGGGGAGGCGCCCTCTGGAG | + |
|
Preference number: 5 (lower is better) Translates to: SWLRRPSWQPLRGEMETGSSGPG*GRRPLE Trigger: CTCCAGAGGGCGCCTCCCCAACCCTGGCCCTGATGA...CCCCGTCTCCATTTCACCCCGCAGGGGCTGCCAGCTAGGCCTCCTTAGCCAGGA 68% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 3 transcripts: ENSMUST00000045543.8 ENSMUST00000108571.9 ENSMUST00000207974.2 |
||
| CDS-3UTR CAA 90 bp | ACGGGGTGCCTAGCGTGTGCGGCCGAGAAGCAGGGCCCAGTGCTCAGGAAGGGCCCAGCAACTGAGCCCTaGGGGGCACTGGACAGAAGC | + |
|
Preference number: 5 (lower is better) Translates to: TGCLACAAEKQGPVLRKGPATEP*GALDRS Trigger: GCTTCTGTCCAGTGCCCCCAAGGGCTCAGTTGCTGG...GCCCTTCCTGAGCACTGGGCCCTGCTTCTCGGCCGCACACGCTAGGCACCCCGT 68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000108571.9 |
||
| CDS-3UTR CAA 90 bp | ATGGGCGTGGTCAGCGCCACGGTGTTCCTGTCCACACGGTGGTGCTCGAAGGCTTCATCAGGGCCAGGGTaGGGGAGGCGCCCTCTGGAG | + |
|
Preference number: 5 (lower is better) Translates to: MGVVSATVFLSTRWCSKASSGPG*GRRPLE Trigger: CTCCAGAGGGCGCCTCCCCAACCCTGGCCCTGATGA...AGCCTTCGAGCACCACCGTGTGGACAGGAACACCGTGGCGCTGACCACGCCCAT 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000207974.2 |
||
| CDS-3UTR CAA 90 bp | AGGGCCCAGTGCTCAGGAAGGGCAGCTTCTAGCCCTGGCGGTGCCCCGGGAAGGTCTAGCAGGCGCTCCTaGGATGGATCGAACTCTCCC | + |
|
Preference number: 5 (lower is better) Translates to: RAQCSGRAASSPGGAPGRSSRRS*DGSNSP Trigger: GGGAGAGTTCGATCCATCCAAGGAGCGCCTGCTAGA...CCTTCCCGGGGCACCGCCAGGGCTAGAAGCTGCCCTTCCTGAGCACTGGGCCCT 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000045543.8 ENSMUST00000108571.9 |
||
| CDS-3UTR CAA 90 bp | AGGGCCCAGTGCTCAGGAAGGGCAGCTTCTAGCCCTGGCGGTGCCCCGGGAAGGTGCCTCTCTCGAGCCTaGGTCTTCCCAAATCGCTTC | + |
|
Preference number: 5 (lower is better) Translates to: RAQCSGRAASSPGGAPGRCLSRA*VFPNRF Trigger: GAAGCGATTTGGGAAGACCAAGGCTCGAGAGAGGCA...CCTTCCCGGGGCACCGCCAGGGCTAGAAGCTGCCCTTCCTGAGCACTGGGCCCT 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000045543.8 ENSMUST00000108571.9 ENSMUST00000207974.2 |
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| CDS-3UTR CAA 90 bp | GGGCCCAGTGCTCAGGAAGGGCAGCTTCTAGCCCTGGCGGTGCCCCGGGAAGGCAGCAGCTTGCTCTTCTaGAGAGCCTGCACCTTCTTG | + |
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Preference number: 5 (lower is better) Translates to: GPSAQEGQLLALAVPREGSSLLF*RACTFL Trigger: CAAGAAGGTGCAGGCTCTCAAGAAGAGCAAGCTGCT...GCCTTCCCGGGGCACCGCCAGGGCTAGAAGCTGCCCTTCCTGAGCACTGGGCCC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000045543.8 ENSMUST00000108571.9 |
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| CDS-3UTR CAA 90 bp | TCCTGGCTAAGGAGGCCTAGCTGGCAGCCCCTGCGGGGTGAAATGGAGACGGGGTCTAGCAGGCGCTCCTaGGATGGATCGAACTCTCCC | + |
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Preference number: 5 (lower is better) Translates to: SWLRRPSWQPLRGEMETGSSRRS*DGSNSP Trigger: GGGAGAGTTCGATCCATCCAAGGAGCGCCTGCTAGA...CCCCGTCTCCATTTCACCCCGCAGGGGCTGCCAGCTAGGCCTCCTTAGCCAGGA 63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000045543.8 ENSMUST00000108571.9 |
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| CDS-3UTR CAA 90 bp | ACGGGGTGCCTAGCGTGTGCGGCCGAGAAGCAGGGCCCAGTGCTCAGGAAGGGCAGCAGCTTGCTCTTCTaGAGAGCCTGCACCTTCTTG | + |
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Preference number: 5 (lower is better) Translates to: TGCLACAAEKQGPVLRKGSSLLF*RACTFL Trigger: CAAGAAGGTGCAGGCTCTCAAGAAGAGCAAGCTGCT...GCCCTTCCTGAGCACTGGGCCCTGCTTCTCGGCCGCACACGCTAGGCACCCCGT 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000045543.8 ENSMUST00000108571.9 |
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| CDS CCA 90 bp | TGCCATGTGCAGCTGGGCCTTAACACTGCTCATCAGGGCCAGGGTTaGGGAGGCGCCCTCTGGAGGCTCCTCAACATTTCTCCGAGACGG | + |
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Preference number: 5 (lower is better) Translates to: CHVQLGLNTAHQGQG*GGALWRLLNISPRR Trigger: CCGTCTCGGAGAAATGTTGAGGAGCCTCCAGAGGGCGCCTCCCCAACCCTGGCCCTGATGAGCAGTGTTAAGGCCCAGCTGCACATGGCA 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000045543.8 ENSMUST00000108571.9 ENSMUST00000207974.2 ENSMUST00000208042.2 ENSMUST00000208161.2 |
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| CDS CCA 90 bp | ATGCGCTTCTGCAACCACGAGTTCCTCTCCAGTGCCATGTGCAGCTaGGCCTTAACACTGCTCATCAGGGCCAGGGTTGGGGAGGCGCCC | + |
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Preference number: 5 (lower is better) Translates to: MRFCNHEFLSSAMCS*ALTLLIRARVGEAP Trigger: GGGCGCCTCCCCAACCCTGGCCCTGATGAGCAGTGTTAAGGCCCAGCTGCACATGGCACTGGAGAGGAACTCGTGGTTGCAGAAGCGCAT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000045543.8 ENSMUST00000108571.9 ENSMUST00000207974.2 ENSMUST00000208042.2 |
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| CDS-3UTR CAA 90 bp | TCCTGGCTAAGGAGGCCTAGCTGGCAGCCCCTGCGGGGTGAAATGGAGACGGGGTGCCTCTCTCGAGCCTaGGTCTTCCCAAATCGCTTC | + |
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Preference number: 5 (lower is better) Translates to: SWLRRPSWQPLRGEMETGCLSRA*VFPNRF Trigger: GAAGCGATTTGGGAAGACCAAGGCTCGAGAGAGGCA...CCCCGTCTCCATTTCACCCCGCAGGGGCTGCCAGCTAGGCCTCCTTAGCCAGGA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000045543.8 ENSMUST00000108571.9 ENSMUST00000207974.2 |
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| CDS-3UTR CAA 90 bp | TCCTGGCTAAGGAGGCCTAGCTGGCAGCCCCTGCGGGGTGAAATGGAGACGGGGAGAGCCTGCACCTTCTaGAGAGTCTCGTCGTCCAGT | + |
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Preference number: 5 (lower is better) Translates to: SWLRRPSWQPLRGEMETGRACTF*RVSSSS Trigger: ACTGGACGACGAGACTCTCAAGAAGGTGCAGGCTCT...CCCCGTCTCCATTTCACCCCGCAGGGGCTGCCAGCTAGGCCTCCTTAGCCAGGA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000045543.8 ENSMUST00000108571.9 |
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| CDS-3UTR CAA 90 bp | GGCTACTCCTGGCTAAGGAGGCCTAGCTGGCAGCCCCTGCGGGGTGAAATGGAGATGGGCAGGAGCAGCTaGCTCTTCTTGAGAGCCTGC | + |
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Preference number: 5 (lower is better) Translates to: GYSWLRRPSWQPLRGEMEMGRSS*LFLRAC Trigger: GCAGGCTCTCAAGAAGAGCAAGCTGCTCCTGCCCAT...CTCCATTTCACCCCGCAGGGGCTGCCAGCTAGGCCTCCTTAGCCAGGAGTAGCC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000045543.8 ENSMUST00000108571.9 |
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| CDS TCA 90 bp | TCTGCCTCTTCCTTTCACTGGCACTTCCGTCTTCGGAAACCCCGCTaGAGGAGGAGGCTGCCGACTCGGGGTCTGAGGCTTCTCCAACCC | + |
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Preference number: 5 (lower is better) Translates to: SASSFHWHFRLRKPR*RRRLPTRGLRLLQP Trigger: GGGTTGGAGAAGCCTCAGACCCCGAGTCGGCAGCCTCCTCCTTCAGCGGGGTTTCCGAAGACGGAAGTGCCAGTGAAAGGAAGAGGCAGA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000045543.8 ENSMUST00000108571.9 ENSMUST00000207974.2 ENSMUST00000208728.2 |
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| CDS GCA 90 bp | CTCCAGGTCCTCAATGCGCTTCTGCAACCACGAGTTCCTCTCCAGTaGCATGTGCAGCTGGGCCTTAACACTGCTCATCAGGGCCAGGGT | + |
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Preference number: 5 (lower is better) Translates to: LQVLNALLQPRVPLQ*HVQLGLNTAHQGQG Trigger: ACCCTGGCCCTGATGAGCAGTGTTAAGGCCCAGCTGCACATGGCACTGGAGAGGAACTCGTGGTTGCAGAAGCGCATTGAGGACCTGGAG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000045543.8 ENSMUST00000108571.9 ENSMUST00000207974.2 ENSMUST00000208042.2 |
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| CDS GCA 90 bp | CCAGCTGACACCGCAAGAAGTCCCTCTCCTCCTCCAGGTCCTCAATaGGCTTCTGCAACCACGAGTTCCTCTCCAGTGCCATGTGCAGCT | + |
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Preference number: 5 (lower is better) Translates to: PADTARSPSPPPGPQ*ASATTSSSPVPCAA Trigger: AGCTGCACATGGCACTGGAGAGGAACTCGTGGTTGCAGAAGCGCATTGAGGACCTGGAGGAGGAGAGGGACTTCTTGCGGTGTCAGCTGG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000045543.8 ENSMUST00000108571.9 ENSMUST00000207974.2 ENSMUST00000208042.2 |
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| CDS GCA 90 bp | CCCTCAACACACCCATCACATGTACCCACTCCCCACTCACCCCGCTaGCTCTCTCGAGCCTTGGTCTTCCCAAATCGCTTCCGGCTAGTA | + |
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Preference number: 5 (lower is better) Translates to: PSTHPSHVPTPHSPR*LSRALVFPNRFRLV Trigger: TACTAGCCGGAAGCGATTTGGGAAGACCAAGGCTCGAGAGAGGCAGCGGGGTGAGTGGGGAGTGGGTACATGTGATGGGTGTGTTGAGGG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000207974.2 |
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| CDS TCA 90 bp | GCTTCATCCGGCAGTAGTCCTCTGCATCCATCCGGGCAGAGGAAATaGATTTGTCCAGCTGACACCGCAAGAAGTCCCTCTCCTCCTCCA | + |
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Preference number: 5 (lower is better) Translates to: ASSGSSPLHPSGQRK*ICPADTARSPSPPP Trigger: TGGAGGAGGAGAGGGACTTCTTGCGGTGTCAGCTGGACAAATTCATTTCCTCTGCCCGGATGGATGCAGAGGACTACTGCCGGATGAAGC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000045543.8 ENSMUST00000108571.9 ENSMUST00000207974.2 |
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| CDS GCA 90 bp | CGAGCCTTGGTCTTCCCAAATCGCTTCCGGCTAGTACTTCCCTTCTaGTTCTGCCTCTTCCTTTCACTGGCACTTCCGTCTTCGGAAACC | + |
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Preference number: 5 (lower is better) Translates to: RALVFPNRFRLVLPF*FCLFLSLALPSSET Trigger: GGTTTCCGAAGACGGAAGTGCCAGTGAAAGGAAGAGGCAGAAGCAGAAGGGAAGTACTAGCCGGAAGCGATTTGGGAAGACCAAGGCTCG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000045543.8 ENSMUST00000108571.9 ENSMUST00000207974.2 ENSMUST00000208728.2 |
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| CDS-3UTR CAA 90 bp | TGTCTCTTTAATTTAAACTCTCAGAATAATACTCTGTCTTTGCATGGGATGCAGTCATCAGGGCCAGGGTaGGGGAGGCGCCCTCTGGAG | + |
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Preference number: 5 (lower is better) Translates to: CLFNLNSQNNTLSLHGMQSSGPG*GRRPLE Trigger: CTCCAGAGGGCGCCTCCCCAACCCTGGCCCTGATGA...CTGCATCCCATGCAAAGACAGAGTATTATTCTGAGAGTTTAAATTAAAGAGACA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000045543.8 ENSMUST00000108571.9 ENSMUST00000207974.2 |
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| CDS CCA 90 bp | GGTATAAGATTTGTGAGTCTAAGTGGGGTGCCTCTTCAAAGGGAATaGAGATCTCAAAGGTCTCTTCGTCCTTCATTGTCCGCCAACGGT | + |
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Preference number: 5 (lower is better) Translates to: GIRFVSLSGVPLQRE*RSQRSLRPSLSANG Trigger: ACCGTTGGCGGACAATGAAGGACGAAGAGACCTTTGAGATCTCCATTCCCTTTGAAGAGGCACCCCACTTAGACTCACAAATCTTATACC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000045543.8 ENSMUST00000108571.9 ENSMUST00000207974.2 ENSMUST00000208042.2 ENSMUST00000208161.2 |
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| CDS CCA 90 bp | TTTCTCCGAGACGGACTCAGACGGTATAAGATTTGTGAGTCTAAGTaGGGTGCCTCTTCAAAGGGAATGGAGATCTCAAAGGTCTCTTCG | + |
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Preference number: 5 (lower is better) Translates to: FLRDGLRRYKICESK*GASSKGMEISKVSS Trigger: CGAAGAGACCTTTGAGATCTCCATTCCCTTTGAAGAGGCACCCCACTTAGACTCACAAATCTTATACCGTCTGAGTCCGTCTCGGAGAAA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000045543.8 ENSMUST00000108571.9 ENSMUST00000207974.2 ENSMUST00000208042.2 ENSMUST00000208161.2 |
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| CDS-3UTR CAA 90 bp | TGTCTCTTTAATTTAAACTCTCAGAATAATACTCTGTCTTTGCATGGGATGCAGATGGGCAGGAGCAGCTaGCTCTTCTTGAGAGCCTGC | + |
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Preference number: 5 (lower is better) Translates to: CLFNLNSQNNTLSLHGMQMGRSS*LFLRAC Trigger: GCAGGCTCTCAAGAAGAGCAAGCTGCTCCTGCCCAT...CTGCATCCCATGCAAAGACAGAGTATTATTCTGAGAGTTTAAATTAAAGAGACA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000045543.8 ENSMUST00000108571.9 |
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| CDS-3UTR CAA 90 bp | TGTCTCTTTAATTTAAACTCTCAGAATAATACTCTGTCTTTGCATGGGATGCAGAGAGCCTGCACCTTCTaGAGAGTCTCGTCGTCCAGT | + |
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Preference number: 5 (lower is better) Translates to: CLFNLNSQNNTLSLHGMQRACTF*RVSSSS Trigger: ACTGGACGACGAGACTCTCAAGAAGGTGCAGGCTCT...CTGCATCCCATGCAAAGACAGAGTATTATTCTGAGAGTTTAAATTAAAGAGACA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000045543.8 ENSMUST00000108571.9 |
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| CDS CCA 72 bp | ACTGCTCATCAGGGCCAGGGTTGGGGAGGCGCCCTCTaGAGGCTCCTCAACATTTCTCCGAGACGGACTCAG | + |
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Preference number: 6 (lower is better) Translates to: TAHQGQGWGGAL*RLLNISPRRTQ Trigger: CTGAGTCCGTCTCGGAGAAATGTTGAGGAGCCTCCAGAGGGCGCCTCCCCAACCCTGGCCCTGATGAGCAGT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000045543.8 ENSMUST00000108571.9 ENSMUST00000207974.2 ENSMUST00000208042.2 ENSMUST00000208161.2 |
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| CDS TCA 72 bp | TCCTTTCACTGGCACTTCCGTCTTCGGAAACCCCGCTaGAGGAGGAGGCTGCCGACTCGGGGTCTGAGGCTT | + |
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Preference number: 6 (lower is better) Translates to: SFHWHFRLRKPR*RRRLPTRGLRL Trigger: AAGCCTCAGACCCCGAGTCGGCAGCCTCCTCCTTCAGCGGGGTTTCCGAAGACGGAAGTGCCAGTGAAAGGA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000045543.8 ENSMUST00000108571.9 ENSMUST00000207974.2 ENSMUST00000208728.2 |
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| CDS GCA 72 bp | CACCCATCACATGTACCCACTCCCCACTCACCCCGCTaGCTCTCTCGAGCCTTGGTCTTCCCAAATCGCTTC | + |
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Preference number: 6 (lower is better) Translates to: HPSHVPTPHSPR*LSRALVFPNRF Trigger: GAAGCGATTTGGGAAGACCAAGGCTCGAGAGAGGCAGCGGGGTGAGTGGGGAGTGGGTACATGTGATGGGTG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000207974.2 |
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| CDS CCA 72 bp | TTCCTGCAGACCCAGCAACTGAGCCCTTGGGGGCACTaGACAGAAGCAGGTCACCAAAAGTCGGCAGTCCCT | + |
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Preference number: 6 (lower is better) Translates to: FLQTQQLSPWGH*TEAGHQKSAVP Trigger: AGGGACTGCCGACTTTTGGTGACCTGCTTCTGTCCAGTGCCCCCAAGGGCTCAGTTGCTGGGTCTGCAGGAA 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000108571.9 |
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| CDS GCA 72 bp | ACCGCAAGAAGTCCCTCTCCTCCTCCAGGTCCTCAATaGGCTTCTGCAACCACGAGTTCCTCTCCAGTGCCA | + |
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Preference number: 6 (lower is better) Translates to: TARSPSPPPGPQ*ASATTSSSPVP Trigger: TGGCACTGGAGAGGAACTCGTGGTTGCAGAAGCGCATTGAGGACCTGGAGGAGGAGAGGGACTTCTTGCGGT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000045543.8 ENSMUST00000108571.9 ENSMUST00000207974.2 ENSMUST00000208042.2 |
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| CDS TCA 72 bp | GCATCCATCCGGGCAGAGGAAATGAATTTGTCCAGCTaGCACCGCAAGAAGTCCCTCTCCTCCTCCAGGTCC | + |
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Preference number: 6 (lower is better) Translates to: ASIRAEEMNLSS*HRKKSLSSSRS Trigger: GGACCTGGAGGAGGAGAGGGACTTCTTGCGGTGTCAGCTGGACAAATTCATTTCCTCTGCCCGGATGGATGC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000045543.8 ENSMUST00000108571.9 ENSMUST00000207974.2 ENSMUST00000208042.2 |
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| CDS GCA 72 bp | CTCAATGCGCTTCTGCAACCACGAGTTCCTCTCCAGTaGCATGTGCAGCTGGGCCTTAACACTGCTCATCAG | + |
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Preference number: 6 (lower is better) Translates to: LNALLQPRVPLQ*HVQLGLNTAHQ Trigger: CTGATGAGCAGTGTTAAGGCCCAGCTGCACATGGCACTGGAGAGGAACTCGTGGTTGCAGAAGCGCATTGAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000045543.8 ENSMUST00000108571.9 ENSMUST00000207974.2 ENSMUST00000208042.2 |
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| CDS TCA 72 bp | GGCAGTAGTCCTCTGCATCCATCCGGGCAGAGGAAATaGATTTGTCCAGCTGACACCGCAAGAAGTCCCTCT | + |
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Preference number: 6 (lower is better) Translates to: GSSPLHPSGQRK*ICPADTARSPS Trigger: AGAGGGACTTCTTGCGGTGTCAGCTGGACAAATTCATTTCCTCTGCCCGGATGGATGCAGAGGACTACTGCC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000045543.8 ENSMUST00000108571.9 ENSMUST00000207974.2 ENSMUST00000208042.2 |
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| CDS GCA 72 bp | GTCTTCCCAAATCGCTTCCGGCTAGTACTTCCCTTCTaGTTCTGCCTCTTCCTTTCACTGGCACTTCCGTCT | + |
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Preference number: 6 (lower is better) Translates to: VFPNRFRLVLPF*FCLFLSLALPS Trigger: AGACGGAAGTGCCAGTGAAAGGAAGAGGCAGAAGCAGAAGGGAAGTACTAGCCGGAAGCGATTTGGGAAGAC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000045543.8 ENSMUST00000108571.9 ENSMUST00000207974.2 ENSMUST00000208728.2 |
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| CDS CAA 90 bp | ATGGAGATCTCAAAGGTCTCTTCGTCCTTCATTGTCCGCCAACGGTaGTTTCTGTCATTCATATCGAGGAGGCTTCCTGCAGACCCAGCA | + |
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Preference number: 6 (lower is better) Translates to: MEISKVSSSFIVRQR*FLSFISRRLPADPA Trigger: TGCTGGGTCTGCAGGAAGCCTCCTCGATATGAATGACAGAAACAACCGTTGGCGGACAATGAAGGACGAAGAGACCTTTGAGATCTCCAT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000108571.9 |
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| CDS CAA 90 bp | CCTCTTCAAAGGGAATGGAGATCTCAAAGGTCTCTTCGTCCTTCATaGTCCGCCAACGGTTGTTTCTGTCATTCATATCGAGGAGGCTTC | + |
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Preference number: 6 (lower is better) Translates to: PLQREWRSQRSLRPS*SANGCFCHSYRGGF Trigger: GAAGCCTCCTCGATATGAATGACAGAAACAACCGTTGGCGGACAATGAAGGACGAAGAGACCTTTGAGATCTCCATTCCCTTTGAAGAGG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000108571.9 |
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| CDS CCA 72 bp | GACGGACTCAGACGGTATAAGATTTGTGAGTCTAAGTaGGGTGCCTCTTCAAAGGGAATGGAGATCTCAAAG | + |
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Preference number: 6 (lower is better) Translates to: DGLRRYKICESK*GASSKGMEISK Trigger: CTTTGAGATCTCCATTCCCTTTGAAGAGGCACCCCACTTAGACTCACAAATCTTATACCGTCTGAGTCCGTC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000045543.8 ENSMUST00000108571.9 ENSMUST00000207974.2 ENSMUST00000208042.2 ENSMUST00000208161.2 |
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| CDS CAA 72 bp | AGGGAATGGAGATCTCAAAGGTCTCTTCGTCCTTCATaGTCCGCCAACGGTTGTTTCTGTCATTCATATCGA | + |
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Preference number: 6 (lower is better) Translates to: REWRSQRSLRPS*SANGCFCHSYR Trigger: TCGATATGAATGACAGAAACAACCGTTGGCGGACAATGAAGGACGAAGAGACCTTTGAGATCTCCATTCCCT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000108571.9 |
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