Pregenerated sensors for CCDC102A (Mus musculus)
Ensembl gene IDs: ENSMUSG00000063605Ensembl transcript IDs: ENSMUST00000077955.6, ENSMUST00000162020.2
Found 133 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | GAGAGCTTCAAGTCCATTTATTACAAAAGTCTGAGTTCATGTTCATaGTATCTTACTATGAATAGCCCCTTCCAGACCACCAAGCCTCCC | + |
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Preference number: 1 (lower is better) Translates to: ESFKSIYYKSLSSCS*YLTMNSPFQTTKPP Trigger: GGGAGGCTTGGTGGTCTGGAAGGGGCTATTCATAGTAAGATACCATGAACATGAACTCAGACTTTTGTAATAAATGGACTTGAAGCTCTC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000077955.6 |
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| 3UTR-3UTR CCA 90 bp | GCCCCTTCCAGACCACCAAGCCTCCCTCACCATGTTCCATCTCTGCACGAAGTCTGGGCATCTGTGCTTTaGGGTCGGTCCTCTTCCACC | + |
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Preference number: 2 (lower is better) Translates to: APSRPPSLPHHVPSLHEVWASVL*GRSSST Trigger: GGTGGAAGAGGACCGACCCCAAAGCACAGATGCCCA...GACTTCGTGCAGAGATGGAACATGGTGAGGGAGGCTTGGTGGTCTGGAAGGGGC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000077955.6 |
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| 3UTR CAA 90 bp | GTGGAACCCAAGTGCGTACAGACAGCGAAAGATGGCTGTCAGGGTTaGAGAGGATGCTCCGCTGGGCATCTGTGCTTTGGGGTCGGTCCT | + |
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Preference number: 2 (lower is better) Translates to: VEPKCVQTAKDGCQG*RGCSAGHLCFGVGP Trigger: AGGACCGACCCCAAAGCACAGATGCCCAGCGGAGCATCCTCTCAAACCCTGACAGCCATCTTTCGCTGTCTGTACGCACTTGGGTTCCAC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000077955.6 |
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| 3UTR-3UTR GCA 90 bp | GGTCTTAAGATCTGGGTGCTGGGCTGTCAGTTGGGTCCAAGCAACCCTGGGCATCAGGGTTTGAGAGGATaGTCCGCTGGGCATCTGTGC | + |
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Preference number: 2 (lower is better) Translates to: GLKIWVLGCQLGPSNPGHQGLRG*SAGHLC Trigger: GCACAGATGCCCAGCGGAGCATCCTCTCAAACCCTG...ATGCCCAGGGTTGCTTGGACCCAACTGACAGCCCAGCACCCAGATCTTAAGACC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000077955.6 |
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| 3UTR-3UTR CCA 90 bp | AAGATCTGGGTGCTGGGCTGTCAGTTGGGTCCAAGCAACCCTGGGCATATATACAAACTCCCGCTTTCCTaGGAGAGAAGGAAGTGGTTT | + |
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Preference number: 2 (lower is better) Translates to: KIWVLGCQLGPSNPGHIYKLPLS*ERRKWF Trigger: AAACCACTTCCTTCTCTCCCAGGAAAGCGGGAGTTT...GTATATATGCCCAGGGTTGCTTGGACCCAACTGACAGCCCAGCACCCAGATCTT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000077955.6 |
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| 3UTR-3UTR CCA 90 bp | CTTCCAGACCACCAAGCCTCCCTCACCATGTTCCATCTCTGCACGAAGTCTTGTGGGTCCAAGCAACCCTaGGCATATATACAATATACA | + |
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Preference number: 2 (lower is better) Translates to: LPDHQASLTMFHLCTKSCGSKQP*AYIQYT Trigger: TGTATATTGTATATATGCCCAGGGTTGCTTGGACCC...ACAAGACTTCGTGCAGAGATGGAACATGGTGAGGGAGGCTTGGTGGTCTGGAAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000077955.6 |
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| 3UTR-3UTR CCA 90 bp | CTGGGCTGTCAGTTGGGTCCAAGCAACCCTGGGCATATATACAATATACATATCACAGACAGCGAAAGATaGCTGTCAGGGTTTGAGAGG | + |
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Preference number: 2 (lower is better) Translates to: LGCQLGPSNPGHIYNIHITDSER*LSGFER Trigger: CCTCTCAAACCCTGACAGCCATCTTTCGCTGTCTGT...GATATGTATATTGTATATATGCCCAGGGTTGCTTGGACCCAACTGACAGCCCAG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000077955.6 |
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| 3UTR CCA 72 bp | GGGGGTGGAACCCAAGTGCGTACAGACAGCGAAAGATaGCTGTCAGGGTTTGAGAGGATGCTCCGCTGGGCA | + |
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Preference number: 3 (lower is better) Translates to: GGGTQVRTDSER*LSGFERMLRWA Trigger: TGCCCAGCGGAGCATCCTCTCAAACCCTGACAGCCATCTTTCGCTGTCTGTACGCACTTGGGTTCCACCCCC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000077955.6 |
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| 3UTR GCA 72 bp | ACGAAGTCTTGTGCAGGTGGGGTCTTAAGATCTGGGTaGTGGGCTGTCAGTTGGGTCCAAGCAACCCTGGGC | + |
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Preference number: 3 (lower is better) Translates to: TKSCAGGVLRSG*WAVSWVQATLG Trigger: GCCCAGGGTTGCTTGGACCCAACTGACAGCCCAGCACCCAGATCTTAAGACCCCACCTGCACAAGACTTCGT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000077955.6 |
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| 3UTR CCA 72 bp | GAAAGATGGCTGTCAGGGTTTGAGAGGATGCTCCGCTaGGCATCTGTGCTTTGGGGTCGGTCCTCTTCCACC | + |
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Preference number: 3 (lower is better) Translates to: ERWLSGFERMLR*ASVLWGRSSST Trigger: GGTGGAAGAGGACCGACCCCAAAGCACAGATGCCCAGCGGAGCATCCTCTCAAACCCTGACAGCCATCTTTC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000077955.6 |
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| 3UTR TCA 72 bp | AGTGCGTACAGACAGCGAAAGATGGCTGTCAGGGTTTaGGAGGATGCTCCGCTGGGCATCTGTGCTTTGGGG | + |
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Preference number: 3 (lower is better) Translates to: SAYRQRKMAVRV*EDAPLGICALG Trigger: CCCCAAAGCACAGATGCCCAGCGGAGCATCCTCTCAAACCCTGACAGCCATCTTTCGCTGTCTGTACGCACT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000077955.6 |
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| 3UTR TCA 72 bp | ATCCAACAGGCTCCCCCTTCACAGGGGTGTGATAGGTaGAACTCCCGCTTTCCTGGGAGAGAAGGAAGTGGT | + |
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Preference number: 3 (lower is better) Translates to: IQQAPPSQGCDR*NSRFPGREGSG Trigger: ACCACTTCCTTCTCTCCCAGGAAAGCGGGAGTTTCACCTATCACACCCCTGTGAAGGGGGAGCCTGTTGGAT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000077955.6 |
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| 3UTR CCA 72 bp | AAGTCTTGTGCAGGTGGGGTCTTAAGATCTGGGTGCTaGGCTGTCAGTTGGGTCCAAGCAACCCTGGGCATA | + |
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Preference number: 3 (lower is better) Translates to: KSCAGGVLRSGC*AVSWVQATLGI Trigger: TATGCCCAGGGTTGCTTGGACCCAACTGACAGCCCAGCACCCAGATCTTAAGACCCCACCTGCACAAGACTT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000077955.6 |
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| 3UTR CCA 72 bp | CTGGGTGCTGGGCTGTCAGTTGGGTCCAAGCAACCCTaGGCATATATACAATATACATATCCAACAGGCTCC | + |
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Preference number: 3 (lower is better) Translates to: LGAGLSVGSKQP*AYIQYTYPTGS Trigger: GGAGCCTGTTGGATATGTATATTGTATATATGCCCAGGGTTGCTTGGACCCAACTGACAGCCCAGCACCCAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000077955.6 |
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| CDS-3UTR GCA 90 bp | GCCCCTTCCAGACCACCAAGCCTCCCTCACCATGTTCCATCTCTGCACGAAGTCGACCCGAGGGCCCCCTaGTGCTACACTGCAGGCATC | + |
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Preference number: 4 (lower is better) Translates to: APSRPPSLPHHVPSLHEVDPRAP*CYTAGI Trigger: GATGCCTGCAGTGTAGCAGCAGGGGGCCCTCGGGTC...GACTTCGTGCAGAGATGGAACATGGTGAGGGAGGCTTGGTGGTCTGGAAGGGGC 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000077955.6 |
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| CDS-3UTR GCA 90 bp | GGTCTTAAGATCTGGGTGCTGGGCTGTCAGTTGGGTCCAAGCAACCCTGGGCATTCTCCAGCCGCTCTCTaGGGCCCCACTCGGCCGCAT | + |
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Preference number: 4 (lower is better) Translates to: GLKIWVLGCQLGPSNPGHSPAAL*GPTRPH Trigger: ATGCGGCCGAGTGGGGCCGCAGAGAGCGGCTGGAGA...ATGCCCAGGGTTGCTTGGACCCAACTGACAGCCCAGCACCCAGATCTTAAGACC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000077955.6 |
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| CDS-3UTR CCA 90 bp | GATGCTCCGCTGGGCATCTGTGCTTTGGGGTCGGTCCTCTTCCACCCTGGATGTTGCAGCTTCCGTGCCTaGTTGTGGGCCTCGTCCAGC | + |
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Preference number: 4 (lower is better) Translates to: DAPLGICALGSVLFHPGCCSFRA*LWASSS Trigger: GCTGGACGAGGCCCACAACCAGGCACGGAAGCTGCA...ACATCCAGGGTGGAAGAGGACCGACCCCAAAGCACAGATGCCCAGCGGAGCATC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000077955.6 |
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| CDS-3UTR TCA 90 bp | GGTCTTAAGATCTGGGTGCTGGGCTGTCAGTTGGGTCCAAGCAACCCTGGGCATGCAGCCGCAGCTTCTTaGCCTCCGTCTCGTGCTGCT | + |
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Preference number: 4 (lower is better) Translates to: GLKIWVLGCQLGPSNPGHAAAAS*PPSRAA Trigger: AGCAGCACGAGACGGAGGTCAAGAAGCTGCGGCTGC...ATGCCCAGGGTTGCTTGGACCCAACTGACAGCCCAGCACCCAGATCTTAAGACC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000077955.6 |
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| CDS-3UTR GCA 90 bp | GGTCTTAAGATCTGGGTGCTGGGCTGTCAGTTGGGTCCAAGCAACCCTGGGCATGGTGCGTTTTGCTGCTaGCTGCGGAGCCTGGACTGC | + |
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Preference number: 4 (lower is better) Translates to: GLKIWVLGCQLGPSNPGHGAFCC*LRSLDC Trigger: GCAGTCCAGGCTCCGCAGGCAGCAGCAAAACGCACC...ATGCCCAGGGTTGCTTGGACCCAACTGACAGCCCAGCACCCAGATCTTAAGACC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000077955.6 |
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| CDS-3UTR GCA 90 bp | GGTCTTAAGATCTGGGTGCTGGGCTGTCAGTTGGGTCCAAGCAACCCTGGGCATAGGGGTGCGTTTTGCTaGTGCCTGCGGAGCCTGGAC | + |
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Preference number: 4 (lower is better) Translates to: GLKIWVLGCQLGPSNPGHRGAFC*CLRSLD Trigger: GTCCAGGCTCCGCAGGCAGCAGCAAAACGCACCCCT...ATGCCCAGGGTTGCTTGGACCCAACTGACAGCCCAGCACCCAGATCTTAAGACC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000077955.6 |
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| CDS-3UTR TCA 90 bp | AAGATCTGGGTGCTGGGCTGTCAGTTGGGTCCAAGCAACCCTGGGCATATATACCCGCCAACTCCTTGGTaGGCGTATCCAGGCGCTGGC | + |
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Preference number: 4 (lower is better) Translates to: KIWVLGCQLGPSNPGHIYPPTPW*AYPGAG Trigger: GCCAGCGCCTGGATACGCTCACCAAGGAGTTGGCGG...GTATATATGCCCAGGGTTGCTTGGACCCAACTGACAGCCCAGCACCCAGATCTT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000077955.6 |
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| CDS-3UTR CCA 90 bp | GGTCTTAAGATCTGGGTGCTGGGCTGTCAGTTGGGTCCAAGCAACCCTGGGCATTTCCGTGCCTGGTTGTaGGCCTCGTCCAGCTCATCC | + |
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Preference number: 4 (lower is better) Translates to: GLKIWVLGCQLGPSNPGHFRAWL*ASSSSS Trigger: GGATGAGCTGGACGAGGCCCACAACCAGGCACGGAA...ATGCCCAGGGTTGCTTGGACCCAACTGACAGCCCAGCACCCAGATCTTAAGACC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000077955.6 |
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| CDS-3UTR TCA 90 bp | GGGCTGTCAGTTGGGTCCAAGCAACCCTGGGCATATATACAATATACATATCCAGCCTCGCACTCGCCCTaGGCCTCCTGGCGCTCACGG | + |
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Preference number: 4 (lower is better) Translates to: GLSVGSKQPWAYIQYTYPASHSP*ASWRSR Trigger: CCGTGAGCGCCAGGAGGCTCAGGGCGAGTGCGAGGC...TGGATATGTATATTGTATATATGCCCAGGGTTGCTTGGACCCAACTGACAGCCC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000077955.6 |
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| CDS-3UTR TCA 90 bp | AAGATCTGGGTGCTGGGCTGTCAGTTGGGTCCAAGCAACCCTGGGCATATATACGGGCCAGCTCTTTCTTaGGCTCTTCCACCCGCAGCC | + |
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Preference number: 4 (lower is better) Translates to: KIWVLGCQLGPSNPGHIYGPALS*ALPPAA Trigger: GGCTGCGGGTGGAAGAGCTCAAGAAAGAGCTGGCCC...GTATATATGCCCAGGGTTGCTTGGACCCAACTGACAGCCCAGCACCCAGATCTT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000077955.6 |
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| CDS-3UTR GCA 90 bp | GGTCTTAAGATCTGGGTGCTGGGCTGTCAGTTGGGTCCAAGCAACCCTGGGCATATTGTTTTCTCCATCTaGAAGGCTCGCGCGCGCGCC | + |
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Preference number: 4 (lower is better) Translates to: GLKIWVLGCQLGPSNPGHIVFSI*KARARA Trigger: GGCGCGCGCGCGAGCCTTGCAGATGGAGAAAACAAT...ATGCCCAGGGTTGCTTGGACCCAACTGACAGCCCAGCACCCAGATCTTAAGACC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000077955.6 |
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| CDS-3UTR GCA 90 bp | TGGGCTGTCAGTTGGGTCCAAGCAACCCTGGGCATATATACAATATACATATCCCTTCCCGCGCACGGTTaGGCTCGGCGCGCACCTTGC | + |
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Preference number: 4 (lower is better) Translates to: WAVSWVQATLGIYTIYISLPAHG*ARRAPC Trigger: GCAAGGTGCGCGCCGAGCGCAACCGTGCGCGGGAAG...GGATATGTATATTGTATATATGCCCAGGGTTGCTTGGACCCAACTGACAGCCCA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000077955.6 |
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| CDS-3UTR GCA 90 bp | CTTCCAGACCACCAAGCCTCCCTCACCATGTTCCATCTCTGCACGAAGTCTTGTTCGTCCAGGGACCGTTaGAGCTTCCGTGCCTGGTTG | + |
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Preference number: 4 (lower is better) Translates to: LPDHQASLTMFHLCTKSCSSRDR*SFRAWL Trigger: CAACCAGGCACGGAAGCTGCAACGGTCCCTGGACGA...ACAAGACTTCGTGCAGAGATGGAACATGGTGAGGGAGGCTTGGTGGTCTGGAAG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000077955.6 |
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| CDS-3UTR CCA 90 bp | TGCTGGGCTGTCAGTTGGGTCCAAGCAACCCTGGGCATATATACAATATACATAAGGCGCTGGCGCAGCTaGCGCACCTCTTCCCGCGCA | + |
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Preference number: 4 (lower is better) Translates to: CWAVSWVQATLGIYTIYIRRWRS*RTSSRA Trigger: TGCGCGGGAAGAGGTGCGCCAGCTGCGCCAGCGCCT...TATGTATATTGTATATATGCCCAGGGTTGCTTGGACCCAACTGACAGCCCAGCA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000077955.6 |
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| CDS-3UTR GCA 90 bp | GGTCCAAGCAACCCTGGGCATATATACAATATACATATCCAACAGGCTCCCCCTGCTCGGCGCGCACCTTaGTCCACTTCTCGCGCCAGT | + |
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Preference number: 4 (lower is better) Translates to: GPSNPGHIYNIHIQQAPPARRAP*STSRAS Trigger: ACTGGCGCGAGAAGTGGAGCAAGGTGCGCGCCGAGC...AGGGGGAGCCTGTTGGATATGTATATTGTATATATGCCCAGGGTTGCTTGGACC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000077955.6 |
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| CDS-3UTR GCA 90 bp | CAACCCTGGGCATATATACAATATACATATCCAACAGGCTCCCCCTTCACAGGGGCGCCGATTGGCGTGTaGCAGCTCGGCCACCTTCTC | + |
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Preference number: 4 (lower is better) Translates to: QPWAYIQYTYPTGSPFTGAPIGV*QLGHLL Trigger: GAGAAGGTGGCCGAGCTGGCACACGCCAATCGGCGC...CCCTGTGAAGGGGGAGCCTGTTGGATATGTATATTGTATATATGCCCAGGGTTG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000077955.6 |
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| CDS-3UTR CCA 90 bp | GGTCCAAGCAACCCTGGGCATATATACAATATACATATCCAACAGGCTCCCCCTAGCGTATCCAGGCGCTaGCGCAGCTGGCGCACCTCT | + |
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Preference number: 4 (lower is better) Translates to: GPSNPGHIYNIHIQQAPPSVSRR*RSWRTS Trigger: AGAGGTGCGCCAGCTGCGCCAGCGCCTGGATACGCT...AGGGGGAGCCTGTTGGATATGTATATTGTATATATGCCCAGGGTTGCTTGGACC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000077955.6 |
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| CDS-3UTR CCA 90 bp | ATAGCCCCTTCCAGACCACCAAGCCTCCCTCACCATGTTCCATCTCTGCACGAACATCCTCTTCTGTACTaGCTGTGTCCTCCCAGGGCA | + |
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Preference number: 4 (lower is better) Translates to: IAPSRPPSLPHHVPSLHEHPLLY*LCPPRA Trigger: TGCCCTGGGAGGACACAGCCAGTACAGAAGAGGATG...TTCGTGCAGAGATGGAACATGGTGAGGGAGGCTTGGTGGTCTGGAAGGGGCTAT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000077955.6 |
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| CDS-3UTR CCA 90 bp | GATGCTCCGCTGGGCATCTGTGCTTTGGGGTCGGTCCTCTTCCACCCTGGATGTTATTTGATCTTCCATTaGCTAAGCTCCCCCTCCAGC | + |
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Preference number: 4 (lower is better) Translates to: DAPLGICALGSVLFHPGCYLIFH*LSSPSS Trigger: GCTGGAGGGGGAGCTTAGCCAATGGAAGATCAAATA...ACATCCAGGGTGGAAGAGGACCGACCCCAAAGCACAGATGCCCAGCGGAGCATC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000077955.6 |
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| CDS-3UTR CCA 90 bp | GGGCTGTCAGTTGGGTCCAAGCAACCCTGGGCATATATACAATATACATATCCAGCTCCACGCGCCGATTaGCGTGTGCCAGCTCGGCCA | + |
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Preference number: 4 (lower is better) Translates to: GLSVGSKQPWAYIQYTYPAPRAD*RVPARP Trigger: TGGCCGAGCTGGCACACGCCAATCGGCGCGTGGAGC...TGGATATGTATATTGTATATATGCCCAGGGTTGCTTGGACCCAACTGACAGCCC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000077955.6 |
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| 3UTR CAA 72 bp | AAGTGCGTACAGACAGCGAAAGATGGCTGTCAGGGTTaGAGAGGATGCTCCGCTGGGCATCTGTGCTTTGGG | + |
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Preference number: 4 (lower is better) Translates to: KCVQTAKDGCQG*RGCSAGHLCFG Trigger: CCCAAAGCACAGATGCCCAGCGGAGCATCCTCTCAAACCCTGACAGCCATCTTTCGCTGTCTGTACGCACTT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000077955.6 |
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| CDS-3UTR GCA 90 bp | CTGGGCATATATACAATATACATATCCAACAGGCTCCCCCTTCACAGGGGTGTGCTGCGGAGCCTGGACTaGAGGTGTTCCAGCTGCACC | + |
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Preference number: 4 (lower is better) Translates to: LGIYTIYISNRLPLHRGVLRSLD*RCSSCT Trigger: GGTGCAGCTGGAACACCTGCAGTCCAGGCTCCGCAG...CACACCCCTGTGAAGGGGGAGCCTGTTGGATATGTATATTGTATATATGCCCAG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000077955.6 |
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| CDS-3UTR TCA 90 bp | TGCTGGGCTGTCAGTTGGGTCCAAGCAACCCTGGGCATATATACAATATACATAGGCTGCCCAGGATGGTaGGCAGGCTGCTCTTGGACA | + |
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Preference number: 4 (lower is better) Translates to: CWAVSWVQATLGIYTIYIGCPGW*AGCSWT Trigger: TGTCCAAGAGCAGCCTGCTCACCATCCTGGGCAGCC...TATGTATATTGTATATATGCCCAGGGTTGCTTGGACCCAACTGACAGCCCAGCA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000077955.6 |
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| CDS-3UTR CCA 90 bp | TCATGGTATCTTACTATGAATAGCCCCTTCCAGACCACCAAGCCTCCCTCACCAGCCGCATTCTCTGCCTaGAGCCTTTCCATCTCACCC | + |
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Preference number: 4 (lower is better) Translates to: SWYLTMNSPFQTTKPPSPAAFSA*SLSISP Trigger: GGGTGAGATGGAAAGGCTCCAGGCAGAGAATGCGGC...TGGTGAGGGAGGCTTGGTGGTCTGGAAGGGGCTATTCATAGTAAGATACCATGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000077955.6 |
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| CDS-3UTR CCA 90 bp | CTGGGCTGTCAGTTGGGTCCAAGCAACCCTGGGCATATATACAATATACATATCGCCCTCAGGCTCCTCTaGTCTGCTCTTCAGCAGGCT | + |
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Preference number: 4 (lower is better) Translates to: LGCQLGPSNPGHIYNIHIALRLL*SALQQA Trigger: AGCCTGCTGAAGAGCAGACCAGAGGAGCCTGAGGGC...GATATGTATATTGTATATATGCCCAGGGTTGCTTGGACCCAACTGACAGCCCAG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000077955.6 |
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| CDS-3UTR GCA 90 bp | ATAGCCCCTTCCAGACCACCAAGCCTCCCTCACCATGTTCCATCTCTGCACGAAGCTTCTCGATGTTTTTaGTCAGAGCCAGCTTATCCT | + |
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Preference number: 4 (lower is better) Translates to: IAPSRPPSLPHHVPSLHEASRCF*SEPAYP Trigger: AGGATAAGCTGGCTCTGAGCAAAAACATCGAGAAGC...TTCGTGCAGAGATGGAACATGGTGAGGGAGGCTTGGTGGTCTGGAAGGGGCTAT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000077955.6 |
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| CDS-3UTR GCA 90 bp | CAACCCTGGGCATATATACAATATACATATCCAACAGGCTCCCCCTTCACAGGGCAGGTCTCCAACCTGTaGGCGCAGCTTCTTGTTCTC | + |
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Preference number: 4 (lower is better) Translates to: QPWAYIQYTYPTGSPFTGQVSNL*AQLLVL Trigger: GAGAACAAGAAGCTGCGCGCACAGGTTGGAGACCTG...CCCTGTGAAGGGGGAGCCTGTTGGATATGTATATTGTATATATGCCCAGGGTTG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000077955.6 |
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| CDS-3UTR GCA 90 bp | AAGCAACCCTGGGCATATATACAATATACATATCCAACAGGCTCCCCCTTCACACGTTTTGCTGCTGCCTaGGGAGCCTGGACTGCAGGT | + |
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Preference number: 4 (lower is better) Translates to: KQPWAYIQYTYPTGSPFTRFAAA*GAWTAG Trigger: ACCTGCAGTCCAGGCTCCGCAGGCAGCAGCAAAACG...TGTGAAGGGGGAGCCTGTTGGATATGTATATTGTATATATGCCCAGGGTTGCTT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000077955.6 |
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| CDS-3UTR CCA 90 bp | CAACCCTGGGCATATATACAATATACATATCCAACAGGCTCCCCCTTCACAGGGAGCTCATCCTCTGCCTaGGCCAGCTCTTTCTTGAGC | + |
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Preference number: 4 (lower is better) Translates to: QPWAYIQYTYPTGSPFTGSSSSA*ASSFLS Trigger: GCTCAAGAAAGAGCTGGCCCAGGCAGAGGATGAGCT...CCCTGTGAAGGGGGAGCCTGTTGGATATGTATATTGTATATATGCCCAGGGTTG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000077955.6 |
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| CDS-3UTR TCA 90 bp | GGTCCAAGCAACCCTGGGCATATATACAATATACATATCCAACAGGCTCCCCCTTATCCTCTCGCTCCTTaGGGAGCACTTTCTGGGACT | + |
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Preference number: 4 (lower is better) Translates to: GPSNPGHIYNIHIQQAPPYPLAP*GALSGT Trigger: AGTCCCAGAAAGTGCTCCTCAAGGAGCGAGAGGATA...AGGGGGAGCCTGTTGGATATGTATATTGTATATATGCCCAGGGTTGCTTGGACC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000077955.6 |
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| CDS-3UTR GCA 90 bp | GCTGGGCTGTCAGTTGGGTCCAAGCAACCCTGGGCATATATACAATATACATATTGCAGGTGTTCCAGCTaGACCTGTAGGTTCTCGCTC | + |
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Preference number: 4 (lower is better) Translates to: AGLSVGSKQPWAYIQYTYCRCSS*TCRFSL Trigger: GAGCGAGAACCTACAGGTGCAGCTGGAACACCTGCA...ATATGTATATTGTATATATGCCCAGGGTTGCTTGGACCCAACTGACAGCCCAGC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000077955.6 |
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| CDS-3UTR CCA 90 bp | GGGCTGTCAGTTGGGTCCAAGCAACCCTGGGCATATATACAATATACATATCCACGGCCCAACTCATCCTaGTGCGTCTCCTTTAGGATG | + |
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Preference number: 4 (lower is better) Translates to: GLSVGSKQPWAYIQYTYPRPNSS*CVSFRM Trigger: CATCCTAAAGGAGACGCACCAGGATGAGTTGGGCCG...TGGATATGTATATTGTATATATGCCCAGGGTTGCTTGGACCCAACTGACAGCCC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000077955.6 |
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| CDS-3UTR TCA 90 bp | GCTGGGCTGTCAGTTGGGTCCAAGCAACCCTGGGCATATATACAATATACATATCTTGAAACTGCTTCTTaGGTTTGCCGTGCACGTGCT | + |
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Preference number: 4 (lower is better) Translates to: AGLSVGSKQPWAYIQYTYLETAS*VCRARA Trigger: AGCACGTGCACGGCAAACTCAAGAAGCAGTTTCAAG...ATATGTATATTGTATATATGCCCAGGGTTGCTTGGACCCAACTGACAGCCCAGC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000077955.6 |
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| CDS-3UTR TCA 90 bp | TGGGCTGTCAGTTGGGTCCAAGCAACCCTGGGCATATATACAATATACATATCCTCGGCCACCTTCTCTTaGAACTGCTTCTTGAGTTTG | + |
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Preference number: 4 (lower is better) Translates to: WAVSWVQATLGIYTIYISSATFS*NCFLSL Trigger: CAAACTCAAGAAGCAGTTTCAAGAGAAGGTGGCCGA...GGATATGTATATTGTATATATGCCCAGGGTTGCTTGGACCCAACTGACAGCCCA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000077955.6 |
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| CDS-3UTR GCA 90 bp | GCTGGGCTGTCAGTTGGGTCCAAGCAACCCTGGGCATATATACAATATACATATTGTTTGAGCATCTCCTaGTTGGTCTTGCTCAACTCC | + |
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Preference number: 4 (lower is better) Translates to: AGLSVGSKQPWAYIQYTYCLSIS*LVLLNS Trigger: GGAGTTGAGCAAGACCAAGCAGGAGATGCTCAAACA...ATATGTATATTGTATATATGCCCAGGGTTGCTTGGACCCAACTGACAGCCCAGC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000077955.6 |
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| CDS-3UTR GCA 90 bp | GGGCTGTCAGTTGGGTCCAAGCAACCCTGGGCATATATACAATATACATATCCACACGTGCTTCAGATCTaGCAGTTCCTTGTTCTTCTC | + |
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Preference number: 4 (lower is better) Translates to: GLSVGSKQPWAYIQYTYPHVLQI*QFLVLL Trigger: GAGAAGAACAAGGAACTGGCAGATCTGAAGCACGTG...TGGATATGTATATTGTATATATGCCCAGGGTTGCTTGGACCCAACTGACAGCCC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000077955.6 |
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| CDS TCA 90 bp | CCTGAGCCTCCTGGCGCTCACGGCGCGCGCCCGCCAACTCCTTGGTaGGCGTATCCAGGCGCTGGCGCAGCTGGCGCACCTCTTCCCGCG | + |
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Preference number: 5 (lower is better) Translates to: PEPPGAHGARPPTPW*AYPGAGAAGAPLPA Trigger: CGCGGGAAGAGGTGCGCCAGCTGCGCCAGCGCCTGGATACGCTCACCAAGGAGTTGGCGGGCGCGCGCCGTGAGCGCCAGGAGGCTCAGG 73% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000077955.6 |
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| CDS CCA 90 bp | TCACGGCGCGCGCCCGCCAACTCCTTGGTGAGCGTATCCAGGCGCTaGCGCAGCTGGCGCACCTCTTCCCGCGCACGGTTGCGCTCGGCG | + |
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Preference number: 5 (lower is better) Translates to: SRRAPANSLVSVSRR*RSWRTSSRARLRSA Trigger: CGCCGAGCGCAACCGTGCGCGGGAAGAGGTGCGCCAGCTGCGCCAGCGCCTGGATACGCTCACCAAGGAGTTGGCGGGCGCGCGCCGTGA 73% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000077955.6 |
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| CDS TCA 90 bp | AGTCGGCCGGGCCCATGCGCTCCGGGGACGGGCTGCCCAGGATGGTaGGCAGGCTGCTCTTGGACAGCTGCGGAGACTCAGCCAGCCGCG | + |
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Preference number: 5 (lower is better) Translates to: SRPGPCAPGTGCPGW*AGCSWTAAETQPAA Trigger: CGCGGCTGGCTGAGTCTCCGCAGCTGTCCAAGAGCAGCCTGCTCACCATCCTGGGCAGCCCGTCCCCGGAGCGCATGGGCCCGGCCGACT 72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000077955.6 |
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| CDS CCA 90 bp | GCGCCCGCCAACTCCTTGGTGAGCGTATCCAGGCGCTGGCGCAGCTaGCGCACCTCTTCCCGCGCACGGTTGCGCTCGGCGCGCACCTTG | + |
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Preference number: 5 (lower is better) Translates to: APANSLVSVSRRWRS*RTSSRARLRSARTL Trigger: CAAGGTGCGCGCCGAGCGCAACCGTGCGCGGGAAGAGGTGCGCCAGCTGCGCCAGCGCCTGGATACGCTCACCAAGGAGTTGGCGGGCGC 72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000077955.6 |
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| CDS TCA 90 bp | ACTGGCTGTGTCCTCCCAGGGCAGGCGGTTGCGATCCTGGCGTCCTaGGCTGACCCGAGGGCCCCCTGCTGCTACACTGCAGGCATCCCA | + |
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Preference number: 5 (lower is better) Translates to: TGCVLPGQAVAILAS*ADPRAPCCYTAGIP Trigger: TGGGATGCCTGCAGTGTAGCAGCAGGGGGCCCTCGGGTCAGCTCAGGACGCCAGGATCGCAACCGCCTGCCCTGGGAGGACACAGCCAGT 68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000077955.6 |
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| CDS GCA 90 bp | TGGCCCTCAGGTCACAGTCCAGGGCACTGGCATTCTGCCGCCGTCTaGGGGCCAGAGCCTCCTCCAGGTCTCCAACCTGTGCGCGCAGCT | + |
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Preference number: 5 (lower is better) Translates to: WPSGHSPGHWHSAAV*GPEPPPGLQPVRAA Trigger: AGCTGCGCGCACAGGTTGGAGACCTGGAGGAGGCTCTGGCCCGCAGACGGCGGCAGAATGCCAGTGCCCTGGACTGTGACCTGAGGGCCA 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000077955.6 |
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| CDS GCA 90 bp | GCAGCCTGGCTGGCCCTCAGGTCACAGTCCAGGGCACTGGCATTCTaGCGCCGTCTGCGGGCCAGAGCCTCCTCCAGGTCTCCAACCTGT | + |
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Preference number: 5 (lower is better) Translates to: AAWLALRSQSRALAF*RRLRARASSRSPTC Trigger: ACAGGTTGGAGACCTGGAGGAGGCTCTGGCCCGCAGACGGCGGCAGAATGCCAGTGCCCTGGACTGTGACCTGAGGGCCAGCCAGGCTGC 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000077955.6 |
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| CDS GCA 90 bp | AGCTCTTCCACCCGCAGCCGCAGCTTCTTGACCTCCGTCTCGTGCTaGTCCACGCGCCGATTGGCGTGTGCCAGCTCGGCCACCTTCTCT | + |
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Preference number: 5 (lower is better) Translates to: SSSTRSRSFLTSVSC*STRRLACASSATFS Trigger: AGAGAAGGTGGCCGAGCTGGCACACGCCAATCGGCGCGTGGAGCAGCACGAGACGGAGGTCAAGAAGCTGCGGCTGCGGGTGGAAGAGCT 66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000077955.6 |
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| CDS GCA 90 bp | TTGAGCTCTTCCACCCGCAGCCGCAGCTTCTTGACCTCCGTCTCGTaGTGCTCCACGCGCCGATTGGCGTGTGCCAGCTCGGCCACCTTC | + |
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Preference number: 5 (lower is better) Translates to: LSSSTRSRSFLTSVS*CSTRRLACASSATF Trigger: GAAGGTGGCCGAGCTGGCACACGCCAATCGGCGCGTGGAGCAGCACGAGACGGAGGTCAAGAAGCTGCGGCTGCGGGTGGAAGAGCTCAA 66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000077955.6 |
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| CDS CCA 90 bp | TCTTCTGTACTGGCTGTGTCCTCCCAGGGCAGGCGGTTGCGATCCTaGCGTCCTGAGCTGACCCGAGGGCCCCCTGCTGCTACACTGCAG | + |
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Preference number: 5 (lower is better) Translates to: SSVLAVSSQGRRLRS*RPELTRGPPAATLQ Trigger: CTGCAGTGTAGCAGCAGGGGGCCCTCGGGTCAGCTCAGGACGCCAGGATCGCAACCGCCTGCCCTGGGAGGACACAGCCAGTACAGAAGA 66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000077955.6 |
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| CDS GCA 90 bp | CTGCTACACTGCAGGCATCCCAGCAGCCCTCAGGCTCCTCTGGTCTaGTCTTCAGCAGGCTCTCTACCAGGTCCAGCTCCTGGCTGCCAG | + |
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Preference number: 5 (lower is better) Translates to: LLHCRHPSSPQAPLV*SSAGSLPGPAPGCQ Trigger: CTGGCAGCCAGGAGCTGGACCTGGTAGAGAGCCTGCTGAAGAGCAGACCAGAGGAGCCTGAGGGCTGCTGGGATGCCTGCAGTGTAGCAG 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000077955.6 |
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| CDS GCA 90 bp | CATCTCACCCCTCAGCTCAGCCATCTTGCGATCCATGCTAGAGCGTaGGCCCAGCTCATCCTCCAGGTCTTCCGACATGCGGCCCAACTC | + |
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Preference number: 5 (lower is better) Translates to: HLTPQLSHLAIHARA*AQLILQVFRHAAQL Trigger: GAGTTGGGCCGCATGTCGGAAGACCTGGAGGATGAGCTGGGCGCACGCTCTAGCATGGATCGCAAGATGGCTGAGCTGAGGGGTGAGATG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000077955.6 |
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| CDS GCA 90 bp | TGCAGGTGTTCCAGCTGCACCTGTAGGTTCTCGCTCTGTTCTGTCTaGTCGTCCAGGGACCGTTGCAGCTTCCGTGCCTGGTTGTGGGCC | + |
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Preference number: 5 (lower is better) Translates to: CRCSSCTCRFSLCSV*SSRDRCSFRAWLWA Trigger: GGCCCACAACCAGGCACGGAAGCTGCAACGGTCCCTGGACGAGCAGACAGAACAGAGCGAGAACCTACAGGTGCAGCTGGAACACCTGCA 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000077955.6 |
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| CDS GCA 90 bp | ACCTGTAGGTTCTCGCTCTGTTCTGTCTGCTCGTCCAGGGACCGTTaGAGCTTCCGTGCCTGGTTGTGGGCCTCGTCCAGCTCATCCTCT | + |
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Preference number: 5 (lower is better) Translates to: TCRFSLCSVCSSRDR*SFRAWLWASSSSSS Trigger: AGAGGATGAGCTGGACGAGGCCCACAACCAGGCACGGAAGCTGCAACGGTCCCTGGACGAGCAGACAGAACAGAGCGAGAACCTACAGGT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000077955.6 |
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| CDS-3UTR CAA 90 bp | GCCCCTTCCAGACCACCAAGCCTCCCTCACCATGTTCCATCTCTGCACGAAGTCGTGAGCAGGCTGCTCTaGGACAGCTGCGGAGACTCA | + |
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Preference number: 5 (lower is better) Translates to: APSRPPSLPHHVPSLHEVVSRLL*DSCGDS Trigger: TGAGTCTCCGCAGCTGTCCAAGAGCAGCCTGCTCAC...GACTTCGTGCAGAGATGGAACATGGTGAGGGAGGCTTGGTGGTCTGGAAGGGGC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000077955.6 |
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| CDS TCA 90 bp | TGCTCCACGCGCCGATTGGCGTGTGCCAGCTCGGCCACCTTCTCTTaGAACTGCTTCTTGAGTTTGCCGTGCACGTGCTTCAGATCTGCC | + |
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Preference number: 5 (lower is better) Translates to: CSTRRLACASSATFS*NCFLSLPCTCFRSA Trigger: GGCAGATCTGAAGCACGTGCACGGCAAACTCAAGAAGCAGTTTCAAGAGAAGGTGGCCGAGCTGGCACACGCCAATCGGCGCGTGGAGCA 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000077955.6 |
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| CDS GCA 90 bp | CTTCTTGACCTCCGTCTCGTGCTGCTCCACGCGCCGATTGGCGTGTaGCAGCTCGGCCACCTTCTCTTGAAACTGCTTCTTGAGTTTGCC | + |
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Preference number: 5 (lower is better) Translates to: LLDLRLVLLHAPIGV*QLGHLLLKLLLEFA Trigger: GGCAAACTCAAGAAGCAGTTTCAAGAGAAGGTGGCCGAGCTGGCACACGCCAATCGGCGCGTGGAGCAGCACGAGACGGAGGTCAAGAAG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000077955.6 |
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| CDS CCA 90 bp | GCACTTTCTGGGACTCATCTAGCCGTAGGCGCAGAGCAGTCAACTTaGAGGCATCCTCTTCTGTACTGGCTGTGTCCTCCCAGGGCAGGC | + |
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Preference number: 5 (lower is better) Translates to: ALSGTHLAVGAEQST*RHPLLYWLCPPRAG Trigger: GCCTGCCCTGGGAGGACACAGCCAGTACAGAAGAGGATGCCTCCAAGTTGACTGCTCTGCGCCTACGGCTAGATGAGTCCCAGAAAGTGC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000077955.6 |
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| CDS CCA 90 bp | TCAGATCTGCCAGTTCCTTGTTCTTCTCGAAAAGAGCAGCCTGGCTaGCCCTCAGGTCACAGTCCAGGGCACTGGCATTCTGCCGCCGTC | + |
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Preference number: 5 (lower is better) Translates to: SDLPVPCSSRKEQPG*PSGHSPGHWHSAAV Trigger: GACGGCGGCAGAATGCCAGTGCCCTGGACTGTGACCTGAGGGCCAGCCAGGCTGCTCTTTTCGAGAAGAACAAGGAACTGGCAGATCTGA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000077955.6 |
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| CDS-3UTR CAA 90 bp | CTGGGCATATATACAATATACATATCCAACAGGCTCCCCCTTCACAGGGGTGTGTCTTCCCGCGCACGGTaGCGCTCGGCGCGCACCTTG | + |
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Preference number: 5 (lower is better) Translates to: LGIYTIYISNRLPLHRGVSSRAR*RSARTL Trigger: CAAGGTGCGCGCCGAGCGCAACCGTGCGCGGGAAGA...CACACCCCTGTGAAGGGGGAGCCTGTTGGATATGTATATTGTATATATGCCCAG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000077955.6 |
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| CDS-3UTR CAA 90 bp | CAACCCTGGGCATATATACAATATACATATCCAACAGGCTCCCCCTTCACAGGGTGCTCCACGCGCCGATaGGCGTGTGCCAGCTCGGCC | + |
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Preference number: 5 (lower is better) Translates to: QPWAYIQYTYPTGSPFTGCSTRR*ACASSA Trigger: GGCCGAGCTGGCACACGCCAATCGGCGCGTGGAGCA...CCCTGTGAAGGGGGAGCCTGTTGGATATGTATATTGTATATATGCCCAGGGTTG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000077955.6 |
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| CDS CCA 90 bp | CCCAGCTCATCCTCCAGGTCTTCCGACATGCGGCCCAACTCATCCTaGTGCGTCTCCTTTAGGATGCTGAGTTGTTTGAGCATCTCCTGC | + |
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Preference number: 5 (lower is better) Translates to: PSSSSRSSDMRPNSS*CVSFRMLSCLSISC Trigger: GCAGGAGATGCTCAAACAACTCAGCATCCTAAAGGAGACGCACCAGGATGAGTTGGGCCGCATGTCGGAAGACCTGGAGGATGAGCTGGG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000077955.6 |
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| CDS-3UTR CAA 90 bp | GGTCTTAAGATCTGGGTGCTGGGCTGTCAGTTGGGTCCAAGCAACCCTGGGCATCCGACCACCAGCGCATaGTTTTCTCCATCTGCAAGG | + |
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Preference number: 5 (lower is better) Translates to: GLKIWVLGCQLGPSNPGHPTTSA*FSPSAR Trigger: CCTTGCAGATGGAGAAAACAATGCGCTGGTGGTCGG...ATGCCCAGGGTTGCTTGGACCCAACTGACAGCCCAGCACCCAGATCTTAAGACC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000077955.6 |
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| CDS-3UTR CAA 90 bp | GCCCCTTCCAGACCACCAAGCCTCCCTCACCATGTTCCATCTCTGCACGAAGTCTTATCCTCTCGCTCCTaGAGGAGCACTTTCTGGGAC | + |
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Preference number: 5 (lower is better) Translates to: APSRPPSLPHHVPSLHEVLSSRS*RSTFWD Trigger: GTCCCAGAAAGTGCTCCTCAAGGAGCGAGAGGATAA...GACTTCGTGCAGAGATGGAACATGGTGAGGGAGGCTTGGTGGTCTGGAAGGGGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000077955.6 |
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| CDS CCA 90 bp | TTGCTCAGAGCCAGCTTATCCTCTCGCTCCTTGAGGAGCACTTTCTaGGACTCATCTAGCCGTAGGCGCAGAGCAGTCAACTTGGAGGCA | + |
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Preference number: 5 (lower is better) Translates to: LLRASLSSRSLRSTF*DSSSRRRRAVNLEA Trigger: TGCCTCCAAGTTGACTGCTCTGCGCCTACGGCTAGATGAGTCCCAGAAAGTGCTCCTCAAGGAGCGAGAGGATAAGCTGGCTCTGAGCAA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000077955.6 |
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| CDS-3UTR CAA 90 bp | GATGCTCCGCTGGGCATCTGTGCTTTGGGGTCGGTCCTCTTCCACCCTGGATGTCTCGGCCACCTTCTCTaGAAACTGCTTCTTGAGTTT | + |
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Preference number: 5 (lower is better) Translates to: DAPLGICALGSVLFHPGCLGHLL*KLLLEF Trigger: AAACTCAAGAAGCAGTTTCAAGAGAAGGTGGCCGAG...ACATCCAGGGTGGAAGAGGACCGACCCCAAAGCACAGATGCCCAGCGGAGCATC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000077955.6 |
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| CDS TCA 90 bp | GCTTCTCGATGTTTTTGCTCAGAGCCAGCTTATCCTCTCGCTCCTTaGGGAGCACTTTCTGGGACTCATCTAGCCGTAGGCGCAGAGCAG | + |
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Preference number: 5 (lower is better) Translates to: ASRCFCSEPAYPLAP*GALSGTHLAVGAEQ Trigger: CTGCTCTGCGCCTACGGCTAGATGAGTCCCAGAAAGTGCTCCTCAAGGAGCGAGAGGATAAGCTGGCTCTGAGCAAAAACATCGAGAAGC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000077955.6 |
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| CDS GCA 90 bp | AGCTCATCCTCCAGGTCTTCCGACATGCGGCCCAACTCATCCTGGTaGGTCTCCTTTAGGATGCTGAGTTGTTTGAGCATCTCCTGCTTG | + |
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Preference number: 5 (lower is better) Translates to: SSSSRSSDMRPNSSW*VSFRMLSCLSISCL Trigger: CAAGCAGGAGATGCTCAAACAACTCAGCATCCTAAAGGAGACGCACCAGGATGAGTTGGGCCGCATGTCGGAAGACCTGGAGGATGAGCT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000077955.6 |
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| CDS-3UTR CAA 90 bp | GGGCTGTCAGTTGGGTCCAAGCAACCCTGGGCATATATACAATATACATATCCACGCAGCCGCAGCTTCTaGACCTCCGTCTCGTGCTGC | + |
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Preference number: 5 (lower is better) Translates to: GLSVGSKQPWAYIQYTYPRSRSF*TSVSCC Trigger: GCAGCACGAGACGGAGGTCAAGAAGCTGCGGCTGCG...TGGATATGTATATTGTATATATGCCCAGGGTTGCTTGGACCCAACTGACAGCCC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000077955.6 |
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| CDS-3UTR CAA 90 bp | CTGGGCATATATACAATATACATATCCAACAGGCTCCCCCTTCACAGGGGTGTGAGCTTCCGTGCCTGGTaGTGGGCCTCGTCCAGCTCA | + |
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Preference number: 5 (lower is better) Translates to: LGIYTIYISNRLPLHRGVSFRAW*WASSSS Trigger: TGAGCTGGACGAGGCCCACAACCAGGCACGGAAGCT...CACACCCCTGTGAAGGGGGAGCCTGTTGGATATGTATATTGTATATATGCCCAG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000077955.6 |
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| CDS-3UTR CAA 90 bp | CTGGGCATATATACAATATACATATCCAACAGGCTCCCCCTTCACAGGGGTGTGCTCGTCCAGGGACCGTaGCAGCTTCCGTGCCTGGTT | + |
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Preference number: 5 (lower is better) Translates to: LGIYTIYISNRLPLHRGVLVQGP*QLPCLV Trigger: AACCAGGCACGGAAGCTGCAACGGTCCCTGGACGAG...CACACCCCTGTGAAGGGGGAGCCTGTTGGATATGTATATTGTATATATGCCCAG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000077955.6 |
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| CDS TCA 90 bp | GATTGGCGTGTGCCAGCTCGGCCACCTTCTCTTGAAACTGCTTCTTaGGTTTGCCGTGCACGTGCTTCAGATCTGCCAGTTCCTTGTTCT | + |
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Preference number: 5 (lower is better) Translates to: DWRVPARPPSLETAS*VCRARASDLPVPCS Trigger: AGAACAAGGAACTGGCAGATCTGAAGCACGTGCACGGCAAACTCAAGAAGCAGTTTCAAGAGAAGGTGGCCGAGCTGGCACACGCCAATC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000077955.6 |
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| CDS-3UTR CAA 90 bp | CTGGGCATATATACAATATACATATCCAACAGGCTCCCCCTTCACAGGGGTGTGTGGGCCAGCTCTTTCTaGAGCTCTTCCACCCGCAGC | + |
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Preference number: 5 (lower is better) Translates to: LGIYTIYISNRLPLHRGVWASSF*SSSTRS Trigger: GCTGCGGGTGGAAGAGCTCAAGAAAGAGCTGGCCCA...CACACCCCTGTGAAGGGGGAGCCTGTTGGATATGTATATTGTATATATGCCCAG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000077955.6 |
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| CDS-3UTR CAA 90 bp | AAGATCTGGGTGCTGGGCTGTCAGTTGGGTCCAAGCAACCCTGGGCATATATACGTATTTGATCTTCCATaGGCTAAGCTCCCCCTCCAG | + |
|
Preference number: 5 (lower is better) Translates to: KIWVLGCQLGPSNPGHIYVFDLP*AKLPLQ Trigger: CTGGAGGGGGAGCTTAGCCAATGGAAGATCAAATAC...GTATATATGCCCAGGGTTGCTTGGACCCAACTGACAGCCCAGCACCCAGATCTT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000077955.6 |
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| CDS CCA 90 bp | ATCTCCTGCTTGGTCTTGCTCAACTCCTCGTATTTGATCTTCCATTaGCTAAGCTCCCCCTCCAGCTTCTCGATGTTTTTGCTCAGAGCC | + |
|
Preference number: 5 (lower is better) Translates to: ISCLVLLNSSYLIFH*LSSPSSFSMFLLRA Trigger: GGCTCTGAGCAAAAACATCGAGAAGCTGGAGGGGGAGCTTAGCCAATGGAAGATCAAATACGAGGAGTTGAGCAAGACCAAGCAGGAGAT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000077955.6 |
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| CDS-3UTR CAA 90 bp | GGGCTGTCAGTTGGGTCCAAGCAACCCTGGGCATATATACAATATACATATCCATTGAGCATCTCCTGCTaGGTCTTGCTCAACTCCTCG | + |
|
Preference number: 5 (lower is better) Translates to: GLSVGSKQPWAYIQYTYPLSISC*VLLNSS Trigger: CGAGGAGTTGAGCAAGACCAAGCAGGAGATGCTCAA...TGGATATGTATATTGTATATATGCCCAGGGTTGCTTGGACCCAACTGACAGCCC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000077955.6 |
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| CDS-3UTR CAA 90 bp | CTGGGCTGTCAGTTGGGTCCAAGCAACCCTGGGCATATATACAATATACATATCATCTCCTGCTTGGTCTaGCTCAACTCCTCGTATTTG | + |
|
Preference number: 5 (lower is better) Translates to: LGCQLGPSNPGHIYNIHIISCLV*LNSSYL Trigger: CAAATACGAGGAGTTGAGCAAGACCAAGCAGGAGAT...GATATGTATATTGTATATATGCCCAGGGTTGCTTGGACCCAACTGACAGCCCAG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000077955.6 |
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| CDS-3UTR CAA 90 bp | AAAAGTCTGAGTTCATGTTCATGGTATCTTACTATGAATAGCCCCTTCCAGACCAACTGCTTCTTGAGTTaGCCGTGCACGTGCTTCAGA | + |
|
Preference number: 5 (lower is better) Translates to: KSLSSCSWYLTMNSPFQTNCFLS*PCTCFR Trigger: TCTGAAGCACGTGCACGGCAAACTCAAGAAGCAGTT...GGTCTGGAAGGGGCTATTCATAGTAAGATACCATGAACATGAACTCAGACTTTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000077955.6 |
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| CDS-3UTR CAA 90 bp | AAAAGTCTGAGTTCATGTTCATGGTATCTTACTATGAATAGCCCCTTCCAGACCAGCTTCTCGATGTTTTaGCTCAGAGCCAGCTTATCC | + |
|
Preference number: 5 (lower is better) Translates to: KSLSSCSWYLTMNSPFQTSFSMF*LRASLS Trigger: GGATAAGCTGGCTCTGAGCAAAAACATCGAGAAGCT...GGTCTGGAAGGGGCTATTCATAGTAAGATACCATGAACATGAACTCAGACTTTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000077955.6 |
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| CDS CAA 72 bp | GCCTCCTGGCGCTCACGGCGCGCGCCCGCCAACTCCTaGGTGAGCGTATCCAGGCGCTGGCGCAGCTGGCGC | + |
|
Preference number: 6 (lower is better) Translates to: ASWRSRRAPANS*VSVSRRWRSWR Trigger: GCGCCAGCTGCGCCAGCGCCTGGATACGCTCACCAAGGAGTTGGCGGGCGCGCGCCGTGAGCGCCAGGAGGC 75% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000077955.6 |
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| CDS TCA 72 bp | CCTGGCGCTCACGGCGCGCGCCCGCCAACTCCTTGGTaGGCGTATCCAGGCGCTGGCGCAGCTGGCGCACCT | + |
|
Preference number: 6 (lower is better) Translates to: PGAHGARPPTPW*AYPGAGAAGAP Trigger: AGGTGCGCCAGCTGCGCCAGCGCCTGGATACGCTCACCAAGGAGTTGGCGGGCGCGCGCCGTGAGCGCCAGG 74% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000077955.6 |
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| CDS CAA 90 bp | ATGCGCTCCGGGGACGGGCTGCCCAGGATGGTGAGCAGGCTGCTCTaGGACAGCTGCGGAGACTCAGCCAGCCGCGGGCTCGGACCGTGG | + |
|
Preference number: 6 (lower is better) Translates to: MRSGDGLPRMVSRLL*DSCGDSASRGLGPW Trigger: CCACGGTCCGAGCCCGCGGCTGGCTGAGTCTCCGCAGCTGTCCAAGAGCAGCCTGCTCACCATCCTGGGCAGCCCGTCCCCGGAGCGCAT 71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000077955.6 ENSMUST00000162020.2 |
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| CDS CAA 90 bp | GTATCCAGGCGCTGGCGCAGCTGGCGCACCTCTTCCCGCGCACGGTaGCGCTCGGCGCGCACCTTGCTCCACTTCTCGCGCCAGTTCGCC | + |
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Preference number: 6 (lower is better) Translates to: VSRRWRSWRTSSRAR*RSARTLLHFSRQFA Trigger: GGCGAACTGGCGCGAGAAGTGGAGCAAGGTGCGCGCCGAGCGCAACCGTGCGCGGGAAGAGGTGCGCCAGCTGCGCCAGCGCCTGGATAC 71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000077955.6 |
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| CDS GCA 72 bp | CCTCTTCCCGCGCACGGTTGCGCTCGGCGCGCACCTTaGTCCACTTCTCGCGCCAGTTCGCCGTGCAGTCCG | + |
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Preference number: 6 (lower is better) Translates to: PLPAHGCARRAP*STSRASSPCSP Trigger: CGGACTGCACGGCGAACTGGCGCGAGAAGTGGAGCAAGGTGCGCGCCGAGCGCAACCGTGCGCGGGAAGAGG 71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000077955.6 |
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| CDS CCA 72 bp | GCGCCCGCCAACTCCTTGGTGAGCGTATCCAGGCGCTaGCGCAGCTGGCGCACCTCTTCCCGCGCACGGTTG | + |
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Preference number: 6 (lower is better) Translates to: APANSLVSVSRR*RSWRTSSRARL Trigger: CAACCGTGCGCGGGAAGAGGTGCGCCAGCTGCGCCAGCGCCTGGATACGCTCACCAAGGAGTTGGCGGGCGC 71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000077955.6 |
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| CDS CCA 72 bp | CTGGCTGTGTCCTCCCAGGGCAGGCGGTTGCGATCCTaGCGTCCTGAGCTGACCCGAGGGCCCCCTGCTGCT | + |
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Preference number: 6 (lower is better) Translates to: LAVSSQGRRLRS*RPELTRGPPAA Trigger: AGCAGCAGGGGGCCCTCGGGTCAGCTCAGGACGCCAGGATCGCAACCGCCTGCCCTGGGAGGACACAGCCAG 71% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000077955.6 |
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| CDS TCA 72 bp | GGCCCATGCGCTCCGGGGACGGGCTGCCCAGGATGGTaGGCAGGCTGCTCTTGGACAGCTGCGGAGACTCAG | + |
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Preference number: 6 (lower is better) Translates to: GPCAPGTGCPGW*AGCSWTAAETQ Trigger: CTGAGTCTCCGCAGCTGTCCAAGAGCAGCCTGCTCACCATCCTGGGCAGCCCGTCCCCGGAGCGCATGGGCC 69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000077955.6 ENSMUST00000162020.2 |
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| CDS TCA 72 bp | GTCCTCCCAGGGCAGGCGGTTGCGATCCTGGCGTCCTaGGCTGACCCGAGGGCCCCCTGCTGCTACACTGCA | + |
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Preference number: 6 (lower is better) Translates to: VLPGQAVAILAS*ADPRAPCCYTA Trigger: TGCAGTGTAGCAGCAGGGGGCCCTCGGGTCAGCTCAGGACGCCAGGATCGCAACCGCCTGCCCTGGGAGGAC 69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000077955.6 |
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| CDS GCA 72 bp | ACCCGCAGCCGCAGCTTCTTGACCTCCGTCTCGTGCTaGTCCACGCGCCGATTGGCGTGTGCCAGCTCGGCC | + |
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Preference number: 6 (lower is better) Translates to: TRSRSFLTSVSC*STRRLACASSA Trigger: GGCCGAGCTGGCACACGCCAATCGGCGCGTGGAGCAGCACGAGACGGAGGTCAAGAAGCTGCGGCTGCGGGT 69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000077955.6 |
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| CDS CCA 72 bp | AACTCCTTGGTGAGCGTATCCAGGCGCTGGCGCAGCTaGCGCACCTCTTCCCGCGCACGGTTGCGCTCGGCG | + |
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Preference number: 6 (lower is better) Translates to: NSLVSVSRRWRS*RTSSRARLRSA Trigger: CGCCGAGCGCAACCGTGCGCGGGAAGAGGTGCGCCAGCTGCGCCAGCGCCTGGATACGCTCACCAAGGAGTT 69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000077955.6 |
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| CDS GCA 72 bp | TCTTCAGCAGGCTCTCTACCAGGTCCAGCTCCTGGCTaGCAGGCGGCCTTTCCGCCCCGATGTCGCGCACCG | + |
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Preference number: 6 (lower is better) Translates to: SSAGSLPGPAPG*QAAFPPRCRAP Trigger: CGGTGCGCGACATCGGGGCGGAAAGGCCGCCTGGCAGCCAGGAGCTGGACCTGGTAGAGAGCCTGCTGAAGA 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000077955.6 |
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| CDS GCA 72 bp | CTGGCCCTCAGGTCACAGTCCAGGGCACTGGCATTCTaGCGCCGTCTGCGGGCCAGAGCCTCCTCCAGGTCT | + |
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Preference number: 6 (lower is better) Translates to: LALRSQSRALAF*RRLRARASSRS Trigger: AGACCTGGAGGAGGCTCTGGCCCGCAGACGGCGGCAGAATGCCAGTGCCCTGGACTGTGACCTGAGGGCCAG 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000077955.6 |
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| CDS GCA 72 bp | TCCACCCGCAGCCGCAGCTTCTTGACCTCCGTCTCGTaGTGCTCCACGCGCCGATTGGCGTGTGCCAGCTCG | + |
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Preference number: 6 (lower is better) Translates to: STRSRSFLTSVS*CSTRRLACASS Trigger: CGAGCTGGCACACGCCAATCGGCGCGTGGAGCAGCACGAGACGGAGGTCAAGAAGCTGCGGCTGCGGGTGGA 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000077955.6 |
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| CDS GCA 72 bp | GGTCACAGTCCAGGGCACTGGCATTCTGCCGCCGTCTaGGGGCCAGAGCCTCCTCCAGGTCTCCAACCTGTG | + |
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Preference number: 6 (lower is better) Translates to: GHSPGHWHSAAV*GPEPPPGLQPV Trigger: CACAGGTTGGAGACCTGGAGGAGGCTCTGGCCCGCAGACGGCGGCAGAATGCCAGTGCCCTGGACTGTGACC 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000077955.6 |
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| CDS CAA 72 bp | TGCTCGTCCAGGGACCGTTGCAGCTTCCGTGCCTGGTaGTGGGCCTCGTCCAGCTCATCCTCTGCCTGGGCC | + |
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Preference number: 6 (lower is better) Translates to: CSSRDRCSFRAW*WASSSSSSAWA Trigger: GGCCCAGGCAGAGGATGAGCTGGACGAGGCCCACAACCAGGCACGGAAGCTGCAACGGTCCCTGGACGAGCA 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000077955.6 |
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| CDS CAA 90 bp | TGGGCCAGCTCTTTCTTGAGCTCTTCCACCCGCAGCCGCAGCTTCTaGACCTCCGTCTCGTGCTGCTCCACGCGCCGATTGGCGTGTGCC | + |
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Preference number: 6 (lower is better) Translates to: WASSFLSSSTRSRSF*TSVSCCSTRRLACA Trigger: GGCACACGCCAATCGGCGCGTGGAGCAGCACGAGACGGAGGTCAAGAAGCTGCGGCTGCGGGTGGAAGAGCTCAAGAAAGAGCTGGCCCA 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000077955.6 |
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| CDS GCA 72 bp | TTCTCGCTCTGTTCTGTCTGCTCGTCCAGGGACCGTTaGAGCTTCCGTGCCTGGTTGTGGGCCTCGTCCAGC | + |
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Preference number: 6 (lower is better) Translates to: FSLCSVCSSRDR*SFRAWLWASSS Trigger: GCTGGACGAGGCCCACAACCAGGCACGGAAGCTGCAACGGTCCCTGGACGAGCAGACAGAACAGAGCGAGAA 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000077955.6 |
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| CDS CCA 72 bp | CCTGGATTTGCAGGTCCTCATCCTCATCCAGGTCGCTaGCTCCGTCTCCGGCTTCCTCGGTGCCAAATCGGG | + |
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Preference number: 6 (lower is better) Translates to: PGFAGPHPHPGR*LRLRLPRCQIG Trigger: CCCGATTTGGCACCGAGGAAGCCGGAGACGGAGCCAGCGACCTGGATGAGGATGAGGACCTGCAAATCCAGG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000077955.6 |
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| CDS CAA 72 bp | GTTCTCGCTCTGTTCTGTCTGCTCGTCCAGGGACCGTaGCAGCTTCCGTGCCTGGTTGTGGGCCTCGTCCAG | + |
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Preference number: 6 (lower is better) Translates to: VLALFCLLVQGP*QLPCLVVGLVQ Trigger: CTGGACGAGGCCCACAACCAGGCACGGAAGCTGCAACGGTCCCTGGACGAGCAGACAGAACAGAGCGAGAAC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000077955.6 |
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| CDS GCA 72 bp | CTCCGTCTCGTGCTGCTCCACGCGCCGATTGGCGTGTaGCAGCTCGGCCACCTTCTCTTGAAACTGCTTCTT | + |
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Preference number: 6 (lower is better) Translates to: LRLVLLHAPIGV*QLGHLLLKLLL Trigger: AAGAAGCAGTTTCAAGAGAAGGTGGCCGAGCTGGCACACGCCAATCGGCGCGTGGAGCAGCACGAGACGGAG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000077955.6 |
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| CDS GCA 72 bp | TCCAGCTGCACCTGTAGGTTCTCGCTCTGTTCTGTCTaGTCGTCCAGGGACCGTTGCAGCTTCCGTGCCTGG | + |
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Preference number: 6 (lower is better) Translates to: SSCTCRFSLCSV*SSRDRCSFRAW Trigger: CCAGGCACGGAAGCTGCAACGGTCCCTGGACGAGCAGACAGAACAGAGCGAGAACCTACAGGTGCAGCTGGA 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000077955.6 |
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| CDS GCA 72 bp | TGCTGCCTGCGGAGCCTGGACTGCAGGTGTTCCAGCTaGACCTGTAGGTTCTCGCTCTGTTCTGTCTGCTCG | + |
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Preference number: 6 (lower is better) Translates to: CCLRSLDCRCSS*TCRFSLCSVCS Trigger: CGAGCAGACAGAACAGAGCGAGAACCTACAGGTGCAGCTGGAACACCTGCAGTCCAGGCTCCGCAGGCAGCA 61% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000077955.6 |
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| CDS CAA 72 bp | TCTTTCTTGAGCTCTTCCACCCGCAGCCGCAGCTTCTaGACCTCCGTCTCGTGCTGCTCCACGCGCCGATTG | + |
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Preference number: 6 (lower is better) Translates to: SFLSSSTRSRSF*TSVSCCSTRRL Trigger: CAATCGGCGCGTGGAGCAGCACGAGACGGAGGTCAAGAAGCTGCGGCTGCGGGTGGAAGAGCTCAAGAAAGA 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000077955.6 |
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| CDS CCA 72 bp | GCAGAGCAGTCAACTTGGAGGCATCCTCTTCTGTACTaGCTGTGTCCTCCCAGGGCAGGCGGTTGCGATCCT | + |
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Preference number: 6 (lower is better) Translates to: AEQSTWRHPLLY*LCPPRAGGCDP Trigger: AGGATCGCAACCGCCTGCCCTGGGAGGACACAGCCAGTACAGAAGAGGATGCCTCCAAGTTGACTGCTCTGC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000077955.6 |
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| CDS CAA 90 bp | CTGCTCCACGCGCCGATTGGCGTGTGCCAGCTCGGCCACCTTCTCTaGAAACTGCTTCTTGAGTTTGCCGTGCACGTGCTTCAGATCTGC | + |
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Preference number: 6 (lower is better) Translates to: LLHAPIGVCQLGHLL*KLLLEFAVHVLQIC Trigger: GCAGATCTGAAGCACGTGCACGGCAAACTCAAGAAGCAGTTTCAAGAGAAGGTGGCCGAGCTGGCACACGCCAATCGGCGCGTGGAGCAG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000077955.6 |
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| CDS CAA 90 bp | AGCACTTTCTGGGACTCATCTAGCCGTAGGCGCAGAGCAGTCAACTaGGAGGCATCCTCTTCTGTACTGGCTGTGTCCTCCCAGGGCAGG | + |
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Preference number: 6 (lower is better) Translates to: STFWDSSSRRRRAVN*EASSSVLAVSSQGR Trigger: CCTGCCCTGGGAGGACACAGCCAGTACAGAAGAGGATGCCTCCAAGTTGACTGCTCTGCGCCTACGGCTAGATGAGTCCCAGAAAGTGCT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000077955.6 |
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| CDS TCA 72 bp | CGCCGATTGGCGTGTGCCAGCTCGGCCACCTTCTCTTaGAACTGCTTCTTGAGTTTGCCGTGCACGTGCTTC | + |
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Preference number: 6 (lower is better) Translates to: RRLACASSATFS*NCFLSLPCTCF Trigger: GAAGCACGTGCACGGCAAACTCAAGAAGCAGTTTCAAGAGAAGGTGGCCGAGCTGGCACACGCCAATCGGCG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000077955.6 |
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| CDS CCA 72 bp | GGGACTCATCTAGCCGTAGGCGCAGAGCAGTCAACTTaGAGGCATCCTCTTCTGTACTGGCTGTGTCCTCCC | + |
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Preference number: 6 (lower is better) Translates to: GTHLAVGAEQST*RHPLLYWLCPP Trigger: GGGAGGACACAGCCAGTACAGAAGAGGATGCCTCCAAGTTGACTGCTCTGCGCCTACGGCTAGATGAGTCCC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000077955.6 |
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| CDS CAA 72 bp | GCGCCGATTGGCGTGTGCCAGCTCGGCCACCTTCTCTaGAAACTGCTTCTTGAGTTTGCCGTGCACGTGCTT | + |
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Preference number: 6 (lower is better) Translates to: APIGVCQLGHLL*KLLLEFAVHVL Trigger: AAGCACGTGCACGGCAAACTCAAGAAGCAGTTTCAAGAGAAGGTGGCCGAGCTGGCACACGCCAATCGGCGC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000077955.6 |
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| CDS CCA 72 bp | GCCAGCTTATCCTCTCGCTCCTTGAGGAGCACTTTCTaGGACTCATCTAGCCGTAGGCGCAGAGCAGTCAAC | + |
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Preference number: 6 (lower is better) Translates to: ASLSSRSLRSTF*DSSSRRRRAVN Trigger: GTTGACTGCTCTGCGCCTACGGCTAGATGAGTCCCAGAAAGTGCTCCTCAAGGAGCGAGAGGATAAGCTGGC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000077955.6 |
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| CDS CAA 72 bp | TGGGACTCATCTAGCCGTAGGCGCAGAGCAGTCAACTaGGAGGCATCCTCTTCTGTACTGGCTGTGTCCTCC | + |
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Preference number: 6 (lower is better) Translates to: WDSSSRRRRAVN*EASSSVLAVSS Trigger: GGAGGACACAGCCAGTACAGAAGAGGATGCCTCCAAGTTGACTGCTCTGCGCCTACGGCTAGATGAGTCCCA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000077955.6 |
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| CDS CAA 72 bp | TCGGGTACTACGAATCTTCCCAAAAAGGGGTGCGTTTaGCTGCTGCCTGCGGAGCCTGGACTGCAGGTGTTC | + |
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Preference number: 6 (lower is better) Translates to: SGTTNLPKKGCV*LLPAEPGLQVF Trigger: GAACACCTGCAGTCCAGGCTCCGCAGGCAGCAGCAAAACGCACCCCTTTTTGGGAAGATTCGTAGTACCCGA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000077955.6 |
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| CDS CCA 72 bp | TCCTCCAGGTCTTCCGACATGCGGCCCAACTCATCCTaGTGCGTCTCCTTTAGGATGCTGAGTTGTTTGAGC | + |
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Preference number: 6 (lower is better) Translates to: SSRSSDMRPNSS*CVSFRMLSCLS Trigger: GCTCAAACAACTCAGCATCCTAAAGGAGACGCACCAGGATGAGTTGGGCCGCATGTCGGAAGACCTGGAGGA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000077955.6 |
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| CDS TCA 72 bp | GTGCCAGCTCGGCCACCTTCTCTTGAAACTGCTTCTTaGGTTTGCCGTGCACGTGCTTCAGATCTGCCAGTT | + |
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Preference number: 6 (lower is better) Translates to: VPARPPSLETAS*VCRARASDLPV Trigger: AACTGGCAGATCTGAAGCACGTGCACGGCAAACTCAAGAAGCAGTTTCAAGAGAAGGTGGCCGAGCTGGCAC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000077955.6 |
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| CDS GCA 72 bp | TCCAGGTCTTCCGACATGCGGCCCAACTCATCCTGGTaGGTCTCCTTTAGGATGCTGAGTTGTTTGAGCATC | + |
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Preference number: 6 (lower is better) Translates to: SRSSDMRPNSSW*VSFRMLSCLSI Trigger: GATGCTCAAACAACTCAGCATCCTAAAGGAGACGCACCAGGATGAGTTGGGCCGCATGTCGGAAGACCTGGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000077955.6 |
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| CDS CAA 72 bp | CATTGGCTAAGCTCCCCCTCCAGCTTCTCGATGTTTTaGCTCAGAGCCAGCTTATCCTCTCGCTCCTTGAGG | + |
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Preference number: 6 (lower is better) Translates to: HWLSSPSSFSMF*LRASLSSRSLR Trigger: CCTCAAGGAGCGAGAGGATAAGCTGGCTCTGAGCAAAAACATCGAGAAGCTGGAGGGGGAGCTTAGCCAATG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000077955.6 |
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| CDS CAA 90 bp | AGCTTCTCGATGTTTTTGCTCAGAGCCAGCTTATCCTCTCGCTCCTaGAGGAGCACTTTCTGGGACTCATCTAGCCGTAGGCGCAGAGCA | + |
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Preference number: 6 (lower is better) Translates to: SFSMFLLRASLSSRS*RSTFWDSSSRRRRA Trigger: TGCTCTGCGCCTACGGCTAGATGAGTCCCAGAAAGTGCTCCTCAAGGAGCGAGAGGATAAGCTGGCTCTGAGCAAAAACATCGAGAAGCT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000077955.6 |
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| CDS CAA 90 bp | TTGATCTTCCATTGGCTAAGCTCCCCCTCCAGCTTCTCGATGTTTTaGCTCAGAGCCAGCTTATCCTCTCGCTCCTTGAGGAGCACTTTC | + |
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Preference number: 6 (lower is better) Translates to: LIFHWLSSPSSFSMF*LRASLSSRSLRSTF Trigger: GAAAGTGCTCCTCAAGGAGCGAGAGGATAAGCTGGCTCTGAGCAAAAACATCGAGAAGCTGGAGGGGGAGCTTAGCCAATGGAAGATCAA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000077955.6 |
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| CDS GCA 72 bp | CTGCTTCTTGAGTTTGCCGTGCACGTGCTTCAGATCTaGCAGTTCCTTGTTCTTCTCGAAAAGAGCAGCCTG | + |
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Preference number: 6 (lower is better) Translates to: LLLEFAVHVLQI*QFLVLLEKSSL Trigger: CAGGCTGCTCTTTTCGAGAAGAACAAGGAACTGGCAGATCTGAAGCACGTGCACGGCAAACTCAAGAAGCAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000077955.6 |
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| CDS CAA 72 bp | ATGTTTTTGCTCAGAGCCAGCTTATCCTCTCGCTCCTaGAGGAGCACTTTCTGGGACTCATCTAGCCGTAGG | + |
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Preference number: 6 (lower is better) Translates to: MFLLRASLSSRS*RSTFWDSSSRR Trigger: CCTACGGCTAGATGAGTCCCAGAAAGTGCTCCTCAAGGAGCGAGAGGATAAGCTGGCTCTGAGCAAAAACAT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000077955.6 |
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| CDS CAA 72 bp | AGCATCTCCTGCTTGGTCTTGCTCAACTCCTCGTATTaGATCTTCCATTGGCTAAGCTCCCCCTCCAGCTTC | + |
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Preference number: 6 (lower is better) Translates to: SISCLVLLNSSY*IFHWLSSPSSF Trigger: GAAGCTGGAGGGGGAGCTTAGCCAATGGAAGATCAAATACGAGGAGTTGAGCAAGACCAAGCAGGAGATGCT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000077955.6 |
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| CDS CAA 90 bp | CATCTCCTGCTTGGTCTTGCTCAACTCCTCGTATTTGATCTTCCATaGGCTAAGCTCCCCCTCCAGCTTCTCGATGTTTTTGCTCAGAGC | + |
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Preference number: 6 (lower is better) Translates to: HLLLGLAQLLVFDLP*AKLPLQLLDVFAQS Trigger: GCTCTGAGCAAAAACATCGAGAAGCTGGAGGGGGAGCTTAGCCAATGGAAGATCAAATACGAGGAGTTGAGCAAGACCAAGCAGGAGATG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000077955.6 |
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| CDS CAA 90 bp | AGTTGTTTGAGCATCTCCTGCTTGGTCTTGCTCAACTCCTCGTATTaGATCTTCCATTGGCTAAGCTCCCCCTCCAGCTTCTCGATGTTT | + |
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Preference number: 6 (lower is better) Translates to: SCLSISCLVLLNSSY*IFHWLSSPSSFSMF Trigger: AAACATCGAGAAGCTGGAGGGGGAGCTTAGCCAATGGAAGATCAAATACGAGGAGTTGAGCAAGACCAAGCAGGAGATGCTCAAACAACT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000077955.6 |
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