RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for CC2D2B (Mus musculus)

Ensembl gene IDs: ENSMUSG00000108929

Ensembl transcript IDs: ENSMUST00000207801.2, ENSMUST00000207863.2, ENSMUST00000224596.2

Found 236 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp AGAGGTGTGTTGGTGAGGATGCCATCTAGACGTGTCATCAAAGGCTaGGGGAGGGGTGCTGAGGTGGTGGTCTCCATCGTACTCAGCTCT +
Preference number: 1 (lower is better)
Translates to: RGVLVRMPSRRVIKG*GRGAEVVVSIVLSS
Trigger: AGAGCTGAGTACGATGGAGACCACCACCTCAGCACCCCTCCCCCAGCCTTTGATGACACGTCTAGATGGCATCCTCACCAACACACCTCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000207801.2
ENSMUST00000224596.2
3UTR TCA 90 bp GACTCTCCAGATGGCTCGGATGGAGGCGTCCTGACCTCCACAAGTTaGGCATCACGAATCAGGCCAGAATTGCTTCTTTCCCAGAATGAG +
Preference number: 1 (lower is better)
Translates to: DSPDGSDGGVLTSTS*ASRIRPELLLSQNE
Trigger: CTCATTCTGGGAAAGAAGCAATTCTGGCCTGATTCGTGATGCTCAACTTGTGGAGGTCAGGACGCCTCCATCCGAGCCATCTGGAGAGTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000207801.2
ENSMUST00000224596.2
3UTR CCA 90 bp TGCCATCTAGACGTGTCATCAAAGGCTGGGGGAGGGGTGCTGAGGTaGTGGTCTCCATCGTACTCAGCTCTATGTAAGAATCCAGATTAT +
Preference number: 1 (lower is better)
Translates to: CHLDVSSKAGGGVLR*WSPSYSALCKNPDY
Trigger: ATAATCTGGATTCTTACATAGAGCTGAGTACGATGGAGACCACCACCTCAGCACCCCTCCCCCAGCCTTTGATGACACGTCTAGATGGCA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000207801.2
ENSMUST00000224596.2
3UTR-3UTR CCA 90 bp GAGCATCACGAATCAGGCCAGAATTGCTTCTTTCCCAGAATGAGATCTAACGTGCGTGTCATCAAAGGCTaGGGGAGGGGTGCTGAGGTG +
Preference number: 2 (lower is better)
Translates to: EHHESGQNCFFPRMRSNVRVIKG*GRGAEV
Trigger: CACCTCAGCACCCCTCCCCCAGCCTTTGATGACACG...CACGTTAGATCTCATTCTGGGAAAGAAGCAATTCTGGCCTGATTCGTGATGCTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000207801.2
ENSMUST00000224596.2
3UTR-3UTR GCA 90 bp GCAGCCAGACTACCTGAAGAGTCTCCCAGAAGAGGTGTGTTGGTGAGGATGCCAGACCATAGTACTCTCTaGCTTTTCCTGTGTTCTCTT +
Preference number: 2 (lower is better)
Translates to: AARLPEESPRRGVLVRMPDHSTL*LFLCSL
Trigger: AAGAGAACACAGGAAAAGGCAGAGAGTACTATGGTC...TGGCATCCTCACCAACACACCTCTTCTGGGAGACTCTTCAGGTAGTCTGGCTGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000207801.2
ENSMUST00000224596.2
3UTR-3UTR CAA 90 bp GAGCATCACGAATCAGGCCAGAATTGCTTCTTTCCCAGAATGAGATCTAACGTGCCCAGAAGAGGTGTGTaGGTGAGGATGCCATCTAGA +
Preference number: 3 (lower is better)
Translates to: EHHESGQNCFFPRMRSNVPRRGV*VRMPSR
Trigger: TCTAGATGGCATCCTCACCAACACACCTCTTCTGGG...CACGTTAGATCTCATTCTGGGAAAGAAGCAATTCTGGCCTGATTCGTGATGCTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000207801.2
ENSMUST00000224596.2
CDS-3UTR CCA 90 bp GCAGCCAGACTACCTGAAGAGTCTCCCAGAAGAGGTGTGTTGGTGAGGATGCCAAGAGCCGGAGCAGCCTaGCACACAGGACGTGTTCCT +
Preference number: 4 (lower is better)
Translates to: AARLPEESPRRGVLVRMPRAGAA*HTGRVP
Trigger: AGGAACACGTCCTGTGTGCCAGGCTGCTCCGGCTCT...TGGCATCCTCACCAACACACCTCTTCTGGGAGACTCTTCAGGTAGTCTGGCTGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000207801.2
ENSMUST00000224596.2
CDS-3UTR TCA 90 bp GAAGAGTCTCCCAGAAGAGGTGTGTTGGTGAGGATGCCATCTAGACGTGTCATCCGTTCCTTCAGGGTCTaGGGCTGGATGGGAGAGAGT +
Preference number: 4 (lower is better)
Translates to: EESPRRGVLVRMPSRRVIRSFRV*GWMGES
Trigger: ACTCTCTCCCATCCAGCCTCAGACCCTGAAGGAACG...GATGACACGTCTAGATGGCATCCTCACCAACACACCTCTTCTGGGAGACTCTTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000207801.2
ENSMUST00000224596.2
CDS-3UTR TCA 90 bp GCAGCCAGACTACCTGAAGAGTCTCCCAGAAGAGGTGTGTTGGTGAGGATGCCAGGGTCAAACTGCTTATaGCATTGCCCCGTCGATGGA +
Preference number: 4 (lower is better)
Translates to: AARLPEESPRRGVLVRMPGSNCL*HCPVDG
Trigger: TCCATCGACGGGGCAATGTCATAAGCAGTTTGACCC...TGGCATCCTCACCAACACACCTCTTCTGGGAGACTCTTCAGGTAGTCTGGCTGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000207801.2
ENSMUST00000224596.2
CDS-3UTR GCA 90 bp GAAGAGTCTCCCAGAAGAGGTGTGTTGGTGAGGATGCCATCTAGACGTGTCATCGAGACGCTCTGCCTCTaGCTGTCCTGCAAAGACTCG +
Preference number: 4 (lower is better)
Translates to: EESPRRGVLVRMPSRRVIETLCL*LSCKDS
Trigger: CGAGTCTTTGCAGGACAGGCAGAGGCAGAGCGTCTC...GATGACACGTCTAGATGGCATCCTCACCAACACACCTCTTCTGGGAGACTCTTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000207801.2
ENSMUST00000224596.2
CDS-3UTR CCA 90 bp AGCCAAACCTCAAGGTGTCAGGAAAGCTTGGGTCTAGGAGACCATAGTACTCTCGGGTCTGAGGCTGGATaGGAGAGAGTCTCCTCTGTG +
Preference number: 4 (lower is better)
Translates to: SQTSRCQESLGLGDHSTLGSEAG*ERVSSV
Trigger: CACAGAGGAGACTCTCTCCCATCCAGCCTCAGACCC...GAGAGTACTATGGTCTCCTAGACCCAAGCTTTCCTGACACCTTGAGGTTTGGCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000207801.2
ENSMUST00000224596.2
3UTR CAA 72 bp AGATGGCTCGGATGGAGGCGTCCTGACCTCCACAAGTaGAGCATCACGAATCAGGCCAGAATTGCTTCTTTC +
Preference number: 4 (lower is better)
Translates to: RWLGWRRPDLHK*SITNQARIASF
Trigger: GAAAGAAGCAATTCTGGCCTGATTCGTGATGCTCAACTTGTGGAGGTCAGGACGCCTCCATCCGAGCCATCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000207801.2
ENSMUST00000224596.2
CDS-3UTR TCA 90 bp GACCTCCACAAGTTGAGCATCACGAATCAGGCCAGAATTGCTTCTTTCCCAGAACGTTCCTTCAGGGTCTaGGGCTGGATGGGAGAGAGT +
Preference number: 4 (lower is better)
Translates to: DLHKLSITNQARIASFPERSFRV*GWMGES
Trigger: ACTCTCTCCCATCCAGCCTCAGACCCTGAAGGAACG...TTCTGGGAAAGAAGCAATTCTGGCCTGATTCGTGATGCTCAACTTGTGGAGGTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000207801.2
ENSMUST00000224596.2
CDS-3UTR TCA 90 bp GAAGAGTCTCCCAGAAGAGGTGTGTTGGTGAGGATGCCATCTAGACGTGTCATCGGGTCAAACTGCTTATaGCATTGCCCCGTCGATGGA +
Preference number: 4 (lower is better)
Translates to: EESPRRGVLVRMPSRRVIGSNCL*HCPVDG
Trigger: TCCATCGACGGGGCAATGTCATAAGCAGTTTGACCC...GATGACACGTCTAGATGGCATCCTCACCAACACACCTCTTCTGGGAGACTCTTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000207801.2
ENSMUST00000224596.2
CDS-3UTR TCA 90 bp CCTGACCTCCACAAGTTGAGCATCACGAATCAGGCCAGAATTGCTTCTTTCCCACTGAGAAAGGGAAGCTaGTGGAGCCCAGCCAGTTCT +
Preference number: 4 (lower is better)
Translates to: PDLHKLSITNQARIASFPLRKGS*WSPASS
Trigger: AGAACTGGCTGGGCTCCATCAGCTTCCCTTTCTCAG...TGGGAAAGAAGCAATTCTGGCCTGATTCGTGATGCTCAACTTGTGGAGGTCAGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000224596.2
CDS-3UTR CCA 90 bp GCAGCCAGACTACCTGAAGAGTCTCCCAGAAGAGGTGTGTTGGTGAGGATGCCACATAAAATCCTCATCTaGGCCCTCAGCAGTGTTTCG +
Preference number: 4 (lower is better)
Translates to: AARLPEESPRRGVLVRMPHKILI*ALSSVS
Trigger: CGAAACACTGCTGAGGGCCCAGATGAGGATTTTATG...TGGCATCCTCACCAACACACCTCTTCTGGGAGACTCTTCAGGTAGTCTGGCTGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000207801.2
ENSMUST00000224596.2
CDS-3UTR CCA 90 bp GAAGAGTCTCCCAGAAGAGGTGTGTTGGTGAGGATGCCATCTAGACGTGTCATCGCAGTTTCTGCTGGCTaGCCACTGGAGAACTACTTG +
Preference number: 4 (lower is better)
Translates to: EESPRRGVLVRMPSRRVIAVSAG*PLENYL
Trigger: CAAGTAGTTCTCCAGTGGCCAGCCAGCAGAAACTGC...GATGACACGTCTAGATGGCATCCTCACCAACACACCTCTTCTGGGAGACTCTTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000207801.2
ENSMUST00000224596.2
CDS-3UTR CCA 90 bp GCAGCCAGACTACCTGAAGAGTCTCCCAGAAGAGGTGTGTTGGTGAGGATGCCATATGTGGATCAATCCTaGCATCATCTGCCCACTCAC +
Preference number: 4 (lower is better)
Translates to: AARLPEESPRRGVLVRMPYVDQS*HHLPTH
Trigger: GTGAGTGGGCAGATGATGCCAGGATTGATCCACATA...TGGCATCCTCACCAACACACCTCTTCTGGGAGACTCTTCAGGTAGTCTGGCTGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000207801.2
ENSMUST00000224596.2
CDS-3UTR TCA 90 bp GCAGCCAGACTACCTGAAGAGTCTCCCAGAAGAGGTGTGTTGGTGAGGATGCCACCAGAAGCTCTCTTTTaGGTAGTCAAACTGTACAGC +
Preference number: 4 (lower is better)
Translates to: AARLPEESPRRGVLVRMPPEALF*VVKLYS
Trigger: GCTGTACAGTTTGACTACTCAAAAGAGAGCTTCTGG...TGGCATCCTCACCAACACACCTCTTCTGGGAGACTCTTCAGGTAGTCTGGCTGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000207801.2
ENSMUST00000224596.2
CDS-3UTR GCA 90 bp GACCTCCACAAGTTGAGCATCACGAATCAGGCCAGAATTGCTTCTTTCCCAGAACCTTTCGGCAGTTTCTaGTGGCTGGCCACTGGAGAA +
Preference number: 4 (lower is better)
Translates to: DLHKLSITNQARIASFPEPFGSF*WLATGE
Trigger: TTCTCCAGTGGCCAGCCAGCAGAAACTGCCGAAAGG...TTCTGGGAAAGAAGCAATTCTGGCCTGATTCGTGATGCTCAACTTGTGGAGGTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000207801.2
ENSMUST00000224596.2
CDS-3UTR CCA 90 bp TGCTTCTTTCCCAGAATGAGATCTAACGTGGACTGCAGTACACAAAGCAGCCAGCTGTGTAGCAGGGAGTaGTCCTTTTCCCTTTCGGCC +
Preference number: 4 (lower is better)
Translates to: CFFPRMRSNVDCSTQSSQLCSRE*SFSLSA
Trigger: GGCCGAAAGGGAAAAGGACCACTCCCTGCTACACAG...CTGGCTGCTTTGTGTACTGCAGTCCACGTTAGATCTCATTCTGGGAAAGAAGCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000207801.2
ENSMUST00000224596.2
CDS-3UTR CCA 90 bp GAGCATCACGAATCAGGCCAGAATTGCTTCTTTCCCAGAATGAGATCTAACGTGGGGTCTGAGGCTGGATaGGAGAGAGTCTCCTCTGTG +
Preference number: 4 (lower is better)
Translates to: EHHESGQNCFFPRMRSNVGSEAG*ERVSSV
Trigger: CACAGAGGAGACTCTCTCCCATCCAGCCTCAGACCC...CACGTTAGATCTCATTCTGGGAAAGAAGCAATTCTGGCCTGATTCGTGATGCTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000207801.2
ENSMUST00000224596.2
CDS-3UTR TCA 90 bp GCAGCCAGACTACCTGAAGAGTCTCCCAGAAGAGGTGTGTTGGTGAGGATGCCATCGATTTTCTTCTTTTaGCAGATGCCTGTCCACCAT +
Preference number: 4 (lower is better)
Translates to: AARLPEESPRRGVLVRMPSIFFF*QMPVHH
Trigger: ATGGTGGACAGGCATCTGTCAAAAGAAGAAAATCGA...TGGCATCCTCACCAACACACCTCTTCTGGGAGACTCTTCAGGTAGTCTGGCTGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000207801.2
ENSMUST00000224596.2
CDS-3UTR GCA 90 bp GAAGAGTCTCCCAGAAGAGGTGTGTTGGTGAGGATGCCATCTAGACGTGTCATCCCACCATTTCTTCTGTaGTGCTGTTTGCTGCTTCTG +
Preference number: 4 (lower is better)
Translates to: EESPRRGVLVRMPSRRVIPPFLL*CCLLLL
Trigger: CAGAAGCAGCAAACAGCAGCACAGAAGAAATGGTGG...GATGACACGTCTAGATGGCATCCTCACCAACACACCTCTTCTGGGAGACTCTTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000207801.2
ENSMUST00000224596.2
CDS-3UTR GCA 90 bp AGCCAAACCTCAAGGTGTCAGGAAAGCTTGGGTCTAGGAGACCATAGTACTCTCCCTGCATTTCTCAGCTaGAACAGCTGGAAGCGTTTG +
Preference number: 4 (lower is better)
Translates to: SQTSRCQESLGLGDHSTLPAFLS*NSWKRL
Trigger: CAAACGCTTCCAGCTGTTGCAGCTGAGAAATGCAGG...GAGAGTACTATGGTCTCCTAGACCCAAGCTTTCCTGACACCTTGAGGTTTGGCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000207801.2
ENSMUST00000224596.2
CDS-3UTR GCA 90 bp AGCCAAACCTCAAGGTGTCAGGAAAGCTTGGGTCTAGGAGACCATAGTACTCTCCACAGCATCAATGACTaGCTGGACATCTGTGTAGGG +
Preference number: 4 (lower is better)
Translates to: SQTSRCQESLGLGDHSTLHSIND*LDICVG
Trigger: CCCTACACAGATGTCCAGGCAGTCATTGATGCTGTG...GAGAGTACTATGGTCTCCTAGACCCAAGCTTTCCTGACACCTTGAGGTTTGGCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000207801.2
ENSMUST00000224596.2
CDS-3UTR CCA 90 bp GAGCATCACGAATCAGGCCAGAATTGCTTCTTTCCCAGAATGAGATCTAACGTGCTGTGTAGCAGGGAGTaGTCCTTTTCCCTTTCGGCC +
Preference number: 4 (lower is better)
Translates to: EHHESGQNCFFPRMRSNVLCSRE*SFSLSA
Trigger: GGCCGAAAGGGAAAAGGACCACTCCCTGCTACACAG...CACGTTAGATCTCATTCTGGGAAAGAAGCAATTCTGGCCTGATTCGTGATGCTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000207801.2
ENSMUST00000224596.2
CDS-3UTR CCA 90 bp CCTGACCTCCACAAGTTGAGCATCACGAATCAGGCCAGAATTGCTTCTTTCCCAGGAAGGTACATTCTTTaGGGTTCTGCCCACTGCAGT +
Preference number: 4 (lower is better)
Translates to: PDLHKLSITNQARIASFPGRYIL*GSAHCS
Trigger: ACTGCAGTGGGCAGAACCCCAAAGAATGTACCTTCC...TGGGAAAGAAGCAATTCTGGCCTGATTCGTGATGCTCAACTTGTGGAGGTCAGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000207801.2
ENSMUST00000224596.2
CDS-3UTR CCA 90 bp GAAGAGTCTCCCAGAAGAGGTGTGTTGGTGAGGATGCCATCTAGACGTGTCATCACATTGCCCCGTCGATaGATTCCAAAGCAAACACTC +
Preference number: 4 (lower is better)
Translates to: EESPRRGVLVRMPSRRVITLPRR*IPKQTL
Trigger: GAGTGTTTGCTTTGGAATCCATCGACGGGGCAATGT...GATGACACGTCTAGATGGCATCCTCACCAACACACCTCTTCTGGGAGACTCTTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000207801.2
ENSMUST00000224596.2
CDS-3UTR TCA 90 bp GAAGAGTCTCCCAGAAGAGGTGTGTTGGTGAGGATGCCATCTAGACGTGTCATCTTGTCAATTCTGCTGTaGAAGAAAGCTGTGGCACCA +
Preference number: 4 (lower is better)
Translates to: EESPRRGVLVRMPSRRVILSILL*KKAVAP
Trigger: TGGTGCCACAGCTTTCTTTCACAGCAGAATTGACAA...GATGACACGTCTAGATGGCATCCTCACCAACACACCTCTTCTGGGAGACTCTTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000207801.2
ENSMUST00000224596.2
CDS-3UTR GCA 90 bp GAAGAGTCTCCCAGAAGAGGTGTGTTGGTGAGGATGCCATCTAGACGTGTCATCACAGCTGGAAGCGTTTaGTCCTTTCCATTTCTTCCT +
Preference number: 4 (lower is better)
Translates to: EESPRRGVLVRMPSRRVITAGSV*SFPFLP
Trigger: AGGAAGAAATGGAAAGGAGCAAACGCTTCCAGCTGT...GATGACACGTCTAGATGGCATCCTCACCAACACACCTCTTCTGGGAGACTCTTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000207801.2
ENSMUST00000224596.2
CDS-3UTR GCA 90 bp GACCTCCACAAGTTGAGCATCACGAATCAGGCCAGAATTGCTTCTTTCCCAGAACCTGCATTTCTCAGCTaGAACAGCTGGAAGCGTTTG +
Preference number: 4 (lower is better)
Translates to: DLHKLSITNQARIASFPEPAFLS*NSWKRL
Trigger: CAAACGCTTCCAGCTGTTGCAGCTGAGAAATGCAGG...TTCTGGGAAAGAAGCAATTCTGGCCTGATTCGTGATGCTCAACTTGTGGAGGTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000207801.2
ENSMUST00000224596.2
CDS-3UTR GCA 90 bp CTTGAAAATAAGCAGCCAAACCTCAAGGTGTCAGGAAAGCTTGGGTCTAGGAGATCCCAGGGTCACCAATaGCTTCTTCCCGAAGTACAG +
Preference number: 4 (lower is better)
Translates to: LENKQPNLKVSGKLGSRRSQGHQ*LLPEVQ
Trigger: CTGTACTTCGGGAAGAAGGCATTGGTGACCCTGGGA...TCTCCTAGACCCAAGCTTTCCTGACACCTTGAGGTTTGGCTGCTTATTTTCAAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000207801.2
ENSMUST00000224596.2
CDS-3UTR GCA 90 bp GAGCATCACGAATCAGGCCAGAATTGCTTCTTTCCCAGAATGAGATCTAACGTGCAGCACACTACAGTATaGAGAGCTCAGCGACTGCGA +
Preference number: 4 (lower is better)
Translates to: EHHESGQNCFFPRMRSNVQHTTV*RAQRLR
Trigger: TCGCAGTCGCTGAGCTCTGCATACTGTAGTGTGCTG...CACGTTAGATCTCATTCTGGGAAAGAAGCAATTCTGGCCTGATTCGTGATGCTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000224596.2
CDS-3UTR CCA 90 bp ATTGATAAACTTGAAAATAAGCAGCCAAACCTCAAGGTGTCAGGAAAGCTTGGGAGAGCCGGAGCAGCCTaGCACACAGGACGTGTTCCT +
Preference number: 4 (lower is better)
Translates to: IDKLENKQPNLKVSGKLGRAGAA*HTGRVP
Trigger: AGGAACACGTCCTGTGTGCCAGGCTGCTCCGGCTCT...CCCAAGCTTTCCTGACACCTTGAGGTTTGGCTGCTTATTTTCAAGTTTATCAAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000207801.2
ENSMUST00000224596.2
CDS-3UTR CCA 90 bp AGCCAAACCTCAAGGTGTCAGGAAAGCTTGGGTCTAGGAGACCATAGTACTCTCTATGTGGATCAATCCTaGCATCATCTGCCCACTCAC +
Preference number: 4 (lower is better)
Translates to: SQTSRCQESLGLGDHSTLYVDQS*HHLPTH
Trigger: GTGAGTGGGCAGATGATGCCAGGATTGATCCACATA...GAGAGTACTATGGTCTCCTAGACCCAAGCTTTCCTGACACCTTGAGGTTTGGCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000207801.2
ENSMUST00000224596.2
CDS-3UTR CCA 90 bp TGCTTCTTTCCCAGAATGAGATCTAACGTGGACTGCAGTACACAAAGCAGCCAGGGAAGGTACATTCTTTaGGGTTCTGCCCACTGCAGT +
Preference number: 4 (lower is better)
Translates to: CFFPRMRSNVDCSTQSSQGRYIL*GSAHCS
Trigger: ACTGCAGTGGGCAGAACCCCAAAGAATGTACCTTCC...CTGGCTGCTTTGTGTACTGCAGTCCACGTTAGATCTCATTCTGGGAAAGAAGCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000207801.2
ENSMUST00000224596.2
CDS-3UTR TCA 90 bp GCAGCCAGACTACCTGAAGAGTCTCCCAGAAGAGGTGTGTTGGTGAGGATGCCAGCTGTTTGCTGCTTCTaGCATCTTTTTAAAAATCTC +
Preference number: 4 (lower is better)
Translates to: AARLPEESPRRGVLVRMPAVCCF*HLFKNL
Trigger: GAGATTTTTAAAAAGATGTCAGAAGCAGCAAACAGC...TGGCATCCTCACCAACACACCTCTTCTGGGAGACTCTTCAGGTAGTCTGGCTGC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENSMUST00000207801.2
ENSMUST00000224596.2
CDS-3UTR TCA 90 bp TGCTTCTTTCCCAGAATGAGATCTAACGTGGACTGCAGTACACAAAGCAGCCAGAAGTCTTTGTATCAGTaGGTGGCTCAGCTGAGGACT +
Preference number: 4 (lower is better)
Translates to: CFFPRMRSNVDCSTQSSQKSLYQ*VAQLRT
Trigger: AGTCCTCAGCTGAGCCACTCACTGATACAAAGACTT...CTGGCTGCTTTGTGTACTGCAGTCCACGTTAGATCTCATTCTGGGAAAGAAGCA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000207801.2
ENSMUST00000224596.2
CDS-3UTR TCA 90 bp AGCCAAACCTCAAGGTGTCAGGAAAGCTTGGGTCTAGGAGACCATAGTACTCTCAGATGCTCTGGGCTGTaGCTTTTCTTCTTTCTTTCC +
Preference number: 4 (lower is better)
Translates to: SQTSRCQESLGLGDHSTLRCSGL*LFFFLS
Trigger: GGAAAGAAAGAAGAAAAGTCACAGCCCAGAGCATCT...GAGAGTACTATGGTCTCCTAGACCCAAGCTTTCCTGACACCTTGAGGTTTGGCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000207801.2
ENSMUST00000224596.2
CDS-3UTR TCA 90 bp GCAGCCAGACTACCTGAAGAGTCTCCCAGAAGAGGTGTGTTGGTGAGGATGCCAGTGACATATGATATCTaGGGTTCAATCGTAGCAAAA +
Preference number: 4 (lower is better)
Translates to: AARLPEESPRRGVLVRMPVTYDI*GSIVAK
Trigger: TTTTGCTACGATTGAACCTCAGATATCATATGTCAC...TGGCATCCTCACCAACACACCTCTTCTGGGAGACTCTTCAGGTAGTCTGGCTGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000207801.2
ENSMUST00000224596.2
CDS-3UTR TCA 90 bp GAAGAGTCTCCCAGAAGAGGTGTGTTGGTGAGGATGCCATCTAGACGTGTCATCACTAATGCAGCACTCTaGTGTCATCCATATGTCAGA +
Preference number: 4 (lower is better)
Translates to: EESPRRGVLVRMPSRRVITNAAL*CHPYVR
Trigger: TCTGACATATGGATGACATCAGAGTGCTGCATTAGT...GATGACACGTCTAGATGGCATCCTCACCAACACACCTCTTCTGGGAGACTCTTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000207801.2
ENSMUST00000224596.2
CDS-3UTR TCA 90 bp CCTGACCTCCACAAGTTGAGCATCACGAATCAGGCCAGAATTGCTTCTTTCCCACCAGAAGCTCTCTTTTaGGTAGTCAAACTGTACAGC +
Preference number: 4 (lower is better)
Translates to: PDLHKLSITNQARIASFPPEALF*VVKLYS
Trigger: GCTGTACAGTTTGACTACTCAAAAGAGAGCTTCTGG...TGGGAAAGAAGCAATTCTGGCCTGATTCGTGATGCTCAACTTGTGGAGGTCAGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000207801.2
ENSMUST00000224596.2
CDS-3UTR TCA 90 bp CTTGAAAATAAGCAGCCAAACCTCAAGGTGTCAGGAAAGCTTGGGTCTAGGAGAGGTACACAGCATCAATaGCTGCCTGGACATCTGTGT +
Preference number: 4 (lower is better)
Translates to: LENKQPNLKVSGKLGSRRGTQHQ*LPGHLC
Trigger: ACACAGATGTCCAGGCAGTCATTGATGCTGTGTACC...TCTCCTAGACCCAAGCTTTCCTGACACCTTGAGGTTTGGCTGCTTATTTTCAAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000207801.2
ENSMUST00000224596.2
CDS-3UTR TCA 90 bp GCAGCCAGACTACCTGAAGAGTCTCCCAGAAGAGGTGTGTTGGTGAGGATGCCAAATAGAGTTCACATCTaGAATGGGTATATCCTTCTG +
Preference number: 4 (lower is better)
Translates to: AARLPEESPRRGVLVRMPNRVHI*NGYILL
Trigger: CAGAAGGATATACCCATTTCAGATGTGAACTCTATT...TGGCATCCTCACCAACACACCTCTTCTGGGAGACTCTTCAGGTAGTCTGGCTGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000224596.2
CDS-3UTR GCA 90 bp GACCTCCACAAGTTGAGCATCACGAATCAGGCCAGAATTGCTTCTTTCCCAGAACCACCATTTCTTCTGTaGTGCTGTTTGCTGCTTCTG +
Preference number: 4 (lower is better)
Translates to: DLHKLSITNQARIASFPEPPFLL*CCLLLL
Trigger: CAGAAGCAGCAAACAGCAGCACAGAAGAAATGGTGG...TTCTGGGAAAGAAGCAATTCTGGCCTGATTCGTGATGCTCAACTTGTGGAGGTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000207801.2
ENSMUST00000224596.2
CDS-3UTR GCA 90 bp GATAAACTTGAAAATAAGCAGCCAAACCTCAAGGTGTCAGGAAAGCTTGGGTCTCCTTTCGGCAGTTTCTaGTGGCTGGCCACTGGAGAA +
Preference number: 4 (lower is better)
Translates to: DKLENKQPNLKVSGKLGSPFGSF*WLATGE
Trigger: TTCTCCAGTGGCCAGCCAGCAGAAACTGCCGAAAGG...AGACCCAAGCTTTCCTGACACCTTGAGGTTTGGCTGCTTATTTTCAAGTTTATC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000207801.2
ENSMUST00000224596.2
CDS-3UTR GCA 90 bp ATTGATAAACTTGAAAATAAGCAGCCAAACCTCAAGGTGTCAGGAAAGCTTGGGGAGACGCTCTGCCTCTaGCTGTCCTGCAAAGACTCG +
Preference number: 4 (lower is better)
Translates to: IDKLENKQPNLKVSGKLGETLCL*LSCKDS
Trigger: CGAGTCTTTGCAGGACAGGCAGAGGCAGAGCGTCTC...CCCAAGCTTTCCTGACACCTTGAGGTTTGGCTGCTTATTTTCAAGTTTATCAAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000207801.2
ENSMUST00000224596.2
CDS-3UTR CCA 90 bp GAAGAGTCTCCCAGAAGAGGTGTGTTGGTGAGGATGCCATCTAGACGTGTCATCAAACTGCACCTTTACTaGGGTGCTTGTAAATCCTTG +
Preference number: 4 (lower is better)
Translates to: EESPRRGVLVRMPSRRVIKLHLY*GACKSL
Trigger: CAAGGATTTACAAGCACCCCAGTAAAGGTGCAGTTT...GATGACACGTCTAGATGGCATCCTCACCAACACACCTCTTCTGGGAGACTCTTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000207801.2
ENSMUST00000224596.2
CDS-3UTR CCA 90 bp CCTGACCTCCACAAGTTGAGCATCACGAATCAGGCCAGAATTGCTTCTTTCCCAGTAGTCTGGGTTATGTaGATCAATCCTGGCATCATC +
Preference number: 4 (lower is better)
Translates to: PDLHKLSITNQARIASFPVVWVM*INPGII
Trigger: GATGATGCCAGGATTGATCCACATAACCCAGACTAC...TGGGAAAGAAGCAATTCTGGCCTGATTCGTGATGCTCAACTTGTGGAGGTCAGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000207801.2
ENSMUST00000224596.2
CDS-3UTR CCA 90 bp GAAGAGTCTCCCAGAAGAGGTGTGTTGGTGAGGATGCCATCTAGACGTGTCATCATCAACCTTCTCACCTaGAAGACTATGTCTGGAATC +
Preference number: 4 (lower is better)
Translates to: EESPRRGVLVRMPSRRVIINLLT*KTMSGI
Trigger: GATTCCAGACATAGTCTTCCAGGTGAGAAGGTTGAT...GATGACACGTCTAGATGGCATCCTCACCAACACACCTCTTCTGGGAGACTCTTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000207801.2
CDS-3UTR TCA 90 bp GAAGAGTCTCCCAGAAGAGGTGTGTTGGTGAGGATGCCATCTAGACGTGTCATCACTCAGGATGAAAAATaGAAGACCTTCATCCAGCAA +
Preference number: 4 (lower is better)
Translates to: EESPRRGVLVRMPSRRVITQDEK*KTFIQQ
Trigger: TTGCTGGATGAAGGTCTTTCATTTTTCATCCTGAGT...GATGACACGTCTAGATGGCATCCTCACCAACACACCTCTTCTGGGAGACTCTTC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000207801.2
ENSMUST00000224596.2
CDS-3UTR TCA 90 bp GAGCATCACGAATCAGGCCAGAATTGCTTCTTTCCCAGAATGAGATCTAACGTGTGGTACATTTCCCTCTaGCCATCCATCCTGTCTCTA +
Preference number: 4 (lower is better)
Translates to: EHHESGQNCFFPRMRSNVWYISL*PSILSL
Trigger: TAGAGACAGGATGGATGGTCAGAGGGAAATGTACCA...CACGTTAGATCTCATTCTGGGAAAGAAGCAATTCTGGCCTGATTCGTGATGCTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000207801.2
ENSMUST00000224596.2
CDS-3UTR TCA 90 bp CCTGACCTCCACAAGTTGAGCATCACGAATCAGGCCAGAATTGCTTCTTTCCCACTTCTTTCTTTCCTCTaGGGTTTTAACTTCCGTCGT +
Preference number: 4 (lower is better)
Translates to: PDLHKLSITNQARIASFPLLSFL*GFNFRR
Trigger: ACGACGGAAGTTAAAACCTCAGAGGAAAGAAAGAAG...TGGGAAAGAAGCAATTCTGGCCTGATTCGTGATGCTCAACTTGTGGAGGTCAGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000207801.2
ENSMUST00000224596.2
CDS-3UTR TCA 90 bp TGCTTCTTTCCCAGAATGAGATCTAACGTGGACTGCAGTACACAAAGCAGCCAGAGATGCTCTGGGCTGTaGCTTTTCTTCTTTCTTTCC +
Preference number: 4 (lower is better)
Translates to: CFFPRMRSNVDCSTQSSQRCSGL*LFFFLS
Trigger: GGAAAGAAAGAAGAAAAGTCACAGCCCAGAGCATCT...CTGGCTGCTTTGTGTACTGCAGTCCACGTTAGATCTCATTCTGGGAAAGAAGCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000207801.2
ENSMUST00000224596.2
CDS-3UTR TCA 90 bp AGCCAAACCTCAAGGTGTCAGGAAAGCTTGGGTCTAGGAGACCATAGTACTCTCTTTTGTATGTATGAGTaGGCACTGCAGCTCTTGAGA +
Preference number: 4 (lower is better)
Translates to: SQTSRCQESLGLGDHSTLFCMYE*ALQLLR
Trigger: TCTCAAGAGCTGCAGTGCTCACTCATACATACAAAA...GAGAGTACTATGGTCTCCTAGACCCAAGCTTTCCTGACACCTTGAGGTTTGGCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000224596.2
CDS-3UTR TCA 90 bp ATTGATAAACTTGAAAATAAGCAGCCAAACCTCAAGGTGTCAGGAAAGCTTGGGCTGCTGCAGAAGGGCTaGGAAAGGGAAGCTGATGGA +
Preference number: 4 (lower is better)
Translates to: IDKLENKQPNLKVSGKLGLLQKG*EREADG
Trigger: TCCATCAGCTTCCCTTTCTCAGCCCTTCTGCAGCAG...CCCAAGCTTTCCTGACACCTTGAGGTTTGGCTGCTTATTTTCAAGTTTATCAAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000224596.2
CDS-3UTR GCA 90 bp GATAAACTTGAAAATAAGCAGCCAAACCTCAAGGTGTCAGGAAAGCTTGGGTCTACTCCCGCTTGGTTCTaGTCATCCCACGTGTTCGTT +
Preference number: 4 (lower is better)
Translates to: DKLENKQPNLKVSGKLGSTPAWF*SSHVFV
Trigger: AACGAACACGTGGGATGAGCAGAACCAAGCGGGAGT...AGACCCAAGCTTTCCTGACACCTTGAGGTTTGGCTGCTTATTTTCAAGTTTATC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000207801.2
ENSMUST00000224596.2
CDS-3UTR GCA 90 bp CTTGAAAATAAGCAGCCAAACCTCAAGGTGTCAGGAAAGCTTGGGTCTAGGAGACATTCTTTGGGGTTCTaGCCACTGCAGTCTTCTCTA +
Preference number: 4 (lower is better)
Translates to: LENKQPNLKVSGKLGSRRHSLGF*PLQSSL
Trigger: TAGAGAAGACTGCAGTGGGCAGAACCCCAAAGAATG...TCTCCTAGACCCAAGCTTTCCTGACACCTTGAGGTTTGGCTGCTTATTTTCAAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000207801.2
ENSMUST00000224596.2
CDS-3UTR GCA 90 bp CCAGCATTGATAAACTTGAAAATAAGCAGCCAAACCTCAAGGTGTCAGGAAAGCTCCCAGGGTCACCAATaGCTTCTTCCCGAAGTACAG +
Preference number: 4 (lower is better)
Translates to: PALINLKISSQTSRCQESSQGHQ*LLPEVQ
Trigger: CTGTACTTCGGGAAGAAGGCATTGGTGACCCTGGGA...GCTTTCCTGACACCTTGAGGTTTGGCTGCTTATTTTCAAGTTTATCAATGCTGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000207801.2
ENSMUST00000224596.2
CDS-3UTR GCA 90 bp TGCTTCTTTCCCAGAATGAGATCTAACGTGGACTGCAGTACACAAAGCAGCCAGGGGGAGATACTGAGGTaGGAGAAACCTGTTTATTGT +
Preference number: 4 (lower is better)
Translates to: CFFPRMRSNVDCSTQSSQGEILR*EKPVYC
Trigger: ACAATAAACAGGTTTCTCGCACCTCAGTATCTCCCC...CTGGCTGCTTTGTGTACTGCAGTCCACGTTAGATCTCATTCTGGGAAAGAAGCA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000224596.2
CDS-3UTR GCA 90 bp TGCTTCTTTCCCAGAATGAGATCTAACGTGGACTGCAGTACACAAAGCAGCCAGGGGTATATCCTTCTGTaGCTGACTTTCATACTCCTG +
Preference number: 4 (lower is better)
Translates to: CFFPRMRSNVDCSTQSSQGYILL*LTFILL
Trigger: CAGGAGTATGAAAGTCAGGCACAGAAGGATATACCC...CTGGCTGCTTTGTGTACTGCAGTCCACGTTAGATCTCATTCTGGGAAAGAAGCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000224596.2
CDS-3UTR GCA 90 bp AGCCAAACCTCAAGGTGTCAGGAAAGCTTGGGTCTAGGAGACCATAGTACTCTCCATCTTACATTTCAGTaGCCTCTCTATCCTGCTCTT +
Preference number: 4 (lower is better)
Translates to: SQTSRCQESLGLGDHSTLHLTFQ*PLYPAL
Trigger: AAGAGCAGGATAGAGAGGGCACTGAAATGTAAGATG...GAGAGTACTATGGTCTCCTAGACCCAAGCTTTCCTGACACCTTGAGGTTTGGCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000224596.2
CDS-3UTR CCA 90 bp AGCCAAACCTCAAGGTGTCAGGAAAGCTTGGGTCTAGGAGACCATAGTACTCTCTGTGAAAGAAAGCTGTaGCACCAGAGTAATTGGCTT +
Preference number: 4 (lower is better)
Translates to: SQTSRCQESLGLGDHSTLCERKL*HQSNWL
Trigger: AAGCCAATTACTCTGGTGCCACAGCTTTCTTTCACA...GAGAGTACTATGGTCTCCTAGACCCAAGCTTTCCTGACACCTTGAGGTTTGGCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000207801.2
ENSMUST00000224596.2
CDS-3UTR CCA 90 bp GCAGCCAGACTACCTGAAGAGTCTCCCAGAAGAGGTGTGTTGGTGAGGATGCCAGCACAAATGAACACTTaGATAAGTTTGTCAATTCTG +
Preference number: 4 (lower is better)
Translates to: AARLPEESPRRGVLVRMPAQMNT*ISLSIL
Trigger: CAGAATTGACAAACTTATCCAAGTGTTCATTTGTGC...TGGCATCCTCACCAACACACCTCTTCTGGGAGACTCTTCAGGTAGTCTGGCTGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000207801.2
CDS-3UTR CCA 90 bp GACCTCCACAAGTTGAGCATCACGAATCAGGCCAGAATTGCTTCTTTCCCAGAACCATCAGAGATGCTCTaGGCTGTGACTTTTCTTCTT +
Preference number: 4 (lower is better)
Translates to: DLHKLSITNQARIASFPEPSEML*AVTFLL
Trigger: AAGAAGAAAAGTCACAGCCCAGAGCATCTCTGATGG...TTCTGGGAAAGAAGCAATTCTGGCCTGATTCGTGATGCTCAACTTGTGGAGGTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000207801.2
ENSMUST00000224596.2
CDS-3UTR TCA 90 bp GACCTCCACAAGTTGAGCATCACGAATCAGGCCAGAATTGCTTCTTTCCCAGAATCCGTCGTGGTTCAATaGATTTACAAATGGCATCTG +
Preference number: 4 (lower is better)
Translates to: DLHKLSITNQARIASFPESVVVQ*IYKWHL
Trigger: CAGATGCCATTTGTAAATTCATTGAACCACGACGGA...TTCTGGGAAAGAAGCAATTCTGGCCTGATTCGTGATGCTCAACTTGTGGAGGTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000207801.2
ENSMUST00000224596.2
CDS-3UTR TCA 90 bp GATAAACTTGAAAATAAGCAGCCAAACCTCAAGGTGTCAGGAAAGCTTGGGTCTGGTACACAGCATCAATaGCTGCCTGGACATCTGTGT +
Preference number: 4 (lower is better)
Translates to: DKLENKQPNLKVSGKLGSGTQHQ*LPGHLC
Trigger: ACACAGATGTCCAGGCAGTCATTGATGCTGTGTACC...AGACCCAAGCTTTCCTGACACCTTGAGGTTTGGCTGCTTATTTTCAAGTTTATC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000207801.2
ENSMUST00000224596.2
CDS-3UTR GCA 90 bp AGCCAAACCTCAAGGTGTCAGGAAAGCTTGGGTCTAGGAGACCATAGTACTCTCTCTTCTTTTGACAGATaGCTGTCCACCATTTCTTCT +
Preference number: 4 (lower is better)
Translates to: SQTSRCQESLGLGDHSTLSSFDR*LSTISS
Trigger: AGAAGAAATGGTGGACAGGCATCTGTCAAAAGAAGA...GAGAGTACTATGGTCTCCTAGACCCAAGCTTTCCTGACACCTTGAGGTTTGGCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000207801.2
ENSMUST00000224596.2
CDS-3UTR GCA 90 bp AGCCAAACCTCAAGGTGTCAGGAAAGCTTGGGTCTAGGAGACCATAGTACTCTCAAGATTCCTTGCTCATaGAGAGCCTATAATTCCAAG +
Preference number: 4 (lower is better)
Translates to: SQTSRCQESLGLGDHSTLKIPCS*RAYNSK
Trigger: CTTGGAATTATAGGCTCTGCATGAGCAAGGAATCTT...GAGAGTACTATGGTCTCCTAGACCCAAGCTTTCCTGACACCTTGAGGTTTGGCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000207801.2
ENSMUST00000224596.2
CDS-3UTR GCA 90 bp ATTGATAAACTTGAAAATAAGCAGCCAAACCTCAAGGTGTCAGGAAAGCTTGGGACTCCCGCTTGGTTCTaGTCATCCCACGTGTTCGTT +
Preference number: 4 (lower is better)
Translates to: IDKLENKQPNLKVSGKLGTPAWF*SSHVFV
Trigger: AACGAACACGTGGGATGAGCAGAACCAAGCGGGAGT...CCCAAGCTTTCCTGACACCTTGAGGTTTGGCTGCTTATTTTCAAGTTTATCAAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000207801.2
ENSMUST00000224596.2
CDS-3UTR GCA 90 bp CCAGCATTGATAAACTTGAAAATAAGCAGCCAAACCTCAAGGTGTCAGGAAAGCCACAGCATCAATGACTaGCTGGACATCTGTGTAGGG +
Preference number: 4 (lower is better)
Translates to: PALINLKISSQTSRCQESHSIND*LDICVG
Trigger: CCCTACACAGATGTCCAGGCAGTCATTGATGCTGTG...GCTTTCCTGACACCTTGAGGTTTGGCTGCTTATTTTCAAGTTTATCAATGCTGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000207801.2
ENSMUST00000224596.2
CDS-3UTR GCA 90 bp CTTGAAAATAAGCAGCCAAACCTCAAGGTGTCAGGAAAGCTTGGGTCTAGGAGAATTCCAGGACAGTCTTaGCTTTCAGCTCTGTCTTGT +
Preference number: 4 (lower is better)
Translates to: LENKQPNLKVSGKLGSRRIPGQS*LSALSC
Trigger: ACAAGACAGAGCTGAAAGGCAAGACTGTCCTGGAAT...TCTCCTAGACCCAAGCTTTCCTGACACCTTGAGGTTTGGCTGCTTATTTTCAAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000224596.2
CDS-3UTR GCA 90 bp CCAGCATTGATAAACTTGAAAATAAGCAGCCAAACCTCAAGGTGTCAGGAAAGCCCACTAATCTCAGGCTaGTGCAGAAGGGCTGAGAAA +
Preference number: 4 (lower is better)
Translates to: PALINLKISSQTSRCQESPLISG*CRRAEK
Trigger: TTTCTCAGCCCTTCTGCAGCAGCCTGAGATTAGTGG...GCTTTCCTGACACCTTGAGGTTTGGCTGCTTATTTTCAAGTTTATCAATGCTGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000224596.2
CDS-3UTR CCA 90 bp CTTGAAAATAAGCAGCCAAACCTCAAGGTGTCAGGAAAGCTTGGGTCTAGGAGAGTAGTCTGGGTTATGTaGATCAATCCTGGCATCATC +
Preference number: 4 (lower is better)
Translates to: LENKQPNLKVSGKLGSRRVVWVM*INPGII
Trigger: GATGATGCCAGGATTGATCCACATAACCCAGACTAC...TCTCCTAGACCCAAGCTTTCCTGACACCTTGAGGTTTGGCTGCTTATTTTCAAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000207801.2
ENSMUST00000224596.2
CDS-3UTR CCA 90 bp GACCTCCACAAGTTGAGCATCACGAATCAGGCCAGAATTGCTTCTTTCCCAGAATATTTGGGGATTTCCTaGCCTTTGTGTCTCAAACAC +
Preference number: 4 (lower is better)
Translates to: DLHKLSITNQARIASFPEYLGIS*PLCLKH
Trigger: GTGTTTGAGACACAAAGGCCAGGAAATCCCCAAATA...TTCTGGGAAAGAAGCAATTCTGGCCTGATTCGTGATGCTCAACTTGTGGAGGTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000207801.2
ENSMUST00000224596.2
CDS-3UTR CCA 90 bp TGCTTCTTTCCCAGAATGAGATCTAACGTGGACTGCAGTACACAAAGCAGCCAGCAAGACGGAAATATTTaGGGATTTCCTGGCCTTTGT +
Preference number: 4 (lower is better)
Translates to: CFFPRMRSNVDCSTQSSQQDGNI*GFPGLC
Trigger: ACAAAGGCCAGGAAATCCCCAAATATTTCCGTCTTG...CTGGCTGCTTTGTGTACTGCAGTCCACGTTAGATCTCATTCTGGGAAAGAAGCA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000207801.2
ENSMUST00000224596.2
CDS-3UTR CCA 90 bp CTTGAAAATAAGCAGCCAAACCTCAAGGTGTCAGGAAAGCTTGGGTCTAGGAGACCATCAGAGATGCTCTaGGCTGTGACTTTTCTTCTT +
Preference number: 4 (lower is better)
Translates to: LENKQPNLKVSGKLGSRRPSEML*AVTFLL
Trigger: AAGAAGAAAAGTCACAGCCCAGAGCATCTCTGATGG...TCTCCTAGACCCAAGCTTTCCTGACACCTTGAGGTTTGGCTGCTTATTTTCAAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000207801.2
ENSMUST00000224596.2
CDS-3UTR CCA 90 bp AGCCAAACCTCAAGGTGTCAGGAAAGCTTGGGTCTAGGAGACCATAGTACTCTCTTGCAAGGGACAAAATaGGTCAAACTGCTTATGACA +
Preference number: 4 (lower is better)
Translates to: SQTSRCQESLGLGDHSTLLQGTK*VKLLMT
Trigger: TGTCATAAGCAGTTTGACCCATTTTGTCCCTTGCAA...GAGAGTACTATGGTCTCCTAGACCCAAGCTTTCCTGACACCTTGAGGTTTGGCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000207801.2
ENSMUST00000224596.2
3UTR CAA 72 bp AAAATAAGCAGCCAAACCTCAAGGTGTCAGGAAAGCTaGGGTCTAGGAGACCATAGTACTCTCTGCCTTTTC +
Preference number: 4 (lower is better)
Translates to: KISSQTSRCQES*GLGDHSTLCLF
Trigger: GAAAAGGCAGAGAGTACTATGGTCTCCTAGACCCAAGCTTTCCTGACACCTTGAGGTTTGGCTGCTTATTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000207801.2
ENSMUST00000224596.2
CDS-3UTR TCA 90 bp AGCCAAACCTCAAGGTGTCAGGAAAGCTTGGGTCTAGGAGACCATAGTACTCTCGCTGTTTGCTGCTTCTaGCATCTTTTTAAAAATCTC +
Preference number: 4 (lower is better)
Translates to: SQTSRCQESLGLGDHSTLAVCCF*HLFKNL
Trigger: GAGATTTTTAAAAAGATGTCAGAAGCAGCAAACAGC...GAGAGTACTATGGTCTCCTAGACCCAAGCTTTCCTGACACCTTGAGGTTTGGCT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENSMUST00000207801.2
ENSMUST00000224596.2
CDS-3UTR TCA 90 bp CTTGAAAATAAGCAGCCAAACCTCAAGGTGTCAGGAAAGCTTGGGTCTAGGAGACTTCTTTCTTTCCTCTaGGGTTTTAACTTCCGTCGT +
Preference number: 4 (lower is better)
Translates to: LENKQPNLKVSGKLGSRRLLSFL*GFNFRR
Trigger: ACGACGGAAGTTAAAACCTCAGAGGAAAGAAAGAAG...TCTCCTAGACCCAAGCTTTCCTGACACCTTGAGGTTTGGCTGCTTATTTTCAAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000207801.2
ENSMUST00000224596.2
CDS-3UTR TCA 90 bp CCTGACCTCCACAAGTTGAGCATCACGAATCAGGCCAGAATTGCTTCTTTCCCAATTGTACGTGACATATaGTATCTGAGGTTCAATCGT +
Preference number: 4 (lower is better)
Translates to: PDLHKLSITNQARIASFPIVRDI*YLRFNR
Trigger: ACGATTGAACCTCAGATATCATATGTCACGTACAAT...TGGGAAAGAAGCAATTCTGGCCTGATTCGTGATGCTCAACTTGTGGAGGTCAGG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000207801.2
ENSMUST00000224596.2
CDS-3UTR TCA 90 bp TGCTTCTTTCCCAGAATGAGATCTAACGTGGACTGCAGTACACAAAGCAGCCAGGTTGCATTCGAGTCATaGAGAAATATATCCAGAAGC +
Preference number: 4 (lower is better)
Translates to: CFFPRMRSNVDCSTQSSQVAFES*RNISRS
Trigger: GCTTCTGGATATATTTCTTCATGACTCGAATGCAAC...CTGGCTGCTTTGTGTACTGCAGTCCACGTTAGATCTCATTCTGGGAAAGAAGCA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000207801.2
ENSMUST00000224596.2
CDS-3UTR GCA 90 bp GACCTCCACAAGTTGAGCATCACGAATCAGGCCAGAATTGCTTCTTTCCCAGAAAAGATTCCTTGCTCATaGAGAGCCTATAATTCCAAG +
Preference number: 4 (lower is better)
Translates to: DLHKLSITNQARIASFPEKIPCS*RAYNSK
Trigger: CTTGGAATTATAGGCTCTGCATGAGCAAGGAATCTT...TTCTGGGAAAGAAGCAATTCTGGCCTGATTCGTGATGCTCAACTTGTGGAGGTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000207801.2
ENSMUST00000224596.2
CDS-3UTR GCA 90 bp AGCCAAACCTCAAGGTGTCAGGAAAGCTTGGGTCTAGGAGACCATAGTACTCTCGATTCAAAGATTCCTTaGTCATGCAGAGCCTATAAT +
Preference number: 4 (lower is better)
Translates to: SQTSRCQESLGLGDHSTLDSKIP*SCRAYN
Trigger: ATTATAGGCTCTGCATGAGCAAGGAATCTTTGAATC...GAGAGTACTATGGTCTCCTAGACCCAAGCTTTCCTGACACCTTGAGGTTTGGCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000207801.2
ENSMUST00000224596.2
CDS-3UTR GCA 90 bp CCTGACCTCCACAAGTTGAGCATCACGAATCAGGCCAGAATTGCTTCTTTCCCAAAGTTAAATTCGTCTTaGAACTGCTCAAGACGGAAA +
Preference number: 4 (lower is better)
Translates to: PDLHKLSITNQARIASFPKLNSS*NCSRRK
Trigger: TTTCCGTCTTGAGCAGTTGCAAGACGAATTTAACTT...TGGGAAAGAAGCAATTCTGGCCTGATTCGTGATGCTCAACTTGTGGAGGTCAGG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000207801.2
ENSMUST00000224596.2
CDS-3UTR GCA 90 bp CCAGCATTGATAAACTTGAAAATAAGCAGCCAAACCTCAAGGTGTCAGGAAAGCCATTCTTTGGGGTTCTaGCCACTGCAGTCTTCTCTA +
Preference number: 4 (lower is better)
Translates to: PALINLKISSQTSRCQESHSLGF*PLQSSL
Trigger: TAGAGAAGACTGCAGTGGGCAGAACCCCAAAGAATG...GCTTTCCTGACACCTTGAGGTTTGGCTGCTTATTTTCAAGTTTATCAATGCTGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000207801.2
ENSMUST00000224596.2
CDS-3UTR GCA 90 bp CCTGACCTCCACAAGTTGAGCATCACGAATCAGGCCAGAATTGCTTCTTTCCCAAAACAATCTACACTTTaGAAGGGACAAAATGGGTCA +
Preference number: 4 (lower is better)
Translates to: PDLHKLSITNQARIASFPKQSTL*KGQNGS
Trigger: TGACCCATTTTGTCCCTTGCAAAGTGTAGATTGTTT...TGGGAAAGAAGCAATTCTGGCCTGATTCGTGATGCTCAACTTGTGGAGGTCAGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000207801.2
ENSMUST00000224596.2
CDS-3UTR CCA 90 bp CTTGAAAATAAGCAGCCAAACCTCAAGGTGTCAGGAAAGCTTGGGTCTAGGAGACAGATGCAGATTGCTTaGAGTAACTCTCACTTACTG +
Preference number: 4 (lower is better)
Translates to: LENKQPNLKVSGKLGSRRQMQIA*SNSHLL
Trigger: CAGTAAGTGAGAGTTACTCCAAGCAATCTGCATCTG...TCTCCTAGACCCAAGCTTTCCTGACACCTTGAGGTTTGGCTGCTTATTTTCAAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000207801.2
ENSMUST00000224596.2
CDS-3UTR CCA 90 bp CCAGCATTGATAAACTTGAAAATAAGCAGCCAAACCTCAAGGTGTCAGGAAAGCCATAAAATCCTCATCTaGGCCCTCAGCAGTGTTTCG +
Preference number: 4 (lower is better)
Translates to: PALINLKISSQTSRCQESHKILI*ALSSVS
Trigger: CGAAACACTGCTGAGGGCCCAGATGAGGATTTTATG...GCTTTCCTGACACCTTGAGGTTTGGCTGCTTATTTTCAAGTTTATCAATGCTGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000207801.2
ENSMUST00000224596.2
CDS-3UTR CCA 90 bp GAGCATCACGAATCAGGCCAGAATTGCTTCTTTCCCAGAATGAGATCTAACGTGCAAGACGGAAATATTTaGGGATTTCCTGGCCTTTGT +
Preference number: 4 (lower is better)
Translates to: EHHESGQNCFFPRMRSNVQDGNI*GFPGLC
Trigger: ACAAAGGCCAGGAAATCCCCAAATATTTCCGTCTTG...CACGTTAGATCTCATTCTGGGAAAGAAGCAATTCTGGCCTGATTCGTGATGCTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000207801.2
ENSMUST00000224596.2
CDS-3UTR CCA 90 bp GACCTCCACAAGTTGAGCATCACGAATCAGGCCAGAATTGCTTCTTTCCCAGAACTGGAAGACTATGTCTaGAATCTCATTGTCATAGAG +
Preference number: 4 (lower is better)
Translates to: DLHKLSITNQARIASFPELEDYV*NLIVIE
Trigger: CTCTATGACAATGAGATTCCAGACATAGTCTTCCAG...TTCTGGGAAAGAAGCAATTCTGGCCTGATTCGTGATGCTCAACTTGTGGAGGTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000207801.2
ENSMUST00000224596.2
CDS-3UTR CCA 90 bp TGCTTCTTTCCCAGAATGAGATCTAACGTGGACTGCAGTACACAAAGCAGCCAGTTGCAAGGGACAAAATaGGTCAAACTGCTTATGACA +
Preference number: 4 (lower is better)
Translates to: CFFPRMRSNVDCSTQSSQLQGTK*VKLLMT
Trigger: TGTCATAAGCAGTTTGACCCATTTTGTCCCTTGCAA...CTGGCTGCTTTGTGTACTGCAGTCCACGTTAGATCTCATTCTGGGAAAGAAGCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000207801.2
ENSMUST00000224596.2
CDS-3UTR TCA 90 bp GAGCATCACGAATCAGGCCAGAATTGCTTCTTTCCCAGAATGAGATCTAACGTGACTCAGGATGAAAAATaGAAGACCTTCATCCAGCAA +
Preference number: 4 (lower is better)
Translates to: EHHESGQNCFFPRMRSNVTQDEK*KTFIQQ
Trigger: TTGCTGGATGAAGGTCTTTCATTTTTCATCCTGAGT...CACGTTAGATCTCATTCTGGGAAAGAAGCAATTCTGGCCTGATTCGTGATGCTC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000207801.2
ENSMUST00000224596.2
CDS-3UTR TCA 90 bp GATAAACTTGAAAATAAGCAGCCAAACCTCAAGGTGTCAGGAAAGCTTGGGTCTTTGTCAATTCTGCTGTaGAAGAAAGCTGTGGCACCA +
Preference number: 4 (lower is better)
Translates to: DKLENKQPNLKVSGKLGSLSILL*KKAVAP
Trigger: TGGTGCCACAGCTTTCTTTCACAGCAGAATTGACAA...AGACCCAAGCTTTCCTGACACCTTGAGGTTTGGCTGCTTATTTTCAAGTTTATC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000207801.2
ENSMUST00000224596.2
CDS-3UTR TCA 90 bp GATAAACTTGAAAATAAGCAGCCAAACCTCAAGGTGTCAGGAAAGCTTGGGTCTATATCCTTCTGTGCCTaGCTTTCATACTCCTGGAAG +
Preference number: 4 (lower is better)
Translates to: DKLENKQPNLKVSGKLGSISFCA*LSYSWK
Trigger: CTTCCAGGAGTATGAAAGTCAGGCACAGAAGGATAT...AGACCCAAGCTTTCCTGACACCTTGAGGTTTGGCTGCTTATTTTCAAGTTTATC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000224596.2
CDS-3UTR TCA 90 bp CTTGAAAATAAGCAGCCAAACCTCAAGGTGTCAGGAAAGCTTGGGTCTAGGAGACAGCTCTTGAGACAATaGTCCTCATGTTTTTCAATC +
Preference number: 4 (lower is better)
Translates to: LENKQPNLKVSGKLGSRRQLLRQ*SSCFSI
Trigger: GATTGAAAAACATGAGGATCATTGTCTCAAGAGCTG...TCTCCTAGACCCAAGCTTTCCTGACACCTTGAGGTTTGGCTGCTTATTTTCAAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000224596.2
CDS-3UTR GCA 90 bp GACCTCCACAAGTTGAGCATCACGAATCAGGCCAGAATTGCTTCTTTCCCAGAAGATTCAAAGATTCCTTaGTCATGCAGAGCCTATAAT +
Preference number: 4 (lower is better)
Translates to: DLHKLSITNQARIASFPEDSKIP*SCRAYN
Trigger: ATTATAGGCTCTGCATGAGCAAGGAATCTTTGAATC...TTCTGGGAAAGAAGCAATTCTGGCCTGATTCGTGATGCTCAACTTGTGGAGGTC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000207801.2
ENSMUST00000224596.2
CDS-3UTR GCA 90 bp TGCTTCTTTCCCAGAATGAGATCTAACGTGGACTGCAGTACACAAAGCAGCCAGCAGAGAAGTATGGCATaGTCTTCTTTATTTCCAATG +
Preference number: 4 (lower is better)
Translates to: CFFPRMRSNVDCSTQSSQQRSMA*SSLFPM
Trigger: CATTGGAAATAAAGAAGAGCATGCCATACTTCTCTG...CTGGCTGCTTTGTGTACTGCAGTCCACGTTAGATCTCATTCTGGGAAAGAAGCA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000207801.2
ENSMUST00000224596.2
CDS-3UTR GCA 90 bp GACCTCCACAAGTTGAGCATCACGAATCAGGCCAGAATTGCTTCTTTCCCAGAATTGGCTCTCCTCTTTTaGTCATATAATGAACACTTG +
Preference number: 4 (lower is better)
Translates to: DLHKLSITNQARIASFPELALLF*SYNEHL
Trigger: CAAGTGTTCATTATATGAGCAAAAGAGGAGAGCCAA...TTCTGGGAAAGAAGCAATTCTGGCCTGATTCGTGATGCTCAACTTGTGGAGGTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000224596.2
CDS-3UTR GCA 90 bp GACCTCCACAAGTTGAGCATCACGAATCAGGCCAGAATTGCTTCTTTCCCAGAATTAGATCTTCTACCATaGTTTTATTGGTGTCCGAGT +
Preference number: 4 (lower is better)
Translates to: DLHKLSITNQARIASFPELDLLP*FYWCPS
Trigger: ACTCGGACACCAATAAAAGCATGGTAGAAGATCTAA...TTCTGGGAAAGAAGCAATTCTGGCCTGATTCGTGATGCTCAACTTGTGGAGGTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000224596.2
CDS-3UTR GCA 90 bp CCAGCATTGATAAACTTGAAAATAAGCAGCCAAACCTCAAGGTGTCAGGAAAGCGTGCCCTCTCTATCCTaGTCTTTAGATCTTCTACCA +
Preference number: 4 (lower is better)
Translates to: PALINLKISSQTSRCQESVPSLS*SLDLLP
Trigger: TGGTAGAAGATCTAAAGAGCAGGATAGAGAGGGCAC...GCTTTCCTGACACCTTGAGGTTTGGCTGCTTATTTTCAAGTTTATCAATGCTGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000224596.2
CDS-3UTR CCA 90 bp ATTGATAAACTTGAAAATAAGCAGCCAAACCTCAAGGTGTCAGGAAAGCTTGGGACATTGCCCCGTCGATaGATTCCAAAGCAAACACTC +
Preference number: 4 (lower is better)
Translates to: IDKLENKQPNLKVSGKLGTLPRR*IPKQTL
Trigger: GAGTGTTTGCTTTGGAATCCATCGACGGGGCAATGT...CCCAAGCTTTCCTGACACCTTGAGGTTTGGCTGCTTATTTTCAAGTTTATCAAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000207801.2
ENSMUST00000224596.2
CDS-3UTR TCA 90 bp GATAAACTTGAAAATAAGCAGCCAAACCTCAAGGTGTCAGGAAAGCTTGGGTCTACTAATGCAGCACTCTaGTGTCATCCATATGTCAGA +
Preference number: 4 (lower is better)
Translates to: DKLENKQPNLKVSGKLGSTNAAL*CHPYVR
Trigger: TCTGACATATGGATGACATCAGAGTGCTGCATTAGT...AGACCCAAGCTTTCCTGACACCTTGAGGTTTGGCTGCTTATTTTCAAGTTTATC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000207801.2
ENSMUST00000224596.2
CDS-3UTR GCA 90 bp ATTGATAAACTTGAAAATAAGCAGCCAAACCTCAAGGTGTCAGGAAAGCTTGGGACAGCTGGAAGCGTTTaGTCCTTTCCATTTCTTCCT +
Preference number: 4 (lower is better)
Translates to: IDKLENKQPNLKVSGKLGTAGSV*SFPFLP
Trigger: AGGAAGAAATGGAAAGGAGCAAACGCTTCCAGCTGT...CCCAAGCTTTCCTGACACCTTGAGGTTTGGCTGCTTATTTTCAAGTTTATCAAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000207801.2
ENSMUST00000224596.2
CDS-3UTR GCA 90 bp GAGCATCACGAATCAGGCCAGAATTGCTTCTTTCCCAGAATGAGATCTAACGTGAAACAATCTACACTTTaGAAGGGACAAAATGGGTCA +
Preference number: 4 (lower is better)
Translates to: EHHESGQNCFFPRMRSNVKQSTL*KGQNGS
Trigger: TGACCCATTTTGTCCCTTGCAAAGTGTAGATTGTTT...CACGTTAGATCTCATTCTGGGAAAGAAGCAATTCTGGCCTGATTCGTGATGCTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000207801.2
ENSMUST00000224596.2
CDS-3UTR CCA 90 bp CCAGCATTGATAAACTTGAAAATAAGCAGCCAAACCTCAAGGTGTCAGGAAAGCCAGATGCAGATTGCTTaGAGTAACTCTCACTTACTG +
Preference number: 4 (lower is better)
Translates to: PALINLKISSQTSRCQESQMQIA*SNSHLL
Trigger: CAGTAAGTGAGAGTTACTCCAAGCAATCTGCATCTG...GCTTTCCTGACACCTTGAGGTTTGGCTGCTTATTTTCAAGTTTATCAATGCTGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000207801.2
ENSMUST00000224596.2
CDS-3UTR CCA 90 bp GATAAACTTGAAAATAAGCAGCCAAACCTCAAGGTGTCAGGAAAGCTTGGGTCTAAACTGCACCTTTACTaGGGTGCTTGTAAATCCTTG +
Preference number: 4 (lower is better)
Translates to: DKLENKQPNLKVSGKLGSKLHLY*GACKSL
Trigger: CAAGGATTTACAAGCACCCCAGTAAAGGTGCAGTTT...AGACCCAAGCTTTCCTGACACCTTGAGGTTTGGCTGCTTATTTTCAAGTTTATC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000207801.2
ENSMUST00000224596.2
CDS-3UTR CCA 90 bp CCAGCATTGATAAACTTGAAAATAAGCAGCCAAACCTCAAGGTGTCAGGAAAGCTGTGAAAGAAAGCTGTaGCACCAGAGTAATTGGCTT +
Preference number: 4 (lower is better)
Translates to: PALINLKISSQTSRCQESCERKL*HQSNWL
Trigger: AAGCCAATTACTCTGGTGCCACAGCTTTCTTTCACA...GCTTTCCTGACACCTTGAGGTTTGGCTGCTTATTTTCAAGTTTATCAATGCTGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000207801.2
ENSMUST00000224596.2
CDS-3UTR CCA 90 bp CCAGCATTGATAAACTTGAAAATAAGCAGCCAAACCTCAAGGTGTCAGGAAAGCTATACCCGAGCAAAATaGGTGGGATGTTCACTTGAA +
Preference number: 4 (lower is better)
Translates to: PALINLKISSQTSRCQESYTRAK*VGCSLE
Trigger: TTCAAGTGAACATCCCACCCATTTTGCTCGGGTATA...GCTTTCCTGACACCTTGAGGTTTGGCTGCTTATTTTCAAGTTTATCAATGCTGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000207801.2
ENSMUST00000224596.2
CDS-3UTR CCA 90 bp TGCTTCTTTCCCAGAATGAGATCTAACGTGGACTGCAGTACACAAAGCAGCCAGACAGAATTAATCCTTTaGGCAGTAATAGAGTTCACA +
Preference number: 4 (lower is better)
Translates to: CFFPRMRSNVDCSTQSSQTELIL*AVIEFT
Trigger: TGTGAACTCTATTACTGCCCAAAGGATTAATTCTGT...CTGGCTGCTTTGTGTACTGCAGTCCACGTTAGATCTCATTCTGGGAAAGAAGCA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000224596.2
CDS-3UTR TCA 90 bp ATTGATAAACTTGAAAATAAGCAGCCAAACCTCAAGGTGTCAGGAAAGCTTGGGTCGATTTTCTTCTTTTaGCAGATGCCTGTCCACCAT +
Preference number: 4 (lower is better)
Translates to: IDKLENKQPNLKVSGKLGSIFFF*QMPVHH
Trigger: ATGGTGGACAGGCATCTGTCAAAAGAAGAAAATCGA...CCCAAGCTTTCCTGACACCTTGAGGTTTGGCTGCTTATTTTCAAGTTTATCAAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000207801.2
ENSMUST00000224596.2
CDS-3UTR TCA 90 bp ATTGATAAACTTGAAAATAAGCAGCCAAACCTCAAGGTGTCAGGAAAGCTTGGGTCATTCCAGCATGGATaGGATCCATTTGCAATGTTG +
Preference number: 4 (lower is better)
Translates to: IDKLENKQPNLKVSGKLGSFQHG*DPFAML
Trigger: CAACATTGCAAATGGATCTCATCCATGCTGGAATGA...CCCAAGCTTTCCTGACACCTTGAGGTTTGGCTGCTTATTTTCAAGTTTATCAAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000224596.2
CDS-3UTR CCA 90 bp ATTGATAAACTTGAAAATAAGCAGCCAAACCTCAAGGTGTCAGGAAAGCTTGGGTATTTGGGGATTTCCTaGCCTTTGTGTCTCAAACAC +
Preference number: 4 (lower is better)
Translates to: IDKLENKQPNLKVSGKLGYLGIS*PLCLKH
Trigger: GTGTTTGAGACACAAAGGCCAGGAAATCCCCAAATA...CCCAAGCTTTCCTGACACCTTGAGGTTTGGCTGCTTATTTTCAAGTTTATCAAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000207801.2
ENSMUST00000224596.2
CDS-3UTR CCA 90 bp GATAAACTTGAAAATAAGCAGCCAAACCTCAAGGTGTCAGGAAAGCTTGGGTCTCTGGAAGACTATGTCTaGAATCTCATTGTCATAGAG +
Preference number: 4 (lower is better)
Translates to: DKLENKQPNLKVSGKLGSLEDYV*NLIVIE
Trigger: CTCTATGACAATGAGATTCCAGACATAGTCTTCCAG...AGACCCAAGCTTTCCTGACACCTTGAGGTTTGGCTGCTTATTTTCAAGTTTATC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000207801.2
ENSMUST00000224596.2
CDS-3UTR TCA 90 bp GATAAACTTGAAAATAAGCAGCCAAACCTCAAGGTGTCAGGAAAGCTTGGGTCTGTGACATATGATATCTaGGGTTCAATCGTAGCAAAA +
Preference number: 4 (lower is better)
Translates to: DKLENKQPNLKVSGKLGSVTYDI*GSIVAK
Trigger: TTTTGCTACGATTGAACCTCAGATATCATATGTCAC...AGACCCAAGCTTTCCTGACACCTTGAGGTTTGGCTGCTTATTTTCAAGTTTATC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000207801.2
ENSMUST00000224596.2
CDS-3UTR TCA 90 bp ATTGATAAACTTGAAAATAAGCAGCCAAACCTCAAGGTGTCAGGAAAGCTTGGGGTAATCATGTCCTGGTaGGATAAAATCCACCTTGAT +
Preference number: 4 (lower is better)
Translates to: IDKLENKQPNLKVSGKLGVIMSW*DKIHLD
Trigger: ATCAAGGTGGATTTTATCTCACCAGGACATGATTAC...CCCAAGCTTTCCTGACACCTTGAGGTTTGGCTGCTTATTTTCAAGTTTATCAAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000224596.2
CDS-3UTR GCA 90 bp CCAGCATTGATAAACTTGAAAATAAGCAGCCAAACCTCAAGGTGTCAGGAAAGCCAGAGAAGTATGGCATaGTCTTCTTTATTTCCAATG +
Preference number: 4 (lower is better)
Translates to: PALINLKISSQTSRCQESQRSMA*SSLFPM
Trigger: CATTGGAAATAAAGAAGAGCATGCCATACTTCTCTG...GCTTTCCTGACACCTTGAGGTTTGGCTGCTTATTTTCAAGTTTATCAATGCTGG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000207801.2
ENSMUST00000224596.2
CDS-3UTR CCA 90 bp ATTGATAAACTTGAAAATAAGCAGCCAAACCTCAAGGTGTCAGGAAAGCTTGGGAGTTCACATCTGAAATaGGTATATCCTTCTGTGCCT +
Preference number: 4 (lower is better)
Translates to: IDKLENKQPNLKVSGKLGSSHLK*VYPSVP
Trigger: AGGCACAGAAGGATATACCCATTTCAGATGTGAACT...CCCAAGCTTTCCTGACACCTTGAGGTTTGGCTGCTTATTTTCAAGTTTATCAAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000224596.2
CDS-3UTR GCA 90 bp ATTGATAAACTTGAAAATAAGCAGCCAAACCTCAAGGTGTCAGGAAAGCTTGGGAAGTTAAATTCGTCTTaGAACTGCTCAAGACGGAAA +
Preference number: 4 (lower is better)
Translates to: IDKLENKQPNLKVSGKLGKLNSS*NCSRRK
Trigger: TTTCCGTCTTGAGCAGTTGCAAGACGAATTTAACTT...CCCAAGCTTTCCTGACACCTTGAGGTTTGGCTGCTTATTTTCAAGTTTATCAAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000207801.2
ENSMUST00000224596.2
CDS-3UTR GCA 90 bp ATTGATAAACTTGAAAATAAGCAGCCAAACCTCAAGGTGTCAGGAAAGCTTGGGTGGATGAGATCCATTTaGAATGTTGGTTTGATATAC +
Preference number: 4 (lower is better)
Translates to: IDKLENKQPNLKVSGKLGWMRSI*NVGLIY
Trigger: GTATATCAAACCAACATTGCAAATGGATCTCATCCA...CCCAAGCTTTCCTGACACCTTGAGGTTTGGCTGCTTATTTTCAAGTTTATCAAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000224596.2
CDS-3UTR CCA 90 bp ATTGATAAACTTGAAAATAAGCAGCCAAACCTCAAGGTGTCAGGAAAGCTTGGGCTACCATGCTTTTATTaGTGTCCGAGTAAACTATTT +
Preference number: 4 (lower is better)
Translates to: IDKLENKQPNLKVSGKLGLPCFY*CPSKLF
Trigger: AAATAGTTTACTCGGACACCAATAAAAGCATGGTAG...CCCAAGCTTTCCTGACACCTTGAGGTTTGGCTGCTTATTTTCAAGTTTATCAAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000224596.2
CDS GCA 90 bp TCTCCGCTTCCGTCCCCAGGTCCTTCTGACACTCCCGCTTGGTTCTaGTCATCCCACGTGTTCGTTTTTACCCATGGTGCAGTCCCGAGA +
Preference number: 5 (lower is better)
Translates to: SPLPSPGPSDTPAWF*SSHVFVFTHGAVPR
Trigger: TCTCGGGACTGCACCATGGGTAAAAACGAACACGTGGGATGAGCAGAACCAAGCGGGAGTGTCAGAAGGACCTGGGGACGGAAGCGGAGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000207863.2
CDS-3UTR CAA 90 bp GCAGCCAGACTACCTGAAGAGTCTCCCAGAAGAGGTGTGTTGGTGAGGATGCCAGGCGGGTTCAGGGCCTaGATGTATCTGGTGACTAAG +
Preference number: 5 (lower is better)
Translates to: AARLPEESPRRGVLVRMPGGFRA*MYLVTK
Trigger: CTTAGTCACCAGATACATCAAGGCCCTGAACCCGCC...TGGCATCCTCACCAACACACCTCTTCTGGGAGACTCTTCAGGTAGTCTGGCTGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000207801.2
ENSMUST00000224596.2
CDS GCA 90 bp TCCAGGAACACCTCTTGCGTCAACATTCCTCAGCACACTACAGTATaGAGAGCTCAGCGACTGCGACACGGGTGTCAGGGGGATTCCATT +
Preference number: 5 (lower is better)
Translates to: SRNTSCVNIPQHTTV*RAQRLRHGCQGDSI
Trigger: AATGGAATCCCCCTGACACCCGTGTCGCAGTCGCTGAGCTCTGCATACTGTAGTGTGCTGAGGAATGTTGACGCAAGAGGTGTTCCTGGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000224596.2
CDS GCA 90 bp ATCGGCTGCAGGAGGAAGAGATCTAGCTGGCCTGCATTTCTCAGCTaGAACAGCTGGAAGCGTTTGCTCCTTTCCATTTCTTCCTCGGAC +
Preference number: 5 (lower is better)
Translates to: IGCRRKRSSWPAFLS*NSWKRLLLSISSSD
Trigger: GTCCGAGGAAGAAATGGAAAGGAGCAAACGCTTCCAGCTGTTGCAGCTGAGAAATGCAGGCCAGCTAGATCTCTTCCTCCTGCAGCCGAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000207801.2
ENSMUST00000224596.2
CDS-3UTR CAA 90 bp GAAGAGTCTCCCAGAAGAGGTGTGTTGGTGAGGATGCCATCTAGACGTGTCATCGGCGGGTTCAGGGCCTaGATGTATCTGGTGACTAAG +
Preference number: 5 (lower is better)
Translates to: EESPRRGVLVRMPSRRVIGGFRA*MYLVTK
Trigger: CTTAGTCACCAGATACATCAAGGCCCTGAACCCGCC...GATGACACGTCTAGATGGCATCCTCACCAACACACCTCTTCTGGGAGACTCTTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000207801.2
ENSMUST00000224596.2
CDS-3UTR CAA 90 bp GAAGAGTCTCCCAGAAGAGGTGTGTTGGTGAGGATGCCATCTAGACGTGTCATCGTCCAGGAACACCTCTaGCGTCAACATTCCTCAGCA +
Preference number: 5 (lower is better)
Translates to: EESPRRGVLVRMPSRRVIVQEHL*RQHSSA
Trigger: TGCTGAGGAATGTTGACGCAAGAGGTGTTCCTGGAC...GATGACACGTCTAGATGGCATCCTCACCAACACACCTCTTCTGGGAGACTCTTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000207801.2
ENSMUST00000224596.2
CDS TCA 90 bp AGAGATACGAATCGGGCAATGAGGTCAAGCGTTGCATTCGAGTCATaGAGAAATATATCCAGAAGCTGCTGGGGCGGGTTCAGGGCCTTG +
Preference number: 5 (lower is better)
Translates to: RDTNRAMRSSVAFES*RNISRSCWGGFRAL
Trigger: CAAGGCCCTGAACCCGCCCCAGCAGCTTCTGGATATATTTCTTCATGACTCGAATGCAACGCTTGACCTCATTGCCCGATTCGTATCTCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000207801.2
ENSMUST00000224596.2
CDS TCA 90 bp GGGGGAATTCAGAAGCATGAAGTCCAGTCTGGTACACAGCATCAATaGCTGCCTGGACATCTGTGTAGGGCATCTGGATGGGAAATCCTG +
Preference number: 5 (lower is better)
Translates to: GGIQKHEVQSGTQHQ*LPGHLCRASGWEIL
Trigger: CAGGATTTCCCATCCAGATGCCCTACACAGATGTCCAGGCAGTCATTGATGCTGTGTACCAGACTGGACTTCATGCTTCTGAATTCCCCC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000207801.2
ENSMUST00000224596.2
CDS CCA 90 bp AGGAGGGACGTAGGTGTTACTCCAGGTATACCCGAGCAAAATGGGTaGGATGTTCACTTGAAATGTCCCACTAATCTCAGGCTGCTGCAG +
Preference number: 5 (lower is better)
Translates to: RRDVGVTPGIPEQNG*DVHLKCPTNLRLLQ
Trigger: CTGCAGCAGCCTGAGATTAGTGGGACATTTCAAGTGAACATCCCACCCATTTTGCTCGGGTATACCTGGAGTAACACCTACGTCCCTCCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000224596.2
CDS TCA 90 bp ATGTGGATCAATCCTGGCATCATCTGCCCACTCACAAAGCTTTTGTaGGTTCACGATCCATGGCAGTCCAGGAACACCTCTTGCGTCAAC +
Preference number: 5 (lower is better)
Translates to: MWINPGIICPLTKLL*VHDPWQSRNTSCVN
Trigger: GTTGACGCAAGAGGTGTTCCTGGACTGCCATGGATCGTGAACTCACAAAAGCTTTGTGAGTGGGCAGATGATGCCAGGATTGATCCACAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000207801.2
ENSMUST00000224596.2
CDS GCA 90 bp TGCTGGGGCGGGTTCAGGGCCTTGATGTATCTGGTGACTAAGATGTaGATTCCTTCACCATTAAAAACAGTTGCCACGACTCTTCGGTTG +
Preference number: 5 (lower is better)
Translates to: CWGGFRALMYLVTKM*IPSPLKTVATTLRL
Trigger: CAACCGAAGAGTCGTGGCAACTGTTTTTAATGGTGAAGGAATGCACATCTTAGTCACCAGATACATCAAGGCCCTGAACCCGCCCCAGCA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000207801.2
ENSMUST00000224596.2
CDS-3UTR CAA 90 bp GCAGCCAGACTACCTGAAGAGTCTCCCAGAAGAGGTGTGTTGGTGAGGATGCCACCACTGGAGAACTACTaGGCACAAAAATATTTGCCT +
Preference number: 5 (lower is better)
Translates to: AARLPEESPRRGVLVRMPPLENY*AQKYLP
Trigger: AGGCAAATATTTTTGTGCCAAGTAGTTCTCCAGTGG...TGGCATCCTCACCAACACACCTCTTCTGGGAGACTCTTCAGGTAGTCTGGCTGC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000207801.2
ENSMUST00000224596.2
CDS TCA 90 bp GTGTTACTCCAGGTATACCCGAGCAAAATGGGTGGGATGTTCACTTaGAATGTCCCACTAATCTCAGGCTGCTGCAGAAGGGCTGAGAAA +
Preference number: 5 (lower is better)
Translates to: VLLQVYPSKMGGMFT*NVPLISGCCRRAEK
Trigger: TTTCTCAGCCCTTCTGCAGCAGCCTGAGATTAGTGGGACATTTCAAGTGAACATCCCACCCATTTTGCTCGGGTATACCTGGAGTAACAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000224596.2
CDS GCA 90 bp CCTTCGTCTTCTAAAATTCGAGGGAGCATGCCTTTCGGCAGTTTCTaGTGGCTGGCCACTGGAGAACTACTTGGCACAAAAATATTTGCC +
Preference number: 5 (lower is better)
Translates to: PSSSKIRGSMPFGSF*WLATGELLGTKIFA
Trigger: GGCAAATATTTTTGTGCCAAGTAGTTCTCCAGTGGCCAGCCAGCAGAAACTGCCGAAAGGCATGCTCCCTCGAATTTTAGAAGACGAAGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000207801.2
ENSMUST00000224596.2
CDS GCA 90 bp GAATTCAGAAGCATGAAGTCCAGTCTGGTACACAGCATCAATGACTaGCTGGACATCTGTGTAGGGCATCTGGATGGGAAATCCTGTGAC +
Preference number: 5 (lower is better)
Translates to: EFRSMKSSLVHSIND*LDICVGHLDGKSCD
Trigger: GTCACAGGATTTCCCATCCAGATGCCCTACACAGATGTCCAGGCAGTCATTGATGCTGTGTACCAGACTGGACTTCATGCTTCTGAATTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000207801.2
ENSMUST00000224596.2
CDS CCA 90 bp TCGTCTTCTAAAATTCGAGGGAGCATGCCTTTCGGCAGTTTCTGCTaGCTGGCCACTGGAGAACTACTTGGCACAAAAATATTTGCCTCC +
Preference number: 5 (lower is better)
Translates to: SSSKIRGSMPFGSFC*LATGELLGTKIFAS
Trigger: GGAGGCAAATATTTTTGTGCCAAGTAGTTCTCCAGTGGCCAGCCAGCAGAAACTGCCGAAAGGCATGCTCCCTCGAATTTTAGAAGACGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000207801.2
ENSMUST00000224596.2
CDS-3UTR CAA 90 bp GAAGAGTCTCCCAGAAGAGGTGTGTTGGTGAGGATGCCATCTAGACGTGTCATCTCAAGACGGAAATATTaGGGGATTTCCTGGCCTTTG +
Preference number: 5 (lower is better)
Translates to: EESPRRGVLVRMPSRRVISRRKY*GISWPL
Trigger: CAAAGGCCAGGAAATCCCCAAATATTTCCGTCTTGA...GATGACACGTCTAGATGGCATCCTCACCAACACACCTCTTCTGGGAGACTCTTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000207801.2
ENSMUST00000224596.2
CDS CCA 90 bp CTTCTAAAATTCGAGGGAGCATGCCTTTCGGCAGTTTCTGCTGGCTaGCCACTGGAGAACTACTTGGCACAAAAATATTTGCCTCCTGTT +
Preference number: 5 (lower is better)
Translates to: LLKFEGACLSAVSAG*PLENYLAQKYLPPV
Trigger: AACAGGAGGCAAATATTTTTGTGCCAAGTAGTTCTCCAGTGGCCAGCCAGCAGAAACTGCCGAAAGGCATGCTCCCTCGAATTTTAGAAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000207801.2
ENSMUST00000224596.2
CDS-3UTR CAA 90 bp GACCTCCACAAGTTGAGCATCACGAATCAGGCCAGAATTGCTTCTTTCCCAGAAGGGTGGGATGTTCACTaGAAATGTCCCACTAATCTC +
Preference number: 5 (lower is better)
Translates to: DLHKLSITNQARIASFPEGWDVH*KCPTNL
Trigger: GAGATTAGTGGGACATTTCAAGTGAACATCCCACCC...TTCTGGGAAAGAAGCAATTCTGGCCTGATTCGTGATGCTCAACTTGTGGAGGTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000207801.2
ENSMUST00000224596.2
CDS-3UTR CAA 90 bp TGCTTCTTTCCCAGAATGAGATCTAACGTGGACTGCAGTACACAAAGCAGCCAGAAACTGCTTATGACATaGCCCCGTCGATGGATTCCA +
Preference number: 5 (lower is better)
Translates to: CFFPRMRSNVDCSTQSSQKLLMT*PRRWIP
Trigger: TGGAATCCATCGACGGGGCAATGTCATAAGCAGTTT...CTGGCTGCTTTGTGTACTGCAGTCCACGTTAGATCTCATTCTGGGAAAGAAGCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000207801.2
ENSMUST00000224596.2
CDS-3UTR CAA 90 bp GAAGAGTCTCCCAGAAGAGGTGTGTTGGTGAGGATGCCATCTAGACGTGTCATCTTAAGCTTCTGCATTTaGGCTCTCCTCTTTTGCTCA +
Preference number: 5 (lower is better)
Translates to: EESPRRGVLVRMPSRRVILSFCI*ALLFCS
Trigger: TGAGCAAAAGAGGAGAGCCAAAATGCAGAAGCTTAA...GATGACACGTCTAGATGGCATCCTCACCAACACACCTCTTCTGGGAGACTCTTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000224596.2
CDS-3UTR CAA 90 bp CCTGACCTCCACAAGTTGAGCATCACGAATCAGGCCAGAATTGCTTCTTTCCCACCTTTCAGCTCTGTCTaGTTAGGTAAAGGCAGATAC +
Preference number: 5 (lower is better)
Translates to: PDLHKLSITNQARIASFPPFSSV*LGKGRY
Trigger: GTATCTGCCTTTACCTAACAAGACAGAGCTGAAAGG...TGGGAAAGAAGCAATTCTGGCCTGATTCGTGATGCTCAACTTGTGGAGGTCAGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000224596.2
CDS-3UTR CAA 90 bp CCTGACCTCCACAAGTTGAGCATCACGAATCAGGCCAGAATTGCTTCTTTCCCATTCGATTTTCTTCTTTaGACAGATGCCTGTCCACCA +
Preference number: 5 (lower is better)
Translates to: PDLHKLSITNQARIASFPFDFLL*TDACPP
Trigger: TGGTGGACAGGCATCTGTCAAAAGAAGAAAATCGAA...TGGGAAAGAAGCAATTCTGGCCTGATTCGTGATGCTCAACTTGTGGAGGTCAGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000207801.2
ENSMUST00000224596.2
CDS-3UTR CAA 90 bp GATAAACTTGAAAATAAGCAGCCAAACCTCAAGGTGTCAGGAAAGCTTGGGTCTGTCCAGGAACACCTCTaGCGTCAACATTCCTCAGCA +
Preference number: 5 (lower is better)
Translates to: DKLENKQPNLKVSGKLGSVQEHL*RQHSSA
Trigger: TGCTGAGGAATGTTGACGCAAGAGGTGTTCCTGGAC...AGACCCAAGCTTTCCTGACACCTTGAGGTTTGGCTGCTTATTTTCAAGTTTATC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000207801.2
ENSMUST00000224596.2
CDS-3UTR CAA 90 bp CTTGAAAATAAGCAGCCAAACCTCAAGGTGTCAGGAAAGCTTGGGTCTAGGAGAGGGTGGGATGTTCACTaGAAATGTCCCACTAATCTC +
Preference number: 5 (lower is better)
Translates to: LENKQPNLKVSGKLGSRRGWDVH*KCPTNL
Trigger: GAGATTAGTGGGACATTTCAAGTGAACATCCCACCC...TCTCCTAGACCCAAGCTTTCCTGACACCTTGAGGTTTGGCTGCTTATTTTCAAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000207801.2
ENSMUST00000224596.2
CDS-3UTR CAA 90 bp CCAGCATTGATAAACTTGAAAATAAGCAGCCAAACCTCAAGGTGTCAGGAAAGCAGGAAGGTACATTCTTaGGGGTTCTGCCCACTGCAG +
Preference number: 5 (lower is better)
Translates to: PALINLKISSQTSRCQESRKVHS*GFCPLQ
Trigger: CTGCAGTGGGCAGAACCCCAAAGAATGTACCTTCCT...GCTTTCCTGACACCTTGAGGTTTGGCTGCTTATTTTCAAGTTTATCAATGCTGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000207801.2
ENSMUST00000224596.2
CDS-3UTR CAA 90 bp GATAAACTTGAAAATAAGCAGCCAAACCTCAAGGTGTCAGGAAAGCTTGGGTCTAGGAAGGTACATTCTTaGGGGTTCTGCCCACTGCAG +
Preference number: 5 (lower is better)
Translates to: DKLENKQPNLKVSGKLGSRKVHS*GFCPLQ
Trigger: CTGCAGTGGGCAGAACCCCAAAGAATGTACCTTCCT...AGACCCAAGCTTTCCTGACACCTTGAGGTTTGGCTGCTTATTTTCAAGTTTATC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000207801.2
ENSMUST00000224596.2
CDS-3UTR CAA 90 bp CTTGAAAATAAGCAGCCAAACCTCAAGGTGTCAGGAAAGCTTGGGTCTAGGAGATATTCCAGGACAGTCTaGCCTTTCAGCTCTGTCTTG +
Preference number: 5 (lower is better)
Translates to: LENKQPNLKVSGKLGSRRYSRTV*PFSSVL
Trigger: CAAGACAGAGCTGAAAGGCAAGACTGTCCTGGAATA...TCTCCTAGACCCAAGCTTTCCTGACACCTTGAGGTTTGGCTGCTTATTTTCAAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000224596.2
CDS-3UTR CAA 90 bp TGCTTCTTTCCCAGAATGAGATCTAACGTGGACTGCAGTACACAAAGCAGCCAGTTCGATTTTCTTCTTTaGACAGATGCCTGTCCACCA +
Preference number: 5 (lower is better)
Translates to: CFFPRMRSNVDCSTQSSQFDFLL*TDACPP
Trigger: TGGTGGACAGGCATCTGTCAAAAGAAGAAAATCGAA...CTGGCTGCTTTGTGTACTGCAGTCCACGTTAGATCTCATTCTGGGAAAGAAGCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000207801.2
ENSMUST00000224596.2
CDS-3UTR CAA 90 bp GACCTCCACAAGTTGAGCATCACGAATCAGGCCAGAATTGCTTCTTTCCCAGAAGGGATTTCCTGGCCTTaGTGTCTCAAACACATAATA +
Preference number: 5 (lower is better)
Translates to: DLHKLSITNQARIASFPEGISWP*CLKHII
Trigger: TATTATGTGTTTGAGACACAAAGGCCAGGAAATCCC...TTCTGGGAAAGAAGCAATTCTGGCCTGATTCGTGATGCTCAACTTGTGGAGGTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000207801.2
ENSMUST00000224596.2
CDS-3UTR CAA 90 bp CCTGACCTCCACAAGTTGAGCATCACGAATCAGGCCAGAATTGCTTCTTTCCCAAAAGTTAAATTCGTCTaGCAACTGCTCAAGACGGAA +
Preference number: 5 (lower is better)
Translates to: PDLHKLSITNQARIASFPKVKFV*QLLKTE
Trigger: TTCCGTCTTGAGCAGTTGCAAGACGAATTTAACTTT...TGGGAAAGAAGCAATTCTGGCCTGATTCGTGATGCTCAACTTGTGGAGGTCAGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000207801.2
ENSMUST00000224596.2
CDS-3UTR CAA 90 bp GACCTCCACAAGTTGAGCATCACGAATCAGGCCAGAATTGCTTCTTTCCCAGAATCCAGAAGCTCTCTTTaGAGTAGTCAAACTGTACAG +
Preference number: 5 (lower is better)
Translates to: DLHKLSITNQARIASFPESRSSL*SSQTVQ
Trigger: CTGTACAGTTTGACTACTCAAAAGAGAGCTTCTGGA...TTCTGGGAAAGAAGCAATTCTGGCCTGATTCGTGATGCTCAACTTGTGGAGGTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000207801.2
ENSMUST00000224596.2
CDS-3UTR CAA 90 bp CCAGCATTGATAAACTTGAAAATAAGCAGCCAAACCTCAAGGTGTCAGGAAAGCTCCCCTGGACGTTTTTaGGAAGCAGCTGTTTCCAGA +
Preference number: 5 (lower is better)
Translates to: PALINLKISSQTSRCQESSPGRF*EAAVSR
Trigger: TCTGGAAACAGCTGCTTCCAAAAAACGTCCAGGGGA...GCTTTCCTGACACCTTGAGGTTTGGCTGCTTATTTTCAAGTTTATCAATGCTGG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENSMUST00000207801.2
ENSMUST00000224596.2
CDS CCA 90 bp AGGAGGGACGTAGGTGTTACTCCAGGTATACCCGAGCAAAATGGGTaGGATGTTCACTTGAAATGTCCCACTAATCTCATGTTTTTCAAT +
Preference number: 5 (lower is better)
Translates to: RRDVGVTPGIPEQNG*DVHLKCPTNLMFFN
Trigger: ATTGAAAAACATGAGATTAGTGGGACATTTCAAGTGAACATCCCACCCATTTTGCTCGGGTATACCTGGAGTAACACCTACGTCCCTCCT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000207801.2
CDS-3UTR CAA 90 bp TGCTTCTTTCCCAGAATGAGATCTAACGTGGACTGCAGTACACAAAGCAGCCAGAGTTTTTCTCTTACTTaGCCTCTCAGTGTCTCTGTT +
Preference number: 5 (lower is better)
Translates to: CFFPRMRSNVDCSTQSSQSFSLT*PLSVSV
Trigger: AACAGAGACACTGAGAGGCAAAGTAAGAGAAAAACT...CTGGCTGCTTTGTGTACTGCAGTCCACGTTAGATCTCATTCTGGGAAAGAAGCA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000207801.2
ENSMUST00000224596.2
CDS-3UTR CAA 90 bp ATTGATAAACTTGAAAATAAGCAGCCAAACCTCAAGGTGTCAGGAAAGCTTGGGTCCCCTGGACGTTTTTaGGAAGCAGCTGTTTCCAGA +
Preference number: 5 (lower is better)
Translates to: IDKLENKQPNLKVSGKLGSPGRF*EAAVSR
Trigger: TCTGGAAACAGCTGCTTCCAAAAAACGTCCAGGGGA...CCCAAGCTTTCCTGACACCTTGAGGTTTGGCTGCTTATTTTCAAGTTTATCAAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENSMUST00000207801.2
ENSMUST00000224596.2
CDS TCA 90 bp GTGTTACTCCAGGTATACCCGAGCAAAATGGGTGGGATGTTCACTTaGAATGTCCCACTAATCTCATGTTTTTCAATCACCACTTCATCG +
Preference number: 5 (lower is better)
Translates to: VLLQVYPSKMGGMFT*NVPLISCFSITTSS
Trigger: CGATGAAGTGGTGATTGAAAAACATGAGATTAGTGGGACATTTCAAGTGAACATCCCACCCATTTTGCTCGGGTATACCTGGAGTAACAC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000207801.2
CDS TCA 90 bp AAACAATCTACACTTTGCAAGGGACAAAATGGGTCAAACTGCTTATaGCATTGCCCCGTCGATGGATTCCAAAGCAAACACTCGTCAGTT +
Preference number: 5 (lower is better)
Translates to: KQSTLCKGQNGSNCL*HCPVDGFQSKHSSV
Trigger: AACTGACGAGTGTTTGCTTTGGAATCCATCGACGGGGCAATGTCATAAGCAGTTTGACCCATTTTGTCCCTTGCAAAGTGTAGATTGTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000207801.2
ENSMUST00000224596.2
CDS GCA 90 bp CTTTCCATTTCTTCCTCGGACACAAAGTTAAATTCGTCTTGCAACTaGTCAAGACGGAAATATTTGGGGATTTCCTGGCCTTTGTGTCTC +
Preference number: 5 (lower is better)
Translates to: LSISSSDTKLNSSCN*SRRKYLGISWPLCL
Trigger: GAGACACAAAGGCCAGGAAATCCCCAAATATTTCCGTCTTGAGCAGTTGCAAGACGAATTTAACTTTGTGTCCGAGGAAGAAATGGAAAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000207801.2
ENSMUST00000224596.2
CDS GCA 90 bp TTGCTCCTTTCCATTTCTTCCTCGGACACAAAGTTAAATTCGTCTTaGAACTGCTCAAGACGGAAATATTTGGGGATTTCCTGGCCTTTG +
Preference number: 5 (lower is better)
Translates to: LLLSISSSDTKLNSS*NCSRRKYLGISWPL
Trigger: CAAAGGCCAGGAAATCCCCAAATATTTCCGTCTTGAGCAGTTGCAAGACGAATTTAACTTTGTGTCCGAGGAAGAAATGGAAAGGAGCAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000207801.2
ENSMUST00000224596.2
CDS-3UTR CAA 90 bp CCAGCATTGATAAACTTGAAAATAAGCAGCCAAACCTCAAGGTGTCAGGAAAGCTCAAGACGGAAATATTaGGGGATTTCCTGGCCTTTG +
Preference number: 5 (lower is better)
Translates to: PALINLKISSQTSRCQESSRRKY*GISWPL
Trigger: CAAAGGCCAGGAAATCCCCAAATATTTCCGTCTTGA...GCTTTCCTGACACCTTGAGGTTTGGCTGCTTATTTTCAAGTTTATCAATGCTGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000207801.2
ENSMUST00000224596.2
CDS-3UTR CAA 90 bp CCAGCATTGATAAACTTGAAAATAAGCAGCCAAACCTCAAGGTGTCAGGAAAGCGGGATTTCCTGGCCTTaGTGTCTCAAACACATAATA +
Preference number: 5 (lower is better)
Translates to: PALINLKISSQTSRCQESGISWP*CLKHII
Trigger: TATTATGTGTTTGAGACACAAAGGCCAGGAAATCCC...GCTTTCCTGACACCTTGAGGTTTGGCTGCTTATTTTCAAGTTTATCAATGCTGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000207801.2
ENSMUST00000224596.2
CDS GCA 90 bp GCCTTCTTCCCGAAGTACAGAAAGAAATTACAGAGAAGTATGGCATaGTCTTCTTTATTTCCAATGGCCAAACTAATGCAGCACTCTGAT +
Preference number: 5 (lower is better)
Translates to: AFFPKYRKKLQRSMA*SSLFPMAKLMQHSD
Trigger: ATCAGAGTGCTGCATTAGTTTGGCCATTGGAAATAAAGAAGAGCATGCCATACTTCTCTGTAATTTCTTTCTGTACTTCGGGAAGAAGGC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000207801.2
ENSMUST00000224596.2
CDS CCA 90 bp TTTGTGTCTCAAACACATAATATGTTCTGTTATATCCGAGTAGTCTaGGTTATGTGGATCAATCCTGGCATCATCTGCCCACTCACAAAG +
Preference number: 5 (lower is better)
Translates to: FVSQTHNMFCYIRVV*VMWINPGIICPLTK
Trigger: CTTTGTGAGTGGGCAGATGATGCCAGGATTGATCCACATAACCCAGACTACTCGGATATAACAGAACATATTATGTGTTTGAGACACAAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000207801.2
ENSMUST00000224596.2
CDS-3UTR CAA 90 bp GATAAACTTGAAAATAAGCAGCCAAACCTCAAGGTGTCAGGAAAGCTTGGGTCTAGTTTTTCTCTTACTTaGCCTCTCAGTGTCTCTGTT +
Preference number: 5 (lower is better)
Translates to: DKLENKQPNLKVSGKLGSSFSLT*PLSVSV
Trigger: AACAGAGACACTGAGAGGCAAAGTAAGAGAAAAACT...AGACCCAAGCTTTCCTGACACCTTGAGGTTTGGCTGCTTATTTTCAAGTTTATC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000207801.2
ENSMUST00000224596.2
CDS-3UTR CAA 90 bp CCAGCATTGATAAACTTGAAAATAAGCAGCCAAACCTCAAGGTGTCAGGAAAGCTGTAAATCCTTGCTTTaGCCGGAGAGATTTTATCTG +
Preference number: 5 (lower is better)
Translates to: PALINLKISSQTSRCQESCKSLL*PERFYL
Trigger: CAGATAAAATCTCTCCGGCAAAAGCAAGGATTTACA...GCTTTCCTGACACCTTGAGGTTTGGCTGCTTATTTTCAAGTTTATCAATGCTGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000207801.2
ENSMUST00000224596.2
CDS-3UTR CAA 90 bp CCAGCATTGATAAACTTGAAAATAAGCAGCCAAACCTCAAGGTGTCAGGAAAGCAAAGTTAAATTCGTCTaGCAACTGCTCAAGACGGAA +
Preference number: 5 (lower is better)
Translates to: PALINLKISSQTSRCQESKVKFV*QLLKTE
Trigger: TTCCGTCTTGAGCAGTTGCAAGACGAATTTAACTTT...GCTTTCCTGACACCTTGAGGTTTGGCTGCTTATTTTCAAGTTTATCAATGCTGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000207801.2
ENSMUST00000224596.2
CDS-3UTR CAA 90 bp GATAAACTTGAAAATAAGCAGCCAAACCTCAAGGTGTCAGGAAAGCTTGGGTCTTCATCCTCACTTTCCTaGAGATTAAAAGGCACATTG +
Preference number: 5 (lower is better)
Translates to: DKLENKQPNLKVSGKLGSSSSLS*RLKGTL
Trigger: CAATGTGCCTTTTAATCTCAAGGAAAGTGAGGATGA...AGACCCAAGCTTTCCTGACACCTTGAGGTTTGGCTGCTTATTTTCAAGTTTATC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000224596.2
CDS-3UTR CAA 90 bp CCAGCATTGATAAACTTGAAAATAAGCAGCCAAACCTCAAGGTGTCAGGAAAGCGACAGAATTAATCCTTaGGGCAGTAATAGAGTTCAC +
Preference number: 5 (lower is better)
Translates to: PALINLKISSQTSRCQESDRINP*GSNRVH
Trigger: GTGAACTCTATTACTGCCCAAAGGATTAATTCTGTC...GCTTTCCTGACACCTTGAGGTTTGGCTGCTTATTTTCAAGTTTATCAATGCTGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000224596.2
CDS-3UTR CAA 90 bp ATTGATAAACTTGAAAATAAGCAGCCAAACCTCAAGGTGTCAGGAAAGCTTGGGTGTAAATCCTTGCTTTaGCCGGAGAGATTTTATCTG +
Preference number: 5 (lower is better)
Translates to: IDKLENKQPNLKVSGKLGCKSLL*PERFYL
Trigger: CAGATAAAATCTCTCCGGCAAAAGCAAGGATTTACA...CCCAAGCTTTCCTGACACCTTGAGGTTTGGCTGCTTATTTTCAAGTTTATCAAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000207801.2
ENSMUST00000224596.2
CDS TCA 90 bp AAAATTGACAGAATTAATCCTTTGGGCAGTAATAGAGTTCACATCTaGAATGGGTATATCCTTCTGTGCCTGACTTTCATACTCCTGGAA +
Preference number: 5 (lower is better)
Translates to: KIDRINPLGSNRVHI*NGYILLCLTFILLE
Trigger: TTCCAGGAGTATGAAAGTCAGGCACAGAAGGATATACCCATTTCAGATGTGAACTCTATTACTGCCCAAAGGATTAATTCTGTCAATTTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000224596.2
CDS TCA 90 bp TTGCAATGTTGGTTTGATATACAGTGTGTTGAAAGGAAACTTCTATaGAAGGGTGCACAGTATCCTGAAATACAGAGTAAACACTATAAG +
Preference number: 5 (lower is better)
Translates to: LQCWFDIQCVERKLL*KGAQYPEIQSKHYK
Trigger: CTTATAGTGTTTACTCTGTATTTCAGGATACTGTGCACCCTTTCATAGAAGTTTCCTTTCAACACACTGTATATCAAACCAACATTGCAA
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000224596.2
CDS CCA 90 bp ATCAACCTTCTCACCTTTTTCAGAAAATTGACAGAATTAATCCTTTaGGCAGTAATAGAGTTCACATCTGAAATGGGTATATCCTTCTGT +
Preference number: 5 (lower is better)
Translates to: INLLTFFRKLTELIL*AVIEFTSEMGISFC
Trigger: ACAGAAGGATATACCCATTTCAGATGTGAACTCTATTACTGCCCAAAGGATTAATTCTGTCAATTTTCTGAAAAAGGTGAGAAGGTTGAT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000224596.2
CDS TCA 72 bp CAGAGCCGGAGCAGCCTGGCACACAGGACGTGTTCCTaGCTGAAGAGCGGGTGGTGGCTGAACTGCAAGCCC +
Preference number: 6 (lower is better)
Translates to: QSRSSLAHRTCS*LKSGWWLNCKP
Trigger: GGGCTTGCAGTTCAGCCACCACCCGCTCTTCAGTCAGGAACACGTCCTGTGTGCCAGGCTGCTCCGGCTCTG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000207801.2
ENSMUST00000224596.2
CDS TCA 72 bp GCTGGATGGGAGAGAGTCTCCTCTGTGTCTTCATTCTaGAGTGGCGTTTCTCCGCTTCCGTCCCCAGGTCCT +
Preference number: 6 (lower is better)
Translates to: AGWERVSSVSSF*SGVSPLPSPGP
Trigger: AGGACCTGGGGACGGAAGCGGAGAAACGCCACTTCAGAATGAAGACACAGAGGAGACTCTCTCCCATCCAGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000207801.2
ENSMUST00000224596.2
CDS GCA 72 bp CCGTCCCCAGGTCCTTCTGACACTCCCGCTTGGTTCTaGTCATCCCACGTGTTCGTTTTTACCCATGGTGCA +
Preference number: 6 (lower is better)
Translates to: PSPGPSDTPAWF*SSHVFVFTHGA
Trigger: TGCACCATGGGTAAAAACGAACACGTGGGATGAGCAGAACCAAGCGGGAGTGTCAGAAGGACCTGGGGACGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000207863.2
CDS CCA 72 bp CCGCTTCCGTCCCCAGGTCCTTCTGACACTCCCGCTTaGTTCTGCTCATCCCACGTGTTCGTTTTTACCCTA +
Preference number: 6 (lower is better)
Translates to: PLPSPGPSDTPA*FCSSHVFVFTL
Trigger: TAGGGTAAAAACGAACACGTGGGATGAGCAGAACCAAGCGGGAGTGTCAGAAGGACCTGGGGACGGAAGCGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000207801.2
ENSMUST00000224596.2
CDS CCA 72 bp CCGCTTCCGTCCCCAGGTCCTTCTGACACTCCCGCTTaGTTCTGCTCATCCCACGTGTTCGTTTTTACCCAT +
Preference number: 6 (lower is better)
Translates to: PLPSPGPSDTPA*FCSSHVFVFTH
Trigger: ATGGGTAAAAACGAACACGTGGGATGAGCAGAACCAAGCGGGAGTGTCAGAAGGACCTGGGGACGGAAGCGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000207863.2
CDS GCA 72 bp CGTAGAGCCCTTCGTCTTCTAAAATTCGAGGGAGCATaGCTTTCGGCAGTTTCTGCTGGCTGGCCACTGGAG +
Preference number: 6 (lower is better)
Translates to: RRALRLLKFEGA*LSAVSAGWPLE
Trigger: CTCCAGTGGCCAGCCAGCAGAAACTGCCGAAAGGCATGCTCCCTCGAATTTTAGAAGACGAAGGGCTCTACG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000207801.2
ENSMUST00000224596.2
CDS TCA 72 bp AAATGTCCCACTAATCTCAGGCTGCTGCAGAAGGGCTaGGAAAGGGAAGCTGATGGAGCCCAGCCAGTTCTT +
Preference number: 6 (lower is better)
Translates to: KCPTNLRLLQKG*EREADGAQPVL
Trigger: AAGAACTGGCTGGGCTCCATCAGCTTCCCTTTCTCAGCCCTTCTGCAGCAGCCTGAGATTAGTGGGACATTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000224596.2
CDS TCA 72 bp CAGAAGCATGAAGTCCAGTCTGGTACACAGCATCAATaGCTGCCTGGACATCTGTGTAGGGCATCTGGATGG +
Preference number: 6 (lower is better)
Translates to: QKHEVQSGTQHQ*LPGHLCRASGW
Trigger: CCATCCAGATGCCCTACACAGATGTCCAGGCAGTCATTGATGCTGTGTACCAGACTGGACTTCATGCTTCTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000207801.2
ENSMUST00000224596.2
CDS CAA 72 bp GTGAGTTCACGATCCATGGCAGTCCAGGAACACCTCTaGCGTCAACATTCCTCAGCACACTACAGTATGCAG +
Preference number: 6 (lower is better)
Translates to: VSSRSMAVQEHL*RQHSSAHYSMQ
Trigger: CTGCATACTGTAGTGTGCTGAGGAATGTTGACGCAAGAGGTGTTCCTGGACTGCCATGGATCGTGAACTCAC
51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000224596.2
CDS CAA 90 bp AAAGCTTTTGTGAGTTCACGATCCATGGCAGTCCAGGAACACCTCTaGCGTCAACATTCCTCAGCACACTACAGTATGCAGAGCTCAGCG +
Preference number: 6 (lower is better)
Translates to: KAFVSSRSMAVQEHL*RQHSSAHYSMQSSA
Trigger: CGCTGAGCTCTGCATACTGTAGTGTGCTGAGGAATGTTGACGCAAGAGGTGTTCCTGGACTGCCATGGATCGTGAACTCACAAAAGCTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000224596.2
CDS TCA 72 bp CCCACGATGTTAAGGTCTAGTTGGTACATTTCCCTCTaGCCATCCATCCTGTCTCTAAAACAGCACCCCACG +
Preference number: 6 (lower is better)
Translates to: PTMLRSSWYISL*PSILSLKQHPT
Trigger: CGTGGGGTGCTGTTTTAGAGACAGGATGGATGGTCAGAGGGAAATGTACCAACTAGACCTTAACATCGTGGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000207801.2
ENSMUST00000224596.2
CDS TCA 72 bp AATCCTGGCATCATCTGCCCACTCACAAAGCTTTTGTaGGTTCACGATCCATGGCAGTCCAGGAACACCTCT +
Preference number: 6 (lower is better)
Translates to: NPGIICPLTKLL*VHDPWQSRNTS
Trigger: AGAGGTGTTCCTGGACTGCCATGGATCGTGAACTCACAAAAGCTTTGTGAGTGGGCAGATGATGCCAGGATT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000207801.2
ENSMUST00000224596.2
CDS TCA 72 bp AATCGGGCAATGAGGTCAAGCGTTGCATTCGAGTCATaGAGAAATATATCCAGAAGCTGCTGGGGCGGGTTC +
Preference number: 6 (lower is better)
Translates to: NRAMRSSVAFES*RNISRSCWGGF
Trigger: GAACCCGCCCCAGCAGCTTCTGGATATATTTCTTCATGACTCGAATGCAACGCTTGACCTCATTGCCCGATT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000207801.2
ENSMUST00000224596.2
CDS TCA 72 bp CAGGTATACCCGAGCAAAATGGGTGGGATGTTCACTTaGAATGTCCCACTAATCTCAGGCTGCTGCAGAAGG +
Preference number: 6 (lower is better)
Translates to: QVYPSKMGGMFT*NVPLISGCCRR
Trigger: CCTTCTGCAGCAGCCTGAGATTAGTGGGACATTTCAAGTGAACATCCCACCCATTTTGCTCGGGTATACCTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000224596.2
CDS GCA 72 bp TCTAAAATTCGAGGGAGCATGCCTTTCGGCAGTTTCTaGTGGCTGGCCACTGGAGAACTACTTGGCACAAAA +
Preference number: 6 (lower is better)
Translates to: SKIRGSMPFGSF*WLATGELLGTK
Trigger: TTTTGTGCCAAGTAGTTCTCCAGTGGCCAGCCAGCAGAAACTGCCGAAAGGCATGCTCCCTCGAATTTTAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000207801.2
ENSMUST00000224596.2
CDS GCA 72 bp AGGAGGAAGAGATCTAGCTGGCCTGCATTTCTCAGCTaGAACAGCTGGAAGCGTTTGCTCCTTTCCATTTCT +
Preference number: 6 (lower is better)
Translates to: RRKRSSWPAFLS*NSWKRLLLSIS
Trigger: AGAAATGGAAAGGAGCAAACGCTTCCAGCTGTTGCAGCTGAGAAATGCAGGCCAGCTAGATCTCTTCCTCCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000207801.2
ENSMUST00000224596.2
CDS CCA 72 bp TTCGAGGGAGCATGCCTTTCGGCAGTTTCTGCTGGCTaGCCACTGGAGAACTACTTGGCACAAAAATATTTG +
Preference number: 6 (lower is better)
Translates to: FEGACLSAVSAG*PLENYLAQKYL
Trigger: CAAATATTTTTGTGCCAAGTAGTTCTCCAGTGGCCAGCCAGCAGAAACTGCCGAAAGGCATGCTCCCTCGAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000207801.2
ENSMUST00000224596.2
CDS TCA 72 bp GAAGCTGATGGAGCCCAGCCAGTTCTTTTGTATGTATaGGTGAGCACTGCAGCTCTTGAGACAATGATCCTC +
Preference number: 6 (lower is better)
Translates to: EADGAQPVLLYV*VSTAALETMIL
Trigger: GAGGATCATTGTCTCAAGAGCTGCAGTGCTCACTCATACATACAAAAGAACTGGCTGGGCTCCATCAGCTTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000224596.2
CDS GCA 72 bp GCCTTTCCAAGTCACTGTCTTCAAACGAAGCAAAACTaGCCGGGTAAAACTCTAGCTTCGGAAGGATTTGCC +
Preference number: 6 (lower is better)
Translates to: AFPSHCLQTKQN*PGKTLASEGFA
Trigger: GGCAAATCCTTCCGAAGCTAGAGTTTTACCCGGGCAGTTTTGCTTCGTTTGAAGACAGTGACTTGGAAAGGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000224596.2
CDS CAA 72 bp TGGCCTGCATTTCTCAGCTGCAACAGCTGGAAGCGTTaGCTCCTTTCCATTTCTTCCTCGGACACAAAGTTA +
Preference number: 6 (lower is better)
Translates to: WPAFLSCNSWKR*LLSISSSDTKL
Trigger: TAACTTTGTGTCCGAGGAAGAAATGGAAAGGAGCAAACGCTTCCAGCTGTTGCAGCTGAGAAATGCAGGCCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000207801.2
ENSMUST00000224596.2
CDS CAA 72 bp AATATATCCAGAAGCTGCTGGGGCGGGTTCAGGGCCTaGATGTATCTGGTGACTAAGATGTGCATTCCTTCA +
Preference number: 6 (lower is better)
Translates to: NISRSCWGGFRA*MYLVTKMCIPS
Trigger: TGAAGGAATGCACATCTTAGTCACCAGATACATCAAGGCCCTGAACCCGCCCCAGCAGCTTCTGGATATATT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000207801.2
ENSMUST00000224596.2
CDS CAA 90 bp AGATCTAGCTGGCCTGCATTTCTCAGCTGCAACAGCTGGAAGCGTTaGCTCCTTTCCATTTCTTCCTCGGACACAAAGTTAAATTCGTCT +
Preference number: 6 (lower is better)
Translates to: RSSWPAFLSCNSWKR*LLSISSSDTKLNSS
Trigger: AGACGAATTTAACTTTGTGTCCGAGGAAGAAATGGAAAGGAGCAAACGCTTCCAGCTGTTGCAGCTGAGAAATGCAGGCCAGCTAGATCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000207801.2
ENSMUST00000224596.2
CDS TCA 72 bp CGGCCGCAAAAGGAATCAGAGATACGAATCGGGCAATaGGGTCAAGCGTTGCATTCGAGTCATGAAGAAATA +
Preference number: 6 (lower is better)
Translates to: RPQKESEIRIGQ*GQALHSSHEEI
Trigger: TATTTCTTCATGACTCGAATGCAACGCTTGACCTCATTGCCCGATTCGTATCTCTGATTCCTTTTGCGGCCG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000207801.2
ENSMUST00000224596.2
CDS CCA 72 bp CAGTGTTTCGGAAACCACCACCAGATGCAGATTGCTTaGAGTAACTCTCACTTACTGTTTTCTGCTGCGAAG +
Preference number: 6 (lower is better)
Translates to: QCFGNHHQMQIA*SNSHLLFSAAK
Trigger: CTTCGCAGCAGAAAACAGTAAGTGAGAGTTACTCCAAGCAATCTGCATCTGGTGGTGGTTTCCGAAACACTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000207801.2
ENSMUST00000224596.2
CDS CCA 72 bp TTTCATGATCAACCTTCTCACCTGGAAGACTATGTCTaGAATCTCATTGTCATAGAGGGGCATCGGCTGCAG +
Preference number: 6 (lower is better)
Translates to: FHDQPSHLEDYV*NLIVIEGHRLQ
Trigger: CTGCAGCCGATGCCCCTCTATGACAATGAGATTCCAGACATAGTCTTCCAGGTGAGAAGGTTGATCATGAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000207801.2
CDS CCA 72 bp GTAGGTGTTACTCCAGGTATACCCGAGCAAAATGGGTaGGATGTTCACTTGAAATGTCCCACTAATCTCAGG +
Preference number: 6 (lower is better)
Translates to: VGVTPGIPEQNG*DVHLKCPTNLR
Trigger: CCTGAGATTAGTGGGACATTTCAAGTGAACATCCCACCCATTTTGCTCGGGTATACCTGGAGTAACACCTAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000224596.2
CDS CAA 72 bp CTCAGCAGTGTTTCGGAAACCACCACCAGATGCAGATaGCTTGGAGTAACTCTCACTTACTGTTTTCTGCTG +
Preference number: 6 (lower is better)
Translates to: LSSVSETTTRCR*LGVTLTYCFLL
Trigger: CAGCAGAAAACAGTAAGTGAGAGTTACTCCAAGCAATCTGCATCTGGTGGTGGTTTCCGAAACACTGCTGAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000207801.2
ENSMUST00000224596.2
CDS CAA 72 bp TTGCAAGGGACAAAATGGGTCAAACTGCTTATGACATaGCCCCGTCGATGGATTCCAAAGCAAACACTCGTC +
Preference number: 6 (lower is better)
Translates to: LQGTKWVKLLMT*PRRWIPKQTLV
Trigger: GACGAGTGTTTGCTTTGGAATCCATCGACGGGGCAATGTCATAAGCAGTTTGACCCATTTTGTCCCTTGCAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000207801.2
ENSMUST00000224596.2
CDS CAA 90 bp CCAGGAACACCTCTTGCGTCAACATTCCTCAGCACAAATGAACACTaGGATAAGTTTGTCAATTCTGCTGTGAAAGAAAGCTGTGGCACC +
Preference number: 6 (lower is better)
Translates to: PGTPLASTFLSTNEH*DKFVNSAVKESCGT
Trigger: GGTGCCACAGCTTTCTTTCACAGCAGAATTGACAAACTTATCCAAGTGTTCATTTGTGCTGAGGAATGTTGACGCAAGAGGTGTTCCTGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000207801.2
CDS CAA 90 bp ATGTGCATTCCTTCACCATTAAAAACAGTTGCCACGACTCTTCGGTaGGGAAACATGGCCTTACAGTTCCTGGTAAAAGTCTGTGCTCGT +
Preference number: 6 (lower is better)
Translates to: MCIPSPLKTVATTLR*GNMALQFLVKVCAR
Trigger: ACGAGCACAGACTTTTACCAGGAACTGTAAGGCCATGTTTCCCAACCGAAGAGTCGTGGCAACTGTTTTTAATGGTGAAGGAATGCACAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000207801.2
ENSMUST00000224596.2
CDS TCA 72 bp TGGTTCTGCTCATCCCACGTGTTCGTTTTTACCCTATaGAACTGCACCTTTACTGGGGTGCTTGTAAATCCT +
Preference number: 6 (lower is better)
Translates to: WFCSSHVFVFTL*NCTFTGVLVNP
Trigger: AGGATTTACAAGCACCCCAGTAAAGGTGCAGTTTCATAGGGTAAAAACGAACACGTGGGATGAGCAGAACCA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000207801.2
ENSMUST00000224596.2
CDS TCA 72 bp ACACTTTGCAAGGGACAAAATGGGTCAAACTGCTTATaGCATTGCCCCGTCGATGGATTCCAAAGCAAACAC +
Preference number: 6 (lower is better)
Translates to: TLCKGQNGSNCL*HCPVDGFQSKH
Trigger: GTGTTTGCTTTGGAATCCATCGACGGGGCAATGTCATAAGCAGTTTGACCCATTTTGTCCCTTGCAAAGTGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000207801.2
ENSMUST00000224596.2
CDS GCA 72 bp GGGTTCAGGGCCTTGATGTATCTGGTGACTAAGATGTaGATTCCTTCACCATTAAAAACAGTTGCCACGACT +
Preference number: 6 (lower is better)
Translates to: GFRALMYLVTKM*IPSPLKTVATT
Trigger: AGTCGTGGCAACTGTTTTTAATGGTGAAGGAATGCACATCTTAGTCACCAGATACATCAAGGCCCTGAACCC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000207801.2
ENSMUST00000224596.2
CDS CCA 72 bp CGTGTTCGTTTTTACCCTATGAAACTGCACCTTTACTaGGGTGCTTGTAAATCCTTGCTTTTGCCGGAGAGA +
Preference number: 6 (lower is better)
Translates to: RVRFYPMKLHLY*GACKSLLLPER
Trigger: TCTCTCCGGCAAAAGCAAGGATTTACAAGCACCCCAGTAAAGGTGCAGTTTCATAGGGTAAAAACGAACACG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000207801.2
ENSMUST00000224596.2
CDS CAA 72 bp TCAATCGTAGCAAAAATGTTTAGGAAGGTACATTCTTaGGGGTTCTGCCCACTGCAGTCTTCTCTAGGAGGG +
Preference number: 6 (lower is better)
Translates to: SIVAKMFRKVHS*GFCPLQSSLGG
Trigger: CCCTCCTAGAGAAGACTGCAGTGGGCAGAACCCCAAAGAATGTACCTTCCTAAACATTTTTGCTACGATTGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000207801.2
ENSMUST00000224596.2
CDS CAA 72 bp CCTTCACCATTAAAAACAGTTGCCACGACTCTTCGGTaGGGAAACATGGCCTTACAGTTCCTGGTAAAAGTC +
Preference number: 6 (lower is better)
Translates to: PSPLKTVATTLR*GNMALQFLVKV
Trigger: GACTTTTACCAGGAACTGTAAGGCCATGTTTCCCAACCGAAGAGTCGTGGCAACTGTTTTTAATGGTGAAGG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000207801.2
ENSMUST00000224596.2
CDS CAA 90 bp AAAGCTTTTGTGAGTTCACGATCCATGGCAGTCCAGGAACACCTCTaGCGTCAACATTCCTCAGCACAAATGAACACTTGGATAAGTTTG +
Preference number: 6 (lower is better)
Translates to: KAFVSSRSMAVQEHL*RQHSSAQMNTWISL
Trigger: CAAACTTATCCAAGTGTTCATTTGTGCTGAGGAATGTTGACGCAAGAGGTGTTCCTGGACTGCCATGGATCGTGAACTCACAAAAGCTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000207801.2
CDS CAA 90 bp ATCTACACTTTGCAAGGGACAAAATGGGTCAAACTGCTTATGACATaGCCCCGTCGATGGATTCCAAAGCAAACACTCGTCAGTTTCTTG +
Preference number: 6 (lower is better)
Translates to: IYTLQGTKWVKLLMT*PRRWIPKQTLVSFL
Trigger: CAAGAAACTGACGAGTGTTTGCTTTGGAATCCATCGACGGGGCAATGTCATAAGCAGTTTGACCCATTTTGTCCCTTGCAAAGTGTAGAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000207801.2
ENSMUST00000224596.2
CDS CCA 72 bp AAATGGGTCAAACTGCTTATGACATTGCCCCGTCGATaGATTCCAAAGCAAACACTCGTCAGTTTCTTGAGT +
Preference number: 6 (lower is better)
Translates to: KWVKLLMTLPRR*IPKQTLVSFLS
Trigger: ACTCAAGAAACTGACGAGTGTTTGCTTTGGAATCCATCGACGGGGCAATGTCATAAGCAGTTTGACCCATTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000207801.2
ENSMUST00000224596.2
CDS CAA 90 bp GGTGTTACTCCAGGTATACCCGAGCAAAATGGGTGGGATGTTCACTaGAAATGTCCCACTAATCTCATGTTTTTCAATCACCACTTCATC +
Preference number: 6 (lower is better)
Translates to: GVTPGIPEQNGWDVH*KCPTNLMFFNHHFI
Trigger: GATGAAGTGGTGATTGAAAAACATGAGATTAGTGGGACATTTCAAGTGAACATCCCACCCATTTTGCTCGGGTATACCTGGAGTAACACC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000207801.2
CDS TCA 72 bp CAGGTATACCCGAGCAAAATGGGTGGGATGTTCACTTaGAATGTCCCACTAATCTCATGTTTTTCAATCACC +
Preference number: 6 (lower is better)
Translates to: QVYPSKMGGMFT*NVPLISCFSIT
Trigger: GGTGATTGAAAAACATGAGATTAGTGGGACATTTCAAGTGAACATCCCACCCATTTTGCTCGGGTATACCTG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000207801.2
CDS GCA 72 bp AATCAGAGATACGAATCGGGCAATGAGGTCAAGCGTTaGATTCGAGTCATGAAGAAATATATCCAGAAGCTG +
Preference number: 6 (lower is better)
Translates to: NQRYESGNEVKR*IRVMKKYIQKL
Trigger: CAGCTTCTGGATATATTTCTTCATGACTCGAATGCAACGCTTGACCTCATTGCCCGATTCGTATCTCTGATT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000207801.2
ENSMUST00000224596.2
CDS CCA 72 bp AATATGTTCTGTTATATCCGAGTAGTCTGGGTTATGTaGATCAATCCTGGCATCATCTGCCCACTCACAAAG +
Preference number: 6 (lower is better)
Translates to: NMFCYIRVVWVM*INPGIICPLTK
Trigger: CTTTGTGAGTGGGCAGATGATGCCAGGATTGATCCACATAACCCAGACTACTCGGATATAACAGAACATATT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000207801.2
ENSMUST00000224596.2
CDS CCA 72 bp ATTGAACAAACAATCTACACTTTGCAAGGGACAAAATaGGTCAAACTGCTTATGACATTGCCCCGTCGATGG +
Preference number: 6 (lower is better)
Translates to: IEQTIYTLQGTK*VKLLMTLPRRW
Trigger: CCATCGACGGGGCAATGTCATAAGCAGTTTGACCCATTTTGTCCCTTGCAAAGTGTAGATTGTTTGTTCAAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000207801.2
ENSMUST00000224596.2
CDS CAA 90 bp TTTGCTCCTTTCCATTTCTTCCTCGGACACAAAGTTAAATTCGTCTaGCAACTGCTCAAGACGGAAATATTTGGGGATTTCCTGGCCTTT +
Preference number: 6 (lower is better)
Translates to: FAPFHFFLGHKVKFV*QLLKTEIFGDFLAF
Trigger: AAAGGCCAGGAAATCCCCAAATATTTCCGTCTTGAGCAGTTGCAAGACGAATTTAACTTTGTGTCCGAGGAAGAAATGGAAAGGAGCAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000207801.2
ENSMUST00000224596.2
CDS TCA 72 bp TCTCAGTGTCTCTGTTATGTTTCGATTTTCTTCTTTTaGCAGATGCCTGTCCACCATTTCTTCTGTGCTGCT +
Preference number: 6 (lower is better)
Translates to: SQCLCYVSIFFF*QMPVHHFFCAA
Trigger: AGCAGCACAGAAGAAATGGTGGACAGGCATCTGTCAAAAGAAGAAAATCGAAACATAACAGAGACACTGAGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000207801.2
ENSMUST00000224596.2
CDS GCA 72 bp GTCTCTGTTATGTTTCGATTTTCTTCTTTTGACAGATaGCTGTCCACCATTTCTTCTGTGCTGCTGTTTGCT +
Preference number: 6 (lower is better)
Translates to: VSVMFRFSSFDR*LSTISSVLLFA
Trigger: AGCAAACAGCAGCACAGAAGAAATGGTGGACAGGCATCTGTCAAAAGAAGAAAATCGAAACATAACAGAGAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000207801.2
ENSMUST00000224596.2
CDS CCA 72 bp CAAACACATAATATGTTCTGTTATATCCGAGTAGTCTaGGTTATGTGGATCAATCCTGGCATCATCTGCCCA +
Preference number: 6 (lower is better)
Translates to: QTHNMFCYIRVV*VMWINPGIICP
Trigger: TGGGCAGATGATGCCAGGATTGATCCACATAACCCAGACTACTCGGATATAACAGAACATATTATGTGTTTG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000207801.2
ENSMUST00000224596.2
CDS CCA 72 bp CTATCCTGCTCTTTAGATCTTCTACCATGCTTTTATTaGTGTCCGAGTAAACTATTTCTTCAGGCTGTACGC +
Preference number: 6 (lower is better)
Translates to: LSCSLDLLPCFY*CPSKLFLQAVR
Trigger: GCGTACAGCCTGAAGAAATAGTTTACTCGGACACCAATAAAAGCATGGTAGAAGATCTAAAGAGCAGGATAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000224596.2
CDS TCA 72 bp GATGATGTAAGTGCTCTTAGACTGTGGAATATACTATaGAACTGCACCTTTACTGGGGTGCTTGTAAATCCT +
Preference number: 6 (lower is better)
Translates to: DDVSALRLWNIL*NCTFTGVLVNP
Trigger: AGGATTTACAAGCACCCCAGTAAAGGTGCAGTTTCATAGTATATTCCACAGTCTAAGAGCACTTACATCATC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000207863.2
CDS CAA 72 bp TTAAATTCGTCTTGCAACTGCTCAAGACGGAAATATTaGGGGATTTCCTGGCCTTTGTGTCTCAAACACATA +
Preference number: 6 (lower is better)
Translates to: LNSSCNCSRRKY*GISWPLCLKHI
Trigger: TATGTGTTTGAGACACAAAGGCCAGGAAATCCCCAAATATTTCCGTCTTGAGCAGTTGCAAGACGAATTTAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000207801.2
ENSMUST00000224596.2
CDS CAA 72 bp GTATATTCCAGGACAGTCTTGCCTTTCAGCTCTGTCTaGTTAGGTAAAGGCAGATACAGTTTAACCAGTAAA +
Preference number: 6 (lower is better)
Translates to: VYSRTVLPFSSV*LGKGRYSLTSK
Trigger: TTTACTGGTTAAACTGTATCTGCCTTTACCTAACAAGACAGAGCTGAAAGGCAAGACTGTCCTGGAATATAC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000224596.2
CDS CAA 90 bp GACACAAAGTTAAATTCGTCTTGCAACTGCTCAAGACGGAAATATTaGGGGATTTCCTGGCCTTTGTGTCTCAAACACATAATATGTTCT +
Preference number: 6 (lower is better)
Translates to: DTKLNSSCNCSRRKY*GISWPLCLKHIICS
Trigger: AGAACATATTATGTGTTTGAGACACAAAGGCCAGGAAATCCCCAAATATTTCCGTCTTGAGCAGTTGCAAGACGAATTTAACTTTGTGTC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000207801.2
ENSMUST00000224596.2
CDS CAA 90 bp GCATGGATGAGATCCATTTGCAATGTTGGTTTGATATACAGTGTGTaGAAAGGAAACTTCTATGAAAGGGTGCACAGTATCCTGAAATAC +
Preference number: 6 (lower is better)
Translates to: AWMRSICNVGLIYSV*KGNFYERVHSILKY
Trigger: GTATTTCAGGATACTGTGCACCCTTTCATAGAAGTTTCCTTTCAACACACTGTATATCAAACCAACATTGCAAATGGATCTCATCCATGC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000224596.2
CDS CAA 72 bp TGCTCAAGACGGAAATATTTGGGGATTTCCTGGCCTTaGTGTCTCAAACACATAATATGTTCTGTTATATCC +
Preference number: 6 (lower is better)
Translates to: CSRRKYLGISWP*CLKHIICSVIS
Trigger: GGATATAACAGAACATATTATGTGTTTGAGACACAAAGGCCAGGAAATCCCCAAATATTTCCGTCTTGAGCA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000207801.2
ENSMUST00000224596.2
CDS TCA 72 bp AGAATTAATCCTTTGGGCAGTAATAGAGTTCACATCTaGAATGGGTATATCCTTCTGTGCCTGACTTTCATA +
Preference number: 6 (lower is better)
Translates to: RINPLGSNRVHI*NGYILLCLTFI
Trigger: TATGAAAGTCAGGCACAGAAGGATATACCCATTTCAGATGTGAACTCTATTACTGCCCAAAGGATTAATTCT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000224596.2
CDS GCA 72 bp CTTGATTTCTTCATTCCAGCATGGATGAGATCCATTTaGAATGTTGGTTTGATATACAGTGTGTTGAAAGGA +
Preference number: 6 (lower is better)
Translates to: LDFFIPAWMRSI*NVGLIYSVLKG
Trigger: TCCTTTCAACACACTGTATATCAAACCAACATTGCAAATGGATCTCATCCATGCTGGAATGAAGAAATCAAG
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000224596.2
CDS TCA 72 bp TCGTCTACTTTTGGATTGTACGTGACATATGATATCTaGGGTTCAATCGTAGCAAAAATGTTTAGGAAGGTA +
Preference number: 6 (lower is better)
Translates to: SSTFGLYVTYDI*GSIVAKMFRKV
Trigger: TACCTTCCTAAACATTTTTGCTACGATTGAACCTCAGATATCATATGTCACGTACAATCCAAAAGTAGACGA
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000207801.2
ENSMUST00000224596.2
CDS TCA 72 bp TGGTTTGATATACAGTGTGTTGAAAGGAAACTTCTATaGAAGGGTGCACAGTATCCTGAAATACAGAGTAAA +
Preference number: 6 (lower is better)
Translates to: WFDIQCVERKLL*KGAQYPEIQSK
Trigger: TTTACTCTGTATTTCAGGATACTGTGCACCCTTTCATAGAAGTTTCCTTTCAACACACTGTATATCAAACCA
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000224596.2
CDS CAA 72 bp TCAGCTACAATATCTGACAAGTTAAATTTGTTGACTTaGACGATTCTTTTCATGATCAACCTTCTCACCTGG +
Preference number: 6 (lower is better)
Translates to: SATISDKLNLLT*TILFMINLLTW
Trigger: CCAGGTGAGAAGGTTGATCATGAAAAGAATCGTCAAAGTCAACAAATTTAACTTGTCAGATATTGTAGCTGA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000207801.2