Pregenerated sensors for CBY1 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000022428Ensembl transcript IDs: ENSMUST00000023064.9
Found 33 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | GGTGCAGACAACCCAGAGCCACTTACTGGGCACCCTCACGCGAGGTaGTCTCTGGGAGGAGTGCCAAACCCCAGACACCAGTGTCAAGAG | + |
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Preference number: 1 (lower is better) Translates to: GADNPEPLTGHPHAR*SLGGVPNPRHQCQE Trigger: CTCTTGACACTGGTGTCTGGGGTTTGGCACTCCTCCCAGAGAGCACCTCGCGTGAGGGTGCCCAGTAAGTGGCTCTGGGTTGTCTGCACC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023064.9 |
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| 3UTR CCA 90 bp | ATTGACACCCTGGGTGGACCTGGGGTGCTTGCTTGGCTATGGCCCTaGCCTGGCACCTTGGGTTCTTCCATCCTGTGTCTCCTCCCTATC | + |
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Preference number: 1 (lower is better) Translates to: IDTLGGPGVLAWLWP*PGTLGSSILCLLPI Trigger: GATAGGGAGGAGACACAGGATGGAAGAACCCAAGGTGCCAGGCCAGGGCCATAGCCAAGCAAGCACCCCAGGTCCACCCAGGGTGTCAAT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023064.9 |
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| 3UTR TCA 90 bp | GCTCTCTGGGAGGAGTGCCAAACCCCAGACACCAGTGTCAAGAGGTaGGCTGCCAGCTGTCTGAATATGGTGATTCTGAGACACAGGCAG | + |
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Preference number: 1 (lower is better) Translates to: ALWEECQTPDTSVKR*AASCLNMVILRHRQ Trigger: CTGCCTGTGTCTCAGAATCACCATATTCAGACAGCTGGCAGCTCACCTCTTGACACTGGTGTCTGGGGTTTGGCACTCCTCCCAGAGAGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023064.9 |
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| 3UTR GCA 90 bp | CTGGGAGGAGTGCCAAACCCCAGACACCAGTGTCAAGAGGTGAGCTaGCAGCTGTCTGAATATGGTGATTCTGAGACACAGGCAGTTACA | + |
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Preference number: 1 (lower is better) Translates to: LGGVPNPRHQCQEVS*QLSEYGDSETQAVT Trigger: TGTAACTGCCTGTGTCTCAGAATCACCATATTCAGACAGCTGGCAGCTCACCTCTTGACACTGGTGTCTGGGGTTTGGCACTCCTCCCAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023064.9 |
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| 3UTR GCA 90 bp | CTGAATATGGTGATTCTGAGACACAGGCAGTTACATGCTGTCACTTaGCGACAGCATCCAAGGCTCATTATTTCTAGGCCTTCCTGGGGT | + |
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Preference number: 1 (lower is better) Translates to: LNMVILRHRQLHAVT*RQHPRLIISRPSWG Trigger: ACCCCAGGAAGGCCTAGAAATAATGAGCCTTGGATGCTGTCGGCAAGTGACAGCATGTAACTGCCTGTGTCTCAGAATCACCATATTCAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023064.9 |
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| 3UTR-3UTR GCA 90 bp | GGCTGGGGTGCAGACAACCCAGAGCCACTTACTGGGCACCCTCACGCGAGGTGCCTCCTCCCTATCCCCTaGCCAAGGGAGCCAGGGCCT | + |
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Preference number: 2 (lower is better) Translates to: GWGADNPEPLTGHPHARCLLPIP*PREPGP Trigger: AGGCCCTGGCTCCCTTGGGCAGGGGATAGGGAGGAG...GCACCTCGCGTGAGGGTGCCCAGTAAGTGGCTCTGGGTTGTCTGCACCCCAGCC 67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000023064.9 |
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| 3UTR-3UTR GCA 90 bp | AGGTGCTCTCTGGGAGGAGTGCCAAACCCCAGACACCAGTGTCAAGAGGTGAGCTTACATGCTGTCACTTaGCGACAGCATCCAAGGCTC | + |
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Preference number: 2 (lower is better) Translates to: RCSLGGVPNPRHQCQEVSLHAVT*RQHPRL Trigger: GAGCCTTGGATGCTGTCGGCAAGTGACAGCATGTAA...GCTCACCTCTTGACACTGGTGTCTGGGGTTTGGCACTCCTCCCAGAGAGCACCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023064.9 |
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| 3UTR-3UTR CAA 90 bp | GGGGCTGGGGTGCAGACAACCCAGAGCCACTTACTGGGCACCCTCACGCGAGGTGTGGACCTGGGGTGCTaGCTTGGCTATGGCCCTGGC | + |
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Preference number: 3 (lower is better) Translates to: GAGVQTTQSHLLGTLTRGVDLGC*LGYGPG Trigger: GCCAGGGCCATAGCCAAGCAAGCACCCCAGGTCCAC...ACCTCGCGTGAGGGTGCCCAGTAAGTGGCTCTGGGTTGTCTGCACCCCAGCCCC 67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000023064.9 |
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| 3UTR CCA 72 bp | CGGGGGCTGGGGTGCAGACAACCCAGAGCCACTTACTaGGCACCCTCACGCGAGGTGCTCTCTGGGAGGAGT | + |
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Preference number: 3 (lower is better) Translates to: RGLGCRQPRATY*APSREVLSGRS Trigger: ACTCCTCCCAGAGAGCACCTCGCGTGAGGGTGCCCAGTAAGTGGCTCTGGGTTGTCTGCACCCCAGCCCCCG 67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000023064.9 |
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| 3UTR-3UTR CAA 90 bp | GGGGCTGGGGTGCAGACAACCCAGAGCCACTTACTGGGCACCCTCACGCGAGGTCCCTGGCCTGGCACCTaGGGTTCTTCCATCCTGTGT | + |
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Preference number: 3 (lower is better) Translates to: GAGVQTTQSHLLGTLTRGPWPGT*GSSILC Trigger: ACACAGGATGGAAGAACCCAAGGTGCCAGGCCAGGG...ACCTCGCGTGAGGGTGCCCAGTAAGTGGCTCTGGGTTGTCTGCACCCCAGCCCC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000023064.9 |
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| 3UTR CCA 72 bp | GACACCCTGGGTGGACCTGGGGTGCTTGCTTGGCTATaGCCCTGGCCTGGCACCTTGGGTTCTTCCATCCTG | + |
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Preference number: 3 (lower is better) Translates to: DTLGGPGVLAWL*PWPGTLGSSIL Trigger: CAGGATGGAAGAACCCAAGGTGCCAGGCCAGGGCCATAGCCAAGCAAGCACCCCAGGTCCACCCAGGGTGTC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023064.9 |
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| 3UTR CCA 72 bp | CGGGAAATCAAAGGGCTCTGCCGCATCCTCCTCCCCTaGTCACTGGGCTCTTTCCAGTCCCCTAGCGAGTGC | + |
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Preference number: 3 (lower is better) Translates to: REIKGLCRILLP*SLGSFQSPSEC Trigger: GCACTCGCTAGGGGACTGGAAAGAGCCCAGTGACCAGGGGAGGAGGATGCGGCAGAGCCCTTTGATTTCCCG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000023064.9 |
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| 3UTR CCA 72 bp | CTGGGTGGACCTGGGGTGCTTGCTTGGCTATGGCCCTaGCCTGGCACCTTGGGTTCTTCCATCCTGTGTCTC | + |
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Preference number: 3 (lower is better) Translates to: LGGPGVLAWLWP*PGTLGSSILCL Trigger: GAGACACAGGATGGAAGAACCCAAGGTGCCAGGCCAGGGCCATAGCCAAGCAAGCACCCCAGGTCCACCCAG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023064.9 |
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| 3UTR-3UTR CAA 90 bp | GGGGCTGGGGTGCAGACAACCCAGAGCCACTTACTGGGCACCCTCACGCGAGGTGTTACATGCTGTCACTaGCCGACAGCATCCAAGGCT | + |
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Preference number: 3 (lower is better) Translates to: GAGVQTTQSHLLGTLTRGVTCCH*PTASKA Trigger: AGCCTTGGATGCTGTCGGCAAGTGACAGCATGTAAC...ACCTCGCGTGAGGGTGCCCAGTAAGTGGCTCTGGGTTGTCTGCACCCCAGCCCC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000023064.9 |
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| 3UTR CCA 72 bp | GGGTGCTTGCTTGGCTATGGCCCTGGCCTGGCACCTTaGGTTCTTCCATCCTGTGTCTCCTCCCTATCCCCT | + |
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Preference number: 3 (lower is better) Translates to: GCLLGYGPGLAP*VLPSCVSSLSP Trigger: AGGGGATAGGGAGGAGACACAGGATGGAAGAACCCAAGGTGCCAGGCCAGGGCCATAGCCAAGCAAGCACCC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023064.9 |
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| 3UTR CCA 72 bp | AGCCACTTACTGGGCACCCTCACGCGAGGTGCTCTCTaGGAGGAGTGCCAAACCCCAGACACCAGTGTCAAG | + |
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Preference number: 3 (lower is better) Translates to: SHLLGTLTRGAL*EECQTPDTSVK Trigger: CTTGACACTGGTGTCTGGGGTTTGGCACTCCTCCCAGAGAGCACCTCGCGTGAGGGTGCCCAGTAAGTGGCT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023064.9 |
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| 3UTR GCA 72 bp | GTATGTTTTAGATTGACACCCTGGGTGGACCTGGGGTaGTTGCTTGGCTATGGCCCTGGCCTGGCACCTTGG | + |
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Preference number: 3 (lower is better) Translates to: VCFRLTPWVDLG*LLGYGPGLAPW Trigger: CCAAGGTGCCAGGCCAGGGCCATAGCCAAGCAAGCACCCCAGGTCCACCCAGGGTGTCAATCTAAAACATAC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000023064.9 |
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| 3UTR TCA 72 bp | GAGGAGTGCCAAACCCCAGACACCAGTGTCAAGAGGTaGGCTGCCAGCTGTCTGAATATGGTGATTCTGAGA | + |
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Preference number: 3 (lower is better) Translates to: EECQTPDTSVKR*AASCLNMVILR Trigger: TCTCAGAATCACCATATTCAGACAGCTGGCAGCTCACCTCTTGACACTGGTGTCTGGGGTTTGGCACTCCTC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023064.9 |
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| 3UTR GCA 72 bp | GTGCCAAACCCCAGACACCAGTGTCAAGAGGTGAGCTaGCAGCTGTCTGAATATGGTGATTCTGAGACACAG | + |
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Preference number: 3 (lower is better) Translates to: VPNPRHQCQEVS*QLSEYGDSETQ Trigger: CTGTGTCTCAGAATCACCATATTCAGACAGCTGGCAGCTCACCTCTTGACACTGGTGTCTGGGGTTTGGCAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023064.9 |
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| 3UTR-3UTR CAA 90 bp | GAATATGGTGATTCTGAGACACAGGCAGTTACATGCTGTCACTTGCCGACAGCAGGGGTATGTTTTAGATaGACACCCTGGGTGGACCTG | + |
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Preference number: 3 (lower is better) Translates to: EYGDSETQAVTCCHLPTAGVCFR*TPWVDL Trigger: CAGGTCCACCCAGGGTGTCAATCTAAAACATACCCC...TGCTGTCGGCAAGTGACAGCATGTAACTGCCTGTGTCTCAGAATCACCATATTC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000023064.9 |
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| 3UTR CAA 72 bp | GGGGTGCTTGCTTGGCTATGGCCCTGGCCTGGCACCTaGGGTTCTTCCATCCTGTGTCTCCTCCCTATCCCC | + |
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Preference number: 4 (lower is better) Translates to: GVLAWLWPWPGT*GSSILCLLPIP Trigger: GGGGATAGGGAGGAGACACAGGATGGAAGAACCCAAGGTGCCAGGCCAGGGCCATAGCCAAGCAAGCACCCC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023064.9 |
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| CDS-3UTR CCA 90 bp | ATGGCCCTGGCCTGGCACCTTGGGTTCTTCCATCCTGTGTCTCCTCCCTATCCCCTAAAGAATGTAGGTTaGAGAGAGAGGCCGACTTCC | + |
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Preference number: 4 (lower is better) Translates to: MALAWHLGFFHPVSPPYPLKNVG*RERPTS Trigger: GGAAGTCGGCCTCTCTCTCCAACCTACATTCTTTAG...GGGATAGGGAGGAGACACAGGATGGAAGAACCCAAGGTGCCAGGCCAGGGCCAT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023064.9 |
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| CDS-3UTR CCA 90 bp | GAATATGGTGATTCTGAGACACAGGCAGTTACATGCTGTCACTTGCCGACAGCAGAGTCTGCCACCCACTaGCCGTTTTCAAACTTCAGG | + |
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Preference number: 4 (lower is better) Translates to: EYGDSETQAVTCCHLPTAESATH*PFSNFR Trigger: CCTGAAGTTTGAAAACGGCCAGTGGGTGGCAGACTC...TGCTGTCGGCAAGTGACAGCATGTAACTGCCTGTGTCTCAGAATCACCATATTC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023064.9 |
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| CDS-3UTR TCA 90 bp | TATGGTGATTCTGAGACACAGGCAGTTACATGCTGTCACTTGCCGACAGCATCCCTCAGCAGTGGTTTCTaGAAGCATGTCCAGCAGAAT | + |
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Preference number: 4 (lower is better) Translates to: YGDSETQAVTCCHLPTASLSSGF*KHVQQN Trigger: ATTCTGCTGGACATGCTTTCAGAAACCACTGCTGAG...GGATGCTGTCGGCAAGTGACAGCATGTAACTGCCTGTGTCTCAGAATCACCATA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023064.9 |
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| CDS-3UTR CCA 90 bp | TATGGTGATTCTGAGACACAGGCAGTTACATGCTGTCACTTGCCGACAGCATCCTCTTTGTCCTTTAGGTaGGACTCAGCAGTGGTTTCT | + |
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Preference number: 4 (lower is better) Translates to: YGDSETQAVTCCHLPTASSLSFR*DSAVVS Trigger: AGAAACCACTGCTGAGTCCCACCTAAAGGACAAAGA...GGATGCTGTCGGCAAGTGACAGCATGTAACTGCCTGTGTCTCAGAATCACCATA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023064.9 |
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| CDS-3UTR CAA 90 bp | CTCCCCTGGTCACTGGGCTCTTTCCAGTCCCCTAGCGAGTGCTGCCAGGCTCTCTTCAGCCGCAGGAGATaGTTTTCTTCTTCTAACTGT | + |
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Preference number: 5 (lower is better) Translates to: LPWSLGSFQSPSECCQALFSRRR*FSSSNC Trigger: ACAGTTAGAAGAAGAAAACAATCTCCTGCGGCTGAA...GAGAGCCTGGCAGCACTCGCTAGGGGACTGGAAAGAGCCCAGTGACCAGGGGAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000023064.9 |
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| CDS-3UTR CAA 90 bp | AGGCAGTTACATGCTGTCACTTGCCGACAGCATCCAAGGCTCATTATTTCTAGGTCTAAAGAATGTAGGTaGGAGAGAGAGGCCGACTTC | + |
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Preference number: 5 (lower is better) Translates to: RQLHAVTCRQHPRLIISRSKECR*EREADF Trigger: GAAGTCGGCCTCTCTCTCCAACCTACATTCTTTAGA...CCTAGAAATAATGAGCCTTGGATGCTGTCGGCAAGTGACAGCATGTAACTGCCT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023064.9 |
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| CDS CAA 90 bp | AGCCCCAGCTCCAGTTCCCGCGTTGACCGATCTAAAGAATGTAGGTaGGAGAGAGAGGCCGACTTCCGAGGAGGGGTCTTCTTTGGGCTG | + |
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Preference number: 6 (lower is better) Translates to: SPSSSSRVDRSKECR*EREADFRGGVFFGL Trigger: CAGCCCAAAGAAGACCCCTCCTCGGAAGTCGGCCTCTCTCTCCAACCTACATTCTTTAGATCGGTCAACGCGGGAACTGGAGCTGGGGCT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000023064.9 |
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| CDS CCA 72 bp | CCAGTTCCCGCGTTGACCGATCTAAAGAATGTAGGTTaGAGAGAGAGGCCGACTTCCGAGGAGGGGTCTTCT | + |
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Preference number: 6 (lower is better) Translates to: PVPALTDLKNVG*RERPTSEEGSS Trigger: AGAAGACCCCTCCTCGGAAGTCGGCCTCTCTCTCCAACCTACATTCTTTAGATCGGTCAACGCGGGAACTGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023064.9 |
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| CDS CAA 72 bp | TCCAGTTCCCGCGTTGACCGATCTAAAGAATGTAGGTaGGAGAGAGAGGCCGACTTCCGAGGAGGGGTCTTC | + |
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Preference number: 6 (lower is better) Translates to: SSSRVDRSKECR*EREADFRGGVF Trigger: GAAGACCCCTCCTCGGAAGTCGGCCTCTCTCTCCAACCTACATTCTTTAGATCGGTCAACGCGGGAACTGGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023064.9 |
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| CDS CAA 72 bp | GAGTTCCATAGTCGAGCCCCAGCTCCAGTTCCCGCGTaGACCGATCTAAAGAATGTAGGTTGGAGAGAGAGG | + |
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Preference number: 6 (lower is better) Translates to: EFHSRAPAPVPA*TDLKNVGWRER Trigger: CCTCTCTCTCCAACCTACATTCTTTAGATCGGTCAACGCGGGAACTGGAGCTGGGGCTCGACTATGGAACTC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023064.9 |
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| CDS CCA 72 bp | CATCCAGCTCTTTGTCCTTTAGGTGGGACTCAGCAGTaGTTTCTGAAAGCATGTCCAGCAGAATGTCCACTT | + |
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Preference number: 6 (lower is better) Translates to: HPALCPLGGTQQ*FLKACPAECPL Trigger: AAGTGGACATTCTGCTGGACATGCTTTCAGAAACCACTGCTGAGTCCCACCTAAAGGACAAAGAGCTGGATG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023064.9 |
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| CDS CCA 72 bp | GTAACCTTCAGTTCATCCAGCTCTTTGTCCTTTAGGTaGGACTCAGCAGTGGTTTCTGAAAGCATGTCCAGC | + |
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Preference number: 6 (lower is better) Translates to: VTFSSSSSLSFR*DSAVVSESMSS Trigger: GCTGGACATGCTTTCAGAAACCACTGCTGAGTCCCACCTAAAGGACAAAGAGCTGGATGAACTGAAGGTTAC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023064.9 |
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