Pregenerated sensors for CBX8 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000025578Ensembl transcript IDs: ENSMUST00000026663.8
Found 113 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | CTGCGACCCCCGTGCCCAGCCCGACCGGCCTGGTGCGCAGCCCGCTaGCCGCCCCGCAGGGTGGCTTGGCGGCCGCTCGCTCCTCTAAAA | + |
|
Preference number: 1 (lower is better) Translates to: LRPPCPARPAWCAAR*PPRRVAWRPLAPLK Trigger: TTTTAGAGGAGCGAGCGGCCGCCAAGCCACCCTGCGGGGCGGGCAGCGGGCTGCGCACCAGGCCGGTCGGGCTGGGCACGGGGGTCGCAG 77% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000026663.8 |
||
| 3UTR GCA 90 bp | CATGAGCTCCACCTGACCAAGTTCCAACTCGGGCTGCGACCCCCGTaGCCAGCCCGACCGGCCTGGTGCGCAGCCCGCTGCCCGCCCCGC | + |
|
Preference number: 1 (lower is better) Translates to: HELHLTKFQLGLRPP*PARPAWCAARCPPR Trigger: GCGGGGCGGGCAGCGGGCTGCGCACCAGGCCGGTCGGGCTGGGCACGGGGGTCGCAGCCCGAGTTGGAACTTGGTCAGGTGGAGCTCATG 74% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000026663.8 |
||
| 3UTR TCA 90 bp | CAGGAGGGTTGGGAATCCGGCGGTGGAGGGAGGAGGTGGGCCAGCTaGGTCCCTCCACACACCCTCCAAAATCCCAGGGCCCAGGCCCCC | + |
|
Preference number: 1 (lower is better) Translates to: QEGWESGGGGRRWAS*VPPHTLQNPRAQAP Trigger: GGGGGCCTGGGCCCTGGGATTTTGGAGGGTGTGTGGAGGGACTCAGCTGGCCCACCTCCTCCCTCCACCGCCGGATTCCCAACCCTCCTG 69% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026663.8 |
||
| 3UTR GCA 90 bp | GGCGACTGTAGGCTCGGGGACAGATTTGTGCTTTTGAGTCCGAGCTaGGCGCGGCGCGGTCCGGAGTGGGCCGGGACCAGGGACGCAGAT | + |
|
Preference number: 1 (lower is better) Translates to: GDCRLGDRFVLLSPS*ARRGPEWAGTRDAD Trigger: ATCTGCGTCCCTGGTCCCGGCCCACTCCGGACCGCGCCGCGCGCAGCTCGGACTCAAAAGCACAAATCTGTCCCCGAGCCTACAGTCGCC 68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000026663.8 |
||
| 3UTR TCA 90 bp | TACTGCGCATTCTTGGATGGAAACCCTGCCGAGCCCCTTCGGCCATaGGCTCCACCTGACCAAGTTCCAACTCGGGCTGCGACCCCCGTG | + |
|
Preference number: 1 (lower is better) Translates to: YCAFLDGNPAEPLRP*APPDQVPTRAATPV Trigger: CACGGGGGTCGCAGCCCGAGTTGGAACTTGGTCAGGTGGAGCTCATGGCCGAAGGGGCTCGGCAGGGTTTCCATCCAAGAATGCGCAGTA 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000026663.8 |
||
| 3UTR CCA 90 bp | AGTCAGCCTCTCAAGAGCGAGCTAAGGAGACACACACGACGGCCATaGACAGACGGCAGGACGACGAGGGCAGTGAGGGCAGAATCAGGA | + |
|
Preference number: 1 (lower is better) Translates to: SQPLKSELRRHTRRP*TDGRTTRAVRAESG Trigger: TCCTGATTCTGCCCTCACTGCCCTCGTCGTCCTGCCGTCTGTCCATGGCCGTCGTGTGTGTCTCCTTAGCTCGCTCTTGAGAGGCTGACT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026663.8 |
||
| 3UTR-3UTR GCA 90 bp | CTCCCGCTCCACCTCGCGCTCCCCCGCCCCCTGCGGCGGAGTCTGAACGTCGAGACTTTGCTGGTGCCCTaGAGGGACAGGGGCCCCTCC | + |
|
Preference number: 2 (lower is better) Translates to: LPLHLALPRPLRRSLNVETLLVP*RDRGPS Trigger: GGAGGGGCCCCTGTCCCTGCAGGGCACCAGCAAAGT...CTCGACGTTCAGACTCCGCCGCAGGGGGCGGGGGAGCGCGAGGTGGAGCGGGAG 72% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt. Matches the following 1 transcripts: ENSMUST00000026663.8 |
||
| 3UTR-3UTR CCA 90 bp | CTCCCGCTCCACCTCGCGCTCCCCCGCCCCCTGCGGCGGAGTCTGAACGTCGAGGGCCCCCAACTTTGCTaGTGCCCTGCAGGGACAGGG | + |
|
Preference number: 2 (lower is better) Translates to: LPLHLALPRPLRRSLNVEGPQLC*CPAGTG Trigger: CCCTGTCCCTGCAGGGCACCAGCAAAGTTGGGGGCC...CTCGACGTTCAGACTCCGCCGCAGGGGGCGGGGGAGCGCGAGGTGGAGCGGGAG 72% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt. Matches the following 1 transcripts: ENSMUST00000026663.8 |
||
| 3UTR-3UTR GCA 90 bp | CTCCCGCTCCACCTCGCGCTCCCCCGCCCCCTGCGGCGGAGTCTGAACGTCGAGGAGCTCACTCTCCCCTaGACTGGTCCTGGGCTCCCA | + |
|
Preference number: 2 (lower is better) Translates to: LPLHLALPRPLRRSLNVEELTLP*TGPGLP Trigger: TGGGAGCCCAGGACCAGTGCAGGGGAGAGTGAGCTC...CTCGACGTTCAGACTCCGCCGCAGGGGGCGGGGGAGCGCGAGGTGGAGCGGGAG 71% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000026663.8 |
||
| 3UTR-3UTR CCA 90 bp | CTCCCGCTCCACCTCGCGCTCCCCCGCCCCCTGCGGCGGAGTCTGAACGTCGAGAGTCTTCCTGGGAGGTaGGGCCGCCCTGTCTTCTGG | + |
|
Preference number: 2 (lower is better) Translates to: LPLHLALPRPLRRSLNVESLPGR*GRPVFW Trigger: CCAGAAGACAGGGCGGCCCCACCTCCCAGGAAGACT...CTCGACGTTCAGACTCCGCCGCAGGGGGCGGGGGAGCGCGAGGTGGAGCGGGAG 71% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000026663.8 |
||
| 3UTR-3UTR CCA 90 bp | CGACGGCCATGGACAGACGGCAGGACGACGAGGGCAGTGAGGGCAGAATCAGGACACTCTCCCCTGCACTaGTCCTGGGCTCCCACCCCG | + |
|
Preference number: 2 (lower is better) Translates to: RRPWTDGRTTRAVRAESGHSPLH*SWAPTP Trigger: CGGGGTGGGAGCCCAGGACCAGTGCAGGGGAGAGTG...TCCTGATTCTGCCCTCACTGCCCTCGTCGTCCTGCCGTCTGTCCATGGCCGTCG 67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000026663.8 |
||
| 3UTR-3UTR CCA 90 bp | CGACGGCCATGGACAGACGGCAGGACGACGAGGGCAGTGAGGGCAGAATCAGGATTGGGAATCCGGCGGTaGAGGGAGGAGGTGGGCCAG | + |
|
Preference number: 2 (lower is better) Translates to: RRPWTDGRTTRAVRAESGLGIRR*REEVGQ Trigger: CTGGCCCACCTCCTCCCTCCACCGCCGGATTCCCAA...TCCTGATTCTGCCCTCACTGCCCTCGTCGTCCTGCCGTCTGTCCATGGCCGTCG 66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026663.8 |
||
| 3UTR-3UTR CCA 90 bp | CGACGGCCATGGACAGACGGCAGGACGACGAGGGCAGTGAGGGCAGAATCAGGATTTTGTTGGCCTAGCTaGCCAATGGGGAGGAGAGCA | + |
|
Preference number: 2 (lower is better) Translates to: RRPWTDGRTTRAVRAESGFCWPS*PMGRRA Trigger: TGCTCTCCTCCCCATTGGCCAGCTAGGCCAACAAAA...TCCTGATTCTGCCCTCACTGCCCTCGTCGTCCTGCCGTCTGTCCATGGCCGTCG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000026663.8 |
||
| 3UTR-3UTR CCA 90 bp | AGCTTAGAGCCCCTCCCTCCAAAAGCCCTGGAAGTTAGAGCGTCTGCTGGCCCTAACTGTCTGGCGCTCTaGGCACTGACACGCAATCCT | + |
|
Preference number: 2 (lower is better) Translates to: SLEPLPPKALEVRASAGPNCLAL*ALTRNP Trigger: AGGATTGCGTGTCAGTGCCCAGAGCGCCAGACAGTT...AGGGCCAGCAGACGCTCTAACTTCCAGGGCTTTTGGAGGGAGGGGCTCTAAGCT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000026663.8 |
||
| 3UTR-3UTR TCA 90 bp | ACTAAAGTTCTACTGCGCATTCTTGGATGGAAACCCTGCCGAGCCCCTTCGGCCTGGCGCTCTGGGCACTaGCACGCAATCCTCCCAATT | + |
|
Preference number: 2 (lower is better) Translates to: TKVLLRILGWKPCRAPSAWRSGH*HAILPI Trigger: AATTGGGAGGATTGCGTGTCAGTGCCCAGAGCGCCA...GGCCGAAGGGGCTCGGCAGGGTTTCCATCCAAGAATGCGCAGTAGAACTTTAGT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026663.8 |
||
| 3UTR-3UTR CCA 90 bp | AGCTTAGAGCCCCTCCCTCCAAAAGCCCTGGAAGTTAGAGCGTCTGCTGGCCCTGGCCTAGCTGGCCAATaGGGAGGAGAGCAAAAATCT | + |
|
Preference number: 2 (lower is better) Translates to: SLEPLPPKALEVRASAGPGLAGQ*GGEQKS Trigger: AGATTTTTGCTCTCCTCCCCATTGGCCAGCTAGGCC...AGGGCCAGCAGACGCTCTAACTTCCAGGGCTTTTGGAGGGAGGGGCTCTAAGCT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000026663.8 |
||
| 3UTR-3UTR GCA 90 bp | ACTAAAGTTCTACTGCGCATTCTTGGATGGAAACCCTGCCGAGCCCCTTCGGCCAGAGCAAAAATCTTCTaGGGTGCCAGGAGGGTTGGG | + |
|
Preference number: 2 (lower is better) Translates to: TKVLLRILGWKPCRAPSARAKIF*GARRVG Trigger: CCCAACCCTCCTGGCACCGCAGAAGATTTTTGCTCT...GGCCGAAGGGGCTCGGCAGGGTTTCCATCCAAGAATGCGCAGTAGAACTTTAGT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000026663.8 |
||
| 3UTR-3UTR GCA 90 bp | TGGATACAGACACATTCACAACCCAAGATAGGTACCAAGGGTTCACTCTTGAGCCAGGGGCCCCTCCTGTaGCAGCTCAGTCTATCTCCC | + |
|
Preference number: 2 (lower is better) Translates to: WIQTHSQPKIGTKGSLLSQGPLL*QLSLSP Trigger: GGGAGATAGACTGAGCTGGCACAGGAGGGGCCCCTG...GCTCAAGAGTGAACCCTTGGTACCTATCTTGGGTTGTGAATGTGTCTGTATCCA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000026663.8 |
||
| 3UTR-3UTR CCA 90 bp | ACTAAAGTTCTACTGCGCATTCTTGGATGGAAACCCTGCCGAGCCCCTTCGGCCCCTCCCAATTTATCCTaGCATTTCGGGAATGTAAAC | + |
|
Preference number: 2 (lower is better) Translates to: TKVLLRILGWKPCRAPSAPPNLS*HFGNVN Trigger: GTTTACATTCCCGAAATGCCAGGATAAATTGGGAGG...GGCCGAAGGGGCTCGGCAGGGTTTCCATCCAAGAATGCGCAGTAGAACTTTAGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000026663.8 |
||
| 3UTR-3UTR CCA 90 bp | CCGAATATTTTTCTTGTAAAACAACTGTCTGGCGCTCTGGGCACTGACACGCAAAAGCCAACCTTTTGTTaGCCTAGCTGGCCAATGGGG | + |
|
Preference number: 2 (lower is better) Translates to: PNIFLVKQLSGALGTDTQKPTFC*PSWPMG Trigger: CCCCATTGGCCAGCTAGGCCAACAAAAGGTTGGCTT...TTGCGTGTCAGTGCCCAGAGCGCCAGACAGTTGTTTTACAAGAAAAATATTCGG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENSMUST00000026663.8 |
||
| 3UTR-3UTR GCA 90 bp | ACAGACACAGGCAACAGAGCTTCTTTATACAAAGTCGAAAATACTAGTTTTACAGTGGTCGGGGAGAACTaGGGCCCACTCACTCGCGAC | + |
|
Preference number: 2 (lower is better) Translates to: TDTGNRASLYKVENTSFTVVGEN*GPLTRD Trigger: GTCGCGAGTGAGTGGGCCGCAGTTCTCCCCGACCAC...TGTAAAACTAGTATTTTCGACTTTGTATAAAGAAGCTCTGTTGCCTGTGTCTGT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000026663.8 |
||
| 3UTR-3UTR CCA 90 bp | ACAGACACAGGCAACAGAGCTTCTTTATACAAAGTCGAAAATACTAGTTTTACAGAGAGACCGAGAGTCTaGAGATGGGAAGCCGGGAGT | + |
|
Preference number: 2 (lower is better) Translates to: TDTGNRASLYKVENTSFTERPRV*RWEAGS Trigger: ACTCCCGGCTTCCCATCTCCAGACTCTCGGTCTCTC...TGTAAAACTAGTATTTTCGACTTTGTATAAAGAAGCTCTGTTGCCTGTGTCTGT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000026663.8 |
||
| 3UTR GCA 72 bp | CACCTGACCAAGTTCCAACTCGGGCTGCGACCCCCGTaGCCAGCCCGACCGGCCTGGTGCGCAGCCCGCTGC | + |
|
Preference number: 3 (lower is better) Translates to: HLTKFQLGLRPP*PARPAWCAARC Trigger: GCAGCGGGCTGCGCACCAGGCCGGTCGGGCTGGGCACGGGGGTCGCAGCCCGAGTTGGAACTTGGTCAGGTG 74% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000026663.8 |
||
| 3UTR CCA 72 bp | TGGTGCGCAGCCCGCTGCCCGCCCCGCAGGGTGGCTTaGCGGCCGCTCGCTCCTCTAAAAGCAGGACCCACC | + |
|
Preference number: 3 (lower is better) Translates to: WCAARCPPRRVA*RPLAPLKAGPT Trigger: GGTGGGTCCTGCTTTTAGAGGAGCGAGCGGCCGCCAAGCCACCCTGCGGGGCGGGCAGCGGGCTGCGCACCA 74% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000026663.8 |
||
| 3UTR TCA 72 bp | TCCACCTCGCGCTCCCCCGCCCCCTGCGGCGGAGTCTaGACGTCGAGTTCACGTGGAGAGCACTCCCAGAAT | + |
|
Preference number: 3 (lower is better) Translates to: STSRSPAPCGGV*TSSSRGEHSQN Trigger: ATTCTGGGAGTGCTCTCCACGTGAACTCGACGTTCAGACTCCGCCGCAGGGGGCGGGGGAGCGCGAGGTGGA 67% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000026663.8 |
||
| 3UTR CCA 72 bp | GAGGAGAGCAAAAATCTTCTGCGGTGCCAGGAGGGTTaGGAATCCGGCGGTGGAGGGAGGAGGTGGGCCAGC | + |
|
Preference number: 3 (lower is better) Translates to: EESKNLLRCQEG*ESGGGGRRWAS Trigger: GCTGGCCCACCTCCTCCCTCCACCGCCGGATTCCCAACCCTCCTGGCACCGCAGAAGATTTTTGCTCTCCTC 64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000026663.8 |
||
| 3UTR-3UTR CAA 90 bp | CATAAACCCAACACCCAGGCTCCACAGACTCTGAGCCGCGTGGCCCCCGACCCCGACAGATTTGTGCTTTaGAGTCCGAGCTGCGCGCGG | + |
|
Preference number: 3 (lower is better) Translates to: HKPNTQAPQTLSRVAPDPDRFVL*SPSCAR Trigger: CCGCGCGCAGCTCGGACTCAAAAGCACAAATCTGTC...GGGGTCGGGGGCCACGCGGCTCAGAGTCTGTGGAGCCTGGGTGTTGGGTTTATG 63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000026663.8 |
||
| 3UTR-3UTR CAA 90 bp | ACTAAAGTTCTACTGCGCATTCTTGGATGGAAACCCTGCCGAGCCCCTTCGGCCCCCAGGCCCCCAACTTaGCTGGTGCCCTGCAGGGAC | + |
|
Preference number: 3 (lower is better) Translates to: TKVLLRILGWKPCRAPSAPRPPT*LVPCRD Trigger: GTCCCTGCAGGGCACCAGCAAAGTTGGGGGCCTGGG...GGCCGAAGGGGCTCGGCAGGGTTTCCATCCAAGAATGCGCAGTAGAACTTTAGT 61% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000026663.8 |
||
| 3UTR-3UTR CAA 90 bp | CATAAACCCAACACCCAGGCTCCACAGACTCTGAGCCGCGTGGCCCCCGACCCCGTAACGGGGAGATTTTaGTCCACAGGACACGCACAC | + |
|
Preference number: 3 (lower is better) Translates to: HKPNTQAPQTLSRVAPDPVTGRF*STGHAH Trigger: GTGTGCGTGTCCTGTGGACAAAAATCTCCCCGTTAC...GGGGTCGGGGGCCACGCGGCTCAGAGTCTGTGGAGCCTGGGTGTTGGGTTTATG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENSMUST00000026663.8 |
||
| 3UTR GCA 72 bp | CCTAGCTGGCCAATGGGGAGGAGAGCAAAAATCTTCTaGGGTGCCAGGAGGGTTGGGAATCCGGCGGTGGAG | + |
|
Preference number: 3 (lower is better) Translates to: PSWPMGRRAKIF*GARRVGNPAVE Trigger: CTCCACCGCCGGATTCCCAACCCTCCTGGCACCGCAGAAGATTTTTGCTCTCCTCCCCATTGGCCAGCTAGG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000026663.8 |
||
| 3UTR GCA 72 bp | CATAAAGTGCACCCTCCTGCTGTGGTCGGGGAGAACTaGGGCCCACTCACTCGCGACCTTTTTCTACCTTTA | + |
|
Preference number: 3 (lower is better) Translates to: HKVHPPAVVGEN*GPLTRDLFLPL Trigger: TAAAGGTAGAAAAAGGTCGCGAGTGAGTGGGCCGCAGTTCTCCCCGACCACAGCAGGAGGGTGCACTTTATG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000026663.8 |
||
| 3UTR CCA 72 bp | CGCCCCCTGCGGCGGAGTCTGAACGTCGAGTTCACGTaGAGAGCACTCCCAGAATCGAAAAGGACTATAAAT | + |
|
Preference number: 3 (lower is better) Translates to: RPLRRSLNVEFT*RALPESKRTIN Trigger: ATTTATAGTCCTTTTCGATTCTGGGAGTGCTCTCCACGTGAACTCGACGTTCAGACTCCGCCGCAGGGGGCG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000026663.8 |
||
| 3UTR CCA 72 bp | TTGGGAAGCCAACCTTTTGTTGGCCTAGCTGGCCAATaGGGAGGAGAGCAAAAATCTTCTGCGGTGCCAGGA | + |
|
Preference number: 3 (lower is better) Translates to: LGSQPFVGLAGQ*GGEQKSSAVPG Trigger: TCCTGGCACCGCAGAAGATTTTTGCTCTCCTCCCCATTGGCCAGCTAGGCCAACAAAAGGTTGGCTTCCCAA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000026663.8 |
||
| 3UTR CCA 72 bp | AAGGAAAACACTAAAGTTCTACTGCGCATTCTTGGATaGAAACCCTGCCGAGCCCCTTCGGCCATGAGCTCC | + |
|
Preference number: 3 (lower is better) Translates to: KENTKVLLRILG*KPCRAPSAMSS Trigger: GGAGCTCATGGCCGAAGGGGCTCGGCAGGGTTTCCATCCAAGAATGCGCAGTAGAACTTTAGTGTTTTCCTT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000026663.8 |
||
| 3UTR-3UTR CAA 90 bp | ACAGACACAGGCAACAGAGCTTCTTTATACAAAGTCGAAAATACTAGTTTTACAGCCCCGCAGGGTGGCTaGGCGGCCGCTCGCTCCTCT | + |
|
Preference number: 3 (lower is better) Translates to: TDTGNRASLYKVENTSFTAPQGG*AAARSS Trigger: AGAGGAGCGAGCGGCCGCCAAGCCACCCTGCGGGGC...TGTAAAACTAGTATTTTCGACTTTGTATAAAGAAGCTCTGTTGCCTGTGTCTGT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000026663.8 |
||
| 3UTR TCA 72 bp | TTTTCTTGTAAAACAACTGTCTGGCGCTCTGGGCACTaGCACGCAATCCTCCCAATTTATCCTGGCATTTCG | + |
|
Preference number: 3 (lower is better) Translates to: FSCKTTVWRSGH*HAILPIYPGIS Trigger: CGAAATGCCAGGATAAATTGGGAGGATTGCGTGTCAGTGCCCAGAGCGCCAGACAGTTGTTTTACAAGAAAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000026663.8 |
||
| CDS-3UTR CCA 90 bp | CTCCCGCTCCACCTCGCGCTCCCCCGCCCCCTGCGGCGGAGTCTGAACGTCGAGGTCCCGGTCCCGAGGTaGGTCTGCCCTGCAGGTACT | + |
|
Preference number: 4 (lower is better) Translates to: LPLHLALPRPLRRSLNVEVPVPR*VCPAGT Trigger: AGTACCTGCAGGGCAGACCCACCTCGGGACCGGGAC...CTCGACGTTCAGACTCCGCCGCAGGGGGCGGGGGAGCGCGAGGTGGAGCGGGAG 72% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000026663.8 |
||
| CDS-3UTR GCA 90 bp | CCGCTCCACCTCGCGCTCCCCCGCCCCCTGCGGCGGAGTCTGAACGTCGAGTTCCCCTGCAGGTACTGGTaGTGCTCCCTGGTGGGGGTA | + |
|
Preference number: 4 (lower is better) Translates to: PLHLALPRPLRRSLNVEFPCRYW*CSLVGV Trigger: TACCCCCACCAGGGAGCAGCACCAGTACCTGCAGGG...GAACTCGACGTTCAGACTCCGCCGCAGGGGGCGGGGGAGCGCGAGGTGGAGCGG 70% GC, longest homopolymer 5 nt, total homopolymer stretches 19 nt. Matches the following 1 transcripts: ENSMUST00000026663.8 |
||
| CDS-3UTR GCA 90 bp | CCGCTCCACCTCGCGCTCCCCCGCCCCCTGCGGCGGAGTCTGAACGTCGAGTTCGAGGTGGGTCTGCCCTaGAGGTACTGGTGCTGCTCC | + |
|
Preference number: 4 (lower is better) Translates to: PLHLALPRPLRRSLNVEFEVGLP*RYWCCS Trigger: GGAGCAGCACCAGTACCTGCAGGGCAGACCCACCTC...GAACTCGACGTTCAGACTCCGCCGCAGGGGGCGGGGGAGCGCGAGGTGGAGCGG 70% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000026663.8 |
||
| CDS-3UTR CCA 90 bp | CTCCCGCTCCACCTCGCGCTCCCCCGCCCCCTGCGGCGGAGTCTGAACGTCGAGTGGGTCCTCGCTTTTTaGGGCCATAGAGCTCCATCT | + |
|
Preference number: 4 (lower is better) Translates to: LPLHLALPRPLRRSLNVEWVLAF*GHRAPS Trigger: AGATGGAGCTCTATGGCCCCAAAAAGCGAGGACCCA...CTCGACGTTCAGACTCCGCCGCAGGGGGCGGGGGAGCGCGAGGTGGAGCGGGAG 67% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt. Matches the following 1 transcripts: ENSMUST00000026663.8 |
||
| 3UTR CAA 72 bp | AGCGGCGACTGTAGGCTCGGGGACAGATTTGTGCTTTaGAGTCCGAGCTGCGCGCGGCGCGGTCCGGAGTGG | + |
|
Preference number: 4 (lower is better) Translates to: SGDCRLGDRFVL*SPSCARRGPEW Trigger: CCACTCCGGACCGCGCCGCGCGCAGCTCGGACTCAAAAGCACAAATCTGTCCCCGAGCCTACAGTCGCCGCT 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026663.8 |
||
| CDS-3UTR GCA 90 bp | CCGCTCCACCTCGCGCTCCCCCGCCCCCTGCGGCGGAGTCTGAACGTCGAGTTCATAGGTTTTGGCCTTTaGCTTGGCCTGGGCCTTGAG | + |
|
Preference number: 4 (lower is better) Translates to: PLHLALPRPLRRSLNVEFIGFGL*LGLGLE Trigger: CTCAAGGCCCAGGCCAAGGCAAAGGCCAAAACCTAT...GAACTCGACGTTCAGACTCCGCCGCAGGGGGCGGGGGAGCGCGAGGTGGAGCGG 66% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000026663.8 |
||
| CDS-3UTR CCA 90 bp | CGACGGCCATGGACAGACGGCAGGACGACGAGGGCAGTGAGGGCAGAATCAGGATGTCCCCCGGTGAGCTaGGCTTGTCGTCTACACGGC | + |
|
Preference number: 4 (lower is better) Translates to: RRPWTDGRTTRAVRAESGCPPVS*ACRLHG Trigger: GCCGTGTAGACGACAAGCCCAGCTCACCGGGGGACA...TCCTGATTCTGCCCTCACTGCCCTCGTCGTCCTGCCGTCTGTCCATGGCCGTCG 64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000026663.8 |
||
| CDS-3UTR CCA 90 bp | CGACGGCCATGGACAGACGGCAGGACGACGAGGGCAGTGAGGGCAGAATCAGGAGGGCACCTTGGCCTTTaGCCTCCAGGAAAGCAGCCC | + |
|
Preference number: 4 (lower is better) Translates to: RRPWTDGRTTRAVRAESGGHLGL*PPGKQP Trigger: GGGCTGCTTTCCTGGAGGCCAAAGGCCAAGGTGCCC...TCCTGATTCTGCCCTCACTGCCCTCGTCGTCCTGCCGTCTGTCCATGGCCGTCG 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026663.8 |
||
| 3UTR CAA 72 bp | GGAGGAGAGCAAAAATCTTCTGCGGTGCCAGGAGGGTaGGGAATCCGGCGGTGGAGGGAGGAGGTGGGCCAG | + |
|
Preference number: 4 (lower is better) Translates to: GGEQKSSAVPGG*GIRRWREEVGQ Trigger: CTGGCCCACCTCCTCCCTCCACCGCCGGATTCCCAACCCTCCTGGCACCGCAGAAGATTTTTGCTCTCCTCC 64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000026663.8 |
||
| CDS-3UTR TCA 90 bp | CCTCCAAAAGCCCTGGAAGTTAGAGCGTCTGCTGGCCCTTTAAGGGCGGGGAGGCTGGGATCCTGGCGATaGGGGAGGGCCTTCCCCCTT | + |
|
Preference number: 4 (lower is better) Translates to: PPKALEVRASAGPLRAGRLGSWR*GRAFPL Trigger: AAGGGGGAAGGCCCTCCCTCATCGCCAGGATCCCAG...CCTCCCCGCCCTTAAAGGGCCAGCAGACGCTCTAACTTCCAGGGCTTTTGGAGG 63% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENSMUST00000026663.8 |
||
| CDS-3UTR GCA 90 bp | CCTCCAAAAGCCCTGGAAGTTAGAGCGTCTGCTGGCCCTTTAAGGGCGGGGAGGGTCCCGAGGTGGGTCTaGCCTGCAGGTACTGGTGCT | + |
|
Preference number: 4 (lower is better) Translates to: PPKALEVRASAGPLRAGRVPRWV*PAGTGA Trigger: AGCACCAGTACCTGCAGGGCAGACCCACCTCGGGAC...CCTCCCCGCCCTTAAAGGGCCAGCAGACGCTCTAACTTCCAGGGCTTTTGGAGG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000026663.8 |
||
| CDS-3UTR CCA 90 bp | AGCTTAGAGCCCCTCCCTCCAAAAGCCCTGGAAGTTAGAGCGTCTGCTGGCCCTGGTCCCCCAGGATCCTaGCCACTGGGATCCTGGCGA | + |
|
Preference number: 4 (lower is better) Translates to: SLEPLPPKALEVRASAGPGPPGS*PLGSWR Trigger: TCGCCAGGATCCCAGTGGCCAGGATCCTGGGGGACC...AGGGCCAGCAGACGCTCTAACTTCCAGGGCTTTTGGAGGGAGGGGCTCTAAGCT 62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000026663.8 |
||
| CDS-3UTR CCA 90 bp | CTCCCGCTCCACCTCGCGCTCCCCCGCCCCCTGCGGCGGAGTCTGAACGTCGAGTCCTTAAAGAATCCTTaGTCCGTGTTGCTCTCCTTA | + |
|
Preference number: 4 (lower is better) Translates to: LPLHLALPRPLRRSLNVESLKNP*SVLLSL Trigger: TAAGGAGAGCAACACGGACCAAGGATTCTTTAAGGA...CTCGACGTTCAGACTCCGCCGCAGGGGGCGGGGGAGCGCGAGGTGGAGCGGGAG 62% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000026663.8 |
||
| CDS-3UTR CCA 90 bp | CCTCCAAAAGCCCTGGAAGTTAGAGCGTCTGCTGGCCCTTTAAGGGCGGGGAGGTCGGTCCTCGTTTCTTaGAGCTGTCCCCCGGTGAGC | + |
|
Preference number: 4 (lower is better) Translates to: PPKALEVRASAGPLRAGRSVLVS*SCPPVS Trigger: GCTCACCGGGGGACAGCTCCAAGAAACGAGGACCGA...CCTCCCCGCCCTTAAAGGGCCAGCAGACGCTCTAACTTCCAGGGCTTTTGGAGG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000026663.8 |
||
| CDS-3UTR CCA 90 bp | AGCTTAGAGCCCCTCCCTCCAAAAGCCCTGGAAGTTAGAGCGTCTGCTGGCCCTGGGTCCAGGGCACCTTaGCCTTTGGCCTCCAGGAAA | + |
|
Preference number: 4 (lower is better) Translates to: SLEPLPPKALEVRASAGPGSRAP*PLASRK Trigger: TTTCCTGGAGGCCAAAGGCCAAGGTGCCCTGGACCC...AGGGCCAGCAGACGCTCTAACTTCCAGGGCTTTTGGAGGGAGGGGCTCTAAGCT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000026663.8 |
||
| CDS-3UTR CCA 90 bp | AAACAACTGTCTGGCGCTCTGGGCACTGACACGCAATCCTCCCAATTTATCCTGCTGCCCTGCAGGTACTaGTGCTGCTCCCTGGTGGGG | + |
|
Preference number: 4 (lower is better) Translates to: KQLSGALGTDTQSSQFILLPCRY*CCSLVG Trigger: CCCCACCAGGGAGCAGCACCAGTACCTGCAGGGCAG...CAGGATAAATTGGGAGGATTGCGTGTCAGTGCCCAGAGCGCCAGACAGTTGTTT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026663.8 |
||
| CDS-3UTR GCA 90 bp | ACTAAAGTTCTACTGCGCATTCTTGGATGGAAACCCTGCCGAGCCCCTTCGGCCCCACTGAGGCTGGGGTaGCTGAACTATGTCGAACCC | + |
|
Preference number: 4 (lower is better) Translates to: TKVLLRILGWKPCRAPSAPLRLG*LNYVEP Trigger: GGGTTCGACATAGTTCAGGCACCCCAGCCTCAGTGG...GGCCGAAGGGGCTCGGCAGGGTTTCCATCCAAGAATGCGCAGTAGAACTTTAGT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000026663.8 |
||
| CDS-3UTR CCA 90 bp | AGCTTAGAGCCCCTCCCTCCAAAAGCCCTGGAAGTTAGAGCGTCTGCTGGCCCTAGCTGGATCACACTGTaGCCAGCTGGGAACTTTCCT | + |
|
Preference number: 4 (lower is better) Translates to: SLEPLPPKALEVRASAGPSWITL*PAGNFP Trigger: AGGAAAGTTCCCAGCTGGCCACAGTGTGATCCAGCT...AGGGCCAGCAGACGCTCTAACTTCCAGGGCTTTTGGAGGGAGGGGCTCTAAGCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000026663.8 |
||
| CDS-3UTR CCA 90 bp | CCTCCAAAAGCCCTGGAAGTTAGAGCGTCTGCTGGCCCTTTAAGGGCGGGGAGGCTTTATTACCCTGGCTaGAAAGGTGTCCACAGCCAA | + |
|
Preference number: 4 (lower is better) Translates to: PPKALEVRASAGPLRAGRLYYPG*KGVHSQ Trigger: TTGGCTGTGGACACCTTTCCAGCCAGGGTAATAAAG...CCTCCCCGCCCTTAAAGGGCCAGCAGACGCTCTAACTTCCAGGGCTTTTGGAGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000026663.8 |
||
| CDS-3UTR CCA 90 bp | TTCACAACCCAAGATAGGTACCAAGGGTTCACTCTTGAGCCGAGGCAGAGATCACCAGGACTCTTCCTCTaGGTCCCCCAGGATCCTGGC | + |
|
Preference number: 4 (lower is better) Translates to: FTTQDRYQGFTLEPRQRSPGLFL*VPQDPG Trigger: GCCAGGATCCTGGGGGACCCAGAGGAAGAGTCCTGG...TGATCTCTGCCTCGGCTCAAGAGTGAACCCTTGGTACCTATCTTGGGTTGTGAA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000026663.8 |
||
| CDS-3UTR TCA 90 bp | ACTAAAGTTCTACTGCGCATTCTTGGATGGAAACCCTGCCGAGCCCCTTCGGCCATATTGCACCAGGTCTaGGTCCTGCCTTCGAGCAAG | + |
|
Preference number: 4 (lower is better) Translates to: TKVLLRILGWKPCRAPSAILHQV*VLPSSK Trigger: CTTGCTCGAAGGCAGGACTCAGACCTGGTGCAATAT...GGCCGAAGGGGCTCGGCAGGGTTTCCATCCAAGAATGCGCAGTAGAACTTTAGT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026663.8 |
||
| CDS-3UTR GCA 90 bp | CCGAATATTTTTCTTGTAAAACAACTGTCTGGCGCTCTGGGCACTGACACGCAAGAGGGCCTTCCCCCTTaGGCCCCCATGTCCCGATAC | + |
|
Preference number: 4 (lower is better) Translates to: PNIFLVKQLSGALGTDTQEGLPP*APMSRY Trigger: GTATCGGGACATGGGGGCGCAAGGGGGAAGGCCCTC...TTGCGTGTCAGTGCCCAGAGCGCCAGACAGTTGTTTTACAAGAAAAATATTCGG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 19 nt. Matches the following 1 transcripts: ENSMUST00000026663.8 |
||
| CDS-3UTR TCA 90 bp | AGCTTAGAGCCCCTCCCTCCAAAAGCCCTGGAAGTTAGAGCGTCTGCTGGCCCTGACGGTCAAAAAGTTTaGGGTCACATCTGTAACGAC | + |
|
Preference number: 4 (lower is better) Translates to: SLEPLPPKALEVRASAGPDGQKV*GHICND Trigger: GTCGTTACAGATGTGACCTCAAACTTTTTGACCGTC...AGGGCCAGCAGACGCTCTAACTTCCAGGGCTTTTGGAGGGAGGGGCTCTAAGCT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000026663.8 |
||
| CDS-3UTR GCA 90 bp | TTCACAACCCAAGATAGGTACCAAGGGTTCACTCTTGAGCCGAGGCAGAGATCATGCGTCCTTTGCGAATaGGCCGCTTCAGGAGGGCTT | + |
|
Preference number: 4 (lower is better) Translates to: FTTQDRYQGFTLEPRQRSCVLCE*AASGGL Trigger: AAGCCCTCCTGAAGCGGCGCATTCGCAAAGGACGCA...TGATCTCTGCCTCGGCTCAAGAGTGAACCCTTGGTACCTATCTTGGGTTGTGAA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026663.8 |
||
| CDS-3UTR CCA 90 bp | AAACAACTGTCTGGCGCTCTGGGCACTGACACGCAATCCTCCCAATTTATCCTGCACACTGTGGCCAGCTaGGAACTTTCCTGTCCCAGA | + |
|
Preference number: 4 (lower is better) Translates to: KQLSGALGTDTQSSQFILHTVAS*ELSCPR Trigger: TCTGGGACAGGAAAGTTCCCAGCTGGCCACAGTGTG...CAGGATAAATTGGGAGGATTGCGTGTCAGTGCCCAGAGCGCCAGACAGTTGTTT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026663.8 |
||
| CDS-3UTR GCA 90 bp | ATTGGGAAGCCAACCTTTTGTTGGCCTAGCTGGCCAATGGGGAGGAGAGCAAAACTGGTCACACCATATTaGACCAGGTCTGAGTCCTGC | + |
|
Preference number: 4 (lower is better) Translates to: IGKPTFCWPSWPMGRRAKLVTPY*TRSESC Trigger: GCAGGACTCAGACCTGGTGCAATATGGTGTGACCAG...TTTTGCTCTCCTCCCCATTGGCCAGCTAGGCCAACAAAAGGTTGGCTTCCCAAT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000026663.8 |
||
| CDS-3UTR CCA 90 bp | CCGAATATTTTTCTTGTAAAACAACTGTCTGGCGCTCTGGGCACTGACACGCAACCAGGGGCTCCTTCCTaGGTTTCGGTCCTCGTTTCT | + |
|
Preference number: 4 (lower is better) Translates to: PNIFLVKQLSGALGTDTQPGAPS*VSVLVS Trigger: AGAAACGAGGACCGAAACCCAGGAAGGAGCCCCTGG...TTGCGTGTCAGTGCCCAGAGCGCCAGACAGTTGTTTTACAAGAAAAATATTCGG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000026663.8 |
||
| CDS-3UTR GCA 90 bp | TGGATACAGACACATTCACAACCCAAGATAGGTACCAAGGGTTCACTCTTGAGCCCTTTCCTCAAAGGCTaGAAGGAGGCGAGCATCCAG | + |
|
Preference number: 4 (lower is better) Translates to: WIQTHSQPKIGTKGSLLSPFLKG*KEASIQ Trigger: CTGGATGCTCGCCTCCTTGCAGCCTTTGAGGAAAGG...GCTCAAGAGTGAACCCTTGGTACCTATCTTGGGTTGTGAATGTGTCTGTATCCA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026663.8 |
||
| CDS-3UTR CCA 90 bp | CCGAATATTTTTCTTGTAAAACAACTGTCTGGCGCTCTGGGCACTGACACGCAATGCCTTCGAGCAAGCTaGATCACACTGTGGCCAGCT | + |
|
Preference number: 4 (lower is better) Translates to: PNIFLVKQLSGALGTDTQCLRAS*ITLWPA Trigger: AGCTGGCCACAGTGTGATCCAGCTTGCTCGAAGGCA...TTGCGTGTCAGTGCCCAGAGCGCCAGACAGTTGTTTTACAAGAAAAATATTCGG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000026663.8 |
||
| CDS-3UTR GCA 90 bp | AGAGGCCACAGTCACCCAGAAATAAAAAGCACTAAGCCATTTGAGCTCACTCTCCACGTGCTGTACTTCTaGGACCAGCCCTTCCATTTC | + |
|
Preference number: 4 (lower is better) Translates to: RGHSHPEIKSTKPFELTLHVLYF*DQPFHF Trigger: GAAATGGAAGGGCTGGTCGCAGAAGTACAGCACGTG...GAGAGTGAGCTCAAATGGCTTAGTGCTTTTTATTTCTGGGTGACTGTGGCCTCT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000026663.8 |
||
| CDS-3UTR GCA 90 bp | AGAGGCCACAGTCACCCAGAAATAAAAAGCACTAAGCCATTTGAGCTCACTCTCTCTCATCCAGCTTCCTaGCTTTCAGGTACTCTCCAA | + |
|
Preference number: 4 (lower is better) Translates to: RGHSHPEIKSTKPFELTLSHPAS*LSGTLQ Trigger: TTGGAGAGTACCTGAAAGGCAGGAAGCTGGATGAGA...GAGAGTGAGCTCAAATGGCTTAGTGCTTTTTATTTCTGGGTGACTGTGGCCTCT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000026663.8 |
||
| CDS-3UTR CCA 90 bp | TGGATACAGACACATTCACAACCCAAGATAGGTACCAAGGGTTCACTCTTGAGCTGTGCTTTATTACCCTaGCTGGAAAGGTGTCCACAG | + |
|
Preference number: 4 (lower is better) Translates to: WIQTHSQPKIGTKGSLLSCALLP*LERCPQ Trigger: CTGTGGACACCTTTCCAGCCAGGGTAATAAAGCACA...GCTCAAGAGTGAACCCTTGGTACCTATCTTGGGTTGTGAATGTGTCTGTATCCA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026663.8 |
||
| 3UTR CAA 72 bp | CATTCACAACCCAAGATAGGTACCAAGGGTTCACTCTaGAGCCGAGGCAGAGATCAGTTGGAGATTTATACA | + |
|
Preference number: 4 (lower is better) Translates to: HSQPKIGTKGSL*SRGRDQLEIYT Trigger: TGTATAAATCTCCAACTGATCTCTGCCTCGGCTCAAGAGTGAACCCTTGGTACCTATCTTGGGTTGTGAATG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026663.8 |
||
| CDS-3UTR TCA 90 bp | ACAGACACAGGCAACAGAGCTTCTTTATACAAAGTCGAAAATACTAGTTTTACATCCCAAAGGTCTCTGTaGAGGGTCCAGGGGCTCCTT | + |
|
Preference number: 4 (lower is better) Translates to: TDTGNRASLYKVENTSFTSQRSL*RVQGLL Trigger: AAGGAGCCCCTGGACCCTTCACAGAGACCTTTGGGA...TGTAAAACTAGTATTTTCGACTTTGTATAAAGAAGCTCTGTTGCCTGTGTCTGT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000026663.8 |
||
| CDS-3UTR CCA 90 bp | ACAGACACAGGCAACAGAGCTTCTTTATACAAAGTCGAAAATACTAGTTTTACAGCCTTTGCCTTGGCCTaGGCCTTGAGAAGGAAGGTT | + |
|
Preference number: 4 (lower is better) Translates to: TDTGNRASLYKVENTSFTAFALA*ALRRKV Trigger: AACCTTCCTTCTCAAGGCCCAGGCCAAGGCAAAGGC...TGTAAAACTAGTATTTTCGACTTTGTATAAAGAAGCTCTGTTGCCTGTGTCTGT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000026663.8 |
||
| CDS GCA 90 bp | CTCGGTCCCGGTCCCGAGGTGGGTCTGCCCTGCAGGTACTGGTGCTaGTCCCTGGTGGGGGTAGCCCCGTGTTCCGCAGGCCCTCTCGGG | + |
|
Preference number: 5 (lower is better) Translates to: LGPGPEVGLPCRYWC*SLVGVAPCSAGPLG Trigger: CCCGAGAGGGCCTGCGGAACACGGGGCTACCCCCACCAGGGAGCAGCACCAGTACCTGCAGGGCAGACCCACCTCGGGACCGGGACCGAG 72% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000026663.8 |
||
| CDS GCA 90 bp | TCTCTCGGTCCCGGTCCCGAGGTGGGTCTGCCCTGCAGGTACTGGTaGTGCTCCCTGGTGGGGGTAGCCCCGTGTTCCGCAGGCCCTCTC | + |
|
Preference number: 5 (lower is better) Translates to: SLGPGPEVGLPCRYW*CSLVGVAPCSAGPL Trigger: GAGAGGGCCTGCGGAACACGGGGCTACCCCCACCAGGGAGCAGCACCAGTACCTGCAGGGCAGACCCACCTCGGGACCGGGACCGAGAGA 70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000026663.8 |
||
| CDS TCA 90 bp | CCGCAGGCCCTCTCGGGCCCTGGAAGTAGACGCCAAATCCTGGGGTaGGCGGCCTGGGTAAGGGATCCGGATGCCTCTGGTAGAGTCACT | + |
|
Preference number: 5 (lower is better) Translates to: PQALSGPGSRRQILG*AAWVRDPDASGRVT Trigger: AGTGACTCTACCAGAGGCATCCGGATCCCTTACCCAGGCCGCTCACCCCAGGATTTGGCGTCTACTTCCAGGGCCCGAGAGGGCCTGCGG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026663.8 |
||
| CDS GCA 90 bp | CTTGCGCCCCCATGTCCCGATACAGGCTTCCCACTGAGGCTGGGGTaGCTGAACTATGTCGAACCCTGGCACCACCAGGGTCCAGGGCAC | + |
|
Preference number: 5 (lower is better) Translates to: LAPPCPDTGFPLRLG*LNYVEPWHHQGPGH Trigger: GTGCCCTGGACCCTGGTGGTGCCAGGGTTCGACATAGTTCAGGCACCCCAGCCTCAGTGGGAAGCCTGTATCGGGACATGGGGGCGCAAG 64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000026663.8 |
||
| CDS-3UTR CAA 90 bp | CATAAACCCAACACCCAGGCTCCACAGACTCTGAGCCGCGTGGCCCCCGACCCCTTCGGTCCTCGTTTCTaGGAGCTGTCCCCCGGTGAG | + |
|
Preference number: 5 (lower is better) Translates to: HKPNTQAPQTLSRVAPDPFGPRF*ELSPGE Trigger: CTCACCGGGGGACAGCTCCAAGAAACGAGGACCGAA...GGGGTCGGGGGCCACGCGGCTCAGAGTCTGTGGAGCCTGGGTGTTGGGTTTATG 64% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000026663.8 |
||
| CDS CCA 90 bp | ACAGGCTTCCCACTGAGGCTGGGGTGCCTGAACTATGTCGAACCCTaGCACCACCAGGGTCCAGGGCACCTTGGCCTTTGGCCTCCAGGA | + |
|
Preference number: 5 (lower is better) Translates to: TGFPLRLGCLNYVEP*HHQGPGHLGLWPPG Trigger: TCCTGGAGGCCAAAGGCCAAGGTGCCCTGGACCCTGGTGGTGCCAGGGTTCGACATAGTTCAGGCACCCCAGCCTCAGTGGGAAGCCTGT 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026663.8 |
||
| CDS CCA 90 bp | TCCTGGGTTTCGGTCCTCGTTTCTTGGAGCTGTCCCCCGGTGAGCTaGGCTTGTCGTCTACACGGCTGGTACCCCTGTCCCTCTCTCGGT | + |
|
Preference number: 5 (lower is better) Translates to: SWVSVLVSWSCPPVS*ACRLHGWYPCPSLG Trigger: ACCGAGAGAGGGACAGGGGTACCAGCCGTGTAGACGACAAGCCCAGCTCACCGGGGGACAGCTCCAAGAAACGAGGACCGAAACCCAGGA 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000026663.8 |
||
| CDS CCA 90 bp | TGGGCTCTCCCAAAGGTCTCTGTGAAGGGTCCAGGGGCTCCTTCCTaGGTTTCGGTCCTCGTTTCTTGGAGCTGTCCCCCGGTGAGCTGG | + |
|
Preference number: 5 (lower is better) Translates to: WALPKVSVKGPGAPS*VSVLVSWSCPPVSW Trigger: CCAGCTCACCGGGGGACAGCTCCAAGAAACGAGGACCGAAACCCAGGAAGGAGCCCCTGGACCCTTCACAGAGACCTTTGGGAGAGCCCA 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000026663.8 |
||
| CDS-3UTR CAA 90 bp | CGACGGCCATGGACAGACGGCAGGACGACGAGGGCAGTGAGGGCAGAATCAGGAGCCTTGGCCTGGGCCTaGAGAAGGAAGGTTTTAGGC | + |
|
Preference number: 5 (lower is better) Translates to: RRPWTDGRTTRAVRAESGALAWA*RRKVLG Trigger: GCCTAAAACCTTCCTTCTCAAGGCCCAGGCCAAGGC...TCCTGATTCTGCCCTCACTGCCCTCGTCGTCCTGCCGTCTGTCCATGGCCGTCG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026663.8 |
||
| CDS CCA 90 bp | TCTCATCCAGCTTCCTGCCTTTCAGGTACTCTCCAAGGCCGGCACTaGGCTCTCCCAAAGGTCTCTGTGAAGGGTCCAGGGGCTCCTTCC | + |
|
Preference number: 5 (lower is better) Translates to: SHPASCLSGTLQGRH*ALPKVSVKGPGAPS Trigger: GGAAGGAGCCCCTGGACCCTTCACAGAGACCTTTGGGAGAGCCCAGTGCCGGCCTTGGAGAGTACCTGAAAGGCAGGAAGCTGGATGAGA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026663.8 |
||
| CDS-3UTR CAA 90 bp | AGCTTAGAGCCCCTCCCTCCAAAAGCCCTGGAAGTTAGAGCGTCTGCTGGCCCTGTGTCCACAGCCAACTaGCTCGAGGCCTCTGCTGAG | + |
|
Preference number: 5 (lower is better) Translates to: SLEPLPPKALEVRASAGPVSTAN*LEASAE Trigger: CTCAGCAGAGGCCTCGAGCAAGTTGGCTGTGGACAC...AGGGCCAGCAGACGCTCTAACTTCCAGGGCTTTTGGAGGGAGGGGCTCTAAGCT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000026663.8 |
||
| CDS GCA 90 bp | GGGTCCAGGGCACCTTGGCCTTTGGCCTCCAGGAAAGCAGCCCTGTaGTTTATTACCCTGGCTGGAAAGGTGTCCACAGCCAACTTGCTC | + |
|
Preference number: 5 (lower is better) Translates to: GSRAPWPLASRKAAL*FITLAGKVSTANLL Trigger: GAGCAAGTTGGCTGTGGACACCTTTCCAGCCAGGGTAATAAAGCACAGGGCTGCTTTCCTGGAGGCCAAAGGCCAAGGTGCCCTGGACCC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026663.8 |
||
| CDS GCA 90 bp | CAGCTGGGAACTTTCCTGTCCCAGAAGAGGTCTCATCCAGCTTCCTaGCTTTCAGGTACTCTCCAAGGCCGGCACTGGGCTCTCCCAAAG | + |
|
Preference number: 5 (lower is better) Translates to: QLGTFLSQKRSHPAS*LSGTLQGRHWALPK Trigger: CTTTGGGAGAGCCCAGTGCCGGCCTTGGAGAGTACCTGAAAGGCAGGAAGCTGGATGAGACCTCTTCTGGGACAGGAAAGTTCCCAGCTG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026663.8 |
||
| CDS CCA 90 bp | TGCACCAGGTCTGAGTCCTGCCTTCGAGCAAGCTGGATCACACTGTaGCCAGCTGGGAACTTTCCTGTCCCAGAAGAGGTCTCATCCAGC | + |
|
Preference number: 5 (lower is better) Translates to: CTRSESCLRASWITL*PAGNFPVPEEVSSS Trigger: GCTGGATGAGACCTCTTCTGGGACAGGAAAGTTCCCAGCTGGCCACAGTGTGATCCAGCTTGCTCGAAGGCAGGACTCAGACCTGGTGCA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026663.8 |
||
| CDS-3UTR CAA 90 bp | ATTGGGAAGCCAACCTTTTGTTGGCCTAGCTGGCCAATGGGGAGGAGAGCAAAAAGGGTCCAGGGCACCTaGGCCTTTGGCCTCCAGGAA | + |
|
Preference number: 5 (lower is better) Translates to: IGKPTFCWPSWPMGRRAKRVQGT*AFGLQE Trigger: TTCCTGGAGGCCAAAGGCCAAGGTGCCCTGGACCCT...TTTTGCTCTCCTCCCCATTGGCCAGCTAGGCCAACAAAAGGTTGGCTTCCCAAT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000026663.8 |
||
| CDS GCA 90 bp | GCTGAGCTAGGACTGGTCACACCATATTGCACCAGGTCTGAGTCCTaGCTTCGAGCAAGCTGGATCACACTGTGGCCAGCTGGGAACTTT | + |
|
Preference number: 5 (lower is better) Translates to: AELGLVTPYCTRSES*LRASWITLWPAGNF Trigger: AAAGTTCCCAGCTGGCCACAGTGTGATCCAGCTTGCTCGAAGGCAGGACTCAGACCTGGTGCAATATGGTGTGACCAGTCCTAGCTCAGC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026663.8 |
||
| CDS GCA 90 bp | AACTTGCTCGAGGCCTCTGCTGAGCTAGGACTGGTCACACCATATTaGACCAGGTCTGAGTCCTGCCTTCGAGCAAGCTGGATCACACTG | + |
|
Preference number: 5 (lower is better) Translates to: NLLEASAELGLVTPY*TRSESCLRASWITL Trigger: CAGTGTGATCCAGCTTGCTCGAAGGCAGGACTCAGACCTGGTGCAATATGGTGTGACCAGTCCTAGCTCAGCAGAGGCCTCGAGCAAGTT 56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026663.8 |
||
| CDS CCA 90 bp | GTCACACCATATTGCACCAGGTCTGAGTCCTGCCTTCGAGCAAGCTaGATCACACTGTGGCCAGCTGGGAACTTTCCTGTCCCAGAAGAG | + |
|
Preference number: 5 (lower is better) Translates to: VTPYCTRSESCLRAS*ITLWPAGNFPVPEE Trigger: CTCTTCTGGGACAGGAAAGTTCCCAGCTGGCCACAGTGTGATCCAGCTTGCTCGAAGGCAGGACTCAGACCTGGTGCAATATGGTGTGAC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026663.8 |
||
| CDS-3UTR CAA 90 bp | AGAGGCCACAGTCACCCAGAAATAAAAAGCACTAAGCCATTTGAGCTCACTCTCGGAGGGCCTTCCCCCTaGCGCCCCCATGTCCCGATA | + |
|
Preference number: 5 (lower is better) Translates to: RGHSHPEIKSTKPFELTLGGPSP*RPHVPI Trigger: TATCGGGACATGGGGGCGCAAGGGGGAAGGCCCTCC...GAGAGTGAGCTCAAATGGCTTAGTGCTTTTTATTTCTGGGTGACTGTGGCCTCT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt. Matches the following 1 transcripts: ENSMUST00000026663.8 |
||
| CDS-3UTR CAA 90 bp | AGAGGCCACAGTCACCCAGAAATAAAAAGCACTAAGCCATTTGAGCTCACTCTCCCCGGTGAGCTGGGCTaGTCGTCTACACGGCTGGTA | + |
|
Preference number: 5 (lower is better) Translates to: RGHSHPEIKSTKPFELTLPGELG*SSTRLV Trigger: TACCAGCCGTGTAGACGACAAGCCCAGCTCACCGGG...GAGAGTGAGCTCAAATGGCTTAGTGCTTTTTATTTCTGGGTGACTGTGGCCTCT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000026663.8 |
||
| CDS-3UTR CAA 90 bp | TTCACAACCCAAGATAGGTACCAAGGGTTCACTCTTGAGCCGAGGCAGAGATCAAGGAAGGTTTTAGGCTaGGGTCCTCGCTTTTTGGGG | + |
|
Preference number: 5 (lower is better) Translates to: FTTQDRYQGFTLEPRQRSRKVLG*GPRFLG Trigger: CCCCAAAAAGCGAGGACCCAAGCCTAAAACCTTCCT...TGATCTCTGCCTCGGCTCAAGAGTGAACCCTTGGTACCTATCTTGGGTTGTGAA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000026663.8 |
||
| CDS-3UTR CAA 90 bp | TTCACAACCCAAGATAGGTACCAAGGGTTCACTCTTGAGCCGAGGCAGAGATCAAATCCTTGGTCCGTGTaGCTCTCCTTAATGGTGACG | + |
|
Preference number: 5 (lower is better) Translates to: FTTQDRYQGFTLEPRQRSNPWSV*LSLMVT Trigger: CGTCACCATTAAGGAGAGCAACACGGACCAAGGATT...TGATCTCTGCCTCGGCTCAAGAGTGAACCCTTGGTACCTATCTTGGGTTGTGAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026663.8 |
||
| CDS TCA 90 bp | TCCTTGGTCCGTGTTGCTCTCCTTAATGGTGACGGTCAAAAAGTTTaGGGTCACATCTGTAACGACCACTTTCTCCAGGTTAGTCAGAGA | + |
|
Preference number: 5 (lower is better) Translates to: SLVRVALLNGDGQKV*GHICNDHFLQVSQR Trigger: TCTCTGACTAACCTGGAGAAAGTGGTCGTTACAGATGTGACCTCAAACTTTTTGACCGTCACCATTAAGGAGAGCAACACGGACCAAGGA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000026663.8 |
||
| CDS GCA 72 bp | GGTCCCGAGGTGGGTCTGCCCTGCAGGTACTGGTGCTaGTCCCTGGTGGGGGTAGCCCCGTGTTCCGCAGGC | + |
|
Preference number: 6 (lower is better) Translates to: GPEVGLPCRYWC*SLVGVAPCSAG Trigger: GCCTGCGGAACACGGGGCTACCCCCACCAGGGAGCAGCACCAGTACCTGCAGGGCAGACCCACCTCGGGACC 71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000026663.8 |
||
| CDS GCA 72 bp | CCCGGTCCCGAGGTGGGTCTGCCCTGCAGGTACTGGTaGTGCTCCCTGGTGGGGGTAGCCCCGTGTTCCGCA | + |
|
Preference number: 6 (lower is better) Translates to: PGPEVGLPCRYW*CSLVGVAPCSA Trigger: TGCGGAACACGGGGCTACCCCCACCAGGGAGCAGCACCAGTACCTGCAGGGCAGACCCACCTCGGGACCGGG 71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000026663.8 |
||
| CDS GCA 72 bp | CCCTCTCTCGGTCCCGGTCCCGAGGTGGGTCTGCCCTaGAGGTACTGGTGCTGCTCCCTGGTGGGGGTAGCC | + |
|
Preference number: 6 (lower is better) Translates to: PSLGPGPEVGLP*RYWCCSLVGVA Trigger: GGCTACCCCCACCAGGGAGCAGCACCAGTACCTGCAGGGCAGACCCACCTCGGGACCGGGACCGAGAGAGGG 71% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000026663.8 |
||
| CDS GCA 72 bp | CCTGTCCCTCTCTCGGTCCCGGTCCCGAGGTGGGTCTaGCCTGCAGGTACTGGTGCTGCTCCCTGGTGGGGG | + |
|
Preference number: 6 (lower is better) Translates to: PVPLSVPVPRWV*PAGTGAAPWWG Trigger: CCCCCACCAGGGAGCAGCACCAGTACCTGCAGGGCAGACCCACCTCGGGACCGGGACCGAGAGAGGGACAGG 71% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026663.8 |
||
| CDS CCA 72 bp | GGTCCCGGTCCCGAGGTGGGTCTGCCCTGCAGGTACTaGTGCTGCTCCCTGGTGGGGGTAGCCCCGTGTTCC | + |
|
Preference number: 6 (lower is better) Translates to: GPGPEVGLPCRY*CCSLVGVAPCS Trigger: GGAACACGGGGCTACCCCCACCAGGGAGCAGCACCAGTACCTGCAGGGCAGACCCACCTCGGGACCGGGACC 71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000026663.8 |
||
| CDS GCA 72 bp | ACTGGGATCCTGGCGATGAGGGAGGGCCTTCCCCCTTaGGCCCCCATGTCCCGATACAGGCTTCCCACTGAG | + |
|
Preference number: 6 (lower is better) Translates to: TGILAMREGLPP*APMSRYRLPTE Trigger: CTCAGTGGGAAGCCTGTATCGGGACATGGGGGCGCAAGGGGGAAGGCCCTCCCTCATCGCCAGGATCCCAGT 65% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000026663.8 |
||
| CDS TCA 72 bp | CTCTCGGGCCCTGGAAGTAGACGCCAAATCCTGGGGTaGGCGGCCTGGGTAAGGGATCCGGATGCCTCTGGT | + |
|
Preference number: 6 (lower is better) Translates to: LSGPGSRRQILG*AAWVRDPDASG Trigger: ACCAGAGGCATCCGGATCCCTTACCCAGGCCGCTCACCCCAGGATTTGGCGTCTACTTCCAGGGCCCGAGAG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026663.8 |
||
| CDS CCA 72 bp | TCGGTCCTCGTTTCTTGGAGCTGTCCCCCGGTGAGCTaGGCTTGTCGTCTACACGGCTGGTACCCCTGTCCC | + |
|
Preference number: 6 (lower is better) Translates to: SVLVSWSCPPVS*ACRLHGWYPCP Trigger: GGGACAGGGGTACCAGCCGTGTAGACGACAAGCCCAGCTCACCGGGGGACAGCTCCAAGAAACGAGGACCGA 64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000026663.8 |
||
| CDS CCA 72 bp | CCACTGAGGCTGGGGTGCCTGAACTATGTCGAACCCTaGCACCACCAGGGTCCAGGGCACCTTGGCCTTTGG | + |
|
Preference number: 6 (lower is better) Translates to: PLRLGCLNYVEP*HHQGPGHLGLW Trigger: CCAAAGGCCAAGGTGCCCTGGACCCTGGTGGTGCCAGGGTTCGACATAGTTCAGGCACCCCAGCCTCAGTGG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026663.8 |
||
| CDS CCA 72 bp | CCAGGGGCTCCTTCCTGGGTTTCGGTCCTCGTTTCTTaGAGCTGTCCCCCGGTGAGCTGGGCTTGTCGTCTA | + |
|
Preference number: 6 (lower is better) Translates to: PGAPSWVSVLVS*SCPPVSWACRL Trigger: TAGACGACAAGCCCAGCTCACCGGGGGACAGCTCCAAGAAACGAGGACCGAAACCCAGGAAGGAGCCCCTGG 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000026663.8 |
||
| CDS CAA 72 bp | CCTCGTTTCTTGGAGCTGTCCCCCGGTGAGCTGGGCTaGTCGTCTACACGGCTGGTACCCCTGTCCCTCTCT | + |
|
Preference number: 6 (lower is better) Translates to: PRFLELSPGELG*SSTRLVPLSLS Trigger: AGAGAGGGACAGGGGTACCAGCCGTGTAGACGACAAGCCCAGCTCACCGGGGGACAGCTCCAAGAAACGAGG 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000026663.8 |
||
| CDS CAA 72 bp | TCCAGGGGCTCCTTCCTGGGTTTCGGTCCTCGTTTCTaGGAGCTGTCCCCCGGTGAGCTGGGCTTGTCGTCT | + |
|
Preference number: 6 (lower is better) Translates to: SRGSFLGFGPRF*ELSPGELGLSS Trigger: AGACGACAAGCCCAGCTCACCGGGGGACAGCTCCAAGAAACGAGGACCGAAACCCAGGAAGGAGCCCCTGGA 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000026663.8 |
||
| CDS CCA 72 bp | GCTTCCTGCCTTTCAGGTACTCTCCAAGGCCGGCACTaGGCTCTCCCAAAGGTCTCTGTGAAGGGTCCAGGG | + |
|
Preference number: 6 (lower is better) Translates to: ASCLSGTLQGRH*ALPKVSVKGPG Trigger: CCCTGGACCCTTCACAGAGACCTTTGGGAGAGCCCAGTGCCGGCCTTGGAGAGTACCTGAAAGGCAGGAAGC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026663.8 |
||
| CDS GCA 72 bp | GAGGCCTCTGCTGAGCTAGGACTGGTCACACCATATTaGACCAGGTCTGAGTCCTGCCTTCGAGCAAGCTGG | + |
|
Preference number: 6 (lower is better) Translates to: EASAELGLVTPY*TRSESCLRASW Trigger: CCAGCTTGCTCGAAGGCAGGACTCAGACCTGGTGCAATATGGTGTGACCAGTCCTAGCTCAGCAGAGGCCTC 58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026663.8 |
||
| CDS GCA 72 bp | GGACTGGTCACACCATATTGCACCAGGTCTGAGTCCTaGCTTCGAGCAAGCTGGATCACACTGTGGCCAGCT | + |
|
Preference number: 6 (lower is better) Translates to: GLVTPYCTRSES*LRASWITLWPA Trigger: AGCTGGCCACAGTGTGATCCAGCTTGCTCGAAGGCAGGACTCAGACCTGGTGCAATATGGTGTGACCAGTCC 57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026663.8 |
||
| CDS CCA 72 bp | CTGCCTTCGAGCAAGCTGGATCACACTGTGGCCAGCTaGGAACTTTCCTGTCCCAGAAGAGGTCTCATCCAG | + |
|
Preference number: 6 (lower is better) Translates to: LPSSKLDHTVAS*ELSCPRRGLIQ Trigger: CTGGATGAGACCTCTTCTGGGACAGGAAAGTTCCCAGCTGGCCACAGTGTGATCCAGCTTGCTCGAAGGCAG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026663.8 |
||
| CDS CAA 90 bp | GCCCTGTGCTTTATTACCCTGGCTGGAAAGGTGTCCACAGCCAACTaGCTCGAGGCCTCTGCTGAGCTAGGACTGGTCACACCATATTGC | + |
|
Preference number: 6 (lower is better) Translates to: ALCFITLAGKVSTAN*LEASAELGLVTPYC Trigger: GCAATATGGTGTGACCAGTCCTAGCTCAGCAGAGGCCTCGAGCAAGTTGGCTGTGGACACCTTTCCAGCCAGGGTAATAAAGCACAGGGC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026663.8 |
||
| CDS CCA 72 bp | TATTGCACCAGGTCTGAGTCCTGCCTTCGAGCAAGCTaGATCACACTGTGGCCAGCTGGGAACTTTCCTGTC | + |
|
Preference number: 6 (lower is better) Translates to: YCTRSESCLRAS*ITLWPAGNFPV Trigger: GACAGGAAAGTTCCCAGCTGGCCACAGTGTGATCCAGCTTGCTCGAAGGCAGGACTCAGACCTGGTGCAATA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026663.8 |
||
| CDS CAA 72 bp | TTTATTACCCTGGCTGGAAAGGTGTCCACAGCCAACTaGCTCGAGGCCTCTGCTGAGCTAGGACTGGTCACA | + |
|
Preference number: 6 (lower is better) Translates to: FITLAGKVSTAN*LEASAELGLVT Trigger: TGTGACCAGTCCTAGCTCAGCAGAGGCCTCGAGCAAGTTGGCTGTGGACACCTTTCCAGCCAGGGTAATAAA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026663.8 |
||