Pregenerated sensors for CBX7 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000053411Ensembl transcript IDs: ENSMUST00000089293.11, ENSMUST00000109615.8, ENSMUST00000109616.9, ENSMUST00000128931.8, ENSMUST00000132821.8, ENSMUST00000146719.9, ENSMUST00000177044.2
Found 181 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | ACCCACGGCAAGGGACAGGGAAGGGACACCACCAGAAAGCTGGGGTaGCTGCCTGAGGCAAGGTCTGGACCTCCTGGGCTCCTCCGGCTC | + |
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Preference number: 1 (lower is better) Translates to: THGKGQGRDTTRKLG*LPEARSGPPGLLRL Trigger: GAGCCGGAGGAGCCCAGGAGGTCCAGACCTTGCCTCAGGCAGTCACCCCAGCTTTCTGGTGGTGTCCCTTCCCTGTCCCTTGCCGTGGGT 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000089293.11 ENSMUST00000109616.9 |
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| 3UTR GCA 90 bp | ACGGCAAGGGACAGGGAAGGGACACCACCAGAAAGCTGGGGTGACTaGCTGAGGCAAGGTCTGGACCTCCTGGGCTCCTCCGGCTCCACG | + |
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Preference number: 1 (lower is better) Translates to: TARDREGTPPESWGD*LRQGLDLLGSSGST Trigger: CGTGGAGCCGGAGGAGCCCAGGAGGTCCAGACCTTGCCTCAGGCAGTCACCCCAGCTTTCTGGTGGTGTCCCTTCCCTGTCCCTTGCCGT 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000089293.11 ENSMUST00000109616.9 |
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| 3UTR TCA 90 bp | CAAGGGACAGGGAAGGGACACCACCAGAAAGCTGGGGTGACTGCCTaGGGCAAGGTCTGGACCTCCTGGGCTCCTCCGGCTCCACGGATC | + |
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Preference number: 1 (lower is better) Translates to: QGTGKGHHQKAGVTA*GKVWTSWAPPAPRI Trigger: GATCCGTGGAGCCGGAGGAGCCCAGGAGGTCCAGACCTTGCCTCAGGCAGTCACCCCAGCTTTCTGGTGGTGTCCCTTCCCTGTCCCTTG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000089293.11 ENSMUST00000109616.9 |
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| 3UTR CCA 90 bp | ACACAGGCCAATGGCAGGGAGACAGCACACTCGGAGGAGGCTTGGTaGGCAGCCTCTTCCCTGGTCCAGCCCGTGCCGGTTGTCCTGATC | + |
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Preference number: 1 (lower is better) Translates to: TQANGRETAHSEEAW*AASSLVQPVPVVLI Trigger: GATCAGGACAACCGGCACGGGCTGGACCAGGGAAGAGGCTGCCCACCAAGCCTCCTCCGAGTGTGCTGTCTCCCTGCCATTGGCCTGTGT 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000089293.11 ENSMUST00000109616.9 |
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| 3UTR CCA 90 bp | TCTACACAGGCCAATGGCAGGGAGACAGCACACTCGGAGGAGGCTTaGTGGGCAGCCTCTTCCCTGGTCCAGCCCGTGCCGGTTGTCCTG | + |
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Preference number: 1 (lower is better) Translates to: STQANGRETAHSEEA*WAASSLVQPVPVVL Trigger: CAGGACAACCGGCACGGGCTGGACCAGGGAAGAGGCTGCCCACCAAGCCTCCTCCGAGTGTGCTGTCTCCCTGCCATTGGCCTGTGTAGA 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000089293.11 ENSMUST00000109616.9 |
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| 3UTR GCA 90 bp | GGACACTCCCTCCCTGACTGCCCACATACCACTGGCACCCATGGGTaGCCAGATCGGCTGATTGGCAGGAGAGGGCAGAGAAATTGGGGG | + |
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Preference number: 1 (lower is better) Translates to: GHSLPDCPHTTGTHG*PDRLIGRRGQRNWG Trigger: CCCCCAATTTCTCTGCCCTCTCCTGCCAATCAGCCGATCTGGGCACCCATGGGTGCCAGTGGTATGTGGGCAGTCAGGGAGGGAGTGTCC 62% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000089293.11 ENSMUST00000109616.9 |
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| 3UTR GCA 90 bp | GGAGGAAGGGTGGGCCAGGTGGCTGTGAGCCTGTGTGGAAGCATCTaGACCTTGCACACCAAAGCCTGGTCCAATTGGCGGCTCGGAGAT | + |
|
Preference number: 1 (lower is better) Translates to: GGRVGQVAVSLCGSI*TLHTKAWSNWRLGD Trigger: ATCTCCGAGCCGCCAATTGGACCAGGCTTTGGTGTGCAAGGTGCAGATGCTTCCACACAGGCTCACAGCCACCTGGCCCACCCTTCCTCC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000089293.11 ENSMUST00000109616.9 |
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| 3UTR CCA 90 bp | AACTCCTGTGGGAGGAAGGGTGGGCCAGGTGGCTGTGAGCCTGTGTaGAAGCATCTGCACCTTGCACACCAAAGCCTGGTCCAATTGGCG | + |
|
Preference number: 1 (lower is better) Translates to: NSCGRKGGPGGCEPV*KHLHLAHQSLVQLA Trigger: CGCCAATTGGACCAGGCTTTGGTGTGCAAGGTGCAGATGCTTCCACACAGGCTCACAGCCACCTGGCCCACCCTTCCTCCCACAGGAGTT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000089293.11 ENSMUST00000109616.9 |
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| 3UTR CCA 90 bp | GGGATGGGAAGCATGACACCGAAGGGATTCTGTCCCCCAATATGGTaGGCCATCAAACCCAGCAGCAAAGAAAAGCTCCAGCCACCCTCA | + |
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Preference number: 1 (lower is better) Translates to: GMGSMTPKGFCPPIW*AIKPSSKEKLQPPS Trigger: TGAGGGTGGCTGGAGCTTTTCTTTGCTGCTGGGTTTGATGGCCCACCATATTGGGGGACAGAATCCCTTCGGTGTCATGCTTCCCATCCC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000089293.11 ENSMUST00000109616.9 |
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| 3UTR CCA 90 bp | CTAGGGATGGGAAGCATGACACCGAAGGGATTCTGTCCCCCAATATaGTGGGCCATCAAACCCAGCAGCAAAGAAAAGCTCCAGCCACCC | + |
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Preference number: 1 (lower is better) Translates to: LGMGSMTPKGFCPPI*WAIKPSSKEKLQPP Trigger: GGGTGGCTGGAGCTTTTCTTTGCTGCTGGGTTTGATGGCCCACCATATTGGGGGACAGAATCCCTTCGGTGTCATGCTTCCCATCCCTAG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000089293.11 ENSMUST00000109616.9 |
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| 3UTR TCA 90 bp | GGGGGAAGGCCTATGCCCAATTCCTCCCAATACATTCAGGTCGTCTaGACAAAGCTCGTAGCTCATTCTGTGTGCAAAGGAAGCGGTCTT | + |
|
Preference number: 1 (lower is better) Translates to: GGRPMPNSSQYIQVV*TKLVAHSVCKGSGL Trigger: AAGACCGCTTCCTTTGCACACAGAATGAGCTACGAGCTTTGTTCAGACGACCTGAATGTATTGGGAGGAATTGGGCATAGGCCTTCCCCC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000089293.11 ENSMUST00000109616.9 |
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| 3UTR-3UTR CCA 90 bp | TGGGACACTCCCTCCCTGACTGCCCACATACCACTGGCACCCATGGGTGCCCAGAAGGTCTGGACCTCCTaGGCTCCTCCGGCTCCACGG | + |
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Preference number: 2 (lower is better) Translates to: WDTPSLTAHIPLAPMGAQKVWTS*APPAPR Trigger: CCGTGGAGCCGGAGGAGCCCAGGAGGTCCAGACCTT...CTGGGCACCCATGGGTGCCAGTGGTATGTGGGCAGTCAGGGAGGGAGTGTCCCA 66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000089293.11 ENSMUST00000109616.9 |
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| 3UTR CAA 90 bp | CTCTACACAGGCCAATGGCAGGGAGACAGCACACTCGGAGGAGGCTaGGTGGGCAGCCTCTTCCCTGGTCCAGCCCGTGCCGGTTGTCCT | + |
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Preference number: 2 (lower is better) Translates to: LYTGQWQGDSTLGGG*VGSLFPGPARAGCP Trigger: AGGACAACCGGCACGGGCTGGACCAGGGAAGAGGCTGCCCACCAAGCCTCCTCCGAGTGTGCTGTCTCCCTGCCATTGGCCTGTGTAGAG 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000089293.11 ENSMUST00000109616.9 |
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| 3UTR-3UTR TCA 90 bp | ACAGCACACTCGGAGGAGGCTTGGTGGGCAGCCTCTTCCCTGGTCCAGCCCGTGACCAGAAAGCTGGGGTaGCTGCCTGAGGCAAGGTCT | + |
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Preference number: 2 (lower is better) Translates to: TAHSEEAWWAASSLVQPVTRKLG*LPEARS Trigger: AGACCTTGCCTCAGGCAGTCACCCCAGCTTTCTGGT...CACGGGCTGGACCAGGGAAGAGGCTGCCCACCAAGCCTCCTCCGAGTGTGCTGT 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000089293.11 ENSMUST00000109616.9 |
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| 3UTR-3UTR CCA 90 bp | GGGAGGGAGCCGTCCTCAGGTAGGAAGCTGTCAGCCTATAGGGCACCTGTGCAAAAGGTCTGGACCTCCTaGGCTCCTCCGGCTCCACGG | + |
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Preference number: 2 (lower is better) Translates to: GREPSSGRKLSAYRAPVQKVWTS*APPAPR Trigger: CCGTGGAGCCGGAGGAGCCCAGGAGGTCCAGACCTT...TTGCACAGGTGCCCTATAGGCTGACAGCTTCCTACCTGAGGACGGCTCCCTCCC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000089293.11 ENSMUST00000109616.9 |
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| 3UTR-3UTR TCA 90 bp | TCCACACCAGAGGTTGAGGCACATCTTCACCCCAACCCAGGGAGGGGGAAGTTCGCTGGGGTGACTGCCTaGGGCAAGGTCTGGACCTCC | + |
|
Preference number: 2 (lower is better) Translates to: STPEVEAHLHPNPGRGKFAGVTA*GKVWTS Trigger: GGAGGTCCAGACCTTGCCTCAGGCAGTCACCCCAGC...GAACTTCCCCCTCCCTGGGTTGGGGTGAAGATGTGCCTCAACCTCTGGTGTGGA 62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000089293.11 ENSMUST00000109616.9 |
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| 3UTR-3UTR GCA 90 bp | ATGGCAGGGAGACAGCACACTCGGAGGAGGCTTGGTGGGCAGCCTCTTCCCTGGGAAAGCTGGGGTGACTaGCTGAGGCAAGGTCTGGAC | + |
|
Preference number: 2 (lower is better) Translates to: MAGRQHTRRRLGGQPLPWESWGD*LRQGLD Trigger: GTCCAGACCTTGCCTCAGGCAGTCACCCCAGCTTTC...CCAGGGAAGAGGCTGCCCACCAAGCCTCCTCCGAGTGTGCTGTCTCCCTGCCAT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000089293.11 ENSMUST00000109616.9 |
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| 3UTR-3UTR CCA 90 bp | GTGTGCAAAGGAAGCGGTCTTGCGCAAAGACCTGGTGGCCAGGTCTGGCCCGCCGAATGTGAACTCCTGTaGGAGGAAGGGTGGGCCAGG | + |
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Preference number: 2 (lower is better) Translates to: VCKGSGLAQRPGGQVWPAECELL*EEGWAR Trigger: CCTGGCCCACCCTTCCTCCCACAGGAGTTCACATTC...GGCGGGCCAGACCTGGCCACCAGGTCTTTGCGCAAGACCGCTTCCTTTGCACAC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000089293.11 ENSMUST00000109616.9 |
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| 3UTR CAA 90 bp | AGGGTGGGCCAGGTGGCTGTGAGCCTGTGTGGAAGCATCTGCACCTaGCACACCAAAGCCTGGTCCAATTGGCGGCTCGGAGATGACAGC | + |
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Preference number: 2 (lower is better) Translates to: RVGQVAVSLCGSICT*HTKAWSNWRLGDDS Trigger: GCTGTCATCTCCGAGCCGCCAATTGGACCAGGCTTTGGTGTGCAAGGTGCAGATGCTTCCACACAGGCTCACAGCCACCTGGCCCACCCT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000089293.11 ENSMUST00000109616.9 |
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| 3UTR-3UTR TCA 90 bp | ATATGGTGGGCCATCAAACCCAGCAGCAAAGAAAAGCTCCAGCCACCCTCACCTCCGTGCCGGTTGTCCTaGTCCTGTCCCCGGTGGCCA | + |
|
Preference number: 2 (lower is better) Translates to: IWWAIKPSSKEKLQPPSPPCRLS*SCPRWP Trigger: TGGCCACCGGGGACAGGATCAGGACAACCGGCACGG...AGGTGAGGGTGGCTGGAGCTTTTCTTTGCTGCTGGGTTTGATGGCCCACCATAT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000089293.11 ENSMUST00000109616.9 |
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| 3UTR-3UTR TCA 90 bp | CCCCCAATATGGTGGGCCATCAAACCCAGCAGCAAAGAAAAGCTCCAGCCACCCGGGACACTCCCTCCCTaGCTGCCCACATACCACTGG | + |
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Preference number: 2 (lower is better) Translates to: PPIWWAIKPSSKEKLQPPGTLPP*LPTYHW Trigger: CCAGTGGTATGTGGGCAGTCAGGGAGGGAGTGTCCC...GGGTGGCTGGAGCTTTTCTTTGCTGCTGGGTTTGATGGCCCACCATATTGGGGG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000089293.11 ENSMUST00000109616.9 |
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| 3UTR-3UTR TCA 90 bp | AACCTGATTCATGTTCAACCCCCACAAGGTGGGAGGGGTCATCCATCCTTAGCCGCTGGGGTGACTGCCTaGGGCAAGGTCTGGACCTCC | + |
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Preference number: 2 (lower is better) Translates to: NLIHVQPPQGGRGHPSLAAGVTA*GKVWTS Trigger: GGAGGTCCAGACCTTGCCTCAGGCAGTCACCCCAGC...GGCTAAGGATGGATGACCCCTCCCACCTTGTGGGGGTTGAACATGAATCAGGTT 59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000089293.11 ENSMUST00000109616.9 |
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| 3UTR-3UTR CCA 90 bp | TTTCTGAGGCCTCTTTGTAAACAACCGTCGGGGAGCAAGGGCGGGTGCTGGGGTAGCCCCTCCTGTCTCTaGAAATCCTCACCCAAGCCC | + |
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Preference number: 2 (lower is better) Translates to: FLRPLCKQPSGSKGGCWGSPSCL*KSSPKP Trigger: GGGCTTGGGTGAGGATTTCCAGAGACAGGAGGGGCT...ACCCCAGCACCCGCCCTTGCTCCCCGACGGTTGTTTACAAAGAGGCCTCAGAAA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000089293.11 ENSMUST00000109615.8 |
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| 3UTR-3UTR CCA 90 bp | TATAGCCACTCGAAGCCTTCTGCCATTCTCCCTAGGCGGCCAGTTTCCAGCAGTCACTCGGAGGAGGCTTaGTGGGCAGCCTCTTCCCTG | + |
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Preference number: 2 (lower is better) Translates to: YSHSKPSAILPRRPVSSSHSEEA*WAASSL Trigger: CAGGGAAGAGGCTGCCCACCAAGCCTCCTCCGAGTG...ACTGCTGGAAACTGGCCGCCTAGGGAGAATGGCAGAAGGCTTCGAGTGGCTATA 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000089293.11 ENSMUST00000109616.9 |
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| 3UTR-3UTR TCA 90 bp | GGGCCATCAAACCCAGCAGCAAAGAAAAGCTCCAGCCACCCTCACCTCTCTGGGAGACAAGGACTGCCCTaGGAAAGTGGTGGGACACTC | + |
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Preference number: 2 (lower is better) Translates to: GPSNPAAKKSSSHPHLSGRQGLP*ESGGTL Trigger: GAGTGTCCCACCACTTTCTCAGGGCAGTCCTTGTCT...CCCAGAGAGGTGAGGGTGGCTGGAGCTTTTCTTTGCTGCTGGGTTTGATGGCCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000089293.11 ENSMUST00000109616.9 |
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| 3UTR-3UTR GCA 90 bp | GTGTGCAAAGGAAGCGGTCTTGCGCAAAGACCTGGTGGCCAGGTCTGGCCCGCCAAAGAAGACAAGGACTaGCCTGAGAAAGTGGTGGGA | + |
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Preference number: 2 (lower is better) Translates to: VCKGSGLAQRPGGQVWPAKEDKD*PEKVVG Trigger: TCCCACCACTTTCTCAGGGCAGTCCTTGTCTTCTTT...GGCGGGCCAGACCTGGCCACCAGGTCTTTGCGCAAGACCGCTTCCTTTGCACAC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000089293.11 ENSMUST00000109616.9 |
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| 3UTR-3UTR CCA 90 bp | GCACAAGTGTCCACACCAGAGGTTGAGGCACATCTTCACCCCAACCCAGGGAGGCTCTACACAGGCCAATaGCAGGGAGACAGCACACTC | + |
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Preference number: 2 (lower is better) Translates to: AQVSTPEVEAHLHPNPGRLYTGQ*QGDSTL Trigger: GAGTGTGCTGTCTCCCTGCCATTGGCCTGTGTAGAG...CCTCCCTGGGTTGGGGTGAAGATGTGCCTCAACCTCTGGTGTGGACACTTGTGC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000089293.11 ENSMUST00000109616.9 |
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| 3UTR CAA 90 bp | CAAATGGGCTCAACTGTGGCACTGCACAAGTGTCCACACCAGAGGTaGAGGCACATCTTCACCCCAACCCAGGGAGGGGGAAGTTCAACC | + |
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Preference number: 2 (lower is better) Translates to: QMGSTVALHKCPHQR*RHIFTPTQGGGSST Trigger: GGTTGAACTTCCCCCTCCCTGGGTTGGGGTGAAGATGTGCCTCAACCTCTGGTGTGGACACTTGTGCAGTGCCACAGTTGAGCCCATTTG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000089293.11 ENSMUST00000109616.9 |
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| 3UTR-3UTR TCA 90 bp | ATGGTGGGCCATCAAACCCAGCAGCAAAGAAAAGCTCCAGCCACCCTCACCTCTACCAGAAAGCTGGGGTaGCTGCCTGAGGCAAGGTCT | + |
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Preference number: 2 (lower is better) Translates to: MVGHQTQQQRKAPATLTSTRKLG*LPEARS Trigger: AGACCTTGCCTCAGGCAGTCACCCCAGCTTTCTGGT...AGAGGTGAGGGTGGCTGGAGCTTTTCTTTGCTGCTGGGTTTGATGGCCCACCAT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000089293.11 ENSMUST00000109616.9 |
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| 3UTR-3UTR TCA 90 bp | GCGCAAAGACCTGGTGGCCAGGTCTGGCCCGCCATTTATAAAGCAAAATCGATAGGGACACTCCCTCCCTaGCTGCCCACATACCACTGG | + |
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Preference number: 2 (lower is better) Translates to: AQRPGGQVWPAIYKAKSIGTLPP*LPTYHW Trigger: CCAGTGGTATGTGGGCAGTCAGGGAGGGAGTGTCCC...TATCGATTTTGCTTTATAAATGGCGGGCCAGACCTGGCCACCAGGTCTTTGCGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000089293.11 ENSMUST00000109616.9 |
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| 3UTR-3UTR GCA 90 bp | TATAGCCACTCGAAGCCTTCTGCCATTCTCCCTAGGCGGCCAGTTTCCAGCAGTGAAAGCTGGGGTGACTaGCTGAGGCAAGGTCTGGAC | + |
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Preference number: 2 (lower is better) Translates to: YSHSKPSAILPRRPVSSSESWGD*LRQGLD Trigger: GTCCAGACCTTGCCTCAGGCAGTCACCCCAGCTTTC...ACTGCTGGAAACTGGCCGCCTAGGGAGAATGGCAGAAGGCTTCGAGTGGCTATA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000089293.11 ENSMUST00000109616.9 |
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| 3UTR-3UTR GCA 90 bp | GTGTGCAAAGGAAGCGGTCTTGCGCAAAGACCTGGTGGCCAGGTCTGGCCCGCCAGTTTTCTAAAGGTGTaGATGTTGGGGTGTCCGGAT | + |
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Preference number: 2 (lower is better) Translates to: VCKGSGLAQRPGGQVWPASFLKV*MLGCPD Trigger: ATCCGGACACCCCAACATGCACACCTTTAGAAAACT...GGCGGGCCAGACCTGGCCACCAGGTCTTTGCGCAAGACCGCTTCCTTTGCACAC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000089293.11 ENSMUST00000109616.9 |
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| 3UTR-3UTR GCA 90 bp | GCACAAGTGTCCACACCAGAGGTTGAGGCACATCTTCACCCCAACCCAGGGAGGCTGTGTGGAAGCATCTaGACCTTGCACACCAAAGCC | + |
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Preference number: 2 (lower is better) Translates to: AQVSTPEVEAHLHPNPGRLCGSI*TLHTKA Trigger: GGCTTTGGTGTGCAAGGTGCAGATGCTTCCACACAG...CCTCCCTGGGTTGGGGTGAAGATGTGCCTCAACCTCTGGTGTGGACACTTGTGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000089293.11 ENSMUST00000109616.9 |
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| 3UTR-3UTR GCA 90 bp | ATATGGTGGGCCATCAAACCCAGCAGCAAAGAAAAGCTCCAGCCACCCTCACCTCACTCCCTCCCTGACTaGCCACATACCACTGGCACC | + |
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Preference number: 2 (lower is better) Translates to: IWWAIKPSSKEKLQPPSPHSLPD*PHTTGT Trigger: GGTGCCAGTGGTATGTGGGCAGTCAGGGAGGGAGTG...AGGTGAGGGTGGCTGGAGCTTTTCTTTGCTGCTGGGTTTGATGGCCCACCATAT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000089293.11 ENSMUST00000109616.9 |
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| 3UTR-3UTR CCA 90 bp | TCCACACCAGAGGTTGAGGCACATCTTCACCCCAACCCAGGGAGGGGGAAGTTCGTCCGGATGTGTTCATaGGCATCTCTACACAGGCCA | + |
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Preference number: 2 (lower is better) Translates to: STPEVEAHLHPNPGRGKFVRMCS*ASLHRP Trigger: TGGCCTGTGTAGAGATGCCCATGAACACATCCGGAC...GAACTTCCCCCTCCCTGGGTTGGGGTGAAGATGTGCCTCAACCTCTGGTGTGGA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000089293.11 ENSMUST00000109616.9 |
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| 3UTR-3UTR CCA 90 bp | CCCCCAATATGGTGGGCCATCAAACCCAGCAGCAAAGAAAAGCTCCAGCCACCCGGCTGTGAGCCTGTGTaGAAGCATCTGCACCTTGCA | + |
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Preference number: 2 (lower is better) Translates to: PPIWWAIKPSSKEKLQPPGCEPV*KHLHLA Trigger: TGCAAGGTGCAGATGCTTCCACACAGGCTCACAGCC...GGGTGGCTGGAGCTTTTCTTTGCTGCTGGGTTTGATGGCCCACCATATTGGGGG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000089293.11 ENSMUST00000109616.9 |
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| 3UTR-3UTR CCA 90 bp | AGGTTGAGGCACATCTTCACCCCAACCCAGGGAGGGGGAAGTTCAACCCAACCTCACCTCTCTGGGAGCTaGGGCTTCAAGAACACCAAG | + |
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Preference number: 2 (lower is better) Translates to: RLRHIFTPTQGGGSSTQPHLSGS*GFKNTK Trigger: CTTGGTGTTCTTGAAGCCCCAGCTCCCAGAGAGGTG...AGGTTGGGTTGAACTTCCCCCTCCCTGGGTTGGGGTGAAGATGTGCCTCAACCT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000089293.11 ENSMUST00000109616.9 |
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| 3UTR-3UTR CCA 90 bp | CACTCGAAGCCTTCTGCCATTCTCCCTAGGCGGCCAGTTTCCAGCAGTTCAGAGCACCTCTCTGGGAGCTaGGGCTTCAAGAACACCAAG | + |
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Preference number: 2 (lower is better) Translates to: HSKPSAILPRRPVSSSSEHLSGS*GFKNTK Trigger: CTTGGTGTTCTTGAAGCCCCAGCTCCCAGAGAGGTG...CTCTGAACTGCTGGAAACTGGCCGCCTAGGGAGAATGGCAGAAGGCTTCGAGTG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000089293.11 ENSMUST00000109616.9 |
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| 3UTR-3UTR CCA 90 bp | TATAGCCACTCGAAGCCTTCTGCCATTCTCCCTAGGCGGCCAGTTTCCAGCAGTCCACCCTCACCTCTCTaGGAGCTGGGGCTTCAAGAA | + |
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Preference number: 2 (lower is better) Translates to: YSHSKPSAILPRRPVSSSPPSPL*ELGLQE Trigger: TTCTTGAAGCCCCAGCTCCCAGAGAGGTGAGGGTGG...ACTGCTGGAAACTGGCCGCCTAGGGAGAATGGCAGAAGGCTTCGAGTGGCTATA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000089293.11 ENSMUST00000109616.9 |
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| 3UTR-3UTR GCA 90 bp | CTCTCCTCTCTCTGGCCCACCCAGACATCCTCTAGATTCAGGTCACCCACAGATCCTATAGGGCACCTGTaGAAACCAGCAAACCGCACC | + |
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Preference number: 2 (lower is better) Translates to: LSSLWPTQTSSRFRSPTDPIGHL*KPANRT Trigger: GGTGCGGTTTGCTGGTTTGCACAGGTGCCCTATAGG...ATCTGTGGGTGACCTGAATCTAGAGGATGTCTGGGTGGGCCAGAGAGAGGAGAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000089293.11 ENSMUST00000109616.9 |
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| 3UTR-3UTR CCA 90 bp | AGGTTGAGGCACATCTTCACCCCAACCCAGGGAGGGGGAAGTTCAACCCAACCTGTCCGGATGTGTTCATaGGCATCTCTACACAGGCCA | + |
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Preference number: 2 (lower is better) Translates to: RLRHIFTPTQGGGSSTQPVRMCS*ASLHRP Trigger: TGGCCTGTGTAGAGATGCCCATGAACACATCCGGAC...AGGTTGGGTTGAACTTCCCCCTCCCTGGGTTGGGGTGAAGATGTGCCTCAACCT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000089293.11 ENSMUST00000109616.9 |
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| 3UTR-3UTR CCA 90 bp | ATATGGTGGGCCATCAAACCCAGCAGCAAAGAAAAGCTCCAGCCACCCTCACCTCCATGCCATTCAGGTTaGGTGGGGAGGGGGACAAAG | + |
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Preference number: 2 (lower is better) Translates to: IWWAIKPSSKEKLQPPSPPCHSG*VGRGTK Trigger: CTTTGTCCCCCTCCCCACCCAACCTGAATGGCATGG...AGGTGAGGGTGGCTGGAGCTTTTCTTTGCTGCTGGGTTTGATGGCCCACCATAT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000089293.11 ENSMUST00000109616.9 |
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| 3UTR-3UTR CCA 90 bp | CACTCGAAGCCTTCTGCCATTCTCCCTAGGCGGCCAGTTTCCAGCAGTTCAGAGGTTCCTGTAGCCTACTaGCTGAGGTTCCTGTCTCTC | + |
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Preference number: 2 (lower is better) Translates to: HSKPSAILPRRPVSSSSEVPVAY*LRFLSL Trigger: GAGAGACAGGAACCTCAGCCAGTAGGCTACAGGAAC...CTCTGAACTGCTGGAAACTGGCCGCCTAGGGAGAATGGCAGAAGGCTTCGAGTG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000089293.11 ENSMUST00000109616.9 |
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| 3UTR-3UTR TCA 90 bp | GAGCCGTCCTCAGGTAGGAAGCTGTCAGCCTATAGGGCACCTGTGCAAACCAGCGGCTGGAAAGTCACCTaGGTCAGAAAGAATGTGAAC | + |
|
Preference number: 2 (lower is better) Translates to: EPSSGRKLSAYRAPVQTSGWKVT*VRKNVN Trigger: GTTCACATTCTTTCTGACTCAGGTGACTTTCCAGCC...GCTGGTTTGCACAGGTGCCCTATAGGCTGACAGCTTCCTACCTGAGGACGGCTC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000089293.11 ENSMUST00000109616.9 |
||
| 3UTR-3UTR GCA 90 bp | ACCCTCACCTCTCTGGGAGCTGGGGCTTCAAGAACACCAAGGTCTCCCCACCTCAGTTTTCTAAAGGTGTaGATGTTGGGGTGTCCGGAT | + |
|
Preference number: 2 (lower is better) Translates to: TLTSLGAGASRTPRSPHLSFLKV*MLGCPD Trigger: ATCCGGACACCCCAACATGCACACCTTTAGAAAACT...GAGGTGGGGAGACCTTGGTGTTCTTGAAGCCCCAGCTCCCAGAGAGGTGAGGGT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 2 transcripts: ENSMUST00000089293.11 ENSMUST00000109616.9 |
||
| 3UTR-3UTR GCA 90 bp | TTACCAGATGAGAACCACGTGGGCCAAATGGGCTCAACTGTGGCACTGCACAAGCCTATAGGGCACCTGTaGAAACCAGCAAACCGCACC | + |
|
Preference number: 2 (lower is better) Translates to: LPDENHVGQMGSTVALHKPIGHL*KPANRT Trigger: GGTGCGGTTTGCTGGTTTGCACAGGTGCCCTATAGG...CTTGTGCAGTGCCACAGTTGAGCCCATTTGGCCCACGTGGTTCTCATCTGGTAA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000089293.11 ENSMUST00000109616.9 |
||
| 3UTR-3UTR TCA 90 bp | CTCTCCTCTCTCTGGCCCACCCAGACATCCTCTAGATTCAGGTCACCCACAGATCACTTGTGTGCAACCTaGTTCATGTTCAACCCCCAC | + |
|
Preference number: 2 (lower is better) Translates to: LSSLWPTQTSSRFRSPTDHLCAT*FMFNPH Trigger: GTGGGGGTTGAACATGAATCAGGTTGCACACAAGTG...ATCTGTGGGTGACCTGAATCTAGAGGATGTCTGGGTGGGCCAGAGAGAGGAGAG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000089293.11 ENSMUST00000109616.9 |
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| 3UTR-3UTR CCA 90 bp | AGAAGTCATCCTGCCCTTGTTCATACTGACTCTGCTGGCCTCCTAAAGACACAGAGCCCCTCCTGTCTCTaGAAATCCTCACCCAAGCCC | + |
|
Preference number: 2 (lower is better) Translates to: RSHPALVHTDSAGLLKTQSPSCL*KSSPKP Trigger: GGGCTTGGGTGAGGATTTCCAGAGACAGGAGGGGCT...CTGTGTCTTTAGGAGGCCAGCAGAGTCAGTATGAACAAGGGCAGGATGACTTCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000089293.11 |
||
| 3UTR-3UTR CCA 90 bp | ATATGGTGGGCCATCAAACCCAGCAGCAAAGAAAAGCTCCAGCCACCCTCACCTGTTCCTGTAGCCTACTaGCTGAGGTTCCTGTCTCTC | + |
|
Preference number: 2 (lower is better) Translates to: IWWAIKPSSKEKLQPPSPVPVAY*LRFLSL Trigger: GAGAGACAGGAACCTCAGCCAGTAGGCTACAGGAAC...AGGTGAGGGTGGCTGGAGCTTTTCTTTGCTGCTGGGTTTGATGGCCCACCATAT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000089293.11 ENSMUST00000109616.9 |
||
| 3UTR-3UTR TCA 90 bp | GAGCCGTCCTCAGGTAGGAAGCTGTCAGCCTATAGGGCACCTGTGCAAACCAGCGTTCTGTTTGTGCTGTaGATGGTGTCATGTTCAACT | + |
|
Preference number: 2 (lower is better) Translates to: EPSSGRKLSAYRAPVQTSVLFVL*MVSCST Trigger: AGTTGAACATGACACCATTCACAGCACAAACAGAAC...GCTGGTTTGCACAGGTGCCCTATAGGCTGACAGCTTCCTACCTGAGGACGGCTC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000089293.11 ENSMUST00000109616.9 |
||
| 3UTR-3UTR TCA 90 bp | ATGGTGGGCCATCAAACCCAGCAGCAAAGAAAAGCTCCAGCCACCCTCACCTCTGGCTGGAAAGTCACCTaGGTCAGAAAGAATGTGAAC | + |
|
Preference number: 2 (lower is better) Translates to: MVGHQTQQQRKAPATLTSGWKVT*VRKNVN Trigger: GTTCACATTCTTTCTGACTCAGGTGACTTTCCAGCC...AGAGGTGAGGGTGGCTGGAGCTTTTCTTTGCTGCTGGGTTTGATGGCCCACCAT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000089293.11 ENSMUST00000109616.9 |
||
| 3UTR-3UTR CCA 90 bp | GGGCCATCAAACCCAGCAGCAAAGAAAAGCTCCAGCCACCCTCACCTCTCTGGGACCACAAGGCTGGAGTaGAAAGTTCATAGTAAAGAC | + |
|
Preference number: 2 (lower is better) Translates to: GPSNPAAKKSSSHPHLSGTTRLE*KVHSKD Trigger: GTCTTTACTATGAACTTTCCACTCCAGCCTTGTGGT...CCCAGAGAGGTGAGGGTGGCTGGAGCTTTTCTTTGCTGCTGGGTTTGATGGCCC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000089293.11 ENSMUST00000109616.9 |
||
| 3UTR-3UTR CCA 90 bp | ACCCAACCTCTACATTCAAATATGCAGGGGGAGGGGTTAAGAGATAGGCAGGTGGGCTGTGAGCCTGTGTaGAAGCATCTGCACCTTGCA | + |
|
Preference number: 2 (lower is better) Translates to: TQPLHSNMQGEGLRDRQVGCEPV*KHLHLA Trigger: TGCAAGGTGCAGATGCTTCCACACAGGCTCACAGCC...CACCTGCCTATCTCTTAACCCCTCCCCCTGCATATTTGAATGTAGAGGTTGGGT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000089293.11 ENSMUST00000109616.9 |
||
| 3UTR-3UTR CCA 90 bp | CCAATACATTCAGGTCGTCTGAACAAAGCTCGTAGCTCATTCTGTGTGCAAAGGCCATGCCATTCAGGTTaGGTGGGGAGGGGGACAAAG | + |
|
Preference number: 2 (lower is better) Translates to: PIHSGRLNKARSSFCVQRPCHSG*VGRGTK Trigger: CTTTGTCCCCCTCCCCACCCAACCTGAATGGCATGG...CCTTTGCACACAGAATGAGCTACGAGCTTTGTTCAGACGACCTGAATGTATTGG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000089293.11 ENSMUST00000109616.9 |
||
| 3UTR-3UTR TCA 90 bp | AATATGGTGGGCCATCAAACCCAGCAGCAAAGAAAAGCTCCAGCCACCCTCACCGTTCTGTTTGTGCTGTaGATGGTGTCATGTTCAACT | + |
|
Preference number: 2 (lower is better) Translates to: NMVGHQTQQQRKAPATLTVLFVL*MVSCST Trigger: AGTTGAACATGACACCATTCACAGCACAAACAGAAC...GGTGAGGGTGGCTGGAGCTTTTCTTTGCTGCTGGGTTTGATGGCCCACCATATT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000089293.11 ENSMUST00000109616.9 |
||
| 3UTR-3UTR GCA 90 bp | AATATGGTGGGCCATCAAACCCAGCAGCAAAGAAAAGCTCCAGCCACCCTCACCGGCAAGTTCTGTTTGTaGTGTGAATGGTGTCATGTT | + |
|
Preference number: 2 (lower is better) Translates to: NMVGHQTQQQRKAPATLTGKFCL*CEWCHV Trigger: AACATGACACCATTCACAGCACAAACAGAACTTGCC...GGTGAGGGTGGCTGGAGCTTTTCTTTGCTGCTGGGTTTGATGGCCCACCATATT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000089293.11 ENSMUST00000109616.9 |
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| 3UTR-3UTR GCA 90 bp | CCAATACATTCAGGTCGTCTGAACAAAGCTCGTAGCTCATTCTGTGTGCAAAGGAAAGAAGACAAGGACTaGCCTGAGAAAGTGGTGGGA | + |
|
Preference number: 2 (lower is better) Translates to: PIHSGRLNKARSSFCVQRKEDKD*PEKVVG Trigger: TCCCACCACTTTCTCAGGGCAGTCCTTGTCTTCTTT...CCTTTGCACACAGAATGAGCTACGAGCTTTGTTCAGACGACCTGAATGTATTGG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000089293.11 ENSMUST00000109616.9 |
||
| 3UTR CCA 72 bp | GCCAATGGCAGGGAGACAGCACACTCGGAGGAGGCTTaGTGGGCAGCCTCTTCCCTGGTCCAGCCCGTGCCG | + |
|
Preference number: 3 (lower is better) Translates to: ANGRETAHSEEA*WAASSLVQPVP Trigger: CGGCACGGGCTGGACCAGGGAAGAGGCTGCCCACCAAGCCTCCTCCGAGTGTGCTGTCTCCCTGCCATTGGC 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000089293.11 ENSMUST00000109616.9 |
||
| 3UTR TCA 72 bp | GGGAAGGGACACCACCAGAAAGCTGGGGTGACTGCCTaGGGCAAGGTCTGGACCTCCTGGGCTCCTCCGGCT | + |
|
Preference number: 3 (lower is better) Translates to: GKGHHQKAGVTA*GKVWTSWAPPA Trigger: AGCCGGAGGAGCCCAGGAGGTCCAGACCTTGCCTCAGGCAGTCACCCCAGCTTTCTGGTGGTGTCCCTTCCC 65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000089293.11 ENSMUST00000109616.9 |
||
| 3UTR CCA 72 bp | AATGGCAGGGAGACAGCACACTCGGAGGAGGCTTGGTaGGCAGCCTCTTCCCTGGTCCAGCCCGTGCCGGTT | + |
|
Preference number: 3 (lower is better) Translates to: NGRETAHSEEAW*AASSLVQPVPV Trigger: AACCGGCACGGGCTGGACCAGGGAAGAGGCTGCCCACCAAGCCTCCTCCGAGTGTGCTGTCTCCCTGCCATT 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000089293.11 ENSMUST00000109616.9 |
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| 3UTR-3UTR CAA 90 bp | TGGGACACTCCCTCCCTGACTGCCCACATACCACTGGCACCCATGGGTGCCCAGACACTCGGAGGAGGCTaGGTGGGCAGCCTCTTCCCT | + |
|
Preference number: 3 (lower is better) Translates to: WDTPSLTAHIPLAPMGAQTLGGG*VGSLFP Trigger: AGGGAAGAGGCTGCCCACCAAGCCTCCTCCGAGTGT...CTGGGCACCCATGGGTGCCAGTGGTATGTGGGCAGTCAGGGAGGGAGTGTCCCA 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000089293.11 ENSMUST00000109616.9 |
||
| 3UTR TCA 72 bp | AAGGGACAGGGAAGGGACACCACCAGAAAGCTGGGGTaGCTGCCTGAGGCAAGGTCTGGACCTCCTGGGCTC | + |
|
Preference number: 3 (lower is better) Translates to: KGQGRDTTRKLG*LPEARSGPPGL Trigger: GAGCCCAGGAGGTCCAGACCTTGCCTCAGGCAGTCACCCCAGCTTTCTGGTGGTGTCCCTTCCCTGTCCCTT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000089293.11 ENSMUST00000109616.9 |
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| 3UTR-3UTR CAA 90 bp | GGGAGGGAGCCGTCCTCAGGTAGGAAGCTGTCAGCCTATAGGGCACCTGTGCAAGGAAGCATCTGCACCTaGCACACCAAAGCCTGGTCC | + |
|
Preference number: 3 (lower is better) Translates to: GREPSSGRKLSAYRAPVQGSICT*HTKAWS Trigger: GGACCAGGCTTTGGTGTGCAAGGTGCAGATGCTTCC...TTGCACAGGTGCCCTATAGGCTGACAGCTTCCTACCTGAGGACGGCTCCCTCCC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000089293.11 ENSMUST00000109616.9 |
||
| 3UTR TCA 72 bp | CAACTGTGGCACTGCACAAGTGTCCACACCAGAGGTTaGGGCACATCTTCACCCCAACCCAGGGAGGGGGAA | + |
|
Preference number: 3 (lower is better) Translates to: QLWHCTSVHTRG*GTSSPQPREGE Trigger: TTCCCCCTCCCTGGGTTGGGGTGAAGATGTGCCTCAACCTCTGGTGTGGACACTTGTGCAGTGCCACAGTTG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000089293.11 ENSMUST00000109616.9 |
||
| 3UTR CCA 72 bp | TCCGGATGTGTTCATGGGCATCTCTACACAGGCCAATaGCAGGGAGACAGCACACTCGGAGGAGGCTTGGTG | + |
|
Preference number: 3 (lower is better) Translates to: SGCVHGHLYTGQ*QGDSTLGGGLV Trigger: CACCAAGCCTCCTCCGAGTGTGCTGTCTCCCTGCCATTGGCCTGTGTAGAGATGCCCATGAACACATCCGGA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000089293.11 ENSMUST00000109616.9 |
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| 3UTR CCA 72 bp | CAAGGCCGGCCTCTGTGTCCCACCACAAGGCTGGAGTaGAAAGTTCATAGTAAAGACCCACGGCAAGGGACA | + |
|
Preference number: 3 (lower is better) Translates to: QGRPLCPTTRLE*KVHSKDPRQGT Trigger: TGTCCCTTGCCGTGGGTCTTTACTATGAACTTTCCACTCCAGCCTTGTGGTGGGACACAGAGGCCGGCCTTG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000089293.11 ENSMUST00000109616.9 |
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| 3UTR CCA 72 bp | GGAGTACTGGCCCTGTATGGGGTTAGTGTATGTGGGTaGAGAGGGGGCGTGTTACTGTCCACTTGGGTAGCT | + |
|
Preference number: 3 (lower is better) Translates to: GVLALYGVSVCG*RGGVLLSTWVA Trigger: AGCTACCCAAGTGGACAGTAACACGCCCCCTCTCCACCCACATACACTAACCCCATACAGGGCCAGTACTCC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000089293.11 ENSMUST00000109616.9 |
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| 3UTR-3UTR CAA 90 bp | GCACAAGTGTCCACACCAGAGGTTGAGGCACATCTTCACCCCAACCCAGGGAGGAAAGACACAGCAGAATaGGTAGCTGCTAGGACCCAG | + |
|
Preference number: 3 (lower is better) Translates to: AQVSTPEVEAHLHPNPGRKDTAE*VAARTQ Trigger: CTGGGTCCTAGCAGCTACCAATTCTGCTGTGTCTTT...CCTCCCTGGGTTGGGGTGAAGATGTGCCTCAACCTCTGGTGTGGACACTTGTGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000089293.11 ENSMUST00000109616.9 |
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| 3UTR CCA 72 bp | GGAAGCGGTCTTGCGCAAAGACCTGGTGGCCAGGTCTaGCCCGCCATTTATAAAGCAAAATCGATACCACCT | + |
|
Preference number: 3 (lower is better) Translates to: GSGLAQRPGGQV*PAIYKAKSIPP Trigger: AGGTGGTATCGATTTTGCTTTATAAATGGCGGGCCAGACCTGGCCACCAGGTCTTTGCGCAAGACCGCTTCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000089293.11 ENSMUST00000109616.9 |
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| 3UTR CCA 72 bp | AGCATGACACCGAAGGGATTCTGTCCCCCAATATGGTaGGCCATCAAACCCAGCAGCAAAGAAAAGCTCCAG | + |
|
Preference number: 3 (lower is better) Translates to: SMTPKGFCPPIW*AIKPSSKEKLQ Trigger: CTGGAGCTTTTCTTTGCTGCTGGGTTTGATGGCCCACCATATTGGGGGACAGAATCCCTTCGGTGTCATGCT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000089293.11 ENSMUST00000109616.9 |
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| 3UTR CCA 72 bp | GGAAGCATGACACCGAAGGGATTCTGTCCCCCAATATaGTGGGCCATCAAACCCAGCAGCAAAGAAAAGCTC | + |
|
Preference number: 3 (lower is better) Translates to: GSMTPKGFCPPI*WAIKPSSKEKL Trigger: GAGCTTTTCTTTGCTGCTGGGTTTGATGGCCCACCATATTGGGGGACAGAATCCCTTCGGTGTCATGCTTCC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000089293.11 ENSMUST00000109616.9 |
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| 3UTR-3UTR CAA 90 bp | ATATGGTGGGCCATCAAACCCAGCAGCAAAGAAAAGCTCCAGCCACCCTCACCTCGCGGCAAGTTCTGTTaGTGCTGTGAATGGTGTCAT | + |
|
Preference number: 3 (lower is better) Translates to: IWWAIKPSSKEKLQPPSPRGKFC*CCEWCH Trigger: ATGACACCATTCACAGCACAAACAGAACTTGCCGCG...AGGTGAGGGTGGCTGGAGCTTTTCTTTGCTGCTGGGTTTGATGGCCCACCATAT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000089293.11 ENSMUST00000109616.9 |
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| 3UTR GCA 72 bp | AAGGCGGAGCAAGGGTGCCGCGGCAAGTTCTGTTTGTaGTGTGAATGGTGTCATGTTCAACTGGTCAGTTTT | + |
|
Preference number: 3 (lower is better) Translates to: KAEQGCRGKFCL*CEWCHVQLVSF Trigger: AAAACTGACCAGTTGAACATGACACCATTCACAGCACAAACAGAACTTGCCGCGGCACCCTTGCTCCGCCTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000089293.11 ENSMUST00000109616.9 |
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| 3UTR TCA 72 bp | GGAGCAAGGGTGCCGCGGCAAGTTCTGTTTGTGCTGTaGATGGTGTCATGTTCAACTGGTCAGTTTTCTAAA | + |
|
Preference number: 3 (lower is better) Translates to: GARVPRQVLFVL*MVSCSTGQFSK Trigger: TTTAGAAAACTGACCAGTTGAACATGACACCATTCACAGCACAAACAGAACTTGCCGCGGCACCCTTGCTCC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000089293.11 ENSMUST00000109616.9 |
||
| 3UTR CCA 72 bp | CAAGGGTGCCGCGGCAAGTTCTGTTTGTGCTGTGAATaGTGTCATGTTCAACTGGTCAGTTTTCTAAAGGTG | + |
|
Preference number: 3 (lower is better) Translates to: QGCRGKFCLCCE*CHVQLVSFLKV Trigger: CACCTTTAGAAAACTGACCAGTTGAACATGACACCATTCACAGCACAAACAGAACTTGCCGCGGCACCCTTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000089293.11 ENSMUST00000109616.9 |
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| 3UTR TCA 72 bp | CCTATGCCCAATTCCTCCCAATACATTCAGGTCGTCTaGACAAAGCTCGTAGCTCATTCTGTGTGCAAAGGA | + |
|
Preference number: 3 (lower is better) Translates to: PMPNSSQYIQVV*TKLVAHSVCKG Trigger: TCCTTTGCACACAGAATGAGCTACGAGCTTTGTTCAGACGACCTGAATGTATTGGGAGGAATTGGGCATAGG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000089293.11 ENSMUST00000109616.9 |
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| CDS-3UTR CCA 90 bp | GGAGACAGCACACTCGGAGGAGGCTTGGTGGGCAGCCTCTTCCCTGGTCCAGCCCACTTGAGGGGAGCGTaGGTGTCCAGGGAGGCGGCC | + |
|
Preference number: 4 (lower is better) Translates to: GDSTLGGGLVGSLFPGPAHLRGA*VSREAA Trigger: GGCCGCCTCCCTGGACACCCACGCTCCCCTCAAGTG...GGCTGGACCAGGGAAGAGGCTGCCCACCAAGCCTCCTCCGAGTGTGCTGTCTCC 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000089293.11 ENSMUST00000109616.9 |
||
| 3UTR CAA 72 bp | GGCCAATGGCAGGGAGACAGCACACTCGGAGGAGGCTaGGTGGGCAGCCTCTTCCCTGGTCCAGCCCGTGCC | + |
|
Preference number: 4 (lower is better) Translates to: GQWQGDSTLGGG*VGSLFPGPARA Trigger: GGCACGGGCTGGACCAGGGAAGAGGCTGCCCACCAAGCCTCCTCCGAGTGTGCTGTCTCCCTGCCATTGGCC 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000089293.11 ENSMUST00000109616.9 |
||
| CDS-3UTR TCA 90 bp | AATGGCAGGGAGACAGCACACTCGGAGGAGGCTTGGTGGGCAGCCTCTTCCCTGAAGCCCTCGGCGGCTTaGGCCTCGCGGAAGGTGACG | + |
|
Preference number: 4 (lower is better) Translates to: NGRETAHSEEAWWAASSLKPSAA*ASRKVT Trigger: CGTCACCTTCCGCGAGGCTCAAGCCGCCGAGGGCTT...CAGGGAAGAGGCTGCCCACCAAGCCTCCTCCGAGTGTGCTGTCTCCCTGCCATT 66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000089293.11 ENSMUST00000109616.9 |
||
| CDS-3UTR GCA 90 bp | ATGGCAGGGAGACAGCACACTCGGAGGAGGCTTGGTGGGCAGCCTCTTCCCTGGGGTCAGGTCTGCTTCTaGCTCCTCCTCGGGGGCTTG | + |
|
Preference number: 4 (lower is better) Translates to: MAGRQHTRRRLGGQPLPWGQVCF*LLLGGL Trigger: CAAGCCCCCGAGGAGGAGGCAGAAGCAGACCTGACC...CCAGGGAAGAGGCTGCCCACCAAGCCTCCTCCGAGTGTGCTGTCTCCCTGCCAT 64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000089293.11 ENSMUST00000109616.9 |
||
| CDS-3UTR TCA 90 bp | TTTCTGAGGCCTCTTTGTAAACAACCGTCGGGGAGCAAGGGCGGGTGCTGGGGTAAGCCCTCGGCGGCTTaGGCCTCGCGGAAGGTGACG | + |
|
Preference number: 4 (lower is better) Translates to: FLRPLCKQPSGSKGGCWGKPSAA*ASRKVT Trigger: CGTCACCTTCCGCGAGGCTCAAGCCGCCGAGGGCTT...ACCCCAGCACCCGCCCTTGCTCCCCGACGGTTGTTTACAAAGAGGCCTCAGAAA 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000089293.11 ENSMUST00000109615.8 |
||
| CDS-3UTR GCA 90 bp | GTGTGCAAAGGAAGCGGTCTTGCGCAAAGACCTGGTGGCCAGGTCTGGCCCGCCTCCTCCTCGGGGGCTTaGTCCATAGGCTCCCAGTCT | + |
|
Preference number: 4 (lower is better) Translates to: VCKGSGLAQRPGGQVWPASSSGA*SIGSQS Trigger: AGACTGGGAGCCTATGGAGCAAGCCCCCGAGGAGGA...GGCGGGCCAGACCTGGCCACCAGGTCTTTGCGCAAGACCGCTTCCTTTGCACAC 63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000089293.11 ENSMUST00000109616.9 |
||
| CDS-3UTR GCA 90 bp | TGGGACACTCCCTCCCTGACTGCCCACATACCACTGGCACCCATGGGTGCCCAGTCCTCCTCGGGGGCTTaGTCCATAGGCTCCCAGTCT | + |
|
Preference number: 4 (lower is better) Translates to: WDTPSLTAHIPLAPMGAQSSSGA*SIGSQS Trigger: AGACTGGGAGCCTATGGAGCAAGCCCCCGAGGAGGA...CTGGGCACCCATGGGTGCCAGTGGTATGTGGGCAGTCAGGGAGGGAGTGTCCCA 63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000089293.11 ENSMUST00000109616.9 |
||
| CDS-3UTR GCA 90 bp | GTGTGCAAAGGAAGCGGTCTTGCGCAAAGACCTGGTGGCCAGGTCTGGCCCGCCCCCATTGGTCAGGTCTaGTTCTGCCTCCTCCTCGGG | + |
|
Preference number: 4 (lower is better) Translates to: VCKGSGLAQRPGGQVWPAPIGQV*FCLLLG Trigger: CCCGAGGAGGAGGCAGAAGCAGACCTGACCAATGGG...GGCGGGCCAGACCTGGCCACCAGGTCTTTGCGCAAGACCGCTTCCTTTGCACAC 63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000089293.11 ENSMUST00000109616.9 |
||
| CDS-3UTR CCA 90 bp | TTTCTGAGGCCTCTTTGTAAACAACCGTCGGGGAGCAAGGGCGGGTGCTGGGGTCACTTGAGGGGAGCGTaGGTGTCCAGGGAGGCGGCC | + |
|
Preference number: 4 (lower is better) Translates to: FLRPLCKQPSGSKGGCWGHLRGA*VSREAA Trigger: GGCCGCCTCCCTGGACACCCACGCTCCCCTCAAGTG...ACCCCAGCACCCGCCCTTGCTCCCCGACGGTTGTTTACAAAGAGGCCTCAGAAA 63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000089293.11 ENSMUST00000109615.8 |
||
| CDS-3UTR TCA 90 bp | CAGAGGCGTACTGGGCAGGGTAGCCTGTCCCCATCTGCCCAGGAGATGAGACCCTCTCCTCGTAGGCCATaGCAAGGCGAGGGTCCAAGA | + |
|
Preference number: 4 (lower is better) Translates to: QRRTGQGSLSPSAQEMRPSPRRP*QGEGPR Trigger: TCTTGGACCCTCGCCTTGTCATGGCCTACGAGGAGA...GGGTCTCATCTCCTGGGCAGATGGGGACAGGCTACCCTGCCCAGTACGCCTCTG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000089293.11 |
||
| CDS-3UTR TCA 90 bp | GGGAGGGAGCCGTCCTCAGGTAGGAAGCTGTCAGCCTATAGGGCACCTGTGCAAAACGTCTGGGGCTGCTaGCTCCTGCAGGGAGAGCTC | + |
|
Preference number: 4 (lower is better) Translates to: GREPSSGRKLSAYRAPVQNVWGC*LLQGEL Trigger: GAGCTCTCCCTGCAGGAGTCAGCAGCCCCAGACGTT...TTGCACAGGTGCCCTATAGGCTGACAGCTTCCTACCTGAGGACGGCTCCCTCCC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000089293.11 |
||
| CDS-3UTR CCA 90 bp | ATGGCAGGGAGACAGCACACTCGGAGGAGGCTTGGTGGGCAGCCTCTTCCCTGGGTAGCAGAAGCCGCCTaGGTTTCGGACCTCTCTTCC | + |
|
Preference number: 4 (lower is better) Translates to: MAGRQHTRRRLGGQPLPWVAEAA*VSDLSS Trigger: GGAAGAGAGGTCCGAAACCCAGGCGGCTTCTGCTAC...CCAGGGAAGAGGCTGCCCACCAAGCCTCCTCCGAGTGTGCTGTCTCCCTGCCAT 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000089293.11 ENSMUST00000109616.9 |
||
| CDS-3UTR GCA 90 bp | TTTCTGAGGCCTCTTTGTAAACAACCGTCGGGGAGCAAGGGCGGGTGCTGGGGTGGTCAGGTCTGCTTCTaGCTCCTCCTCGGGGGCTTG | + |
|
Preference number: 4 (lower is better) Translates to: FLRPLCKQPSGSKGGCWGGQVCF*LLLGGL Trigger: CAAGCCCCCGAGGAGGAGGCAGAAGCAGACCTGACC...ACCCCAGCACCCGCCCTTGCTCCCCGACGGTTGTTTACAAAGAGGCCTCAGAAA 61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000089293.11 ENSMUST00000109615.8 |
||
| CDS-3UTR CCA 90 bp | GCACAAGTGTCCACACCAGAGGTTGAGGCACATCTTCACCCCAACCCAGGGAGGAGCCGCAGGTACTTGTaGGCTTTGCGCGCCTTGCGG | + |
|
Preference number: 4 (lower is better) Translates to: AQVSTPEVEAHLHPNPGRSRRYL*ALRALR Trigger: CCGCAAGGCGCGCAAAGCCCACAAGTACCTGCGGCT...CCTCCCTGGGTTGGGGTGAAGATGTGCCTCAACCTCTGGTGTGGACACTTGTGC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000089293.11 |
||
| CDS-3UTR TCA 90 bp | CCTGATTCATGTTCAACCCCCACAAGGTGGGAGGGGTCATCCATCCTTAGCCATTCCCGTCGATGGCTGTaGCTCTCCAGGTGGGGCCCG | + |
|
Preference number: 4 (lower is better) Translates to: PDSCSTPTRWEGSSILSHSRRWL*LSRWGP Trigger: CGGGCCCCACCTGGAGAGTCACAGCCATCGACGGGA...ATGGCTAAGGATGGATGACCCCTCCCACCTTGTGGGGGTTGAACATGAATCAGG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000089293.11 |
||
| CDS-3UTR GCA 90 bp | TTTCTGAGGCCTCTTTGTAAACAACCGTCGGGGAGCAAGGGCGGGTGCTGGGGTCGAGGGTCCAAGATGTaGTCCTCTGGCTCCCAGGTG | + |
|
Preference number: 4 (lower is better) Translates to: FLRPLCKQPSGSKGGCWGRGSKM*SSGSQV Trigger: CACCTGGGAGCCAGAGGAGCACATCTTGGACCCTCG...ACCCCAGCACCCGCCCTTGCTCCCCGACGGTTGTTTACAAAGAGGCCTCAGAAA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000089293.11 ENSMUST00000109615.8 |
||
| CDS-3UTR GCA 90 bp | TTTCTGAGGCCTCTTTGTAAACAACCGTCGGGGAGCAAGGGCGGGTGCTGGGGTTCCTCCTCGGGGGCTTaGTCCATAGGCTCCCAGTCT | + |
|
Preference number: 4 (lower is better) Translates to: FLRPLCKQPSGSKGGCWGSSSGA*SIGSQS Trigger: AGACTGGGAGCCTATGGAGCAAGCCCCCGAGGAGGA...ACCCCAGCACCCGCCCTTGCTCCCCGACGGTTGTTTACAAAGAGGCCTCAGAAA 60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000089293.11 ENSMUST00000109615.8 |
||
| CDS-3UTR GCA 90 bp | TTTCTGAGGCCTCTTTGTAAACAACCGTCGGGGAGCAAGGGCGGGTGCTGGGGTCCCATTGGTCAGGTCTaGTTCTGCCTCCTCCTCGGG | + |
|
Preference number: 4 (lower is better) Translates to: FLRPLCKQPSGSKGGCWGPIGQV*FCLLLG Trigger: CCCGAGGAGGAGGCAGAAGCAGACCTGACCAATGGG...ACCCCAGCACCCGCCCTTGCTCCCCGACGGTTGTTTACAAAGAGGCCTCAGAAA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000089293.11 ENSMUST00000109615.8 |
||
| CDS-3UTR CCA 90 bp | GTCCCACCACAAGGCTGGAGTGGAAAGTTCATAGTAAAGACCCACGGCAAGGGACACTTGAGGGGAGCGTaGGTGTCCAGGGAGGCGGCC | + |
|
Preference number: 4 (lower is better) Translates to: VPPQGWSGKFIVKTHGKGHLRGA*VSREAA Trigger: GGCCGCCTCCCTGGACACCCACGCTCCCCTCAAGTG...TCCCTTGCCGTGGGTCTTTACTATGAACTTTCCACTCCAGCCTTGTGGTGGGAC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000089293.11 ENSMUST00000109616.9 |
||
| 3UTR CAA 72 bp | CAGGTGGCTGTGAGCCTGTGTGGAAGCATCTGCACCTaGCACACCAAAGCCTGGTCCAATTGGCGGCTCGGA | + |
|
Preference number: 4 (lower is better) Translates to: QVAVSLCGSICT*HTKAWSNWRLG Trigger: TCCGAGCCGCCAATTGGACCAGGCTTTGGTGTGCAAGGTGCAGATGCTTCCACACAGGCTCACAGCCACCTG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000089293.11 ENSMUST00000109616.9 |
||
| CDS-3UTR TCA 90 bp | TTTCTGAGGCCTCTTTGTAAACAACCGTCGGGGAGCAAGGGCGGGTGCTGGGGTTCTCCTCGTAGGCCATaGCAAGGCGAGGGTCCAAGA | + |
|
Preference number: 4 (lower is better) Translates to: FLRPLCKQPSGSKGGCWGSPRRP*QGEGPR Trigger: TCTTGGACCCTCGCCTTGTCATGGCCTACGAGGAGA...ACCCCAGCACCCGCCCTTGCTCCCCGACGGTTGTTTACAAAGAGGCCTCAGAAA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000089293.11 ENSMUST00000109615.8 |
||
| CDS-3UTR GCA 90 bp | TTTCTGAGGCCTCTTTGTAAACAACCGTCGGGGAGCAAGGGCGGGTGCTGGGGTTCCACCGCAAACACCTaGTCGCCTATGGCTGACAGC | + |
|
Preference number: 4 (lower is better) Translates to: FLRPLCKQPSGSKGGCWGSTANT*SPMADS Trigger: GCTGTCAGCCATAGGCGAGCAGGTGTTTGCGGTGGA...ACCCCAGCACCCGCCCTTGCTCCCCGACGGTTGTTTACAAAGAGGCCTCAGAAA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000089293.11 ENSMUST00000109615.8 |
||
| CDS-3UTR GCA 90 bp | TTTCTGAGGCCTCTTTGTAAACAACCGTCGGGGAGCAAGGGCGGGTGCTGGGGTCGCGCTTCTTCCGGATaGTCTCCACCGCAAACACCT | + |
|
Preference number: 4 (lower is better) Translates to: FLRPLCKQPSGSKGGCWGRASSG*SPPQTP Trigger: AGGTGTTTGCGGTGGAGAGCATCCGGAAGAAGCGCG...ACCCCAGCACCCGCCCTTGCTCCCCGACGGTTGTTTACAAAGAGGCCTCAGAAA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000089293.11 ENSMUST00000109615.8 |
||
| CDS-3UTR GCA 90 bp | ACTGCCCTGAGAAAGTGGTGGGACACTCCCTCCCTGACTGCCCACATACCACTGAGCTCCGCAGGTCCATaGTGTACAGCCGCTGTAGCA | + |
|
Preference number: 4 (lower is better) Translates to: TALRKWWDTPSLTAHIPLSSAGP*CTAAVA Trigger: TGCTACAGCGGCTGTACAGCATGGACCTGCGGAGCT...CAGTGGTATGTGGGCAGTCAGGGAGGGAGTGTCCCACCACTTTCTCAGGGCAGT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000089293.11 |
||
| CDS-3UTR GCA 90 bp | TATAGCCACTCGAAGCCTTCTGCCATTCTCCCTAGGCGGCCAGTTTCCAGCAGTGGTACTTGTGGGCTTTaGGCGCCTTGCGGAGCGGGA | + |
|
Preference number: 4 (lower is better) Translates to: YSHSKPSAILPRRPVSSSGTCGL*APCGAG Trigger: TCCCGCTCCGCAAGGCGCGCAAAGCCCACAAGTACC...ACTGCTGGAAACTGGCCGCCTAGGGAGAATGGCAGAAGGCTTCGAGTGGCTATA 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000089293.11 |
||
| CDS-3UTR GCA 90 bp | CACTCGAAGCCTTCTGCCATTCTCCCTAGGCGGCCAGTTTCCAGCAGTTCAGAGCCCATTGGTCAGGTCTaGTTCTGCCTCCTCCTCGGG | + |
|
Preference number: 4 (lower is better) Translates to: HSKPSAILPRRPVSSSSEPIGQV*FCLLLG Trigger: CCCGAGGAGGAGGCAGAAGCAGACCTGACCAATGGG...CTCTGAACTGCTGGAAACTGGCCGCCTAGGGAGAATGGCAGAAGGCTTCGAGTG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000089293.11 ENSMUST00000109616.9 |
||
| CDS-3UTR CCA 90 bp | GGGAGGGAGCCGTCCTCAGGTAGGAAGCTGTCAGCCTATAGGGCACCTGTGCAACCCAGGTGCTATACTTaGGGGGCCATCCTTTCCACT | + |
|
Preference number: 4 (lower is better) Translates to: GREPSSGRKLSAYRAPVQPRCYT*GAILST Trigger: AGTGGAAAGGATGGCCCCCCAAGTATAGCACCTGGG...TTGCACAGGTGCCCTATAGGCTGACAGCTTCCTACCTGAGGACGGCTCCCTCCC 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000089293.11 ENSMUST00000109616.9 |
||
| CDS-3UTR CCA 90 bp | TTTCTGAGGCCTCTTTGTAAACAACCGTCGGGGAGCAAGGGCGGGTGCTGGGGTGTAGCAGAAGCCGCCTaGGTTTCGGACCTCTCTTCC | + |
|
Preference number: 4 (lower is better) Translates to: FLRPLCKQPSGSKGGCWGVAEAA*VSDLSS Trigger: GGAAGAGAGGTCCGAAACCCAGGCGGCTTCTGCTAC...ACCCCAGCACCCGCCCTTGCTCCCCGACGGTTGTTTACAAAGAGGCCTCAGAAA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000089293.11 ENSMUST00000109615.8 |
||
| CDS-3UTR CCA 90 bp | TTACCAGATGAGAACCACGTGGGCCAAATGGGCTCAACTGTGGCACTGCACAAGGCGGGAATGGCAGGGTaGGCACCAAGGGGCCCTTCT | + |
|
Preference number: 4 (lower is better) Translates to: LPDENHVGQMGSTVALHKAGMAG*APRGPS Trigger: AGAAGGGCCCCTTGGTGCCCACCCTGCCATTCCCGC...CTTGTGCAGTGCCACAGTTGAGCCCATTTGGCCCACGTGGTTCTCATCTGGTAA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000089293.11 |
||
| CDS-3UTR TCA 90 bp | ACCCAACCTCTACATTCAAATATGCAGGGGGAGGGGTTAAGAGATAGGCAGGTGAAGCCCTCGGCGGCTTaGGCCTCGCGGAAGGTGACG | + |
|
Preference number: 4 (lower is better) Translates to: TQPLHSNMQGEGLRDRQVKPSAA*ASRKVT Trigger: CGTCACCTTCCGCGAGGCTCAAGCCGCCGAGGGCTT...CACCTGCCTATCTCTTAACCCCTCCCCCTGCATATTTGAATGTAGAGGTTGGGT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000089293.11 ENSMUST00000109616.9 |
||
| CDS-3UTR GCA 90 bp | TATAGCCACTCGAAGCCTTCTGCCATTCTCCCTAGGCGGCCAGTTTCCAGCAGTCGAGGGTCCAAGATGTaGTCCTCTGGCTCCCAGGTG | + |
|
Preference number: 4 (lower is better) Translates to: YSHSKPSAILPRRPVSSSRGSKM*SSGSQV Trigger: CACCTGGGAGCCAGAGGAGCACATCTTGGACCCTCG...ACTGCTGGAAACTGGCCGCCTAGGGAGAATGGCAGAAGGCTTCGAGTGGCTATA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000089293.11 ENSMUST00000109616.9 |
||
| CDS-3UTR GCA 90 bp | AAGCTCGTAGCTCATTCTGTGTGCAAAGGAAGCGGTCTTGCGCAAAGACCTGGTGGGGCTGCTGACTCCTaGAGGGAGAGCTCCCGTCGA | + |
|
Preference number: 4 (lower is better) Translates to: KLVAHSVCKGSGLAQRPGGAADS*RESSRR Trigger: TCGACGGGAGCTCTCCCTGCAGGAGTCAGCAGCCCC...ACCAGGTCTTTGCGCAAGACCGCTTCCTTTGCACACAGAATGAGCTACGAGCTT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000089293.11 |
||
| CDS-3UTR GCA 90 bp | AATATGGTGGGCCATCAAACCCAGCAGCAAAGAAAAGCTCCAGCCACCCTCACCGGTCAGGTCTGCTTCTaGCTCCTCCTCGGGGGCTTG | + |
|
Preference number: 4 (lower is better) Translates to: NMVGHQTQQQRKAPATLTGQVCF*LLLGGL Trigger: CAAGCCCCCGAGGAGGAGGCAGAAGCAGACCTGACC...GGTGAGGGTGGCTGGAGCTTTTCTTTGCTGCTGGGTTTGATGGCCCACCATATT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000089293.11 ENSMUST00000109616.9 |
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| CDS-3UTR CCA 90 bp | TTTCTGAGGCCTCTTTGTAAACAACCGTCGGGGAGCAAGGGCGGGTGCTGGGGTCCCAGGTGCTATACTTaGGGGGCCATCCTTTCCACT | + |
|
Preference number: 4 (lower is better) Translates to: FLRPLCKQPSGSKGGCWGPRCYT*GAILST Trigger: AGTGGAAAGGATGGCCCCCCAAGTATAGCACCTGGG...ACCCCAGCACCCGCCCTTGCTCCCCGACGGTTGTTTACAAAGAGGCCTCAGAAA 58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000089293.11 ENSMUST00000109615.8 |
||
| CDS-3UTR CCA 90 bp | CACTCGAAGCCTTCTGCCATTCTCCCTAGGCGGCCAGTTTCCAGCAGTTCAGAGTTGCCCTTGGCTTTGTaGGAGCTCCGCAGGTCCATG | + |
|
Preference number: 4 (lower is better) Translates to: HSKPSAILPRRPVSSSSELPLAL*ELRRSM Trigger: CATGGACCTGCGGAGCTCCCACAAAGCCAAGGGCAA...CTCTGAACTGCTGGAAACTGGCCGCCTAGGGAGAATGGCAGAAGGCTTCGAGTG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000089293.11 |
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| CDS-3UTR CCA 90 bp | GCACAAGTGTCCACACCAGAGGTTGAGGCACATCTTCACCCCAACCCAGGGAGGGCTTCTCATTGCCCTTaGCTTTGTGGGAGCTCCGCA | + |
|
Preference number: 4 (lower is better) Translates to: AQVSTPEVEAHLHPNPGRASHCP*LCGSSA Trigger: TGCGGAGCTCCCACAAAGCCAAGGGCAATGAGAAGC...CCTCCCTGGGTTGGGGTGAAGATGTGCCTCAACCTCTGGTGTGGACACTTGTGC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000089293.11 |
||
| 3UTR CAA 72 bp | TCAACTGTGGCACTGCACAAGTGTCCACACCAGAGGTaGAGGCACATCTTCACCCCAACCCAGGGAGGGGGA | + |
|
Preference number: 4 (lower is better) Translates to: STVALHKCPHQR*RHIFTPTQGGG Trigger: TCCCCCTCCCTGGGTTGGGGTGAAGATGTGCCTCAACCTCTGGTGTGGACACTTGTGCAGTGCCACAGTTGA 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000089293.11 ENSMUST00000109616.9 |
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| CDS-3UTR GCA 90 bp | CTCTCCTCTCTCTGGCCCACCCAGACATCCTCTAGATTCAGGTCACCCACAGATTCCACCGCAAACACCTaGTCGCCTATGGCTGACAGC | + |
|
Preference number: 4 (lower is better) Translates to: LSSLWPTQTSSRFRSPTDSTANT*SPMADS Trigger: GCTGTCAGCCATAGGCGAGCAGGTGTTTGCGGTGGA...ATCTGTGGGTGACCTGAATCTAGAGGATGTCTGGGTGGGCCAGAGAGAGGAGAG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000089293.11 ENSMUST00000109616.9 |
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| CDS-3UTR GCA 90 bp | TATAGCCACTCGAAGCCTTCTGCCATTCTCCCTAGGCGGCCAGTTTCCAGCAGTTCCACCGCAAACACCTaGTCGCCTATGGCTGACAGC | + |
|
Preference number: 4 (lower is better) Translates to: YSHSKPSAILPRRPVSSSSTANT*SPMADS Trigger: GCTGTCAGCCATAGGCGAGCAGGTGTTTGCGGTGGA...ACTGCTGGAAACTGGCCGCCTAGGGAGAATGGCAGAAGGCTTCGAGTGGCTATA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000089293.11 ENSMUST00000109616.9 |
||
| CDS-3UTR GCA 90 bp | GCTGTGAGCCTGTGTGGAAGCATCTGCACCTTGCACACCAAAGCCTGGTCCAATCGCGCTTCTTCCGGATaGTCTCCACCGCAAACACCT | + |
|
Preference number: 4 (lower is better) Translates to: AVSLCGSICTLHTKAWSNRASSG*SPPQTP Trigger: AGGTGTTTGCGGTGGAGAGCATCCGGAAGAAGCGCG...ATTGGACCAGGCTTTGGTGTGCAAGGTGCAGATGCTTCCACACAGGCTCACAGC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000089293.11 ENSMUST00000109616.9 |
||
| CDS-3UTR GCA 90 bp | TATAGCCACTCGAAGCCTTCTGCCATTCTCCCTAGGCGGCCAGTTTCCAGCAGTGTGGCGGGAACTTCTTaGGTGAGAGCCGCAGGTACT | + |
|
Preference number: 4 (lower is better) Translates to: YSHSKPSAILPRRPVSSSVAGTS*VRAAGT Trigger: AGTACCTGCGGCTCTCACGCAAGAAGTTCCCGCCAC...ACTGCTGGAAACTGGCCGCCTAGGGAGAATGGCAGAAGGCTTCGAGTGGCTATA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000089293.11 |
||
| CDS-3UTR CCA 90 bp | CACTCGAAGCCTTCTGCCATTCTCCCTAGGCGGCCAGTTTCCAGCAGTTCAGAGCCCAGGTGCTATACTTaGGGGGCCATCCTTTCCACT | + |
|
Preference number: 4 (lower is better) Translates to: HSKPSAILPRRPVSSSSEPRCYT*GAILST Trigger: AGTGGAAAGGATGGCCCCCCAAGTATAGCACCTGGG...CTCTGAACTGCTGGAAACTGGCCGCCTAGGGAGAATGGCAGAAGGCTTCGAGTG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000089293.11 ENSMUST00000109616.9 |
||
| CDS-3UTR TCA 90 bp | CCTGATTCATGTTCAACCCCCACAAGGTGGGAGGGGTCATCCATCCTTAGCCATTCTCCTCGTAGGCCATaGCAAGGCGAGGGTCCAAGA | + |
|
Preference number: 4 (lower is better) Translates to: PDSCSTPTRWEGSSILSHSPRRP*QGEGPR Trigger: TCTTGGACCCTCGCCTTGTCATGGCCTACGAGGAGA...ATGGCTAAGGATGGATGACCCCTCCCACCTTGTGGGGGTTGAACATGAATCAGG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000089293.11 ENSMUST00000109616.9 |
||
| CDS-3UTR GCA 90 bp | ACTGCCCTGAGAAAGTGGTGGGACACTCCCTCCCTGACTGCCCACATACCACTGCCAGATATTCAACTTTaGCCTTCCGCACGCGCTTCT | + |
|
Preference number: 4 (lower is better) Translates to: TALRKWWDTPSLTAHIPLPDIQL*PSARAS Trigger: AGAAGCGCGTGCGGAAGGGCAAAGTTGAATATCTGG...CAGTGGTATGTGGGCAGTCAGGGAGGGAGTGTCCCACCACTTTCTCAGGGCAGT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000089293.11 ENSMUST00000109616.9 |
||
| CDS-3UTR GCA 90 bp | TTTCTGAGGCCTCTTTGTAAACAACCGTCGGGGAGCAAGGGCGGGTGCTGGGGTCCAGATATTCAACTTTaGCCTTCCGCACGCGCTTCT | + |
|
Preference number: 4 (lower is better) Translates to: FLRPLCKQPSGSKGGCWGPDIQL*PSARAS Trigger: AGAAGCGCGTGCGGAAGGGCAAAGTTGAATATCTGG...ACCCCAGCACCCGCCCTTGCTCCCCGACGGTTGTTTACAAAGAGGCCTCAGAAA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000089293.11 ENSMUST00000109615.8 |
||
| CDS-3UTR CCA 90 bp | GGGCCATCAAACCCAGCAGCAAAGAAAAGCTCCAGCCACCCTCACCTCTCTGGGCAAGATGTGCTCCTCTaGCTCCCAGGTGCTATACTT | + |
|
Preference number: 4 (lower is better) Translates to: GPSNPAAKKSSSHPHLSGQDVLL*LPGAIL Trigger: AAGTATAGCACCTGGGAGCCAGAGGAGCACATCTTG...CCCAGAGAGGTGAGGGTGGCTGGAGCTTTTCTTTGCTGCTGGGTTTGATGGCCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000089293.11 ENSMUST00000109616.9 |
||
| CDS-3UTR CCA 90 bp | TTTCTGAGGCCTCTTTGTAAACAACCGTCGGGGAGCAAGGGCGGGTGCTGGGGTCAAGATGTGCTCCTCTaGCTCCCAGGTGCTATACTT | + |
|
Preference number: 4 (lower is better) Translates to: FLRPLCKQPSGSKGGCWGQDVLL*LPGAIL Trigger: AAGTATAGCACCTGGGAGCCAGAGGAGCACATCTTG...ACCCCAGCACCCGCCCTTGCTCCCCGACGGTTGTTTACAAAGAGGCCTCAGAAA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000089293.11 ENSMUST00000109615.8 |
||
| CDS-3UTR CCA 90 bp | TTACCAGATGAGAACCACGTGGGCCAAATGGGCTCAACTGTGGCACTGCACAAGGTAGCAGAAGCCGCCTaGGTTTCGGACCTCTCTTCC | + |
|
Preference number: 4 (lower is better) Translates to: LPDENHVGQMGSTVALHKVAEAA*VSDLSS Trigger: GGAAGAGAGGTCCGAAACCCAGGCGGCTTCTGCTAC...CTTGTGCAGTGCCACAGTTGAGCCCATTTGGCCCACGTGGTTCTCATCTGGTAA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000089293.11 ENSMUST00000109616.9 |
||
| CDS-3UTR GCA 90 bp | CCTGTGTGGAAGCATCTGCACCTTGCACACCAAAGCCTGGTCCAATTGGCGGCTCCAGATATTCAACTTTaGCCTTCCGCACGCGCTTCT | + |
|
Preference number: 4 (lower is better) Translates to: PVWKHLHLAHQSLVQLAAPDIQL*PSARAS Trigger: AGAAGCGCGTGCGGAAGGGCAAAGTTGAATATCTGG...AGCCGCCAATTGGACCAGGCTTTGGTGTGCAAGGTGCAGATGCTTCCACACAGG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000089293.11 ENSMUST00000109616.9 |
||
| 3UTR CAA 72 bp | TGCAAGGCGGAGCAAGGGTGCCGCGGCAAGTTCTGTTaGTGCTGTGAATGGTGTCATGTTCAACTGGTCAGT | + |
|
Preference number: 4 (lower is better) Translates to: CKAEQGCRGKFC*CCEWCHVQLVS Trigger: ACTGACCAGTTGAACATGACACCATTCACAGCACAAACAGAACTTGCCGCGGCACCCTTGCTCCGCCTTGCA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000089293.11 ENSMUST00000109616.9 |
||
| CDS CCA 90 bp | GGCCCGCGTGGCGGGAACTTCTTGCGTGAGAGCCGCAGGTACTTGTaGGCTTTGCGCGCCTTGCGGAGCGGGAATGGCAGGGTGGGCACC | + |
|
Preference number: 5 (lower is better) Translates to: GPRGGNFLRESRRYL*ALRALRSGNGRVGT Trigger: GGTGCCCACCCTGCCATTCCCGCTCCGCAAGGCGCGCAAAGCCCACAAGTACCTGCGGCTCTCACGCAAGAAGTTCCCGCCACGCGGGCC 69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000089293.11 |
||
| CDS TCA 90 bp | GCTGTGACTCTCCAGGTGGGGCCCGCGTGGCGGGAACTTCTTGCGTaGGAGCCGCAGGTACTTGTGGGCTTTGCGCGCCTTGCGGAGCGG | + |
|
Preference number: 5 (lower is better) Translates to: AVTLQVGPAWRELLA*EPQVLVGFARLAER Trigger: CCGCTCCGCAAGGCGCGCAAAGCCCACAAGTACCTGCGGCTCTCACGCAAGAAGTTCCCGCCACGCGGGCCCCACCTGGAGAGTCACAGC 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000089293.11 |
||
| CDS CCA 90 bp | GAGCCGCAGGTACTTGTGGGCTTTGCGCGCCTTGCGGAGCGGGAATaGCAGGGTGGGCACCAAGGGGCCCTTCTCCACCAGCTCAGCGAC | + |
|
Preference number: 5 (lower is better) Translates to: EPQVLVGFARLAERE*QGGHQGALLHQLSD Trigger: GTCGCTGAGCTGGTGGAGAAGGGCCCCTTGGTGCCCACCCTGCCATTCCCGCTCCGCAAGGCGCGCAAAGCCCACAAGTACCTGCGGCTC 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000089293.11 |
||
| CDS GCA 90 bp | GTGGCGGGAACTTCTTGCGTGAGAGCCGCAGGTACTTGTGGGCTTTaGGCGCCTTGCGGAGCGGGAATGGCAGGGTGGGCACCAAGGGGC | + |
|
Preference number: 5 (lower is better) Translates to: VAGTSCVRAAGTCGL*APCGAGMAGWAPRG Trigger: GCCCCTTGGTGCCCACCCTGCCATTCCCGCTCCGCAAGGCGCGCAAAGCCCACAAGTACCTGCGGCTCTCACGCAAGAAGTTCCCGCCAC 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000089293.11 |
||
| CDS GCA 90 bp | GATGGCTGTGACTCTCCAGGTGGGGCCCGCGTGGCGGGAACTTCTTaGGTGAGAGCCGCAGGTACTTGTGGGCTTTGCGCGCCTTGCGGA | + |
|
Preference number: 5 (lower is better) Translates to: DGCDSPGGARVAGTS*VRAAGTCGLCAPCG Trigger: TCCGCAAGGCGCGCAAAGCCCACAAGTACCTGCGGCTCTCACGCAAGAAGTTCCCGCCACGCGGGCCCCACCTGGAGAGTCACAGCCATC 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000089293.11 |
||
| CDS TCA 90 bp | CATAGGCTCCCAGTCTCCGGGGGTCTGCACAACGTCTGGGGCTGCTaGCTCCTGCAGGGAGAGCTCCCGTCGATGGCTGTGACTCTCCAG | + |
|
Preference number: 5 (lower is better) Translates to: HRLPVSGGLHNVWGC*LLQGELPSMAVTLQ Trigger: CTGGAGAGTCACAGCCATCGACGGGAGCTCTCCCTGCAGGAGTCAGCAGCCCCAGACGTTGTGCAGACCCCCGGAGACTGGGAGCCTATG 64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000089293.11 ENSMUST00000128931.8 |
||
| CDS GCA 90 bp | TCCCGCTGCGGAGCGGGCGCGCCAGAGAGAAGCAGAGCTTCTCATTaGCCTTGGCTTTGTGGGAGCTCCGCAGGTCCATGCTGTACAGCC | + |
|
Preference number: 5 (lower is better) Translates to: SRCGAGAPERSRASH*PWLCGSSAGPCCTA Trigger: GGCTGTACAGCATGGACCTGCGGAGCTCCCACAAAGCCAAGGGCAATGAGAAGCTCTGCTTCTCTCTGGCGCGCCCGCTCCGCAGCGGGA 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000089293.11 ENSMUST00000177044.2 |
||
| CDS GCA 90 bp | ACTTCTTGCGTGAGAGCCGCAGGTACTTGTGGGCTTTGCGCGCCTTaGGGAGCGGGAATGGCAGGGTGGGCACCAAGGGGCCCTTCTCCA | + |
|
Preference number: 5 (lower is better) Translates to: TSCVRAAGTCGLCAP*GAGMAGWAPRGPSP Trigger: TGGAGAAGGGCCCCTTGGTGCCCACCCTGCCATTCCCGCTCCGCAAGGCGCGCAAAGCCCACAAGTACCTGCGGCTCTCACGCAAGAAGT 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000089293.11 |
||
| CDS GCA 90 bp | GATGGCTGTGACTCTCCAGGTGGGGCCCGCGTGGCGGGAACTTCTTaGGTGAGAGCCGCAGGTACTTGTGGGCTTTGCGCGCCTGTAGCA | + |
|
Preference number: 5 (lower is better) Translates to: DGCDSPGGARVAGTS*VRAAGTCGLCAPVA Trigger: TGCTACAGGCGCGCAAAGCCCACAAGTACCTGCGGCTCTCACGCAAGAAGTTCCCGCCACGCGGGCCCCACCTGGAGAGTCACAGCCATC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000128931.8 |
||
| CDS-3UTR CAA 90 bp | GCACAAGTGTCCACACCAGAGGTTGAGGCACATCTTCACCCCAACCCAGGGAGGTGGGCTTTGCGCGCCTaGCGGAGCGGGAATGGCAGG | + |
|
Preference number: 5 (lower is better) Translates to: AQVSTPEVEAHLHPNPGRWALRA*RSGNGR Trigger: CCTGCCATTCCCGCTCCGCAAGGCGCGCAAAGCCCA...CCTCCCTGGGTTGGGGTGAAGATGTGCCTCAACCTCTGGTGTGGACACTTGTGC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000089293.11 |
||
| CDS-3UTR CAA 90 bp | TCCACACCAGAGGTTGAGGCACATCTTCACCCCAACCCAGGGAGGGGGAAGTTCGAAGCCCTCGGCGGCTaGAGCCTCGCGGAAGGTGAC | + |
|
Preference number: 5 (lower is better) Translates to: STPEVEAHLHPNPGRGKFEALGG*SLAEGD Trigger: GTCACCTTCCGCGAGGCTCAAGCCGCCGAGGGCTTC...GAACTTCCCCCTCCCTGGGTTGGGGTGAAGATGTGCCTCAACCTCTGGTGTGGA 63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000089293.11 ENSMUST00000109616.9 |
||
| CDS-3UTR CAA 90 bp | TTTCTGAGGCCTCTTTGTAAACAACCGTCGGGGAGCAAGGGCGGGTGCTGGGGTGAAGCCCTCGGCGGCTaGAGCCTCGCGGAAGGTGAC | + |
|
Preference number: 5 (lower is better) Translates to: FLRPLCKQPSGSKGGCWGEALGG*SLAEGD Trigger: GTCACCTTCCGCGAGGCTCAAGCCGCCGAGGGCTTC...ACCCCAGCACCCGCCCTTGCTCCCCGACGGTTGTTTACAAAGAGGCCTCAGAAA 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000089293.11 ENSMUST00000109615.8 |
||
| CDS TCA 90 bp | GACGGTGACGGAGTTGGCGGTGATGTCAGTCACGGTAACTTCACTTaGGGGGAGCGTGGGTGTCCAGGGAGGCGGCCCATTGGTCAGGTC | + |
|
Preference number: 5 (lower is better) Translates to: DGDGVGGDVSHGNFT*GERGCPGRRPIGQV Trigger: GACCTGACCAATGGGCCGCCTCCCTGGACACCCACGCTCCCCTCAAGTGAAGTTACCGTGACTGACATCACCGCCAACTCCGTCACCGTC 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000089293.11 ENSMUST00000109615.8 ENSMUST00000109616.9 ENSMUST00000146719.9 |
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| CDS CCA 90 bp | TGCGGAGCGGGCGCGCCAGAGAGAAGCAGAGCTTCTCATTGCCCTTaGCTTTGTGGGAGCTCCGCAGGTCCATGCTGTACAGCCGCTGTA | + |
|
Preference number: 5 (lower is better) Translates to: CGAGAPERSRASHCP*LCGSSAGPCCTAAV Trigger: TACAGCGGCTGTACAGCATGGACCTGCGGAGCTCCCACAAAGCCAAGGGCAATGAGAAGCTCTGCTTCTCTCTGGCGCGCCCGCTCCGCA 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000089293.11 ENSMUST00000177044.2 |
||
| CDS CCA 90 bp | GCCGCAGGTACTTGTGGGCTTTGCGCGCCTGTAGCAGAAGCCGCCTaGGTTTCGGACCTCTCTTCCTATACCCCGAGGCTCGGTCTCTCT | + |
|
Preference number: 5 (lower is better) Translates to: AAGTCGLCAPVAEAA*VSDLSSYTPRLGLS Trigger: AGAGAGACCGAGCCTCGGGGTATAGGAAGAGAGGTCCGAAACCCAGGCGGCTTCTGCTACAGGCGCGCAAAGCCCACAAGTACCTGCGGC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000128931.8 |
||
| CDS-3UTR CAA 90 bp | GGGAGCTGGGGCTTCAAGAACACCAAGGTCTCCCCACCTCCAGGTTCCTGTAGCGAGAGCCGCAGGTACTaGTGGGCTTTGCGCGCCTTG | + |
|
Preference number: 5 (lower is better) Translates to: GSWGFKNTKVSPPPGSCSESRRY*WALRAL Trigger: CAAGGCGCGCAAAGCCCACAAGTACCTGCGGCTCTC...GCTACAGGAACCTGGAGGTGGGGAGACCTTGGTGTTCTTGAAGCCCCAGCTCCC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000089293.11 |
||
| CDS-3UTR CAA 90 bp | CACTCGAAGCCTTCTGCCATTCTCCCTAGGCGGCCAGTTTCCAGCAGTTCAGAGGAAGCCCTCGGCGGCTaGAGCCTCGCGGAAGGTGAC | + |
|
Preference number: 5 (lower is better) Translates to: HSKPSAILPRRPVSSSSEEALGG*SLAEGD Trigger: GTCACCTTCCGCGAGGCTCAAGCCGCCGAGGGCTTC...CTCTGAACTGCTGGAAACTGGCCGCCTAGGGAGAATGGCAGAAGGCTTCGAGTG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000089293.11 ENSMUST00000109616.9 |
||
| CDS-3UTR CAA 90 bp | CCTGTGTGGAAGCATCTGCACCTTGCACACCAAAGCCTGGTCCAATTGGCGGCTAGGTACTTGTGGGCTTaGCGCGCCTTGCGGAGCGGG | + |
|
Preference number: 5 (lower is better) Translates to: PVWKHLHLAHQSLVQLAARYLWA*RALRSG Trigger: CCCGCTCCGCAAGGCGCGCAAAGCCCACAAGTACCT...AGCCGCCAATTGGACCAGGCTTTGGTGTGCAAGGTGCAGATGCTTCCACACAGG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000089293.11 |
||
| CDS CCA 90 bp | TCTGCACAACGTCTGGGGCTGCTGACTCCTGTAGCAGAAGCCGCCTaGGTTTCGGACCTCTCTTCCTATACCCCGAGGCTCGGTCTCTCT | + |
|
Preference number: 5 (lower is better) Translates to: SAQRLGLLTPVAEAA*VSDLSSYTPRLGLS Trigger: AGAGAGACCGAGCCTCGGGGTATAGGAAGAGAGGTCCGAAACCCAGGCGGCTTCTGCTACAGGAGTCAGCAGCCCCAGACGTTGTGCAGA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000109615.8 ENSMUST00000109616.9 ENSMUST00000132821.8 ENSMUST00000146719.9 |
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| CDS-3UTR CAA 90 bp | TTTCTGAGGCCTCTTTGTAAACAACCGTCGGGGAGCAAGGGCGGGTGCTGGGGTGTGACGGTGACGGAGTaGGCGGTGATGTCAGTCACG | + |
|
Preference number: 5 (lower is better) Translates to: FLRPLCKQPSGSKGGCWGVTVTE*AVMSVT Trigger: CGTGACTGACATCACCGCCAACTCCGTCACCGTCAC...ACCCCAGCACCCGCCCTTGCTCCCCGACGGTTGTTTACAAAGAGGCCTCAGAAA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000089293.11 ENSMUST00000109615.8 |
||
| CDS-3UTR CAA 90 bp | AATGGCAGGGAGACAGCACACTCGGAGGAGGCTTGGTGGGCAGCCTCTTCCCTGACCAGATATTCAACTTaGCCCTTCCGCACGCGCTTC | + |
|
Preference number: 5 (lower is better) Translates to: NGRETAHSEEAWWAASSLTRYST*PFRTRF Trigger: GAAGCGCGTGCGGAAGGGCAAAGTTGAATATCTGGT...CAGGGAAGAGGCTGCCCACCAAGCCTCCTCCGAGTGTGCTGTCTCCCTGCCATT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000089293.11 ENSMUST00000109616.9 |
||
| CDS-3UTR CAA 90 bp | CCCCCAATATGGTGGGCCATCAAACCCAGCAGCAAAGAAAAGCTCCAGCCACCCAGCTTCTCATTGCCCTaGGCTTTGTGGGAGCTCCGC | + |
|
Preference number: 5 (lower is better) Translates to: PPIWWAIKPSSKEKLQPPSFSLP*ALWELR Trigger: GCGGAGCTCCCACAAAGCCAAGGGCAATGAGAAGCT...GGGTGGCTGGAGCTTTTCTTTGCTGCTGGGTTTGATGGCCCACCATATTGGGGG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000089293.11 |
||
| CDS-3UTR CAA 90 bp | AATATGGTGGGCCATCAAACCCAGCAGCAAAGAAAAGCTCCAGCCACCCTCACCCGTGGCGGGAACTTCTaGCGTGAGAGCCGCAGGTAC | + |
|
Preference number: 5 (lower is better) Translates to: NMVGHQTQQQRKAPATLTRGGNF*RESRRY Trigger: GTACCTGCGGCTCTCACGCAAGAAGTTCCCGCCACG...GGTGAGGGTGGCTGGAGCTTTTCTTTGCTGCTGGGTTTGATGGCCCACCATATT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000089293.11 |
||
| CDS-3UTR CAA 90 bp | ATGGTGGGCCATCAAACCCAGCAGCAAAGAAAAGCTCCAGCCACCCTCACCTCTGTGACGGTGACGGAGTaGGCGGTGATGTCAGTCACG | + |
|
Preference number: 5 (lower is better) Translates to: MVGHQTQQQRKAPATLTSVTVTE*AVMSVT Trigger: CGTGACTGACATCACCGCCAACTCCGTCACCGTCAC...AGAGGTGAGGGTGGCTGGAGCTTTTCTTTGCTGCTGGGTTTGATGGCCCACCAT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000089293.11 ENSMUST00000109616.9 |
||
| CDS GCA 90 bp | TCACCAGATATTCAACTTTGCCCTTCCGCACGCGCTTCTTCCGGATaGTCTCCACCGCAAACACCTGCTCGCCTATGGCTGACAGCTCCA | + |
|
Preference number: 5 (lower is better) Translates to: SPDIQLCPSARASSG*SPPQTPARLWLTAP Trigger: TGGAGCTGTCAGCCATAGGCGAGCAGGTGTTTGCGGTGGAGAGCATCCGGAAGAAGCGCGTGCGGAAGGGCAAAGTTGAATATCTGGTGA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000089293.11 ENSMUST00000109615.8 ENSMUST00000109616.9 ENSMUST00000177044.2 |
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| CDS-3UTR CAA 90 bp | TTTCTGAGGCCTCTTTGTAAACAACCGTCGGGGAGCAAGGGCGGGTGCTGGGGTACCAGATATTCAACTTaGCCCTTCCGCACGCGCTTC | + |
|
Preference number: 5 (lower is better) Translates to: FLRPLCKQPSGSKGGCWGTRYST*PFRTRF Trigger: GAAGCGCGTGCGGAAGGGCAAAGTTGAATATCTGGT...ACCCCAGCACCCGCCCTTGCTCCCCGACGGTTGTTTACAAAGAGGCCTCAGAAA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000089293.11 ENSMUST00000109615.8 |
||
| CDS-3UTR CAA 90 bp | CCTGATTCATGTTCAACCCCCACAAGGTGGGAGGGGTCATCCATCCTTAGCCATGTGACGGTGACGGAGTaGGCGGTGATGTCAGTCACG | + |
|
Preference number: 5 (lower is better) Translates to: PDSCSTPTRWEGSSILSHVTVTE*AVMSVT Trigger: CGTGACTGACATCACCGCCAACTCCGTCACCGTCAC...ATGGCTAAGGATGGATGACCCCTCCCACCTTGTGGGGGTTGAACATGAATCAGG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000089293.11 ENSMUST00000109616.9 |
||
| CDS-3UTR CAA 90 bp | GTCCCACCACAAGGCTGGAGTGGAAAGTTCATAGTAAAGACCCACGGCAAGGGAACCAGATATTCAACTTaGCCCTTCCGCACGCGCTTC | + |
|
Preference number: 5 (lower is better) Translates to: VPPQGWSGKFIVKTHGKGTRYST*PFRTRF Trigger: GAAGCGCGTGCGGAAGGGCAAAGTTGAATATCTGGT...TCCCTTGCCGTGGGTCTTTACTATGAACTTTCCACTCCAGCCTTGTGGTGGGAC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000089293.11 ENSMUST00000109616.9 |
||
| CDS-3UTR CAA 90 bp | CCAATACATTCAGGTCGTCTGAACAAAGCTCGTAGCTCATTCTGTGTGCAAAGGTCATTGCCCTTGGCTTaGTGGGAGCTCCGCAGGTCC | + |
|
Preference number: 5 (lower is better) Translates to: PIHSGRLNKARSSFCVQRSLPLA*WELRRS Trigger: GGACCTGCGGAGCTCCCACAAAGCCAAGGGCAATGA...CCTTTGCACACAGAATGAGCTACGAGCTTTGTTCAGACGACCTGAATGTATTGG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000089293.11 |
||
| CDS CAA 90 bp | TGGGGCCCGCGTGGCGGGAACTTCTTGCGTGAGAGCCGCAGGTACTaGTGGGCTTTGCGCGCCTTGCGGAGCGGGAATGGCAGGGTGGGC | + |
|
Preference number: 6 (lower is better) Translates to: WGPRGGNFLRESRRY*WALRALRSGNGRVG Trigger: GCCCACCCTGCCATTCCCGCTCCGCAAGGCGCGCAAAGCCCACAAGTACCTGCGGCTCTCACGCAAGAAGTTCCCGCCACGCGGGCCCCA 69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000089293.11 |
||
| CDS TCA 72 bp | GCTGACTCCTGCAGGGAGAGCTCCCGTCGATGGCTGTaGCTCTCCAGGTGGGGCCCGCGTGGCGGGAACTTC | + |
|
Preference number: 6 (lower is better) Translates to: ADSCRESSRRWL*LSRWGPRGGNF Trigger: GAAGTTCCCGCCACGCGGGCCCCACCTGGAGAGTCACAGCCATCGACGGGAGCTCTCCCTGCAGGAGTCAGC 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000089293.11 ENSMUST00000128931.8 |
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| CDS GCA 72 bp | GTGAGAGCCGCAGGTACTTGTGGGCTTTGCGCGCCTTaGGGAGCGGGAATGGCAGGGTGGGCACCAAGGGGC | + |
|
Preference number: 6 (lower is better) Translates to: VRAAGTCGLCAP*GAGMAGWAPRG Trigger: GCCCCTTGGTGCCCACCCTGCCATTCCCGCTCCGCAAGGCGCGCAAAGCCCACAAGTACCTGCGGCTCTCAC 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000089293.11 |
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| CDS CAA 72 bp | CGTGAGAGCCGCAGGTACTTGTGGGCTTTGCGCGCCTaGCGGAGCGGGAATGGCAGGGTGGGCACCAAGGGG | + |
|
Preference number: 6 (lower is better) Translates to: RESRRYLWALRA*RSGNGRVGTKG Trigger: CCCCTTGGTGCCCACCCTGCCATTCCCGCTCCGCAAGGCGCGCAAAGCCCACAAGTACCTGCGGCTCTCACG 68% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000089293.11 |
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| CDS CAA 90 bp | CGTGGCGGGAACTTCTTGCGTGAGAGCCGCAGGTACTTGTGGGCTTaGCGCGCCTTGCGGAGCGGGAATGGCAGGGTGGGCACCAAGGGG | + |
|
Preference number: 6 (lower is better) Translates to: RGGNFLRESRRYLWA*RALRSGNGRVGTKG Trigger: CCCCTTGGTGCCCACCCTGCCATTCCCGCTCCGCAAGGCGCGCAAAGCCCACAAGTACCTGCGGCTCTCACGCAAGAAGTTCCCGCCACG 67% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000089293.11 |
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| CDS TCA 72 bp | CCAGTCTCCGGGGGTCTGCACAACGTCTGGGGCTGCTaGCTCCTGCAGGGAGAGCTCCCGTCGATGGCTGTG | + |
|
Preference number: 6 (lower is better) Translates to: PVSGGLHNVWGC*LLQGELPSMAV Trigger: CACAGCCATCGACGGGAGCTCTCCCTGCAGGAGTCAGCAGCCCCAGACGTTGTGCAGACCCCCGGAGACTGG 67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000089293.11 ENSMUST00000128931.8 |
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| CDS GCA 72 bp | GACTCTCCAGGTGGGGCCCGCGTGGCGGGAACTTCTTaGGTGAGAGCCGCAGGTACTTGTGGGCTTTGCGCG | + |
|
Preference number: 6 (lower is better) Translates to: DSPGGARVAGTS*VRAAGTCGLCA Trigger: CGCGCAAAGCCCACAAGTACCTGCGGCTCTCACGCAAGAAGTTCCCGCCACGCGGGCCCCACCTGGAGAGTC 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000089293.11 ENSMUST00000128931.8 |
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| CDS GCA 72 bp | CGTGGGTGTCCAGGGAGGCGGCCCATTGGTCAGGTCTaGTTCTGCCTCCTCCTCGGGGGCTTGCTCCATAGG | + |
|
Preference number: 6 (lower is better) Translates to: RGCPGRRPIGQV*FCLLLGGLLHR Trigger: CCTATGGAGCAAGCCCCCGAGGAGGAGGCAGAAGCAGACCTGACCAATGGGCCGCCTCCCTGGACACCCACG 67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 5 transcripts: ENSMUST00000089293.11 ENSMUST00000109615.8 ENSMUST00000109616.9 ENSMUST00000128931.8 ENSMUST00000146719.9 |
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| CDS CCA 72 bp | TTGAGGGGAGCGTGGGTGTCCAGGGAGGCGGCCCATTaGTCAGGTCTGCTTCTGCCTCCTCCTCGGGGGCTT | + |
|
Preference number: 6 (lower is better) Translates to: LRGAWVSREAAH*SGLLLPPPRGL Trigger: AAGCCCCCGAGGAGGAGGCAGAAGCAGACCTGACCAATGGGCCGCCTCCCTGGACACCCACGCTCCCCTCAA 67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 5 transcripts: ENSMUST00000089293.11 ENSMUST00000109615.8 ENSMUST00000109616.9 ENSMUST00000128931.8 ENSMUST00000146719.9 |
||
| CDS CAA 90 bp | AGGCGGCCCATTGGTCAGGTCTGCTTCTGCCTCCTCCTCGGGGGCTaGCTCCATAGGCTCCCAGTCTCCGGGGGTCTGCACAACGTCTGG | + |
|
Preference number: 6 (lower is better) Translates to: RRPIGQVCFCLLLGG*LHRLPVSGGLHNVW Trigger: CCAGACGTTGTGCAGACCCCCGGAGACTGGGAGCCTATGGAGCAAGCCCCCGAGGAGGAGGCAGAAGCAGACCTGACCAATGGGCCGCCT 66% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 5 transcripts: ENSMUST00000089293.11 ENSMUST00000109615.8 ENSMUST00000109616.9 ENSMUST00000128931.8 ENSMUST00000146719.9 |
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| CDS TCA 72 bp | TTCTCGTTGCGGTCTCGGAAGAAGCCCTCGGCGGCTTaGGCCTCGCGGAAGGTGACGGTGACGGAGTTGGCG | + |
|
Preference number: 6 (lower is better) Translates to: FSLRSRKKPSAA*ASRKVTVTELA Trigger: CGCCAACTCCGTCACCGTCACCTTCCGCGAGGCTCAAGCCGCCGAGGGCTTCTTCCGAGACCGCAACGAGAA 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000089293.11 ENSMUST00000109615.8 ENSMUST00000109616.9 ENSMUST00000146719.9 |
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| CDS CCA 72 bp | GGCGGGAACTTCTTGCGTGAGAGCCGCAGGTACTTGTaGGCTTTGCGCGCCTTGCGGAGCGGGAATGGCAGG | + |
|
Preference number: 6 (lower is better) Translates to: GGNFLRESRRYL*ALRALRSGNGR Trigger: CCTGCCATTCCCGCTCCGCAAGGCGCGCAAAGCCCACAAGTACCTGCGGCTCTCACGCAAGAAGTTCCCGCC 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000089293.11 |
||
| CDS CAA 72 bp | CTTCTCGTTGCGGTCTCGGAAGAAGCCCTCGGCGGCTaGAGCCTCGCGGAAGGTGACGGTGACGGAGTTGGC | + |
|
Preference number: 6 (lower is better) Translates to: LLVAVSEEALGG*SLAEGDGDGVG Trigger: GCCAACTCCGTCACCGTCACCTTCCGCGAGGCTCAAGCCGCCGAGGGCTTCTTCCGAGACCGCAACGAGAAG 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000089293.11 ENSMUST00000109615.8 ENSMUST00000109616.9 ENSMUST00000146719.9 |
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| CDS CAA 90 bp | AACTTCTTGCGTGAGAGCCGCAGGTACTTGTGGGCTTTGCGCGCCTaGCGGAGCGGGAATGGCAGGGTGGGCACCAAGGGGCCCTTCTCC | + |
|
Preference number: 6 (lower is better) Translates to: NFLRESRRYLWALRA*RSGNGRVGTKGPFS Trigger: GGAGAAGGGCCCCTTGGTGCCCACCCTGCCATTCCCGCTCCGCAAGGCGCGCAAAGCCCACAAGTACCTGCGGCTCTCACGCAAGAAGTT 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000089293.11 |
||
| CDS GCA 72 bp | ACTTCTTGCGTGAGAGCCGCAGGTACTTGTGGGCTTTaGGCGCCTTGCGGAGCGGGAATGGCAGGGTGGGCA | + |
|
Preference number: 6 (lower is better) Translates to: TSCVRAAGTCGL*APCGAGMAGWA Trigger: TGCCCACCCTGCCATTCCCGCTCCGCAAGGCGCGCAAAGCCCACAAGTACCTGCGGCTCTCACGCAAGAAGT 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000089293.11 |
||
| CDS GCA 72 bp | TTGGTCAGGTCTGCTTCTGCCTCCTCCTCGGGGGCTTaGTCCATAGGCTCCCAGTCTCCGGGGGTCTGCACA | + |
|
Preference number: 6 (lower is better) Translates to: LVRSASASSSGA*SIGSQSPGVCT Trigger: TGTGCAGACCCCCGGAGACTGGGAGCCTATGGAGCAAGCCCCCGAGGAGGAGGCAGAAGCAGACCTGACCAA 64% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 6 transcripts: ENSMUST00000089293.11 ENSMUST00000109615.8 ENSMUST00000109616.9 ENSMUST00000128931.8 ENSMUST00000132821.8 ENSMUST00000146719.9 |
||
| CDS CCA 72 bp | GGCGGGAACTTCTTGCGTGAGAGCCGCAGGTACTTGTaGGCTTTGCGCGCCTGTAGCAGAAGCCGCCTGGGT | + |
|
Preference number: 6 (lower is better) Translates to: GGNFLRESRRYL*ALRACSRSRLG Trigger: ACCCAGGCGGCTTCTGCTACAGGCGCGCAAAGCCCACAAGTACCTGCGGCTCTCACGCAAGAAGTTCCCGCC 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000128931.8 |
||
| CDS CAA 72 bp | AACTTCTTGCGTGAGAGCCGCAGGTACTTGTGGGCTTaGCGCGCCTTGCGGAGCGGGAATGGCAGGGTGGGC | + |
|
Preference number: 6 (lower is better) Translates to: NFLRESRRYLWA*RALRSGNGRVG Trigger: GCCCACCCTGCCATTCCCGCTCCGCAAGGCGCGCAAAGCCCACAAGTACCTGCGGCTCTCACGCAAGAAGTT 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000089293.11 |
||
| CDS CAA 90 bp | GTAACTTCACTTGAGGGGAGCGTGGGTGTCCAGGGAGGCGGCCCATaGGTCAGGTCTGCTTCTGCCTCCTCCTCGGGGGCTTGCTCCATA | + |
|
Preference number: 6 (lower is better) Translates to: VTSLEGSVGVQGGGP*VRSASASSSGACSI Trigger: TATGGAGCAAGCCCCCGAGGAGGAGGCAGAAGCAGACCTGACCAATGGGCCGCCTCCCTGGACACCCACGCTCCCCTCAAGTGAAGTTAC 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000089293.11 ENSMUST00000109615.8 ENSMUST00000109616.9 ENSMUST00000146719.9 |
||
| CDS CCA 72 bp | CGTCTGGGGCTGCTGACTCCTGTAGCAGAAGCCGCCTaGGTTTCGGACCTCTCTTCCTATACCCCGAGGCTC | + |
|
Preference number: 6 (lower is better) Translates to: RLGLLTPVAEAA*VSDLSSYTPRL Trigger: GAGCCTCGGGGTATAGGAAGAGAGGTCCGAAACCCAGGCGGCTTCTGCTACAGGAGTCAGCAGCCCCAGACG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000109615.8 ENSMUST00000109616.9 ENSMUST00000132821.8 ENSMUST00000146719.9 |
||
| CDS CAA 90 bp | AGCGGGCGCGCCAGAGAGAAGCAGAGCTTCTCATTGCCCTTGGCTTaGTGGGAGCTCCGCAGGTCCATGCTGTACAGCCGCTGTAGCAGA | + |
|
Preference number: 6 (lower is better) Translates to: SGRAREKQSFSLPLA*WELRRSMLYSRCSR Trigger: TCTGCTACAGCGGCTGTACAGCATGGACCTGCGGAGCTCCCACAAAGCCAAGGGCAATGAGAAGCTCTGCTTCTCTCTGGCGCGCCCGCT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000089293.11 ENSMUST00000177044.2 |
||
| CDS TCA 72 bp | GGAGTTGGCGGTGATGTCAGTCACGGTAACTTCACTTaGGGGGAGCGTGGGTGTCCAGGGAGGCGGCCCATT | + |
|
Preference number: 6 (lower is better) Translates to: GVGGDVSHGNFT*GERGCPGRRPI Trigger: AATGGGCCGCCTCCCTGGACACCCACGCTCCCCTCAAGTGAAGTTACCGTGACTGACATCACCGCCAACTCC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000089293.11 ENSMUST00000109615.8 ENSMUST00000109616.9 ENSMUST00000146719.9 |
||
| CDS GCA 72 bp | CATTGCCCTTGGCTTTGTGGGAGCTCCGCAGGTCCATaGTGTACAGCCGCTGTAGCAGAAGCCGCCTGGGTT | + |
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Preference number: 6 (lower is better) Translates to: HCPWLCGSSAGP*CTAAVAEAAWV Trigger: AACCCAGGCGGCTTCTGCTACAGCGGCTGTACAGCATGGACCTGCGGAGCTCCCACAAAGCCAAGGGCAATG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000089293.11 ENSMUST00000177044.2 |
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| CDS CCA 72 bp | GGTCCATGCTGTACAGCCGCTGTAGCAGAAGCCGCCTaGGTTTCGGACCTCTCTTCCTATACCCCGAGGCTC | + |
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Preference number: 6 (lower is better) Translates to: GPCCTAAVAEAA*VSDLSSYTPRL Trigger: GAGCCTCGGGGTATAGGAAGAGAGGTCCGAAACCCAGGCGGCTTCTGCTACAGCGGCTGTACAGCATGGACC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000089293.11 ENSMUST00000177044.2 |
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| CDS CCA 72 bp | ACTTGTGGGCTTTGCGCGCCTGTAGCAGAAGCCGCCTaGGTTTCGGACCTCTCTTCCTATACCCCGAGGCTC | + |
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Preference number: 6 (lower is better) Translates to: TCGLCAPVAEAA*VSDLSSYTPRL Trigger: GAGCCTCGGGGTATAGGAAGAGAGGTCCGAAACCCAGGCGGCTTCTGCTACAGGCGCGCAAAGCCCACAAGT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000128931.8 |
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| CDS GCA 72 bp | ATTCAACTTTGCCCTTCCGCACGCGCTTCTTCCGGATaGTCTCCACCGCAAACACCTGCTCGCCTATGGCTG | + |
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Preference number: 6 (lower is better) Translates to: IQLCPSARASSG*SPPQTPARLWL Trigger: CAGCCATAGGCGAGCAGGTGTTTGCGGTGGAGAGCATCCGGAAGAAGCGCGTGCGGAAGGGCAAAGTTGAAT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000089293.11 ENSMUST00000109615.8 ENSMUST00000109616.9 ENSMUST00000177044.2 |
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