Pregenerated sensors for CBX6 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000089715Ensembl transcript IDs: ENSMUST00000109623.8, ENSMUST00000109625.8, ENSMUST00000109627.8, ENSMUST00000148358.2
Found 230 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | TGTAGCGCCTGGTCCGCAGCACCAGTGACATCAGGAGGCACCCGCTaGCCGGTGGCAGCCGCCTCAGGAGGGATGGACAGATCGAGCACC | + |
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Preference number: 1 (lower is better) Translates to: CSAWSAAPVTSGGTR*PVAAASGGMDRSST Trigger: GGTGCTCGATCTGTCCATCCCTCCTGAGGCGGCTGCCACCGGCCAGCGGGTGCCTCCTGATGTCACTGGTGCTGCGGACCAGGCGCTACA 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000109623.8 |
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| 3UTR TCA 90 bp | GCCGGTGGCAGCCGCCTCAGGAGGGATGGACAGATCGAGCACCTCTaGCTCTCGCCAGTTGGGCACAGATCGGCTCAGGGTCTCCGGGAG | + |
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Preference number: 1 (lower is better) Translates to: AGGSRLRRDGQIEHL*LSPVGHRSAQGLRE Trigger: CTCCCGGAGACCCTGAGCCGATCTGTGCCCAACTGGCGAGAGTCAGAGGTGCTCGATCTGTCCATCCCTCCTGAGGCGGCTGCCACCGGC 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000109623.8 |
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| 3UTR TCA 90 bp | GGAGGGACCCATTTTGGCCTCATCCTTCACTCAGTGCCAGGGTGGTaGGAGCCTGTGCCCACCCTAGGCGGGATCTCCTGGGGGCCCTGC | + |
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Preference number: 1 (lower is better) Translates to: GGTHFGLILHSVPGW*EPVPTLGGISWGPC Trigger: GCAGGGCCCCCAGGAGATCCCGCCTAGGGTGGGCACAGGCTCTCACCACCCTGGCACTGAGTGAAGGATGAGGCCAAAATGGGTCCCTCC 66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000109625.8 ENSMUST00000109627.8 |
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| 3UTR CCA 90 bp | CATCAGGAGGCACCCGCTGGCCGGTGGCAGCCGCCTCAGGAGGGATaGACAGATCGAGCACCTCTGACTCTCGCCAGTTGGGCACAGATC | + |
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Preference number: 1 (lower is better) Translates to: HQEAPAGRWQPPQEG*TDRAPLTLASWAQI Trigger: GATCTGTGCCCAACTGGCGAGAGTCAGAGGTGCTCGATCTGTCCATCCCTCCTGAGGCGGCTGCCACCGGCCAGCGGGTGCCTCCTGATG 66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000109623.8 |
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| 3UTR TCA 90 bp | AGCCAGCTCAGGCCACATACAGGAACACTCTGGTCAACGCCCAGGTaGATCCCAGGCAGTGGCCAAGGGCAGGCCAGTGCCGCCTGGGGA | + |
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Preference number: 1 (lower is better) Translates to: SQLRPHTGTLWSTPR*IPGSGQGQASAAWG Trigger: TCCCCAGGCGGCACTGGCCTGCCCTTGGCCACTGCCTGGGATTCACCTGGGCGTTGACCAGAGTGTTCCTGTATGTGGCCTGAGCTGGCT 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000109625.8 ENSMUST00000109627.8 |
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| 3UTR GCA 90 bp | CAGAGTGGCCTGTGGCTTCCACGACAAACCGCACAGACTGGACTGTaGCAGGCCTGGCTAAGGCAAGGGAGGCCACGCCTTCAGCGACCC | + |
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Preference number: 1 (lower is better) Translates to: QSGLWLPRQTAQTGL*QAWLRQGRPRLQRP Trigger: GGGTCGCTGAAGGCGTGGCCTCCCTTGCCTTAGCCAGGCCTGGCACAGTCCAGTCTGTGCGGTTTGTCGTGGAAGCCACAGGCCACTCTG 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000109625.8 ENSMUST00000109627.8 |
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| 3UTR CCA 90 bp | GAGGTGGCTCCACGTCCCCCAGCAACCTGGGATCAGAGTGGCCTGTaGCTTCCACGACAAACCGCACAGACTGGACTGTGCCAGGCCTGG | + |
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Preference number: 1 (lower is better) Translates to: EVAPRPPATWDQSGL*LPRQTAQTGLCQAW Trigger: CCAGGCCTGGCACAGTCCAGTCTGTGCGGTTTGTCGTGGAAGCCACAGGCCACTCTGATCCCAGGTTGCTGGGGGACGTGGAGCCACCTC 64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000109625.8 ENSMUST00000109627.8 |
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| 3UTR CCA 90 bp | CTCGCCAGTTGGGCACAGATCGGCTCAGGGTCTCCGGGAGTAGCTTaGGTGGTGCATCGTCTGGGTCAGAGGACTGCAGTGTGGGTGAGG | + |
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Preference number: 1 (lower is better) Translates to: LASWAQIGSGSPGVA*VVHRLGQRTAVWVR Trigger: CCTCACCCACACTGCAGTCCTCTGACCCAGACGATGCACCACCCAAGCTACTCCCGGAGACCCTGAGCCGATCTGTGCCCAACTGGCGAG 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000109623.8 |
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| 3UTR CCA 90 bp | CCTCAGGAGGGATGGACAGATCGAGCACCTCTGACTCTCGCCAGTTaGGCACAGATCGGCTCAGGGTCTCCGGGAGTAGCTTGGGTGGTG | + |
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Preference number: 1 (lower is better) Translates to: PQEGWTDRAPLTLAS*AQIGSGSPGVAWVV Trigger: CACCACCCAAGCTACTCCCGGAGACCCTGAGCCGATCTGTGCCCAACTGGCGAGAGTCAGAGGTGCTCGATCTGTCCATCCCTCCTGAGG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000109623.8 |
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| 3UTR CCA 90 bp | CTGTGGCTTCCACGACAAACCGCACAGACTGGACTGTGCCAGGCCTaGCTAAGGCAAGGGAGGCCACGCCTTCAGCGACCCTGTTCTGAG | + |
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Preference number: 1 (lower is better) Translates to: LWLPRQTAQTGLCQA*LRQGRPRLQRPCSE Trigger: CTCAGAACAGGGTCGCTGAAGGCGTGGCCTCCCTTGCCTTAGCCAGGCCTGGCACAGTCCAGTCTGTGCGGTTTGTCGTGGAAGCCACAG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000109625.8 ENSMUST00000109627.8 |
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| 3UTR CCA 90 bp | CTGGGATCAGAGTGGCCTGTGGCTTCCACGACAAACCGCACAGACTaGACTGTGCCAGGCCTGGCTAAGGCAAGGGAGGCCACGCCTTCA | + |
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Preference number: 1 (lower is better) Translates to: LGSEWPVASTTNRTD*TVPGLAKAREATPS Trigger: TGAAGGCGTGGCCTCCCTTGCCTTAGCCAGGCCTGGCACAGTCCAGTCTGTGCGGTTTGTCGTGGAAGCCACAGGCCACTCTGATCCCAG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000109625.8 ENSMUST00000109627.8 |
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| 3UTR CCA 90 bp | CCATCCCAAGAAGGGCCTGAGGTGGCTCCACGTCCCCCAGCAACCTaGGATCAGAGTGGCCTGTGGCTTCCACGACAAACCGCACAGACT | + |
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Preference number: 1 (lower is better) Translates to: PSQEGPEVAPRPPAT*DQSGLWLPRQTAQT Trigger: AGTCTGTGCGGTTTGTCGTGGAAGCCACAGGCCACTCTGATCCCAGGTTGCTGGGGGACGTGGAGCCACCTCAGGCCCTTCTTGGGATGG 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000109625.8 ENSMUST00000109627.8 |
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| 3UTR CCA 90 bp | CCAGTGCCTGGCCTGAATCTGGGGCTTTGGTCTCTGCCATTGGCATaGATGCCTCAGTTCCCTAGCAGCAGAGGGCAACAGACGCTGCCC | + |
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Preference number: 1 (lower is better) Translates to: PVPGLNLGLWSLPLA*MPQFPSSRGQQTLP Trigger: GGGCAGCGTCTGTTGCCCTCTGCTGCTAGGGAACTGAGGCATCCATGCCAATGGCAGAGACCAAAGCCCCAGATTCAGGCCAGGCACTGG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000109625.8 ENSMUST00000109627.8 |
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| 3UTR CCA 90 bp | CAGACTCACCCTGTCAAGGAAGGAGGACAGCTGTGGCCACCTCTGTaGCGCCTTCTATCCCAGGGAATCCACCAGCTAGCTAAGGCCTCC | + |
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Preference number: 1 (lower is better) Translates to: QTHPVKEGGQLWPPL*RLLSQGIHQLAKAS Trigger: GGAGGCCTTAGCTAGCTGGTGGATTCCCTGGGATAGAAGGCGCCACAGAGGTGGCCACAGCTGTCCTCCTTCCTTGACAGGGTGAGTCTG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000109627.8 |
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| 3UTR CCA 90 bp | TCCCTCCCTGCTAGTCTCCCAGTGCCTGGCCTGAATCTGGGGCTTTaGTCTCTGCCATTGGCATGGATGCCTCAGTTCCCTAGCAGCAGA | + |
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Preference number: 1 (lower is better) Translates to: SLPASLPVPGLNLGL*SLPLAWMPQFPSSR Trigger: TCTGCTGCTAGGGAACTGAGGCATCCATGCCAATGGCAGAGACCAAAGCCCCAGATTCAGGCCAGGCACTGGGAGACTAGCAGGGAGGGA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000109625.8 ENSMUST00000109627.8 |
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| 3UTR TCA 90 bp | TGCAGTGAAGATCTGACCTTCAAGATGACCATCCCAAGAAGGGCCTaGGGTGGCTCCACGTCCCCCAGCAACCTGGGATCAGAGTGGCCT | + |
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Preference number: 1 (lower is better) Translates to: CSEDLTFKMTIPRRA*GGSTSPSNLGSEWP Trigger: AGGCCACTCTGATCCCAGGTTGCTGGGGGACGTGGAGCCACCTCAGGCCCTTCTTGGGATGGTCATCTTGAAGGTCAGATCTTCACTGCA 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000109625.8 ENSMUST00000109627.8 |
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| 3UTR GCA 90 bp | GGGGCCTTCAGTAGGCTGATGATGCAGGGCTATGTAAGGAGTCTGTaGAGCCTCTGGGCCTCCTGCTCCAGACCATTCAGGAGAGAGAAG | + |
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Preference number: 1 (lower is better) Translates to: GAFSRLMMQGYVRSL*SLWASCSRPFRREK Trigger: CTTCTCTCTCCTGAATGGTCTGGAGCAGGAGGCCCAGAGGCTGCACAGACTCCTTACATAGCCCTGCATCATCAGCCTACTGAAGGCCCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000109627.8 |
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| 3UTR TCA 90 bp | GCTTCATGCTGCCTTGCCACCCTGTCCAGCCTTTCACAGAGGGACTaGCTTAGATCAGGGCAAGAACCACAGCAGGGATGGATGCCAACC | + |
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Preference number: 1 (lower is better) Translates to: ASCCLATLSSLSQRD*LRSGQEPQQGWMPT Trigger: GGTTGGCATCCATCCCTGCTGTGGTTCTTGCCCTGATCTAAGTCAGTCCCTCTGTGAAAGGCTGGACAGGGTGGCAAGGCAGCATGAAGC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000109627.8 |
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| 3UTR GCA 90 bp | AGAAGAGGGCTGCTCATTGGCAGGCTCGCATCTTCCCTGTGCCCGTaGACCTTGAGGCTTGTGCAGAGTATGCAGCGATTTTACCCGTCA | + |
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Preference number: 1 (lower is better) Translates to: RRGLLIGRLASSLCP*TLRLVQSMQRFYPS Trigger: TGACGGGTAAAATCGCTGCATACTCTGCACAAGCCTCAAGGTGCACGGGCACAGGGAAGATGCGAGCCTGCCAATGAGCAGCCCTCTTCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000109627.8 |
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| 3UTR GCA 90 bp | GGAGAGAGAAGAGGGCTGCTCATTGGCAGGCTCGCATCTTCCCTGTaGCCGTGCACCTTGAGGCTTGTGCAGAGTATGCAGCGATTTTAC | + |
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Preference number: 1 (lower is better) Translates to: GERRGLLIGRLASSL*PCTLRLVQSMQRFY Trigger: GTAAAATCGCTGCATACTCTGCACAAGCCTCAAGGTGCACGGGCACAGGGAAGATGCGAGCCTGCCAATGAGCAGCCCTCTTCTCTCTCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000109627.8 |
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| 3UTR CCA 90 bp | AGTAGGCTGATGATGCAGGGCTATGTAAGGAGTCTGTGCAGCCTCTaGGCCTCCTGCTCCAGACCATTCAGGAGAGAGAAGAGGGCTGCT | + |
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Preference number: 1 (lower is better) Translates to: SRLMMQGYVRSLCSL*ASCSRPFRREKRAA Trigger: AGCAGCCCTCTTCTCTCTCCTGAATGGTCTGGAGCAGGAGGCCCAGAGGCTGCACAGACTCCTTACATAGCCCTGCATCATCAGCCTACT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000109627.8 |
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| 3UTR TCA 90 bp | TCCATCTCAAAACCCAAGACCCAGGACTCACCCACTCCTAGTTCCTaGCAAGTAGGAGGGAAGGGTGCGCTTACAGGACACGACCTACAG | + |
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Preference number: 1 (lower is better) Translates to: SISKPKTQDSPTPSS*QVGGKGALTGHDLQ Trigger: CTGTAGGTCGTGTCCTGTAAGCGCACCCTTCCCTCCTACTTGTCAGGAACTAGGAGTGGGTGAGTCCTGGGTCTTGGGTTTTGAGATGGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000109627.8 |
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| 3UTR GCA 90 bp | GCTGTAGCTGGGCTCTTCCTCTACCAGTCCCCACAGTACCACATCTaGAGTGAAGATCTGACCTTCAAGATGACCATCCCAAGAAGGGCC | + |
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Preference number: 1 (lower is better) Translates to: AVAGLFLYQSPQYHI*SEDLTFKMTIPRRA Trigger: GGCCCTTCTTGGGATGGTCATCTTGAAGGTCAGATCTTCACTGCAGATGTGGTACTGTGGGGACTGGTAGAGGAAGAGCCCAGCTACAGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000109625.8 ENSMUST00000109627.8 |
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| 3UTR TCA 90 bp | TTTAAATGCCAGGCCAGCCTGGGCTCTGAAGCCTCCATACTCCAGTaGAGTATCTCAGCCTCCTTTGAAACGAGGCAACGCCCTCTGATC | + |
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Preference number: 1 (lower is better) Translates to: FKCQASLGSEASILQ*SISASFETRQRPLI Trigger: GATCAGAGGGCGTTGCCTCGTTTCAAAGGAGGCTGAGATACTTCACTGGAGTATGGAGGCTTCAGAGCCCAGGCTGGCCTGGCATTTAAA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000109627.8 |
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| 3UTR TCA 90 bp | CGATACAATATTGAAGAGCAGCAGAACAAAACGTACAAGACAGAGTaGTCAGCACGAGCCCGCCCTCCCCTGGCCCAGATCTACCGAATC | + |
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Preference number: 1 (lower is better) Translates to: RYNIEEQQNKTYKTE*SARARPPLAQIYRI Trigger: GATTCGGTAGATCTGGGCCAGGGGAGGGCGGGCTCGTGCTGATCACTCTGTCTTGTACGTTTTGTTCTGCTGCTCTTCAATATTGTATCG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000109627.8 |
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| 3UTR GCA 90 bp | ACACACACGGATCTACACAAGAAGGAGCCAAGGGGCAAACACACATaGACAGCCAGAAGTTCCTACAGCAGGTTCTTGCAGCACCTTTGG | + |
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Preference number: 1 (lower is better) Translates to: THTDLHKKEPRGKHT*TARSSYSRFLQHLW Trigger: CCAAAGGTGCTGCAAGAACCTGCTGTAGGAACTTCTGGCTGTGCATGTGTGTTTGCCCCTTGGCTCCTTCTTGTGTAGATCCGTGTGTGT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000109625.8 ENSMUST00000109627.8 |
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| 3UTR CCA 90 bp | AAAAAGGTCACAAATGACACAGACTCTCAGGAAAACACATTTCTATaGTCTCTGCAAACACCTGTAACTGGCACCCAGGTGGTGGTTCAC | + |
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Preference number: 1 (lower is better) Translates to: KKVTNDTDSQENTFL*SLQTPVTGTQVVVH Trigger: GTGAACCACCACCTGGGTGCCAGTTACAGGTGTTTGCAGAGACCATAGAAATGTGTTTTCCTGAGAGTCTGTGTCATTTGTGACCTTTTT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000109625.8 ENSMUST00000109627.8 |
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| 3UTR-3UTR TCA 90 bp | TGGCCTGTGGCTTCCACGACAAACCGCACAGACTGGACTGTGCCAGGCCTGGCTACAGGCATACGGGTCTaGGGGCAGGGACGGGGTGGG | + |
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Preference number: 2 (lower is better) Translates to: WPVASTTNRTDWTVPGLATGIRV*GQGRGG Trigger: CCCACCCCGTCCCTGCCCTCAGACCCGTATGCCTGT...AGCCAGGCCTGGCACAGTCCAGTCTGTGCGGTTTGTCGTGGAAGCCACAGGCCA 66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000109625.8 ENSMUST00000109627.8 |
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| 3UTR-3UTR TCA 90 bp | GCAGAGGGCAACAGACGCTGCCCAAGGCACCCGAAGTCTTCCAACAGGCTAGGCACAGGCATACGGGTCTaGGGGCAGGGACGGGGTGGG | + |
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Preference number: 2 (lower is better) Translates to: AEGNRRCPRHPKSSNRLGTGIRV*GQGRGG Trigger: CCCACCCCGTCCCTGCCCTCAGACCCGTATGCCTGT...GCCTAGCCTGTTGGAAGACTTCGGGTGCCTTGGGCAGCGTCTGTTGCCCTCTGC 66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000109625.8 ENSMUST00000109627.8 |
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| 3UTR-3UTR CCA 90 bp | CTGAGGTGGCTCCACGTCCCCCAGCAACCTGGGATCAGAGTGGCCTGTGGCTTCCTAGGCGGGATCTCCTaGGGGCCCTGCAGATGGCGA | + |
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Preference number: 2 (lower is better) Translates to: LRWLHVPQQPGIRVACGFLGGIS*GPCRWR Trigger: TCGCCATCTGCAGGGCCCCCAGGAGATCCCGCCTAG...GAAGCCACAGGCCACTCTGATCCCAGGTTGCTGGGGGACGTGGAGCCACCTCAG 66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000109625.8 ENSMUST00000109627.8 |
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| 3UTR-3UTR CCA 90 bp | CCCTCAGGCTGGGCACCTGTAGTGCTTCATGCTGCCTTGCCACCCTGTCCAGCCGTGAATCCCAGGCAGTaGCCAAGGGCAGGCCAGTGC | + |
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Preference number: 2 (lower is better) Translates to: PSGWAPVVLHAALPPCPAVNPRQ*PRAGQC Trigger: GCACTGGCCTGCCCTTGGCCACTGCCTGGGATTCAC...GGCTGGACAGGGTGGCAAGGCAGCATGAAGCACTACAGGTGCCCAGCCTGAGGG 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000109627.8 |
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| 3UTR-3UTR GCA 90 bp | GGTCTGAGGGCAGGGACGGGGTGGGAGCACAAGTATGACTCCAGGAAGGAGGCCATCTCCTGGGGGCCCTaGAGATGGCGAGATAGCACC | + |
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Preference number: 2 (lower is better) Translates to: GLRAGTGWEHKYDSRKEAISWGP*RWRDST Trigger: GGTGCTATCTCGCCATCTGCAGGGCCCCCAGGAGAT...GGCCTCCTTCCTGGAGTCATACTTGTGCTCCCACCCCGTCCCTGCCCTCAGACC 63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000109625.8 ENSMUST00000109627.8 |
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| 3UTR-3UTR CCA 90 bp | GGCAAGGGAGGCCACGCCTTCAGCGACCCTGTTCTGAGGAACCGTAAAGGGTGTAGGGAAGCGGACCTCTaGCCCAGCTGCTGCCACCCT | + |
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Preference number: 2 (lower is better) Translates to: GKGGHAFSDPVLRNRKGCREADL*PSCCHP Trigger: AGGGTGGCAGCAGCTGGGCCAGAGGTCCGCTTCCCT...ACACCCTTTACGGTTCCTCAGAACAGGGTCGCTGAAGGCGTGGCCTCCCTTGCC 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000109625.8 ENSMUST00000109627.8 |
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| 3UTR CAA 90 bp | TCTCGCCAGTTGGGCACAGATCGGCTCAGGGTCTCCGGGAGTAGCTaGGGTGGTGCATCGTCTGGGTCAGAGGACTGCAGTGTGGGTGAG | + |
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Preference number: 2 (lower is better) Translates to: SRQLGTDRLRVSGSS*GGASSGSEDCSVGE Trigger: CTCACCCACACTGCAGTCCTCTGACCCAGACGATGCACCACCCAAGCTACTCCCGGAGACCCTGAGCCGATCTGTGCCCAACTGGCGAGA 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000109623.8 |
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| 3UTR CAA 90 bp | GCCTCAGGAGGGATGGACAGATCGAGCACCTCTGACTCTCGCCAGTaGGGCACAGATCGGCTCAGGGTCTCCGGGAGTAGCTTGGGTGGT | + |
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Preference number: 2 (lower is better) Translates to: ASGGMDRSSTSDSRQ*GTDRLRVSGSSLGG Trigger: ACCACCCAAGCTACTCCCGGAGACCCTGAGCCGATCTGTGCCCAACTGGCGAGAGTCAGAGGTGCTCGATCTGTCCATCCCTCCTGAGGC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000109623.8 |
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| 3UTR CAA 90 bp | GCCCAGCTGCTGCCACCCTCAATGGTGTCGAGGGAGGGACCCATTTaGGCCTCATCCTTCACTCAGTGCCAGGGTGGTGAGAGCCTGTGC | + |
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Preference number: 2 (lower is better) Translates to: AQLLPPSMVSREGPI*ASSFTQCQGGESLC Trigger: GCACAGGCTCTCACCACCCTGGCACTGAGTGAAGGATGAGGCCAAAATGGGTCCCTCCCTCGACACCATTGAGGGTGGCAGCAGCTGGGC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000109625.8 ENSMUST00000109627.8 |
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| 3UTR-3UTR TCA 90 bp | GGCAAGGGAGGCCACGCCTTCAGCGACCCTGTTCTGAGGAACCGTAAAGGGTGTTCAGTGCCAGGGTGGTaGGAGCCTGTGCCCACCCTA | + |
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Preference number: 2 (lower is better) Translates to: GKGGHAFSDPVLRNRKGCSVPGW*EPVPTL Trigger: TAGGGTGGGCACAGGCTCTCACCACCCTGGCACTGA...ACACCCTTTACGGTTCCTCAGAACAGGGTCGCTGAAGGCGTGGCCTCCCTTGCC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000109625.8 ENSMUST00000109627.8 |
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| 3UTR-3UTR GCA 90 bp | TGGCCTGTGGCTTCCACGACAAACCGCACAGACTGGACTGTGCCAGGCCTGGCTGACCTCTGGCCCAGCTaGTGCCACCCTCAATGGTGT | + |
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Preference number: 2 (lower is better) Translates to: WPVASTTNRTDWTVPGLADLWPS*CHPQWC Trigger: ACACCATTGAGGGTGGCAGCAGCTGGGCCAGAGGTC...AGCCAGGCCTGGCACAGTCCAGTCTGTGCGGTTTGTCGTGGAAGCCACAGGCCA 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000109625.8 ENSMUST00000109627.8 |
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| 3UTR-3UTR GCA 90 bp | CCGGAACCCAAGGGTAGAACTGACCAGGCTGGGTTCCACCATCCATTAAGTGCAGGGCTGGGGCTGTGCTaGAGACCCTGGCAGGCAGGC | + |
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Preference number: 2 (lower is better) Translates to: PEPKGRTDQAGFHHPLSAGLGLC*RPWQAG Trigger: GCCTGCCTGCCAGGGTCTGCAGCACAGCCCCAGCCC...TGCACTTAATGGATGGTGGAACCCAGCCTGGTCAGTTCTACCCTTGGGTTCCGG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000109627.8 |
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| 3UTR-3UTR GCA 90 bp | GTATGCCCAACGTCTGACCCCGCCACTCGGCCCCTTCAGACCCTCTGGTCCATCTGTCCACTTGTCCCCTaGACTTCCCCGCTAGTCACC | + |
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Preference number: 2 (lower is better) Translates to: VCPTSDPATRPLQTLWSICPLVP*TSPLVT Trigger: GGTGACTAGCGGGGAAGTGCAGGGGACAAGTGGACA...GATGGACCAGAGGGTCTGAAGGGGCCGAGTGGCGGGGTCAGACGTTGGGCATAC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENSMUST00000109627.8 |
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| 3UTR-3UTR TCA 90 bp | GCGGCCACCTTCTCAAAATCCTCCGGGCTGCAGAATTCCTTGATGGTCACGGTCGGACTGCAGTGTGGGTaGGGGGCAGCCGGAAGAGCT | + |
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Preference number: 2 (lower is better) Translates to: AATFSKSSGLQNSLMVTVGLQCG*GAAGRA Trigger: AGCTCTTCCGGCTGCCCCTCACCCACACTGCAGTCC...GACCGTGACCATCAAGGAATTCTGCAGCCCGGAGGATTTTGAGAAGGTGGCCGC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000109623.8 |
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| 3UTR-3UTR GCA 90 bp | CCCTCAGGCTGGGCACCTGTAGTGCTTCATGCTGCCTTGCCACCCTGTCCAGCCTCATCCTTCACTCAGTaGCAGGGTGGTGAGAGCCTG | + |
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Preference number: 2 (lower is better) Translates to: PSGWAPVVLHAALPPCPASSFTQ*QGGESL Trigger: CAGGCTCTCACCACCCTGGCACTGAGTGAAGGATGA...GGCTGGACAGGGTGGCAAGGCAGCATGAAGCACTACAGGTGCCCAGCCTGAGGG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000109627.8 |
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| 3UTR-3UTR CCA 90 bp | CCCTCAGGCTGGGCACCTGTAGTGCTTCATGCTGCCTTGCCACCCTGTCCAGCCGAACCACAGCAGGGATaGATGCCAACCCTCCATCTC | + |
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Preference number: 2 (lower is better) Translates to: PSGWAPVVLHAALPPCPAEPQQG*MPTLHL Trigger: GAGATGGAGGGTTGGCATCCATCCCTGCTGTGGTTC...GGCTGGACAGGGTGGCAAGGCAGCATGAAGCACTACAGGTGCCCAGCCTGAGGG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000109627.8 |
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| 3UTR CAA 90 bp | ATGGTCACGGTCAGGAGGTTGCTGGTGACATCTGTGACAACTACATaGGAGCATGGCGACATCTCGGGGCGCCAGTCCCCAGCCTCAGGC | + |
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Preference number: 2 (lower is better) Translates to: MVTVRRLLVTSVTTT*EHGDISGRQSPASG Trigger: GCCTGAGGCTGGGGACTGGCGCCCCGAGATGTCGCCATGCTCCAATGTAGTTGTCACAGATGTCACCAGCAACCTCCTGACCGTGACCAT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000109623.8 |
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| 3UTR-3UTR CCA 90 bp | CAACTACATTGGAGCATGGCGACATCTCGGGGCGCCAGTCCCCAGCCTCAGGCTAGGAGCCAGCACCTGTaGGCTCCAGAGCTGTATGTA | + |
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Preference number: 2 (lower is better) Translates to: QLHWSMATSRGASPQPQARSQHL*APELYV Trigger: TACATACAGCTCTGGAGCCCACAGGTGCTGGCTCCT...AGCCTGAGGCTGGGGACTGGCGCCCCGAGATGTCGCCATGCTCCAATGTAGTTG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000109623.8 |
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| 3UTR-3UTR CCA 90 bp | GAAACTGAAGACCCCGGGGAGGTCTCTAGGCCTCCTCTTTCCTCCACAAACATCAGGGAAGCGGACCTCTaGCCCAGCTGCTGCCACCCT | + |
|
Preference number: 2 (lower is better) Translates to: ETEDPGEVSRPPLSSTNIREADL*PSCCHP Trigger: AGGGTGGCAGCAGCTGGGCCAGAGGTCCGCTTCCCT...GATGTTTGTGGAGGAAAGAGGAGGCCTAGAGACCTCCCCGGGGTCTTCAGTTTC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000109625.8 ENSMUST00000109627.8 |
||
| 3UTR-3UTR CCA 90 bp | GCAGAGGGCAACAGACGCTGCCCAAGGCACCCGAAGTCTTCCAACAGGCTAGGCAGCAAACTGGAAGGGTaGGGGAAACTGAAGACCCCG | + |
|
Preference number: 2 (lower is better) Translates to: AEGNRRCPRHPKSSNRLGSKLEG*GKLKTP Trigger: CGGGGTCTTCAGTTTCCCCCACCCTTCCAGTTTGCT...GCCTAGCCTGTTGGAAGACTTCGGGTGCCTTGGGCAGCGTCTGTTGCCCTCTGC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000109625.8 ENSMUST00000109627.8 |
||
| 3UTR CAA 90 bp | AGTCTCCCAGTGCCTGGCCTGAATCTGGGGCTTTGGTCTCTGCCATaGGCATGGATGCCTCAGTTCCCTAGCAGCAGAGGGCAACAGACG | + |
|
Preference number: 2 (lower is better) Translates to: SLPVPGLNLGLWSLP*AWMPQFPSSRGQQT Trigger: CGTCTGTTGCCCTCTGCTGCTAGGGAACTGAGGCATCCATGCCAATGGCAGAGACCAAAGCCCCAGATTCAGGCCAGGCACTGGGAGACT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000109625.8 ENSMUST00000109627.8 |
||
| 3UTR-3UTR TCA 90 bp | CATCTGCAAGAGGAGGCTGTAGCTGGGCTCTTCCTCTACCAGTCCCCACAGTACGTGGGAGCACAAGTATaGCTCCAGGAAGGAGGCCCC | + |
|
Preference number: 2 (lower is better) Translates to: HLQEEAVAGLFLYQSPQYVGAQV*LQEGGP Trigger: GGGGCCTCCTTCCTGGAGTCATACTTGTGCTCCCAC...GTACTGTGGGGACTGGTAGAGGAAGAGCCCAGCTACAGCCTCCTCTTGCAGATG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000109625.8 ENSMUST00000109627.8 |
||
| 3UTR-3UTR GCA 90 bp | CATCTGCAAGAGGAGGCTGTAGCTGGGCTCTTCCTCTACCAGTCCCCACAGTACGACCTCTGGCCCAGCTaGTGCCACCCTCAATGGTGT | + |
|
Preference number: 2 (lower is better) Translates to: HLQEEAVAGLFLYQSPQYDLWPS*CHPQWC Trigger: ACACCATTGAGGGTGGCAGCAGCTGGGCCAGAGGTC...GTACTGTGGGGACTGGTAGAGGAAGAGCCCAGCTACAGCCTCCTCTTGCAGATG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000109625.8 ENSMUST00000109627.8 |
||
| 3UTR-3UTR TCA 90 bp | GAAACTGAAGACCCCGGGGAGGTCTCTAGGCCTCCTCTTTCCTCCACAAACATCGTGGGAGCACAAGTATaGCTCCAGGAAGGAGGCCCC | + |
|
Preference number: 2 (lower is better) Translates to: ETEDPGEVSRPPLSSTNIVGAQV*LQEGGP Trigger: GGGGCCTCCTTCCTGGAGTCATACTTGTGCTCCCAC...GATGTTTGTGGAGGAAAGAGGAGGCCTAGAGACCTCCCCGGGGTCTTCAGTTTC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000109625.8 ENSMUST00000109627.8 |
||
| 3UTR-3UTR GCA 90 bp | TTATTTGGGGGAAAAGCCAATTGGCACTTGGACGGTATGAGAGCTAACACGGGAGGGCTGGGGCTGTGCTaGAGACCCTGGCAGGCAGGC | + |
|
Preference number: 2 (lower is better) Translates to: LFGGKANWHLDGMRANTGGLGLC*RPWQAG Trigger: GCCTGCCTGCCAGGGTCTGCAGCACAGCCCCAGCCC...TCCCGTGTTAGCTCTCATACCGTCCAAGTGCCAATTGGCTTTTCCCCCAAATAA 58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000109625.8 ENSMUST00000109627.8 |
||
| 3UTR-3UTR GCA 90 bp | CAGCCCTTATTTGGGGGAAAAGCCAATTGGCACTTGGACGGTATGAGAGCTAACGGAGGGCTGGGGCTGTaGTGCAGACCCTGGCAGGCA | + |
|
Preference number: 2 (lower is better) Translates to: QPLFGGKANWHLDGMRANGGLGL*CRPWQA Trigger: TGCCTGCCAGGGTCTGCAGCACAGCCCCAGCCCTCC...GTTAGCTCTCATACCGTCCAAGTGCCAATTGGCTTTTCCCCCAAATAAGGGCTG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000109625.8 ENSMUST00000109627.8 |
||
| 3UTR-3UTR TCA 90 bp | CAGCCCTTATTTGGGGGAAAAGCCAATTGGCACTTGGACGGTATGAGAGCTAACATCCCAAGAAGGGCCTaGGGTGGCTCCACGTCCCCC | + |
|
Preference number: 2 (lower is better) Translates to: QPLFGGKANWHLDGMRANIPRRA*GGSTSP Trigger: GGGGGACGTGGAGCCACCTCAGGCCCTTCTTGGGAT...GTTAGCTCTCATACCGTCCAAGTGCCAATTGGCTTTTCCCCCAAATAAGGGCTG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000109625.8 ENSMUST00000109627.8 |
||
| 3UTR-3UTR GCA 90 bp | CCTGGCCTGAATCTGGGGCTTTGGTCTCTGCCATTGGCATGGATGCCTCAGTTCTCATCCTTCACTCAGTaGCAGGGTGGTGAGAGCCTG | + |
|
Preference number: 2 (lower is better) Translates to: PGLNLGLWSLPLAWMPQFSSFTQ*QGGESL Trigger: CAGGCTCTCACCACCCTGGCACTGAGTGAAGGATGA...GAACTGAGGCATCCATGCCAATGGCAGAGACCAAAGCCCCAGATTCAGGCCAGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000109625.8 ENSMUST00000109627.8 |
||
| 3UTR-3UTR GCA 90 bp | ACGCCCTCTGATCCACCAGCTCCCTCTGAAGTTGGGGAGGGAGGCTCATTTTGCTGCCATTGGCATGGATaGCTCAGTTCCCTAGCAGCA | + |
|
Preference number: 2 (lower is better) Translates to: TPSDPPAPSEVGEGGSFCCHWHG*LSSLAA Trigger: TGCTGCTAGGGAACTGAGGCATCCATGCCAATGGCA...GCAAAATGAGCCTCCCTCCCCAACTTCAGAGGGAGCTGGTGGATCAGAGGGCGT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000109627.8 |
||
| 3UTR-3UTR CCA 90 bp | GAAACTGAAGACCCCGGGGAGGTCTCTAGGCCTCCTCTTTCCTCCACAAACATCACAAACCGCACAGACTaGACTGTGCCAGGCCTGGCT | + |
|
Preference number: 2 (lower is better) Translates to: ETEDPGEVSRPPLSSTNITNRTD*TVPGLA Trigger: AGCCAGGCCTGGCACAGTCCAGTCTGTGCGGTTTGT...GATGTTTGTGGAGGAAAGAGGAGGCCTAGAGACCTCCCCGGGGTCTTCAGTTTC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000109625.8 ENSMUST00000109627.8 |
||
| 3UTR-3UTR CCA 90 bp | ATACAGGAACACTCTGGTCAACGCCCAGGTGAATCCCAGGCAGTGGCCAAGGGCTCTCTGCCATTGGCATaGATGCCTCAGTTCCCTAGC | + |
|
Preference number: 2 (lower is better) Translates to: IQEHSGQRPGESQAVAKGSLPLA*MPQFPS Trigger: GCTAGGGAACTGAGGCATCCATGCCAATGGCAGAGA...GCCCTTGGCCACTGCCTGGGATTCACCTGGGCGTTGACCAGAGTGTTCCTGTAT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000109625.8 ENSMUST00000109627.8 |
||
| 3UTR-3UTR CCA 90 bp | CAGCCCTTATTTGGGGGAAAAGCCAATTGGCACTTGGACGGTATGAGAGCTAACTGGGGCAAGGAGGGCTaGGGCTGTGCTGCAGACCCT | + |
|
Preference number: 2 (lower is better) Translates to: QPLFGGKANWHLDGMRANWGKEG*GCAADP Trigger: AGGGTCTGCAGCACAGCCCCAGCCCTCCTTGCCCCA...GTTAGCTCTCATACCGTCCAAGTGCCAATTGGCTTTTCCCCCAAATAAGGGCTG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000109625.8 ENSMUST00000109627.8 |
||
| 3UTR CAA 90 bp | ACCCCAGCGGCCACCTTCTCAAAATCCTCCGGGCTGCAGAATTCCTaGATGGTCACGGTCAGGAGGTTGCTGGTGACATCTGTGACAACT | + |
|
Preference number: 2 (lower is better) Translates to: TPAATFSKSSGLQNS*MVTVRRLLVTSVTT Trigger: AGTTGTCACAGATGTCACCAGCAACCTCCTGACCGTGACCATCAAGGAATTCTGCAGCCCGGAGGATTTTGAGAAGGTGGCCGCTGGGGT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000109623.8 |
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| 3UTR-3UTR GCA 90 bp | GACAATTTATTTGGGGGTGAAGGAGGTTTCACCCCCTTTCCTGGCATCGATACACCCCTCAGCCAGGTATaGCCAACGTCTGACCCCGCC | + |
|
Preference number: 2 (lower is better) Translates to: DNLFGGEGGFTPFPGIDTPLSQV*PTSDPA Trigger: GGCGGGGTCAGACGTTGGGCATACCTGGCTGAGGGG...TGTATCGATGCCAGGAAAGGGGGTGAAACCTCCTTCACCCCCAAATAAATTGTC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt. Matches the following 1 transcripts: ENSMUST00000109627.8 |
||
| 3UTR-3UTR CCA 90 bp | CCTGGCCTGAATCTGGGGCTTTGGTCTCTGCCATTGGCATGGATGCCTCAGTTCGGGAGGGACCCATTTTaGCCTCATCCTTCACTCAGT | + |
|
Preference number: 2 (lower is better) Translates to: PGLNLGLWSLPLAWMPQFGRDPF*PHPSLS Trigger: ACTGAGTGAAGGATGAGGCCAAAATGGGTCCCTCCC...GAACTGAGGCATCCATGCCAATGGCAGAGACCAAAGCCCCAGATTCAGGCCAGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000109625.8 ENSMUST00000109627.8 |
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| 3UTR-3UTR TCA 90 bp | CATGCACAGCCAGAAGTTCCTACAGCAGGTTCTTGCAGCACCTTTGGTAGAAAATCAGTGCCAGGGTGGTaGGAGCCTGTGCCCACCCTA | + |
|
Preference number: 2 (lower is better) Translates to: HAQPEVPTAGSCSTFGRKSVPGW*EPVPTL Trigger: TAGGGTGGGCACAGGCTCTCACCACCCTGGCACTGA...TTTTCTACCAAAGGTGCTGCAAGAACCTGCTGTAGGAACTTCTGGCTGTGCATG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000109625.8 ENSMUST00000109627.8 |
||
| 3UTR-3UTR TCA 90 bp | GCACCGGAACCCAAGGGTAGAACTGACCAGGCTGGGTTCCACCATCCATTAAGTTCAGCGACCCTGTTCTaGGGAACCGTAAAGGGTGTT | + |
|
Preference number: 2 (lower is better) Translates to: APEPKGRTDQAGFHHPLSSATLF*GTVKGV Trigger: AACACCCTTTACGGTTCCTCAGAACAGGGTCGCTGA...ACTTAATGGATGGTGGAACCCAGCCTGGTCAGTTCTACCCTTGGGTTCCGGTGC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000109627.8 |
||
| 3UTR-3UTR CCA 90 bp | GAAACTGAAGACCCCGGGGAGGTCTCTAGGCCTCCTCTTTCCTCCACAAACATCCTAGGAGAGGCAGGGTaGGGGGATGTAGATAGGATA | + |
|
Preference number: 2 (lower is better) Translates to: ETEDPGEVSRPPLSSTNILGEAG*GDVDRI Trigger: TATCCTATCTACATCCCCCCACCCTGCCTCTCCTAG...GATGTTTGTGGAGGAAAGAGGAGGCCTAGAGACCTCCCCGGGGTCTTCAGTTTC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000109625.8 ENSMUST00000109627.8 |
||
| 3UTR-3UTR TCA 90 bp | GACAATTTATTTGGGGGTGAAGGAGGTTTCACCCCCTTTCCTGGCATCGATACACCACTGGGAACCACGTaGCCCAGAGAGCTGAAGCGT | + |
|
Preference number: 2 (lower is better) Translates to: DNLFGGEGGFTPFPGIDTPLGTT*PRELKR Trigger: ACGCTTCAGCTCTCTGGGTCACGTGGTTCCCAGTGG...TGTATCGATGCCAGGAAAGGGGGTGAAACCTCCTTCACCCCCAAATAAATTGTC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000109627.8 |
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| 3UTR-3UTR GCA 90 bp | GAAACTGAAGACCCCGGGGAGGTCTCTAGGCCTCCTCTTTCCTCCACAAACATCAGGGGCAAACACACATaGACAGCCAGAAGTTCCTAC | + |
|
Preference number: 2 (lower is better) Translates to: ETEDPGEVSRPPLSSTNIRGKHT*TARSSY Trigger: GTAGGAACTTCTGGCTGTGCATGTGTGTTTGCCCCT...GATGTTTGTGGAGGAAAGAGGAGGCCTAGAGACCTCCCCGGGGTCTTCAGTTTC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000109625.8 ENSMUST00000109627.8 |
||
| 3UTR-3UTR GCA 90 bp | CAGCCCTTATTTGGGGGAAAAGCCAATTGGCACTTGGACGGTATGAGAGCTAACGCACAGACTGGACTGTaGCAGGCCTGGCTAAGGCAA | + |
|
Preference number: 2 (lower is better) Translates to: QPLFGGKANWHLDGMRANAQTGL*QAWLRQ Trigger: TTGCCTTAGCCAGGCCTGGCACAGTCCAGTCTGTGC...GTTAGCTCTCATACCGTCCAAGTGCCAATTGGCTTTTCCCCCAAATAAGGGCTG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000109625.8 ENSMUST00000109627.8 |
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| 3UTR-3UTR GCA 90 bp | CCGGAACCCAAGGGTAGAACTGACCAGGCTGGGTTCCACCATCCATTAAGTGCAACATTTCCCTTTAAATaGCAGGCCAGCCTGGGCTCT | + |
|
Preference number: 2 (lower is better) Translates to: PEPKGRTDQAGFHHPLSATFPFK*QASLGS Trigger: AGAGCCCAGGCTGGCCTGGCATTTAAAGGGAAATGT...TGCACTTAATGGATGGTGGAACCCAGCCTGGTCAGTTCTACCCTTGGGTTCCGG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000109627.8 |
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| 3UTR-3UTR CCA 90 bp | TTCCTTGATGGTCACGGTCAGGAGGTTGCTGGTGACATCTGTGACAACTACATTCCGCCTCAGGAGGGATaGACAGATCGAGCACCTCTG | + |
|
Preference number: 2 (lower is better) Translates to: FLDGHGQEVAGDICDNYIPPQEG*TDRAPL Trigger: CAGAGGTGCTCGATCTGTCCATCCCTCCTGAGGCGG...AATGTAGTTGTCACAGATGTCACCAGCAACCTCCTGACCGTGACCATCAAGGAA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000109623.8 |
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| 3UTR-3UTR CCA 90 bp | CACAGCAGGGATGGATGCCAACCCTCCATCTCAAAACCCAAGACCCAGGACTCAGGGGGAAAAGCCAATTaGCACTTGGACGGTATGAGA | + |
|
Preference number: 2 (lower is better) Translates to: HSRDGCQPSISKPKTQDSGGKAN*HLDGMR Trigger: TCTCATACCGTCCAAGTGCCAATTGGCTTTTCCCCC...TGAGTCCTGGGTCTTGGGTTTTGAGATGGAGGGTTGGCATCCATCCCTGCTGTG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000109627.8 |
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| 3UTR CAA 90 bp | AAATCCTCCGGGCTGCAGAATTCCTTGATGGTCACGGTCAGGAGGTaGCTGGTGACATCTGTGACAACTACATTGGAGCATGGCGACATC | + |
|
Preference number: 2 (lower is better) Translates to: KSSGLQNSLMVTVRR*LVTSVTTTLEHGDI Trigger: GATGTCGCCATGCTCCAATGTAGTTGTCACAGATGTCACCAGCAACCTCCTGACCGTGACCATCAAGGAATTCTGCAGCCCGGAGGATTT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000109623.8 |
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| 3UTR-3UTR TCA 90 bp | TTTCTATGGTCTCTGCAAACACCTGTAACTGGCACCCAGGTGGTGGTTCACCTGTCAGCGACCCTGTTCTaGGGAACCGTAAAGGGTGTT | + |
|
Preference number: 2 (lower is better) Translates to: FLWSLQTPVTGTQVVVHLSATLF*GTVKGV Trigger: AACACCCTTTACGGTTCCTCAGAACAGGGTCGCTGA...CAGGTGAACCACCACCTGGGTGCCAGTTACAGGTGTTTGCAGAGACCATAGAAA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000109625.8 ENSMUST00000109627.8 |
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| 3UTR-3UTR CCA 90 bp | TTATTTGGGGGAAAAGCCAATTGGCACTTGGACGGTATGAGAGCTAACACGGGAAGAGGAGGCTGTAGCTaGGCTCTTCCTCTACCAGTC | + |
|
Preference number: 2 (lower is better) Translates to: LFGGKANWHLDGMRANTGRGGCS*ALPLPV Trigger: GACTGGTAGAGGAAGAGCCCAGCTACAGCCTCCTCT...TCCCGTGTTAGCTCTCATACCGTCCAAGTGCCAATTGGCTTTTCCCCCAAATAA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000109625.8 ENSMUST00000109627.8 |
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| 3UTR-3UTR CCA 90 bp | TTTCTATGGTCTCTGCAAACACCTGTAACTGGCACCCAGGTGGTGGTTCACCTGGGGGGAAAAGCCAATTaGCACTTGGACGGTATGAGA | + |
|
Preference number: 2 (lower is better) Translates to: FLWSLQTPVTGTQVVVHLGGKAN*HLDGMR Trigger: TCTCATACCGTCCAAGTGCCAATTGGCTTTTCCCCC...CAGGTGAACCACCACCTGGGTGCCAGTTACAGGTGTTTGCAGAGACCATAGAAA 51% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000109625.8 ENSMUST00000109627.8 |
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| 3UTR-3UTR CCA 90 bp | TTATTTGGGGGAAAAGCCAATTGGCACTTGGACGGTATGAGAGCTAACACGGGACTAGGAGAGGCAGGGTaGGGGGATGTAGATAGGATA | + |
|
Preference number: 2 (lower is better) Translates to: LFGGKANWHLDGMRANTGLGEAG*GDVDRI Trigger: TATCCTATCTACATCCCCCCACCCTGCCTCTCCTAG...TCCCGTGTTAGCTCTCATACCGTCCAAGTGCCAATTGGCTTTTCCCCCAAATAA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 2 transcripts: ENSMUST00000109625.8 ENSMUST00000109627.8 |
||
| 3UTR CCA 72 bp | GCACCCGCTGGCCGGTGGCAGCCGCCTCAGGAGGGATaGACAGATCGAGCACCTCTGACTCTCGCCAGTTGG | + |
|
Preference number: 3 (lower is better) Translates to: APAGRWQPPQEG*TDRAPLTLASW Trigger: CCAACTGGCGAGAGTCAGAGGTGCTCGATCTGTCCATCCCTCCTGAGGCGGCTGCCACCGGCCAGCGGGTGC 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000109623.8 |
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| 3UTR CCA 72 bp | TGGTCCGCAGCACCAGTGACATCAGGAGGCACCCGCTaGCCGGTGGCAGCCGCCTCAGGAGGGATGGACAGA | + |
|
Preference number: 3 (lower is better) Translates to: WSAAPVTSGGTR*PVAAASGGMDR Trigger: TCTGTCCATCCCTCCTGAGGCGGCTGCCACCGGCCAGCGGGTGCCTCCTGATGTCACTGGTGCTGCGGACCA 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000109623.8 |
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| 3UTR GCA 72 bp | CCTGTGCCCACCCTAGGCGGGATCTCCTGGGGGCCCTaGAGATGGCGAGATAGCACCGAGACCAAACACTGC | + |
|
Preference number: 3 (lower is better) Translates to: PVPTLGGISWGP*RWRDSTETKHC Trigger: GCAGTGTTTGGTCTCGGTGCTATCTCGCCATCTGCAGGGCCCCCAGGAGATCCCGCCTAGGGTGGGCACAGG 65% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000109625.8 ENSMUST00000109627.8 |
||
| 3UTR CCA 72 bp | CCAGCACCTGTGGGCTCCAGAGCTGTATGTAGCGCCTaGTCCGCAGCACCAGTGACATCAGGAGGCACCCGC | + |
|
Preference number: 3 (lower is better) Translates to: PAPVGSRAVCSA*SAAPVTSGGTR Trigger: GCGGGTGCCTCCTGATGTCACTGGTGCTGCGGACCAGGCGCTACATACAGCTCTGGAGCCCACAGGTGCTGG 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000109623.8 |
||
| 3UTR CCA 72 bp | CCACGACAAACCGCACAGACTGGACTGTGCCAGGCCTaGCTAAGGCAAGGGAGGCCACGCCTTCAGCGACCC | + |
|
Preference number: 3 (lower is better) Translates to: PRQTAQTGLCQA*LRQGRPRLQRP Trigger: GGGTCGCTGAAGGCGTGGCCTCCCTTGCCTTAGCCAGGCCTGGCACAGTCCAGTCTGTGCGGTTTGTCGTGG 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000109625.8 ENSMUST00000109627.8 |
||
| 3UTR CCA 72 bp | ACGTCTGACCCCGCCACTCGGCCCCTTCAGACCCTCTaGTCCATCACACAGCCGGTGCACTGCACATGGCTG | + |
|
Preference number: 3 (lower is better) Translates to: TSDPATRPLQTL*SITQPVHCTWL Trigger: CAGCCATGTGCAGTGCACCGGCTGTGTGATGGACCAGAGGGTCTGAAGGGGCCGAGTGGCGGGGTCAGACGT 65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000109627.8 |
||
| 3UTR CCA 72 bp | AAGCACAGGCATACGGGTCTGAGGGCAGGGACGGGGTaGGAGCACAAGTATGACTCCAGGAAGGAGGCCCCC | + |
|
Preference number: 3 (lower is better) Translates to: KHRHTGLRAGTG*EHKYDSRKEAP Trigger: GGGGGCCTCCTTCCTGGAGTCATACTTGTGCTCCCACCCCGTCCCTGCCCTCAGACCCGTATGCCTGTGCTT 64% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000109623.8 ENSMUST00000109625.8 ENSMUST00000109627.8 |
||
| 3UTR CCA 72 bp | GAGTGGCCTGTGGCTTCCACGACAAACCGCACAGACTaGACTGTGCCAGGCCTGGCTAAGGCAAGGGAGGCC | + |
|
Preference number: 3 (lower is better) Translates to: EWPVASTTNRTD*TVPGLAKAREA Trigger: GGCCTCCCTTGCCTTAGCCAGGCCTGGCACAGTCCAGTCTGTGCGGTTTGTCGTGGAAGCCACAGGCCACTC 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000109625.8 ENSMUST00000109627.8 |
||
| 3UTR CCA 72 bp | GGTGGCTCCACGTCCCCCAGCAACCTGGGATCAGAGTaGCCTGTGGCTTCCACGACAAACCGCACAGACTGG | + |
|
Preference number: 3 (lower is better) Translates to: GGSTSPSNLGSE*PVASTTNRTDW Trigger: CCAGTCTGTGCGGTTTGTCGTGGAAGCCACAGGCCACTCTGATCCCAGGTTGCTGGGGGACGTGGAGCCACC 64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000109625.8 ENSMUST00000109627.8 |
||
| 3UTR CCA 72 bp | GAAGGGCCTGAGGTGGCTCCACGTCCCCCAGCAACCTaGGATCAGAGTGGCCTGTGGCTTCCACGACAAACC | + |
|
Preference number: 3 (lower is better) Translates to: EGPEVAPRPPAT*DQSGLWLPRQT Trigger: GGTTTGTCGTGGAAGCCACAGGCCACTCTGATCCCAGGTTGCTGGGGGACGTGGAGCCACCTCAGGCCCTTC 64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000109625.8 ENSMUST00000109627.8 |
||
| 3UTR TCA 72 bp | AGCCGCCTCAGGAGGGATGGACAGATCGAGCACCTCTaGCTCTCGCCAGTTGGGCACAGATCGGCTCAGGGT | + |
|
Preference number: 3 (lower is better) Translates to: SRLRRDGQIEHL*LSPVGHRSAQG Trigger: ACCCTGAGCCGATCTGTGCCCAACTGGCGAGAGTCAGAGGTGCTCGATCTGTCCATCCCTCCTGAGGCGGCT 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000109623.8 |
||
| 3UTR GCA 72 bp | TGCCCCCTCAGGCTGGGCACCTGTAGTGCTTCATGCTaGCTTGCCACCCTGTCCAGCCTTTCACAGAGGGAC | + |
|
Preference number: 3 (lower is better) Translates to: CPLRLGTCSASC*LATLSSLSQRD Trigger: GTCCCTCTGTGAAAGGCTGGACAGGGTGGCAAGGCAGCATGAAGCACTACAGGTGCCCAGCCTGAGGGGGCA 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000109627.8 |
||
| 3UTR CCA 72 bp | TGGGCACAGATCGGCTCAGGGTCTCCGGGAGTAGCTTaGGTGGTGCATCGTCTGGGTCAGAGGACTGCAGTG | + |
|
Preference number: 3 (lower is better) Translates to: WAQIGSGSPGVA*VVHRLGQRTAV Trigger: CACTGCAGTCCTCTGACCCAGACGATGCACCACCCAAGCTACTCCCGGAGACCCTGAGCCGATCTGTGCCCA 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000109623.8 |
||
| 3UTR CCA 72 bp | GGATGGACAGATCGAGCACCTCTGACTCTCGCCAGTTaGGCACAGATCGGCTCAGGGTCTCCGGGAGTAGCT | + |
|
Preference number: 3 (lower is better) Translates to: GWTDRAPLTLAS*AQIGSGSPGVA Trigger: AGCTACTCCCGGAGACCCTGAGCCGATCTGTGCCCAACTGGCGAGAGTCAGAGGTGCTCGATCTGTCCATCC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000109623.8 |
||
| 3UTR-3UTR CAA 90 bp | GCAGAGGGCAACAGACGCTGCCCAAGGCACCCGAAGTCTTCCAACAGGCTAGGCAGGGAGGGACCCATTTaGGCCTCATCCTTCACTCAG | + |
|
Preference number: 3 (lower is better) Translates to: AEGNRRCPRHPKSSNRLGREGPI*ASSFTQ Trigger: CTGAGTGAAGGATGAGGCCAAAATGGGTCCCTCCCT...GCCTAGCCTGTTGGAAGACTTCGGGTGCCTTGGGCAGCGTCTGTTGCCCTCTGC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000109625.8 ENSMUST00000109627.8 |
||
| 3UTR GCA 72 bp | AGAGGGCTGCTCATTGGCAGGCTCGCATCTTCCCTGTaGCCGTGCACCTTGAGGCTTGTGCAGAGTATGCAG | + |
|
Preference number: 3 (lower is better) Translates to: RGLLIGRLASSL*PCTLRLVQSMQ Trigger: CTGCATACTCTGCACAAGCCTCAAGGTGCACGGGCACAGGGAAGATGCGAGCCTGCCAATGAGCAGCCCTCT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000109627.8 |
||
| 3UTR GCA 72 bp | TTTTGCCCCCTCAGGCTGGGCACCTGTAGTGCTTCATaGTGCCTTGCCACCCTGTCCAGCCTTTCACAGAGG | + |
|
Preference number: 3 (lower is better) Translates to: FCPLRLGTCSAS*CLATLSSLSQR Trigger: CCTCTGTGAAAGGCTGGACAGGGTGGCAAGGCAGCATGAAGCACTACAGGTGCCCAGCCTGAGGGGGCAAAA 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000109627.8 |
||
| 3UTR CCA 72 bp | GTTGCTGGTGACATCTGTGACAACTACATTGGAGCATaGCGACATCTCGGGGCGCCAGTCCCCAGCCTCAGG | + |
|
Preference number: 3 (lower is better) Translates to: VAGDICDNYIGA*RHLGAPVPSLR Trigger: CCTGAGGCTGGGGACTGGCGCCCCGAGATGTCGCCATGCTCCAATGTAGTTGTCACAGATGTCACCAGCAAC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000109623.8 |
||
| 3UTR CCA 72 bp | GACCTTCAAGATGACCATCCCAAGAAGGGCCTGAGGTaGCTCCACGTCCCCCAGCAACCTGGGATCAGAGTG | + |
|
Preference number: 3 (lower is better) Translates to: DLQDDHPKKGLR*LHVPQQPGIRV Trigger: CACTCTGATCCCAGGTTGCTGGGGGACGTGGAGCCACCTCAGGCCCTTCTTGGGATGGTCATCTTGAAGGTC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000109625.8 ENSMUST00000109627.8 |
||
| 3UTR CCA 72 bp | CCTGTCAAGGAAGGAGGACAGCTGTGGCCACCTCTGTaGCGCCTTCTATCCCAGGGAATCCACCAGCTAGCT | + |
|
Preference number: 3 (lower is better) Translates to: PVKEGGQLWPPL*RLLSQGIHQLA Trigger: AGCTAGCTGGTGGATTCCCTGGGATAGAAGGCGCCACAGAGGTGGCCACAGCTGTCCTCCTTCCTTGACAGG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000109627.8 |
||
| 3UTR TCA 72 bp | GATCTGACCTTCAAGATGACCATCCCAAGAAGGGCCTaGGGTGGCTCCACGTCCCCCAGCAACCTGGGATCA | + |
|
Preference number: 3 (lower is better) Translates to: DLTFKMTIPRRA*GGSTSPSNLGS Trigger: TGATCCCAGGTTGCTGGGGGACGTGGAGCCACCTCAGGCCCTTCTTGGGATGGTCATCTTGAAGGTCAGATC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000109625.8 ENSMUST00000109627.8 |
||
| 3UTR GCA 72 bp | GGCTATGTAAGGAGTCTGTGCAGCCTCTGGGCCTCCTaGTCCAGACCATTCAGGAGAGAGAAGAGGGCTGCT | + |
|
Preference number: 3 (lower is better) Translates to: GYVRSLCSLWAS*SRPFRREKRAA Trigger: AGCAGCCCTCTTCTCTCTCCTGAATGGTCTGGAGCAGGAGGCCCAGAGGCTGCACAGACTCCTTACATAGCC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000109627.8 |
||
| 3UTR CCA 72 bp | TGCCACCCTCAATGGTGTCGAGGGAGGGACCCATTTTaGCCTCATCCTTCACTCAGTGCCAGGGTGGTGAGA | + |
|
Preference number: 3 (lower is better) Translates to: CHPQWCRGRDPF*PHPSLSARVVR Trigger: TCTCACCACCCTGGCACTGAGTGAAGGATGAGGCCAAAATGGGTCCCTCCCTCGACACCATTGAGGGTGGCA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000109625.8 ENSMUST00000109627.8 |
||
| 3UTR CCA 72 bp | GCTAGTCTCCCAGTGCCTGGCCTGAATCTGGGGCTTTaGTCTCTGCCATTGGCATGGATGCCTCAGTTCCCT | + |
|
Preference number: 3 (lower is better) Translates to: ASLPVPGLNLGL*SLPLAWMPQFP Trigger: AGGGAACTGAGGCATCCATGCCAATGGCAGAGACCAAAGCCCCAGATTCAGGCCAGGCACTGGGAGACTAGC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000109625.8 ENSMUST00000109627.8 |
||
| 3UTR CCA 72 bp | CAACAGACTCACCCTGTCAAGGAAGGAGGACAGCTGTaGCCACCTCTGTGGCGCCTTCTATCCCAGGGAATC | + |
|
Preference number: 3 (lower is better) Translates to: QQTHPVKEGGQL*PPLWRLLSQGI Trigger: GATTCCCTGGGATAGAAGGCGCCACAGAGGTGGCCACAGCTGTCCTCCTTCCTTGACAGGGTGAGTCTGTTG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000109627.8 |
||
| 3UTR GCA 72 bp | AGTAGGCTGATGATGCAGGGCTATGTAAGGAGTCTGTaGAGCCTCTGGGCCTCCTGCTCCAGACCATTCAGG | + |
|
Preference number: 3 (lower is better) Translates to: SRLMMQGYVRSL*SLWASCSRPFR Trigger: CCTGAATGGTCTGGAGCAGGAGGCCCAGAGGCTGCACAGACTCCTTACATAGCCCTGCATCATCAGCCTACT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000109627.8 |
||
| 3UTR-3UTR CAA 90 bp | CACAGCAGGGATGGATGCCAACCCTCCATCTCAAAACCCAAGACCCAGGACTCAGGCAACAACAGTAAGTaGGGTCCCACTACCGCTGTC | + |
|
Preference number: 3 (lower is better) Translates to: HSRDGCQPSISKPKTQDSGNNSK*GPTTAV Trigger: GACAGCGGTAGTGGGACCCAACTTACTGTTGTTGCC...TGAGTCCTGGGTCTTGGGTTTTGAGATGGAGGGTTGGCATCCATCCCTGCTGTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000109627.8 |
||
| 3UTR-3UTR CAA 90 bp | GCACCGGAACCCAAGGGTAGAACTGACCAGGCTGGGTTCCACCATCCATTAAGTGAGGCCAGTCCATCCTaGACTGACCTTGTTTCTGCC | + |
|
Preference number: 3 (lower is better) Translates to: APEPKGRTDQAGFHHPLSEASPS*TDLVSA Trigger: GGCAGAAACAAGGTCAGTCAAGGATGGACTGGCCTC...ACTTAATGGATGGTGGAACCCAGCCTGGTCAGTTCTACCCTTGGGTTCCGGTGC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000109627.8 |
||
| 3UTR TCA 72 bp | AGCCTCCATACTCCAGTGAAGTATCTCAGCCTCCTTTaGAACGAGGCAACGCCCTCTGATCCACCAGCTCCC | + |
|
Preference number: 3 (lower is better) Translates to: SLHTPVKYLSLL*NEATPSDPPAP Trigger: GGGAGCTGGTGGATCAGAGGGCGTTGCCTCGTTTCAAAGGAGGCTGAGATACTTCACTGGAGTATGGAGGCT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000109627.8 |
||
| 3UTR GCA 72 bp | CCATGGCCAGTCAAGAGTCCCACATTTCCCTTTAAATaGCAGGCCAGCCTGGGCTCTGAAGCCTCCATACTC | + |
|
Preference number: 3 (lower is better) Translates to: PWPVKSPTFPFK*QASLGSEASIL Trigger: GAGTATGGAGGCTTCAGAGCCCAGGCTGGCCTGGCATTTAAAGGGAAATGTGGGACTCTTGACTGGCCATGG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000109627.8 |
||
| 3UTR CCA 72 bp | ATGATGCAGGGCTATGTAAGGAGTCTGTGCAGCCTCTaGGCCTCCTGCTCCAGACCATTCAGGAGAGAGAAG | + |
|
Preference number: 3 (lower is better) Translates to: MMQGYVRSLCSL*ASCSRPFRREK Trigger: CTTCTCTCTCCTGAATGGTCTGGAGCAGGAGGCCCAGAGGCTGCACAGACTCCTTACATAGCCCTGCATCAT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000109627.8 |
||
| 3UTR GCA 72 bp | GACTTAGATCAGGGCAAGAACCACAGCAGGGATGGATaGCAACCCTCCATCTCAAAACCCAAGACCCAGGAC | + |
|
Preference number: 3 (lower is better) Translates to: DLDQGKNHSRDG*QPSISKPKTQD Trigger: GTCCTGGGTCTTGGGTTTTGAGATGGAGGGTTGGCATCCATCCCTGCTGTGGTTCTTGCCCTGATCTAAGTC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000109627.8 |
||
| 3UTR CCA 72 bp | AAACACATTTCTATGGTCTCTGCAAACACCTGTAACTaGCACCCAGGTGGTGGTTCACCTGGGGGAGGGGGA | + |
|
Preference number: 3 (lower is better) Translates to: KHISMVSANTCN*HPGGGSPGGGG Trigger: TCCCCCTCCCCCAGGTGAACCACCACCTGGGTGCCAGTTACAGGTGTTTGCAGAGACCATAGAAATGTGTTT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000109625.8 ENSMUST00000109627.8 |
||
| 3UTR-3UTR CAA 90 bp | CATGCACAGCCAGAAGTTCCTACAGCAGGTTCTTGCAGCACCTTTGGTAGAAAAAGGGAGGGACCCATTTaGGCCTCATCCTTCACTCAG | + |
|
Preference number: 3 (lower is better) Translates to: HAQPEVPTAGSCSTFGRKREGPI*ASSFTQ Trigger: CTGAGTGAAGGATGAGGCCAAAATGGGTCCCTCCCT...TTTTCTACCAAAGGTGCTGCAAGAACCTGCTGTAGGAACTTCTGGCTGTGCATG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000109625.8 ENSMUST00000109627.8 |
||
| 3UTR GCA 72 bp | GATCTACACAAGAAGGAGCCAAGGGGCAAACACACATaGACAGCCAGAAGTTCCTACAGCAGGTTCTTGCAG | + |
|
Preference number: 3 (lower is better) Translates to: DLHKKEPRGKHT*TARSSYSRFLQ Trigger: CTGCAAGAACCTGCTGTAGGAACTTCTGGCTGTGCATGTGTGTTTGCCCCTTGGCTCCTTCTTGTGTAGATC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000109625.8 ENSMUST00000109627.8 |
||
| 3UTR-3UTR CAA 90 bp | GACAATTTATTTGGGGGTGAAGGAGGTTTCACCCCCTTTCCTGGCATCGATACACTTTGGTCTCTGCCATaGGCATGGATGCCTCAGTTC | + |
|
Preference number: 3 (lower is better) Translates to: DNLFGGEGGFTPFPGIDTLWSLP*AWMPQF Trigger: GAACTGAGGCATCCATGCCAATGGCAGAGACCAAAG...TGTATCGATGCCAGGAAAGGGGGTGAAACCTCCTTCACCCCCAAATAAATTGTC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000109627.8 |
||
| 3UTR CCA 72 bp | GCGAAATACCAGCCCTTATTTGGGGGAAAAGCCAATTaGCACTTGGACGGTATGAGAGCTAACACGGGACAA | + |
|
Preference number: 3 (lower is better) Translates to: AKYQPLFGGKAN*HLDGMRANTGQ Trigger: TTGTCCCGTGTTAGCTCTCATACCGTCCAAGTGCCAATTGGCTTTTCCCCCAAATAAGGGCTGGTATTTCGC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000109625.8 ENSMUST00000109627.8 |
||
| 3UTR TCA 72 bp | GAGGTTTCACCCCCTTTCCTGGCATCGATACAATATTaGAGAGCAGCAGAACAAAACGTACAAGACAGAGTG | + |
|
Preference number: 3 (lower is better) Translates to: EVSPPFLASIQY*RAAEQNVQDRV Trigger: CACTCTGTCTTGTACGTTTTGTTCTGCTGCTCTTCAATATTGTATCGATGCCAGGAAAGGGGGTGAAACCTC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000109627.8 |
||
| CDS-3UTR GCA 90 bp | GGTCTGAGGGCAGGGACGGGGTGGGAGCACAAGTATGACTCCAGGAAGGAGGCCCGGTGCCCTGCGCAGTaGTGCCACCTCCCGGACCCT | + |
|
Preference number: 4 (lower is better) Translates to: GLRAGTGWEHKYDSRKEARCPAQ*CHLPDP Trigger: AGGGTCCGGGAGGTGGCAGCACTGCGCAGGGCACCG...GGCCTCCTTCCTGGAGTCATACTTGTGCTCCCACCCCGTCCCTGCCCTCAGACC 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000109625.8 ENSMUST00000109627.8 |
||
| CDS-3UTR CCA 90 bp | CAACTACATTGGAGCATGGCGACATCTCGGGGCGCCAGTCCCCAGCCTCAGGCTCGCTGGAGTGCAGCTTaGGCGAGGAGGCGCTGGCGC | + |
|
Preference number: 4 (lower is better) Translates to: QLHWSMATSRGASPQPQARWSAA*ARRRWR Trigger: GCGCCAGCGCCTCCTCGCCCAAGCTGCACTCCAGCG...AGCCTGAGGCTGGGGACTGGCGCCCCGAGATGTCGCCATGCTCCAATGTAGTTG 67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000109623.8 |
||
| CDS-3UTR CCA 90 bp | GGTCTGAGGGCAGGGACGGGGTGGGAGCACAAGTATGACTCCAGGAAGGAGGCCGGTGCACCGCAGCGCTaGAGTGCAGCTTGGGCGAGG | + |
|
Preference number: 4 (lower is better) Translates to: GLRAGTGWEHKYDSRKEAGAPQR*SAAWAR Trigger: CCTCGCCCAAGCTGCACTCCAGCGCTGCGGTGCACC...GGCCTCCTTCCTGGAGTCATACTTGTGCTCCCACCCCGTCCCTGCCCTCAGACC 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000109623.8 ENSMUST00000109625.8 ENSMUST00000109627.8 |
||
| CDS-3UTR CCA 90 bp | AGGAGGCACCCGCTGGCCGGTGGCAGCCGCCTCAGGAGGGATGGACAGATCGAGGGGCAGCAGATACGGTaGCAGCGGCGGATGTCTTTC | + |
|
Preference number: 4 (lower is better) Translates to: RRHPLAGGSRLRRDGQIEGQQIR*QRRMSF Trigger: GAAAGACATCCGCCGCTGCCACCGTATCTGCTGCCC...CTCGATCTGTCCATCCCTCCTGAGGCGGCTGCCACCGGCCAGCGGGTGCCTCCT 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000109623.8 |
||
| CDS-3UTR GCA 90 bp | CAACTACATTGGAGCATGGCGACATCTCGGGGCGCCAGTCCCCAGCCTCAGGCTACCGCAGCGCTGGAGTaGAGCTTGGGCGAGGAGGCG | + |
|
Preference number: 4 (lower is better) Translates to: QLHWSMATSRGASPQPQATAALE*SLGEEA Trigger: CGCCTCCTCGCCCAAGCTGCACTCCAGCGCTGCGGT...AGCCTGAGGCTGGGGACTGGCGCCCCGAGATGTCGCCATGCTCCAATGTAGTTG 66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000109623.8 |
||
| CDS-3UTR GCA 90 bp | GGCAAGGGAGGCCACGCCTTCAGCGACCCTGTTCTGAGGAACCGTAAAGGGTGTACCGCAGCGCTGGAGTaGAGCTTGGGCGAGGAGGCG | + |
|
Preference number: 4 (lower is better) Translates to: GKGGHAFSDPVLRNRKGCTAALE*SLGEEA Trigger: CGCCTCCTCGCCCAAGCTGCACTCCAGCGCTGCGGT...ACACCCTTTACGGTTCCTCAGAACAGGGTCGCTGAAGGCGTGGCCTCCCTTGCC 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000109625.8 ENSMUST00000109627.8 |
||
| CDS-3UTR GCA 90 bp | GTCCCCAGCCTCAGGCTCGGAGGAGCCAGCACCTGTGGGCTCCAGAGCTGTATGTCTTTCTTGAGCCGGTaGACCGCAGCGCTGGAGTGC | + |
|
Preference number: 4 (lower is better) Translates to: VPSLRLGGASTCGLQSCMSFLSR*TAALEC Trigger: GCACTCCAGCGCTGCGGTGCACCGGCTCAAGAAAGA...CATACAGCTCTGGAGCCCACAGGTGCTGGCTCCTCCGAGCCTGAGGCTGGGGAC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000109623.8 |
||
| CDS-3UTR GCA 90 bp | CATCCTTCACTCAGTGCCAGGGTGGTGAGAGCCTGTGCCCACCCTAGGCGGGATTGCCCTGCGCAGTGCTaGCACCTCCCGGACCCTTGT | + |
|
Preference number: 4 (lower is better) Translates to: HPSLSARVVRACAHPRRDCPAQC*HLPDPC Trigger: ACAAGGGTCCGGGAGGTGGCAGCACTGCGCAGGGCA...ATCCCGCCTAGGGTGGGCACAGGCTCTCACCACCCTGGCACTGAGTGAAGGATG 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000109625.8 ENSMUST00000109627.8 |
||
| CDS-3UTR CCA 90 bp | GCGGCCACCTTCTCAAAATCCTCCGGGCTGCAGAATTCCTTGATGGTCACGGTCCGGAGGGCCTCCGCCTaGGCCCGGGCCTTTAGGAGG | + |
|
Preference number: 4 (lower is better) Translates to: AATFSKSSGLQNSLMVTVRRASA*ARAFRR Trigger: CCTCCTAAAGGCCCGGGCCCAGGCGGAGGCCCTCCG...GACCGTGACCATCAAGGAATTCTGCAGCCCGGAGGATTTTGAGAAGGTGGCCGC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000109623.8 |
||
| CDS-3UTR CCA 90 bp | CTGAGGTGGCTCCACGTCCCCCAGCAACCTGGGATCAGAGTGGCCTGTGGCTTCCAGAAAAGGGCGAGATaGGTGGGCGTAGGCCAGGGC | + |
|
Preference number: 4 (lower is better) Translates to: LRWLHVPQQPGIRVACGFQKRAR*VGVGQG Trigger: GCCCTGGCCTACGCCCACCCATCTCGCCCTTTTCTG...GAAGCCACAGGCCACTCTGATCCCAGGTTGCTGGGGGACGTGGAGCCACCTCAG 64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000109625.8 ENSMUST00000109627.8 |
||
| CDS-3UTR CCA 90 bp | GCAGAGGGCAACAGACGCTGCCCAAGGCACCCGAAGTCTTCCAACAGGCTAGGCTGGGCGAGGAGGCGCTaGCGCTCGGCTTTAGGAGGA | + |
|
Preference number: 4 (lower is better) Translates to: AEGNRRCPRHPKSSNRLGWARRR*RSALGG Trigger: TCCTCCTAAAGCCGAGCGCCAGCGCCTCCTCGCCCA...GCCTAGCCTGTTGGAAGACTTCGGGTGCCTTGGGCAGCGTCTGTTGCCCTCTGC 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000109625.8 |
||
| CDS-3UTR GCA 90 bp | CCCTACCAAGGCCCTAACCAAGTCCAGGGCTACCAGCCCTATCCCTGGGTCAACTGCCCTGCGCAGTGCTaGCACCTCCCGGACCCTTGT | + |
|
Preference number: 4 (lower is better) Translates to: PYQGPNQVQGYQPYPWVNCPAQC*HLPDPC Trigger: ACAAGGGTCCGGGAGGTGGCAGCACTGCGCAGGGCA...GTTGACCCAGGGATAGGGCTGGTAGCCCTGGACTTGGTTAGGGCCTTGGTAGGG 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000109625.8 ENSMUST00000109627.8 |
||
| CDS-3UTR CCA 90 bp | CCGGAACCCAAGGGTAGAACTGACCAGGCTGGGTTCCACCATCCATTAAGTGCACGGAGGGCCTCCGCCTaGGCCCGGGCCTTTAGGAGG | + |
|
Preference number: 4 (lower is better) Translates to: PEPKGRTDQAGFHHPLSARRASA*ARAFRR Trigger: CCTCCTAAAGGCCCGGGCCCAGGCGGAGGCCCTCCG...TGCACTTAATGGATGGTGGAACCCAGCCTGGTCAGTTCTACCCTTGGGTTCCGG 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000109627.8 |
||
| CDS-3UTR TCA 90 bp | CTTTCCCAATCAGGGATGCTCAAAGGTGCCCAGGGCGTTAGGGTGTCTGGGGAGGGACTGCAGTGTGGGTaGGGGGCAGCCGGAAGAGCT | + |
|
Preference number: 4 (lower is better) Translates to: LSQSGMLKGAQGVRVSGEGLQCG*GAAGRA Trigger: AGCTCTTCCGGCTGCCCCTCACCCACACTGCAGTCC...CTCCCCAGACACCCTAACGCCCTGGGCACCTTTGAGCATCCCTGATTGGGAAAG 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000109627.8 |
||
| CDS-3UTR GCA 90 bp | CATCCTTCACTCAGTGCCAGGGTGGTGAGAGCCTGTGCCCACCCTAGGCGGGATTCTTTCTTGAGCCGGTaGACCGCAGCGCTGGAGTGC | + |
|
Preference number: 4 (lower is better) Translates to: HPSLSARVVRACAHPRRDSFLSR*TAALEC Trigger: GCACTCCAGCGCTGCGGTGCACCGGCTCAAGAAAGA...ATCCCGCCTAGGGTGGGCACAGGCTCTCACCACCCTGGCACTGAGTGAAGGATG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000109625.8 ENSMUST00000109627.8 |
||
| CDS-3UTR CCA 90 bp | GCGGCCACCTTCTCAAAATCCTCCGGGCTGCAGAATTCCTTGATGGTCACGGTCGGTGCACCGCAGCGCTaGAGTGCAGCTTGGGCGAGG | + |
|
Preference number: 4 (lower is better) Translates to: AATFSKSSGLQNSLMVTVGAPQR*SAAWAR Trigger: CCTCGCCCAAGCTGCACTCCAGCGCTGCGGTGCACC...GACCGTGACCATCAAGGAATTCTGCAGCCCGGAGGATTTTGAGAAGGTGGCCGC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000109623.8 |
||
| CDS-3UTR CCA 90 bp | GTCCCCCAGCAACCTGGGATCAGAGTGGCCTGTGGCTTCCACGACAAACCGCACTTGTGGGTCTGGTCGTaGCAGGGGACGGCGAGACAT | + |
|
Preference number: 4 (lower is better) Translates to: VPQQPGIRVACGFHDKPHLWVWS*QGTARH Trigger: ATGTCTCGCCGTCCCCTGCCACGACCAGACCCACAA...GTGCGGTTTGTCGTGGAAGCCACAGGCCACTCTGATCCCAGGTTGCTGGGGGAC 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000109625.8 ENSMUST00000109627.8 |
||
| CDS-3UTR CCA 90 bp | GGCAAGGGAGGCCACGCCTTCAGCGACCCTGTTCTGAGGAACCGTAAAGGGTGTCAGAAAAGGGCGAGATaGGTGGGCGTAGGCCAGGGC | + |
|
Preference number: 4 (lower is better) Translates to: GKGGHAFSDPVLRNRKGCQKRAR*VGVGQG Trigger: GCCCTGGCCTACGCCCACCCATCTCGCCCTTTTCTG...ACACCCTTTACGGTTCCTCAGAACAGGGTCGCTGAAGGCGTGGCCTCCCTTGCC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000109625.8 ENSMUST00000109627.8 |
||
| CDS-3UTR CCA 90 bp | GCAGAGGGCAACAGACGCTGCCCAAGGCACCCGAAGTCTTCCAACAGGCTAGGCCCGCCTCAGGAGGGATaGACAGATCGAGCACCTCTG | + |
|
Preference number: 4 (lower is better) Translates to: AEGNRRCPRHPKSSNRLGPPQEG*TDRAPL Trigger: CAGAGGTGCTCGATCTGTCCATCCCTCCTGAGGCGG...GCCTAGCCTGTTGGAAGACTTCGGGTGCCTTGGGCAGCGTCTGTTGCCCTCTGC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000109625.8 ENSMUST00000109627.8 |
||
| 3UTR CAA 72 bp | GGGATGGACAGATCGAGCACCTCTGACTCTCGCCAGTaGGGCACAGATCGGCTCAGGGTCTCCGGGAGTAGC | + |
|
Preference number: 4 (lower is better) Translates to: GMDRSSTSDSRQ*GTDRLRVSGSS Trigger: GCTACTCCCGGAGACCCTGAGCCGATCTGTGCCCAACTGGCGAGAGTCAGAGGTGCTCGATCTGTCCATCCC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000109623.8 |
||
| CDS-3UTR TCA 90 bp | CATCTGCAAGAGGAGGCTGTAGCTGGGCTCTTCCTCTACCAGTCCCCACAGTACGGACTGCAGTGTGGGTaGGGGGCAGCCGGAAGAGCT | + |
|
Preference number: 4 (lower is better) Translates to: HLQEEAVAGLFLYQSPQYGLQCG*GAAGRA Trigger: AGCTCTTCCGGCTGCCCCTCACCCACACTGCAGTCC...GTACTGTGGGGACTGGTAGAGGAAGAGCCCAGCTACAGCCTCCTCTTGCAGATG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000109625.8 ENSMUST00000109627.8 |
||
| CDS-3UTR GCA 90 bp | AGTAGCTTGGGTGGTGCATCGTCTGGGTCAGAGGACTGCAGTGTGGGTGAGGGGTCACCAGGTACTCGATaGGTCCCTTGCGGATCCGGC | + |
|
Preference number: 4 (lower is better) Translates to: SSLGGASSGSEDCSVGEGSPGTR*VPCGSG Trigger: GCCGGATCCGCAAGGGACGCATCGAGTACCTGGTGA...CCCCTCACCCACACTGCAGTCCTCTGACCCAGACGATGCACCACCCAAGCTACT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000109623.8 |
||
| CDS-3UTR GCA 90 bp | TCCTGGGGGCCCTGCAGATGGCGAGATAGCACCGAGACCAAACACTGCACACAGTCACCAGGTACTCGATaGGTCCCTTGCGGATCCGGC | + |
|
Preference number: 4 (lower is better) Translates to: SWGPCRWRDSTETKHCTQSPGTR*VPCGSG Trigger: GCCGGATCCGCAAGGGACGCATCGAGTACCTGGTGA...CTGTGTGCAGTGTTTGGTCTCGGTGCTATCTCGCCATCTGCAGGGCCCCCAGGA 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000109625.8 ENSMUST00000109627.8 |
||
| CDS-3UTR GCA 90 bp | CTGCACCCAACACACACACACGGATCTACACAAGAAGGAGCCAAGGGGCAAACACGGTGCCCTGCGCAGTaGTGCCACCTCCCGGACCCT | + |
|
Preference number: 4 (lower is better) Translates to: LHPTHTHGSTQEGAKGQTRCPAQ*CHLPDP Trigger: AGGGTCCGGGAGGTGGCAGCACTGCGCAGGGCACCG...TGTTTGCCCCTTGGCTCCTTCTTGTGTAGATCCGTGTGTGTGTGTTGGGTGCAG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000109625.8 ENSMUST00000109627.8 |
||
| CDS-3UTR CCA 90 bp | AGGAGGCACCCGCTGGCCGGTGGCAGCCGCCTCAGGAGGGATGGACAGATCGAGCAGAATGTTCTCCTCTaGCTCCCAAGTGCTGTACTT | + |
|
Preference number: 4 (lower is better) Translates to: RRHPLAGGSRLRRDGQIEQNVLL*LPSAVL Trigger: AAGTACAGCACTTGGGAGCCAGAGGAGAACATTCTG...CTCGATCTGTCCATCCCTCCTGAGGCGGCTGCCACCGGCCAGCGGGTGCCTCCT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000109623.8 |
||
| CDS-3UTR CCA 90 bp | GGTCTGAGGGCAGGGACGGGGTGGGAGCACAAGTATGACTCCAGGAAGGAGGCCAGGAGCCAGCACCTGTaGGCTCCAGAGCTGTATGTA | + |
|
Preference number: 4 (lower is better) Translates to: GLRAGTGWEHKYDSRKEARSQHL*APELYV Trigger: TACATACAGCTCTGGAGCCCACAGGTGCTGGCTCCT...GGCCTCCTTCCTGGAGTCATACTTGTGCTCCCACCCCGTCCCTGCCCTCAGACC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000109625.8 ENSMUST00000109627.8 |
||
| 3UTR CAA 72 bp | TTGGGCACAGATCGGCTCAGGGTCTCCGGGAGTAGCTaGGGTGGTGCATCGTCTGGGTCAGAGGACTGCAGT | + |
|
Preference number: 4 (lower is better) Translates to: LGTDRLRVSGSS*GGASSGSEDCS Trigger: ACTGCAGTCCTCTGACCCAGACGATGCACCACCCAAGCTACTCCCGGAGACCCTGAGCCGATCTGTGCCCAA 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000109623.8 |
||
| CDS-3UTR TCA 90 bp | GGGGCTGTGCTGCAGACCCTGGCAGGCAGGCTGGTGAAAGGAAGAGTATCTTCCCCTTCAGGTTCAGGATaGTGCGGTTCCGCTTGGGCT | + |
|
Preference number: 4 (lower is better) Translates to: GAVLQTLAGRLVKGRVSSPSGSG*CGSAWA Trigger: AGCCCAAGCGGAACCGCATCATCCTGAACCTGAAGG...GGAAGATACTCTTCCTTTCACCAGCCTGCCTGCCAGGGTCTGCAGCACAGCCCC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000109625.8 ENSMUST00000109627.8 |
||
| CDS-3UTR TCA 90 bp | GGACCCATTTTGGCCTCATCCTTCACTCAGTGCCAGGGTGGTGAGAGCCTGTGCCAGATCGAGCACCTCTaGCTCTCGCCAGTTGGGCAC | + |
|
Preference number: 4 (lower is better) Translates to: GPILASSFTQCQGGESLCQIEHL*LSPVGH Trigger: GTGCCCAACTGGCGAGAGTCAGAGGTGCTCGATCTG...GCACAGGCTCTCACCACCCTGGCACTGAGTGAAGGATGAGGCCAAAATGGGTCC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000109625.8 ENSMUST00000109627.8 |
||
| CDS-3UTR CCA 90 bp | CTGCACCCAACACACACACACGGATCTACACAAGAAGGAGCCAAGGGGCAAACAGGTGCACCGCAGCGCTaGAGTGCAGCTTGGGCGAGG | + |
|
Preference number: 4 (lower is better) Translates to: LHPTHTHGSTQEGAKGQTGAPQR*SAAWAR Trigger: CCTCGCCCAAGCTGCACTCCAGCGCTGCGGTGCACC...TGTTTGCCCCTTGGCTCCTTCTTGTGTAGATCCGTGTGTGTGTGTTGGGTGCAG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000109625.8 ENSMUST00000109627.8 |
||
| CDS-3UTR CCA 90 bp | ATACAGGAACACTCTGGTCAACGCCCAGGTGAATCCCAGGCAGTGGCCAAGGGCTTGTGGGTCTGGTCGTaGCAGGGGACGGCGAGACAT | + |
|
Preference number: 4 (lower is better) Translates to: IQEHSGQRPGESQAVAKGLWVWS*QGTARH Trigger: ATGTCTCGCCGTCCCCTGCCACGACCAGACCCACAA...GCCCTTGGCCACTGCCTGGGATTCACCTGGGCGTTGACCAGAGTGTTCCTGTAT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000109625.8 ENSMUST00000109627.8 |
||
| CDS-3UTR CCA 90 bp | CTGCACCCAACACACACACACGGATCTACACAAGAAGGAGCCAAGGGGCAAACAACCCCCTTGTGGGTCTaGTCGTGGCAGGGGACGGCG | + |
|
Preference number: 4 (lower is better) Translates to: LHPTHTHGSTQEGAKGQTTPLWV*SWQGTA Trigger: CGCCGTCCCCTGCCACGACCAGACCCACAAGGGGGT...TGTTTGCCCCTTGGCTCCTTCTTGTGTAGATCCGTGTGTGTGTGTTGGGTGCAG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000109625.8 ENSMUST00000109627.8 |
||
| 3UTR CAA 72 bp | CTGCCACCCTCAATGGTGTCGAGGGAGGGACCCATTTaGGCCTCATCCTTCACTCAGTGCCAGGGTGGTGAG | + |
|
Preference number: 4 (lower is better) Translates to: LPPSMVSREGPI*ASSFTQCQGGE Trigger: CTCACCACCCTGGCACTGAGTGAAGGATGAGGCCAAAATGGGTCCCTCCCTCGACACCATTGAGGGTGGCAG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000109625.8 ENSMUST00000109627.8 |
||
| 3UTR CAA 72 bp | CTCCAGACCATTCAGGAGAGAGAAGAGGGCTGCTCATaGGCAGGCTCGCATCTTCCCTGTGCCCGTGCACCT | + |
|
Preference number: 4 (lower is better) Translates to: LQTIQEREEGCS*AGSHLPCARAP Trigger: AGGTGCACGGGCACAGGGAAGATGCGAGCCTGCCAATGAGCAGCCCTCTTCTCTCTCCTGAATGGTCTGGAG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000109627.8 |
||
| CDS-3UTR TCA 90 bp | GTCCCCCAGCAACCTGGGATCAGAGTGGCCTGTGGCTTCCACGACAAACCGCACGGAGCATGCTCTCGCTaGACTTCTTGCTCTTCCCAA | + |
|
Preference number: 4 (lower is better) Translates to: VPQQPGIRVACGFHDKPHGACSR*TSCSSQ Trigger: TTGGGAAGAGCAAGAAGTTCAGCGAGAGCATGCTCC...GTGCGGTTTGTCGTGGAAGCCACAGGCCACTCTGATCCCAGGTTGCTGGGGGAC 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000109625.8 ENSMUST00000109627.8 |
||
| CDS-3UTR GCA 90 bp | TTTCTATGGTCTCTGCAAACACCTGTAACTGGCACCCAGGTGGTGGTTCACCTGACCGCAGCGCTGGAGTaGAGCTTGGGCGAGGAGGCG | + |
|
Preference number: 4 (lower is better) Translates to: FLWSLQTPVTGTQVVVHLTAALE*SLGEEA Trigger: CGCCTCCTCGCCCAAGCTGCACTCCAGCGCTGCGGT...CAGGTGAACCACCACCTGGGTGCCAGTTACAGGTGTTTGCAGAGACCATAGAAA 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000109625.8 ENSMUST00000109627.8 |
||
| CDS-3UTR CCA 90 bp | TCCTGGGGGCCCTGCAGATGGCGAGATAGCACCGAGACCAAACACTGCACACAGTTCATGTGGCGGATCTaGGTACGGAGCATGCTCTCG | + |
|
Preference number: 4 (lower is better) Translates to: SWGPCRWRDSTETKHCTQFMWRI*VRSMLS Trigger: CGAGAGCATGCTCCGTACCCAGATCCGCCACATGAA...CTGTGTGCAGTGTTTGGTCTCGGTGCTATCTCGCCATCTGCAGGGCCCCCAGGA 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000109625.8 ENSMUST00000109627.8 |
||
| CDS-3UTR CCA 90 bp | CACATACAGGAACACTCTGGTCAACGCCCAGGTGAATCCCAGGCAGTGGCCAAGCCGCCTCAGGAGGGATaGACAGATCGAGCACCTCTG | + |
|
Preference number: 4 (lower is better) Translates to: HIQEHSGQRPGESQAVAKPPQEG*TDRAPL Trigger: CAGAGGTGCTCGATCTGTCCATCCCTCCTGAGGCGG...CTTGGCCACTGCCTGGGATTCACCTGGGCGTTGACCAGAGTGTTCCTGTATGTG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000109625.8 ENSMUST00000109627.8 |
||
| CDS-3UTR CCA 90 bp | GGGGCTGTGCTGCAGACCCTGGCAGGCAGGCTGGTGAAAGGAAGAGTATCTTCCAACTACATTGGAGCATaGCGACATCTCGGGGCGCCA | + |
|
Preference number: 4 (lower is better) Translates to: GAVLQTLAGRLVKGRVSSNYIGA*RHLGAP Trigger: TGGCGCCCCGAGATGTCGCCATGCTCCAATGTAGTT...GGAAGATACTCTTCCTTTCACCAGCCTGCCTGCCAGGGTCTGCAGCACAGCCCC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000109625.8 ENSMUST00000109627.8 |
||
| CDS-3UTR TCA 90 bp | CCGGAACCCAAGGGTAGAACTGACCAGGCTGGGTTCCACCATCCATTAAGTGCATCTTGCTCTTCCCAATaGCCCGGTTCCGCGAGGGGA | + |
|
Preference number: 4 (lower is better) Translates to: PEPKGRTDQAGFHHPLSASCSSQ*PGSARG Trigger: TCCCCTCGCGGAACCGGGTCATTGGGAAGAGCAAGA...TGCACTTAATGGATGGTGGAACCCAGCCTGGTCAGTTCTACCCTTGGGTTCCGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000109627.8 |
||
| CDS-3UTR GCA 90 bp | GAAACTGAAGACCCCGGGGAGGTCTCTAGGCCTCCTCTTTCCTCCACAAACATCTCACCAGGTACTCGATaGGTCCCTTGCGGATCCGGC | + |
|
Preference number: 4 (lower is better) Translates to: ETEDPGEVSRPPLSSTNISPGTR*VPCGSG Trigger: GCCGGATCCGCAAGGGACGCATCGAGTACCTGGTGA...GATGTTTGTGGAGGAAAGAGGAGGCCTAGAGACCTCCCCGGGGTCTTCAGTTTC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000109625.8 ENSMUST00000109627.8 |
||
| CDS-3UTR CCA 90 bp | CATGCACAGCCAGAAGTTCCTACAGCAGGTTCTTGCAGCACCTTTGGTAGAAAACGCTGGAGTGCAGCTTaGGCGAGGAGGCGCTGGCGC | + |
|
Preference number: 4 (lower is better) Translates to: HAQPEVPTAGSCSTFGRKRWSAA*ARRRWR Trigger: GCGCCAGCGCCTCCTCGCCCAAGCTGCACTCCAGCG...TTTTCTACCAAAGGTGCTGCAAGAACCTGCTGTAGGAACTTCTGGCTGTGCATG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000109625.8 ENSMUST00000109627.8 |
||
| CDS-3UTR CCA 90 bp | GACAATTTATTTGGGGGTGAAGGAGGTTTCACCCCCTTTCCTGGCATCGATACACGCTGGAGTGCAGCTTaGGCGAGGAGGCGCTGGCGC | + |
|
Preference number: 4 (lower is better) Translates to: DNLFGGEGGFTPFPGIDTRWSAA*ARRRWR Trigger: GCGCCAGCGCCTCCTCGCCCAAGCTGCACTCCAGCG...TGTATCGATGCCAGGAAAGGGGGTGAAACCTCCTTCACCCCCAAATAAATTGTC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000109627.8 |
||
| CDS-3UTR CCA 90 bp | CAGCCCTTATTTGGGGGAAAAGCCAATTGGCACTTGGACGGTATGAGAGCTAACACCCCCTTGTGGGTCTaGTCGTGGCAGGGGACGGCG | + |
|
Preference number: 4 (lower is better) Translates to: QPLFGGKANWHLDGMRANTPLWV*SWQGTA Trigger: CGCCGTCCCCTGCCACGACCAGACCCACAAGGGGGT...GTTAGCTCTCATACCGTCCAAGTGCCAATTGGCTTTTCCCCCAAATAAGGGCTG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt. Matches the following 2 transcripts: ENSMUST00000109625.8 ENSMUST00000109627.8 |
||
| 3UTR CAA 72 bp | GTCAGGAGGTTGCTGGTGACATCTGTGACAACTACATaGGAGCATGGCGACATCTCGGGGCGCCAGTCCCCA | + |
|
Preference number: 4 (lower is better) Translates to: VRRLLVTSVTTT*EHGDISGRQSP Trigger: TGGGGACTGGCGCCCCGAGATGTCGCCATGCTCCAATGTAGTTGTCACAGATGTCACCAGCAACCTCCTGAC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000109623.8 |
||
| 3UTR CAA 72 bp | TGGGTGCCTTCCTGGGGGAAAGGCAACAACAGTAAGTaGGGTCCCACTACCGCTGTCCACTTGTCCCCTGCA | + |
|
Preference number: 4 (lower is better) Translates to: WVPSWGKGNNSK*GPTTAVHLSPA Trigger: TGCAGGGGACAAGTGGACAGCGGTAGTGGGACCCAACTTACTGTTGTTGCCTTTCCCCCAGGAAGGCACCCA 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000109627.8 |
||
| CDS-3UTR TCA 90 bp | CACCCAACACACACACACGGATCTACACAAGAAGGAGCCAAGGGGCAAACACACTCTTGCTCTTCCCAATaGCCCGGTTCCGCGAGGGGA | + |
|
Preference number: 4 (lower is better) Translates to: HPTHTHGSTQEGAKGQTHSCSSQ*PGSARG Trigger: TCCCCTCGCGGAACCGGGTCATTGGGAAGAGCAAGA...GTGTGTTTGCCCCTTGGCTCCTTCTTGTGTAGATCCGTGTGTGTGTGTTGGGTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000109625.8 ENSMUST00000109627.8 |
||
| CDS-3UTR TCA 90 bp | CACACGGATCTACACAAGAAGGAGCCAAGGGGCAAACACACATGCACAGCCAGACAGATCGAGCACCTCTaGCTCTCGCCAGTTGGGCAC | + |
|
Preference number: 4 (lower is better) Translates to: HTDLHKKEPRGKHTCTARQIEHL*LSPVGH Trigger: GTGCCCAACTGGCGAGAGTCAGAGGTGCTCGATCTG...TCTGGCTGTGCATGTGTGTTTGCCCCTTGGCTCCTTCTTGTGTAGATCCGTGTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000109625.8 ENSMUST00000109627.8 |
||
| CDS-3UTR GCA 90 bp | CCACGTCCCCCAGCAACCTGGGATCAGAGTGGCCTGTGGCTTCCACGACAAACCTGTAGAGCGCAAATGTaGCAAACTTCATGTGGCGGA | + |
|
Preference number: 4 (lower is better) Translates to: PRPPATWDQSGLWLPRQTCRAQM*QTSCGG Trigger: TCCGCCACATGAAGTTTGGCACATTTGCGCTCTACA...GGTTTGTCGTGGAAGCCACAGGCCACTCTGATCCCAGGTTGCTGGGGGACGTGG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000109625.8 ENSMUST00000109627.8 |
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| CDS-3UTR CCA 90 bp | CATCTGCAAGAGGAGGCTGTAGCTGGGCTCTTCCTCTACCAGTCCCCACAGTACAACTACATTGGAGCATaGCGACATCTCGGGGCGCCA | + |
|
Preference number: 4 (lower is better) Translates to: HLQEEAVAGLFLYQSPQYNYIGA*RHLGAP Trigger: TGGCGCCCCGAGATGTCGCCATGCTCCAATGTAGTT...GTACTGTGGGGACTGGTAGAGGAAGAGCCCAGCTACAGCCTCCTCTTGCAGATG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000109625.8 ENSMUST00000109627.8 |
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| CDS-3UTR GCA 90 bp | GGGGCTGTGCTGCAGACCCTGGCAGGCAGGCTGGTGAAAGGAAGAGTATCTTCCTGTAGAGCGCAAATGTaGCAAACTTCATGTGGCGGA | + |
|
Preference number: 4 (lower is better) Translates to: GAVLQTLAGRLVKGRVSSCRAQM*QTSCGG Trigger: TCCGCCACATGAAGTTTGGCACATTTGCGCTCTACA...GGAAGATACTCTTCCTTTCACCAGCCTGCCTGCCAGGGTCTGCAGCACAGCCCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000109625.8 ENSMUST00000109627.8 |
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| CDS-3UTR CCA 90 bp | TTTCTATGGTCTCTGCAAACACCTGTAACTGGCACCCAGGTGGTGGTTCACCTGCGGCGAGACATACGGTaGCAGCGGCGGATGTCTTTC | + |
|
Preference number: 4 (lower is better) Translates to: FLWSLQTPVTGTQVVVHLRRDIR*QRRMSF Trigger: GAAAGACATCCGCCGCTGCCACCGTATGTCTCGCCG...CAGGTGAACCACCACCTGGGTGCCAGTTACAGGTGTTTGCAGAGACCATAGAAA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000109625.8 ENSMUST00000109627.8 |
||
| CDS-3UTR CCA 90 bp | CACACGGATCTACACAAGAAGGAGCCAAGGGGCAAACACACATGCACAGCCAGATTCATGTGGCGGATCTaGGTACGGAGCATGCTCTCG | + |
|
Preference number: 4 (lower is better) Translates to: HTDLHKKEPRGKHTCTARFMWRI*VRSMLS Trigger: CGAGAGCATGCTCCGTACCCAGATCCGCCACATGAA...TCTGGCTGTGCATGTGTGTTTGCCCCTTGGCTCCTTCTTGTGTAGATCCGTGTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000109625.8 ENSMUST00000109627.8 |
||
| 3UTR CAA 72 bp | GCCACCTTCTCAAAATCCTCCGGGCTGCAGAATTCCTaGATGGTCACGGTCAGGAGGTTGCTGGTGACATCT | + |
|
Preference number: 4 (lower is better) Translates to: ATFSKSSGLQNS*MVTVRRLLVTS Trigger: AGATGTCACCAGCAACCTCCTGACCGTGACCATCAAGGAATTCTGCAGCCCGGAGGATTTTGAGAAGGTGGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000109623.8 |
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| CDS-3UTR GCA 90 bp | AAATCCTCCGGGCTGCAGAATTCCTTGATGGTCACGGTCAGGAGGTTGCTGGTGGGCTTGACAGAGAAATaGACATCACTGATGCGGAGG | + |
|
Preference number: 4 (lower is better) Translates to: KSSGLQNSLMVTVRRLLVGLTEK*TSLMRR Trigger: CCTCCGCATCAGTGATGTGCATTTCTCTGTCAAGCC...CACCAGCAACCTCCTGACCGTGACCATCAAGGAATTCTGCAGCCCGGAGGATTT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000109623.8 |
||
| CDS-3UTR GCA 90 bp | GAAACTGAAGACCCCGGGGAGGTCTCTAGGCCTCCTCTTTCCTCCACAAACATCGGCTTGACAGAGAAATaGACATCACTGATGCGGAGG | + |
|
Preference number: 4 (lower is better) Translates to: ETEDPGEVSRPPLSSTNIGLTEK*TSLMRR Trigger: CCTCCGCATCAGTGATGTGCATTTCTCTGTCAAGCC...GATGTTTGTGGAGGAAAGAGGAGGCCTAGAGACCTCCCCGGGGTCTTCAGTTTC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000109627.8 |
||
| CDS-3UTR GCA 90 bp | TTATTTGGGGGAAAAGCCAATTGGCACTTGGACGGTATGAGAGCTAACACGGGATCTTTCTTGAGCCGGTaGACCGCAGCGCTGGAGTGC | + |
|
Preference number: 4 (lower is better) Translates to: LFGGKANWHLDGMRANTGSFLSR*TAALEC Trigger: GCACTCCAGCGCTGCGGTGCACCGGCTCAAGAAAGA...TCCCGTGTTAGCTCTCATACCGTCCAAGTGCCAATTGGCTTTTCCCCCAAATAA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000109625.8 ENSMUST00000109627.8 |
||
| CDS-3UTR CCA 90 bp | CATGCACAGCCAGAAGTTCCTACAGCAGGTTCTTGCAGCACCTTTGGTAGAAAACGGCGAGACATACGGTaGCAGCGGCGGATGTCTTTC | + |
|
Preference number: 4 (lower is better) Translates to: HAQPEVPTAGSCSTFGRKRRDIR*QRRMSF Trigger: GAAAGACATCCGCCGCTGCCACCGTATGTCTCGCCG...TTTTCTACCAAAGGTGCTGCAAGAACCTGCTGTAGGAACTTCTGGCTGTGCATG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000109625.8 ENSMUST00000109627.8 |
||
| CDS-3UTR TCA 90 bp | TTATTTGGGGGAAAAGCCAATTGGCACTTGGACGGTATGAGAGCTAACACGGGACCTTCAGGTTCAGGATaGTGCGGTTCCGCTTGGGCT | + |
|
Preference number: 4 (lower is better) Translates to: LFGGKANWHLDGMRANTGPSGSG*CGSAWA Trigger: AGCCCAAGCGGAACCGCATCATCCTGAACCTGAAGG...TCCCGTGTTAGCTCTCATACCGTCCAAGTGCCAATTGGCTTTTCCCCCAAATAA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000109625.8 ENSMUST00000109627.8 |
||
| CDS-3UTR CCA 90 bp | GCACCGGAACCCAAGGGTAGAACTGACCAGGCTGGGTTCCACCATCCATTAAGTCAGAATGTTCTCCTCTaGCTCCCAAGTGCTGTACTT | + |
|
Preference number: 4 (lower is better) Translates to: APEPKGRTDQAGFHHPLSQNVLL*LPSAVL Trigger: AAGTACAGCACTTGGGAGCCAGAGGAGAACATTCTG...ACTTAATGGATGGTGGAACCCAGCCTGGTCAGTTCTACCCTTGGGTTCCGGTGC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000109627.8 |
||
| CDS-3UTR TCA 90 bp | CATGCACAGCCAGAAGTTCCTACAGCAGGTTCTTGCAGCACCTTTGGTAGAAAAGGCTGCAGAATTCCTTaGTGGTCACGGTCAGGAGGT | + |
|
Preference number: 4 (lower is better) Translates to: HAQPEVPTAGSCSTFGRKGCRIP*WSRSGG Trigger: ACCTCCTGACCGTGACCATCAAGGAATTCTGCAGCC...TTTTCTACCAAAGGTGCTGCAAGAACCTGCTGTAGGAACTTCTGGCTGTGCATG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000109625.8 ENSMUST00000109627.8 |
||
| CDS-3UTR TCA 90 bp | GACAATTTATTTGGGGGTGAAGGAGGTTTCACCCCCTTTCCTGGCATCGATACAGGCTGCAGAATTCCTTaGTGGTCACGGTCAGGAGGT | + |
|
Preference number: 4 (lower is better) Translates to: DNLFGGEGGFTPFPGIDTGCRIP*WSRSGG Trigger: ACCTCCTGACCGTGACCATCAAGGAATTCTGCAGCC...TGTATCGATGCCAGGAAAGGGGGTGAAACCTCCTTCACCCCCAAATAAATTGTC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000109627.8 |
||
| CDS-3UTR GCA 90 bp | TTCCTTGATGGTCACGGTCAGGAGGTTGCTGGTGACATCTGTGACAACTACATTCTTCTGCTCGAAGGCTaGGATGAGCCTCGAATCCAG | + |
|
Preference number: 4 (lower is better) Translates to: FLDGHGQEVAGDICDNYILLLEG*DEPRIQ Trigger: CTGGATTCGAGGCTCATCGCAGCCTTCGAGCAGAAG...AATGTAGTTGTCACAGATGTCACCAGCAACCTCCTGACCGTGACCATCAAGGAA 51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000109623.8 |
||
| CDS-3UTR GCA 90 bp | CATGCACAGCCAGAAGTTCCTACAGCAGGTTCTTGCAGCACCTTTGGTAGAAAACTTCTGCTCGAAGGCTaGGATGAGCCTCGAATCCAG | + |
|
Preference number: 4 (lower is better) Translates to: HAQPEVPTAGSCSTFGRKLLLEG*DEPRIQ Trigger: CTGGATTCGAGGCTCATCGCAGCCTTCGAGCAGAAG...TTTTCTACCAAAGGTGCTGCAAGAACCTGCTGTAGGAACTTCTGGCTGTGCATG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000109625.8 ENSMUST00000109627.8 |
||
| CDS-3UTR CCA 90 bp | GACAATTTATTTGGGGGTGAAGGAGGTTTCACCCCCTTTCCTGGCATCGATACAAGGAGCCAGCACCTGTaGGCTCCAGAGCTGTATGTA | + |
|
Preference number: 4 (lower is better) Translates to: DNLFGGEGGFTPFPGIDTRSQHL*APELYV Trigger: TACATACAGCTCTGGAGCCCACAGGTGCTGGCTCCT...TGTATCGATGCCAGGAAAGGGGGTGAAACCTCCTTCACCCCCAAATAAATTGTC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000109627.8 |
||
| 3UTR CAA 72 bp | GGGCTGCAGAATTCCTTGATGGTCACGGTCAGGAGGTaGCTGGTGACATCTGTGACAACTACATTGGAGCAT | + |
|
Preference number: 4 (lower is better) Translates to: GLQNSLMVTVRR*LVTSVTTTLEH Trigger: ATGCTCCAATGTAGTTGTCACAGATGTCACCAGCAACCTCCTGACCGTGACCATCAAGGAATTCTGCAGCCC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000109623.8 |
||
| CDS-3UTR CCA 90 bp | TTATTTGGGGGAAAAGCCAATTGGCACTTGGACGGTATGAGAGCTAACACGGGACAGAATGTTCTCCTCTaGCTCCCAAGTGCTGTACTT | + |
|
Preference number: 4 (lower is better) Translates to: LFGGKANWHLDGMRANTGQNVLL*LPSAVL Trigger: AAGTACAGCACTTGGGAGCCAGAGGAGAACATTCTG...TCCCGTGTTAGCTCTCATACCGTCCAAGTGCCAATTGGCTTTTCCCCCAAATAA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000109625.8 ENSMUST00000109627.8 |
||
| 3UTR CAA 72 bp | GGAGGTTTCACCCCCTTTCCTGGCATCGATACAATATaGAAGAGCAGCAGAACAAAACGTACAAGACAGAGT | + |
|
Preference number: 4 (lower is better) Translates to: GGFTPFPGIDTI*KSSRTKRTRQS Trigger: ACTCTGTCTTGTACGTTTTGTTCTGCTGCTCTTCAATATTGTATCGATGCCAGGAAAGGGGGTGAAACCTCC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000109627.8 |
||
| CDS GCA 90 bp | CTTCCCAATGACCCGGTTCCGCGAGGGGACTTTCGGGCGGGCCAGTaGCCCGGTGCCCTGCGCAGTGCTGCCACCTCCCGGACCCTTGTC | + |
|
Preference number: 5 (lower is better) Translates to: LPNDPVPRGDFRAGQ*PGALRSAATSRTLV Trigger: GACAAGGGTCCGGGAGGTGGCAGCACTGCGCAGGGCACCGGGGCACTGGCCCGCCCGAAAGTCCCCTCGCGGAACCGGGTCATTGGGAAG 71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000109625.8 ENSMUST00000109627.8 |
||
| CDS GCA 90 bp | GCGAGGGGACTTTCGGGCGGGCCAGTGCCCCGGTGCCCTGCGCAGTaGTGCCACCTCCCGGACCCTTGTCAATCACCTTCAGGTTCAGGA | + |
|
Preference number: 5 (lower is better) Translates to: ARGLSGGPVPRCPAQ*CHLPDPCQSPSGSG Trigger: TCCTGAACCTGAAGGTGATTGACAAGGGTCCGGGAGGTGGCAGCACTGCGCAGGGCACCGGGGCACTGGCCCGCCCGAAAGTCCCCTCGC 68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000109625.8 ENSMUST00000109627.8 |
||
| CDS GCA 90 bp | CAGCGGCGGATGTCTTTCTTGAGCCGGTGCACCGCAGCGCTGGAGTaGAGCTTGGGCGAGGAGGCGCTGGCGCTCGGCTTGACAGAGAAA | + |
|
Preference number: 5 (lower is better) Translates to: QRRMSFLSRCTAALE*SLGEEALALGLTEK Trigger: TTTCTCTGTCAAGCCGAGCGCCAGCGCCTCCTCGCCCAAGCTGCACTCCAGCGCTGCGGTGCACCGGCTCAAGAAAGACATCCGCCGCTG 66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000109623.8 ENSMUST00000109627.8 ENSMUST00000148358.2 |
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| CDS GCA 90 bp | CAGCGGCGGATGTCTTTCTTGAGCCGGTGCACCGCAGCGCTGGAGTaGAGCTTGGGCGAGGAGGCGCTGGCGCTCGGCTTTAGGAGGAAA | + |
|
Preference number: 5 (lower is better) Translates to: QRRMSFLSRCTAALE*SLGEEALALGFRRK Trigger: TTTCCTCCTAAAGCCGAGCGCCAGCGCCTCCTCGCCCAAGCTGCACTCCAGCGCTGCGGTGCACCGGCTCAAGAAAGACATCCGCCGCTG 66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000109625.8 |
||
| CDS-3UTR CAA 90 bp | GCCGCCTCAGGAGGGATGGACAGATCGAGCACCTCTGACTCTCGCCAGTTGGGCCGGCGGATGTCTTTCTaGAGCCGGTGCACCGCAGCG | + |
|
Preference number: 5 (lower is better) Translates to: AASGGMDRSSTSDSRQLGRRMSF*SRCTAA Trigger: CGCTGCGGTGCACCGGCTCAAGAAAGACATCCGCCG...GCCCAACTGGCGAGAGTCAGAGGTGCTCGATCTGTCCATCCCTCCTGAGGCGGC 66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000109623.8 |
||
| CDS-3UTR CAA 90 bp | TGGCCTGTGGCTTCCACGACAAACCGCACAGACTGGACTGTGCCAGGCCTGGCTATGATGCGGTTCCGCTaGGGCTCCCGGGGCTTCACC | + |
|
Preference number: 5 (lower is better) Translates to: WPVASTTNRTDWTVPGLAMMRFR*GSRGFT Trigger: GGTGAAGCCCCGGGAGCCCAAGCGGAACCGCATCAT...AGCCAGGCCTGGCACAGTCCAGTCTGTGCGGTTTGTCGTGGAAGCCACAGGCCA 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000109625.8 ENSMUST00000109627.8 |
||
| CDS-3UTR CAA 90 bp | CCACGTCCCCCAGCAACCTGGGATCAGAGTGGCCTGTGGCTTCCACGACAAACCATGATGCGGTTCCGCTaGGGCTCCCGGGGCTTCACC | + |
|
Preference number: 5 (lower is better) Translates to: PRPPATWDQSGLWLPRQTMMRFR*GSRGFT Trigger: GGTGAAGCCCCGGGAGCCCAAGCGGAACCGCATCAT...GGTTTGTCGTGGAAGCCACAGGCCACTCTGATCCCAGGTTGCTGGGGGACGTGG 64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000109625.8 ENSMUST00000109627.8 |
||
| CDS-3UTR CAA 90 bp | GGCAAGGGAGGCCACGCCTTCAGCGACCCTGTTCTGAGGAACCGTAAAGGGTGTCGGCGGATGTCTTTCTaGAGCCGGTGCACCGCAGCG | + |
|
Preference number: 5 (lower is better) Translates to: GKGGHAFSDPVLRNRKGCRRMSF*SRCTAA Trigger: CGCTGCGGTGCACCGGCTCAAGAAAGACATCCGCCG...ACACCCTTTACGGTTCCTCAGAACAGGGTCGCTGAAGGCGTGGCCTCCCTTGCC 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000109625.8 ENSMUST00000109627.8 |
||
| CDS-3UTR CAA 90 bp | CAGTCCCCAGCCTCAGGCTCGGAGGAGCCAGCACCTGTGGGCTCCAGAGCTGTATTAGGTCCCCTCTTCTaGGGCCCATACAGCTCACGT | + |
|
Preference number: 5 (lower is better) Translates to: QSPASGSEEPAPVGSRAVLGPLF*GPYSSR Trigger: ACGTGAGCTGTATGGGCCCAAGAAGAGGGGACCTAA...TACAGCTCTGGAGCCCACAGGTGCTGGCTCCTCCGAGCCTGAGGCTGGGGACTG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000109623.8 |
||
| CDS-3UTR CAA 90 bp | CCAGCACCTGTGGGCTCCAGAGCTGTATGTAGCGCCTGGTCCGCAGCACCAGTGGCGCTGGCGCTCGGCTaGACAGAGAAATGCACATCA | + |
|
Preference number: 5 (lower is better) Translates to: PAPVGSRAVCSAWSAAPVALALG*TEKCTS Trigger: TGATGTGCATTTCTCTGTCAAGCCGAGCGCCAGCGC...CACTGGTGCTGCGGACCAGGCGCTACATACAGCTCTGGAGCCCACAGGTGCTGG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000109623.8 |
||
| CDS-3UTR CAA 90 bp | CCCTCAGGCTGGGCACCTGTAGTGCTTCATGCTGCCTTGCCACCCTGTCCAGCCGCGCTGGCGCTCGGCTaGACAGAGAAATGCACATCA | + |
|
Preference number: 5 (lower is better) Translates to: PSGWAPVVLHAALPPCPAALALG*TEKCTS Trigger: TGATGTGCATTTCTCTGTCAAGCCGAGCGCCAGCGC...GGCTGGACAGGGTGGCAAGGCAGCATGAAGCACTACAGGTGCCCAGCCTGAGGG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000109627.8 |
||
| CDS-3UTR CAA 90 bp | CCCTCAGGCTGGGCACCTGTAGTGCTTCATGCTGCCTTGCCACCCTGTCCAGCCGGCTTCACCTTACGGTaGATGATGCGCACGGTCTCA | + |
|
Preference number: 5 (lower is better) Translates to: PSGWAPVVLHAALPPCPAGFTLR*MMRTVS Trigger: TGAGACCGTGCGCATCATCAACCGTAAGGTGAAGCC...GGCTGGACAGGGTGGCAAGGCAGCATGAAGCACTACAGGTGCCCAGCCTGAGGG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000109627.8 |
||
| CDS-3UTR CAA 90 bp | TGGCCTGTGGCTTCCACGACAAACCGCACAGACTGGACTGTGCCAGGCCTGGCTGGGCTGCAGAATTCCTaGATGGTCACGGTCAGGAGG | + |
|
Preference number: 5 (lower is better) Translates to: WPVASTTNRTDWTVPGLAGLQNS*MVTVRR Trigger: CCTCCTGACCGTGACCATCAAGGAATTCTGCAGCCC...AGCCAGGCCTGGCACAGTCCAGTCTGTGCGGTTTGTCGTGGAAGCCACAGGCCA 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000109625.8 ENSMUST00000109627.8 |
||
| CDS-3UTR CAA 90 bp | GCAGAGGGCAACAGACGCTGCCCAAGGCACCCGAAGTCTTCCAACAGGCTAGGCTTAGGTCCCCTCTTCTaGGGCCCATACAGCTCACGT | + |
|
Preference number: 5 (lower is better) Translates to: AEGNRRCPRHPKSSNRLGLGPLF*GPYSSR Trigger: ACGTGAGCTGTATGGGCCCAAGAAGAGGGGACCTAA...GCCTAGCCTGTTGGAAGACTTCGGGTGCCTTGGGCAGCGTCTGTTGCCCTCTGC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000109625.8 ENSMUST00000109627.8 |
||
| CDS-3UTR CAA 90 bp | CATCCTTCACTCAGTGCCAGGGTGGTGAGAGCCTGTGCCCACCCTAGGCGGGATGTCACGGTCAGGAGGTaGCTGGTGACATCTGTGACA | + |
|
Preference number: 5 (lower is better) Translates to: HPSLSARVVRACAHPRRDVTVRR*LVTSVT Trigger: TGTCACAGATGTCACCAGCAACCTCCTGACCGTGAC...ATCCCGCCTAGGGTGGGCACAGGCTCTCACCACCCTGGCACTGAGTGAAGGATG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000109625.8 ENSMUST00000109627.8 |
||
| CDS-3UTR CAA 90 bp | CACACGGATCTACACAAGAAGGAGCCAAGGGGCAAACACACATGCACAGCCAGACGGCGGATGTCTTTCTaGAGCCGGTGCACCGCAGCG | + |
|
Preference number: 5 (lower is better) Translates to: HTDLHKKEPRGKHTCTARRRMSF*SRCTAA Trigger: CGCTGCGGTGCACCGGCTCAAGAAAGACATCCGCCG...TCTGGCTGTGCATGTGTGTTTGCCCCTTGGCTCCTTCTTGTGTAGATCCGTGTG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000109625.8 ENSMUST00000109627.8 |
||
| CDS-3UTR CAA 90 bp | GGCTCGGAGGAGCCAGCACCTGTGGGCTCCAGAGCTGTATGTAGCGCCTGGTCCTTTAGGAGGAAAGTTTaGGGTTTAGGTCCCCTCTTC | + |
|
Preference number: 5 (lower is better) Translates to: GSEEPAPVGSRAVCSAWSFRRKV*GLGPLF Trigger: GAAGAGGGGACCTAAACCCAAAACTTTCCTCCTAAA...GGACCAGGCGCTACATACAGCTCTGGAGCCCACAGGTGCTGGCTCCTCCGAGCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000109623.8 |
||
| CDS-3UTR CAA 90 bp | CCTGGCCTGAATCTGGGGCTTTGGTCTCTGCCATTGGCATGGATGCCTCAGTTCGTCACGGTCAGGAGGTaGCTGGTGACATCTGTGACA | + |
|
Preference number: 5 (lower is better) Translates to: PGLNLGLWSLPLAWMPQFVTVRR*LVTSVT Trigger: TGTCACAGATGTCACCAGCAACCTCCTGACCGTGAC...GAACTGAGGCATCCATGCCAATGGCAGAGACCAAAGCCCCAGATTCAGGCCAGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000109625.8 ENSMUST00000109627.8 |
||
| CDS-3UTR CAA 90 bp | GAAACTGAAGACCCCGGGGAGGTCTCTAGGCCTCCTCTTTCCTCCACAAACATCGGGCTGCAGAATTCCTaGATGGTCACGGTCAGGAGG | + |
|
Preference number: 5 (lower is better) Translates to: ETEDPGEVSRPPLSSTNIGLQNS*MVTVRR Trigger: CCTCCTGACCGTGACCATCAAGGAATTCTGCAGCCC...GATGTTTGTGGAGGAAAGAGGAGGCCTAGAGACCTCCCCGGGGTCTTCAGTTTC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000109625.8 ENSMUST00000109627.8 |
||
| CDS-3UTR CAA 90 bp | TGGCCTGTGGCTTCCACGACAAACCGCACAGACTGGACTGTGCCAGGCCTGGCTTTTAGGAGGAAAGTTTaGGGTTTAGGTCCCCTCTTC | + |
|
Preference number: 5 (lower is better) Translates to: WPVASTTNRTDWTVPGLAFRRKV*GLGPLF Trigger: GAAGAGGGGACCTAAACCCAAAACTTTCCTCCTAAA...AGCCAGGCCTGGCACAGTCCAGTCTGTGCGGTTTGTCGTGGAAGCCACAGGCCA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000109625.8 ENSMUST00000109627.8 |
||
| CDS-3UTR CAA 90 bp | CACCCAACACACACACACGGATCTACACAAGAAGGAGCCAAGGGGCAAACACACTTAGGTCCCCTCTTCTaGGGCCCATACAGCTCACGT | + |
|
Preference number: 5 (lower is better) Translates to: HPTHTHGSTQEGAKGQTHLGPLF*GPYSSR Trigger: ACGTGAGCTGTATGGGCCCAAGAAGAGGGGACCTAA...GTGTGTTTGCCCCTTGGCTCCTTCTTGTGTAGATCCGTGTGTGTGTGTTGGGTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000109625.8 ENSMUST00000109627.8 |
||
| CDS-3UTR CAA 90 bp | CACACGGATCTACACAAGAAGGAGCCAAGGGGCAAACACACATGCACAGCCAGAGGCTTCACCTTACGGTaGATGATGCGCACGGTCTCA | + |
|
Preference number: 5 (lower is better) Translates to: HTDLHKKEPRGKHTCTARGFTLR*MMRTVS Trigger: TGAGACCGTGCGCATCATCAACCGTAAGGTGAAGCC...TCTGGCTGTGCATGTGTGTTTGCCCCTTGGCTCCTTCTTGTGTAGATCCGTGTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000109625.8 ENSMUST00000109627.8 |
||
| CDS-3UTR CAA 90 bp | CACACGGATCTACACAAGAAGGAGCCAAGGGGCAAACACACATGCACAGCCAGACTCTCGCTGAACTTCTaGCTCTTCCCAATGACCCGG | + |
|
Preference number: 5 (lower is better) Translates to: HTDLHKKEPRGKHTCTARLSLNF*LFPMTR Trigger: CCGGGTCATTGGGAAGAGCAAGAAGTTCAGCGAGAG...TCTGGCTGTGCATGTGTGTTTGCCCCTTGGCTCCTTCTTGTGTAGATCCGTGTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000109625.8 ENSMUST00000109627.8 |
||
| CDS-3UTR CAA 90 bp | CTGCACCCAACACACACACACGGATCTACACAAGAAGGAGCCAAGGGGCAAACACTCTCGCTGAACTTCTaGCTCTTCCCAATGACCCGG | + |
|
Preference number: 5 (lower is better) Translates to: LHPTHTHGSTQEGAKGQTLSLNF*LFPMTR Trigger: CCGGGTCATTGGGAAGAGCAAGAAGTTCAGCGAGAG...TGTTTGCCCCTTGGCTCCTTCTTGTGTAGATCCGTGTGTGTGTGTTGGGTGCAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000109625.8 ENSMUST00000109627.8 |
||
| CDS-3UTR CAA 90 bp | CCTGGCCTGAATCTGGGGCTTTGGTCTCTGCCATTGGCATGGATGCCTCAGTTCTCTGTGACAACTACATaGGAGCATGGCGACATCTCG | + |
|
Preference number: 5 (lower is better) Translates to: PGLNLGLWSLPLAWMPQFSVTTT*EHGDIS Trigger: CGAGATGTCGCCATGCTCCAATGTAGTTGTCACAGA...GAACTGAGGCATCCATGCCAATGGCAGAGACCAAAGCCCCAGATTCAGGCCAGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000109625.8 ENSMUST00000109627.8 |
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| CDS-3UTR CAA 90 bp | TTTCTATGGTCTCTGCAAACACCTGTAACTGGCACCCAGGTGGTGGTTCACCTGTCTGTGACAACTACATaGGAGCATGGCGACATCTCG | + |
|
Preference number: 5 (lower is better) Translates to: FLWSLQTPVTGTQVVVHLSVTTT*EHGDIS Trigger: CGAGATGTCGCCATGCTCCAATGTAGTTGTCACAGA...CAGGTGAACCACCACCTGGGTGCCAGTTACAGGTGTTTGCAGAGACCATAGAAA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000109625.8 ENSMUST00000109627.8 |
||
| CDS GCA 72 bp | GACCCGGTTCCGCGAGGGGACTTTCGGGCGGGCCAGTaGCCCGGTGCCCTGCGCAGTGCTGCCACCTCCCGG | + |
|
Preference number: 6 (lower is better) Translates to: DPVPRGDFRAGQ*PGALRSAATSR Trigger: CCGGGAGGTGGCAGCACTGCGCAGGGCACCGGGGCACTGGCCCGCCCGAAAGTCCCCTCGCGGAACCGGGTC 76% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000109625.8 ENSMUST00000109627.8 |
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| CDS CAA 72 bp | AGGAGCAGCCCAGGCCCCGAGGAGGCCACATCGGCTTaGCCCGCAGTAGAGGGCGCCAGAGGGGCAGGAGGG | + |
|
Preference number: 6 (lower is better) Translates to: RSSPGPEEATSA*PAVEGARGAGG Trigger: CCCTCCTGCCCCTCTGGCGCCCTCTACTGCGGGCAAAGCCGATGTGGCCTCCTCGGGGCCTGGGCTGCTCCT 72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000109625.8 ENSMUST00000109627.8 |
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| CDS GCA 72 bp | GAGGGGACTTTCGGGCGGGCCAGTGCCCCGGTGCCCTaGGCAGTGCTGCCACCTCCCGGACCCTTGTCAATC | + |
|
Preference number: 6 (lower is better) Translates to: EGTFGRASAPVP*AVLPPPGPLSI Trigger: GATTGACAAGGGTCCGGGAGGTGGCAGCACTGCGCAGGGCACCGGGGCACTGGCCCGCCCGAAAGTCCCCTC 71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000109625.8 ENSMUST00000109627.8 |
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| CDS CAA 90 bp | GGCAGGGGACGGCGAGACATACGGTGGCAGCGGCGGATGTCTTTCTaGAGCCGGTGCACCGCAGCGCTGGAGTGCAGCTTGGGCGAGGAG | + |
|
Preference number: 6 (lower is better) Translates to: GRGRRDIRWQRRMSF*SRCTAALECSLGEE Trigger: CTCCTCGCCCAAGCTGCACTCCAGCGCTGCGGTGCACCGGCTCAAGAAAGACATCCGCCGCTGCCACCGTATGTCTCGCCGTCCCCTGCC 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000109625.8 ENSMUST00000109627.8 ENSMUST00000148358.2 |
||
| CDS GCA 72 bp | CTTTCGGGCGGGCCAGTGCCCCGGTGCCCTGCGCAGTaGTGCCACCTCCCGGACCCTTGTCAATCACCTTCA | + |
|
Preference number: 6 (lower is better) Translates to: LSGGPVPRCPAQ*CHLPDPCQSPS Trigger: TGAAGGTGATTGACAAGGGTCCGGGAGGTGGCAGCACTGCGCAGGGCACCGGGGCACTGGCCCGCCCGAAAG 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000109625.8 ENSMUST00000109627.8 |
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| CDS CCA 72 bp | GGGTCTGGTCGTGGCAGGGGACGGCGAGACATACGGTaGCAGCGGCGGATGTCTTTCTTGAGCCGGTGCACC | + |
|
Preference number: 6 (lower is better) Translates to: GSGRGRGRRDIR*QRRMSFLSRCT Trigger: GGTGCACCGGCTCAAGAAAGACATCCGCCGCTGCCACCGTATGTCTCGCCGTCCCCTGCCACGACCAGACCC 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000109625.8 ENSMUST00000109627.8 ENSMUST00000148358.2 |
||
| CDS CCA 72 bp | AGGACTGCAGTGTGGGTGAGGGGCAGCCGGAAGAGCTaGAGCTGTGTGCGTCAAAGGGGGCAGCAGCTGGGG | + |
|
Preference number: 6 (lower is better) Translates to: RTAVWVRGSRKS*SCVRQRGQQLG Trigger: CCCCAGCTGCTGCCCCCTTTGACGCACACAGCTCCAGCTCTTCCGGCTGCCCCTCACCCACACTGCAGTCCT 67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000109625.8 ENSMUST00000109627.8 |
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| CDS GCA 72 bp | ATGTCTTTCTTGAGCCGGTGCACCGCAGCGCTGGAGTaGAGCTTGGGCGAGGAGGCGCTGGCGCTCGGCTTT | + |
|
Preference number: 6 (lower is better) Translates to: MSFLSRCTAALE*SLGEEALALGF Trigger: AAAGCCGAGCGCCAGCGCCTCCTCGCCCAAGCTGCACTCCAGCGCTGCGGTGCACCGGCTCAAGAAAGACAT 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000109625.8 |
||
| CDS CAA 72 bp | CGGCGAGACATACGGTGGCAGCGGCGGATGTCTTTCTaGAGCCGGTGCACCGCAGCGCTGGAGTGCAGCTTG | + |
|
Preference number: 6 (lower is better) Translates to: RRDIRWQRRMSF*SRCTAALECSL Trigger: CAAGCTGCACTCCAGCGCTGCGGTGCACCGGCTCAAGAAAGACATCCGCCGCTGCCACCGTATGTCTCGCCG 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000109625.8 ENSMUST00000109627.8 ENSMUST00000148358.2 |
||
| CDS CAA 72 bp | GGGCAGCAGATACGGTGGCAGCGGCGGATGTCTTTCTaGAGCCGGTGCACCGCAGCGCTGGAGTGCAGCTTG | + |
|
Preference number: 6 (lower is better) Translates to: GQQIRWQRRMSF*SRCTAALECSL Trigger: CAAGCTGCACTCCAGCGCTGCGGTGCACCGGCTCAAGAAAGACATCCGCCGCTGCCACCGTATCTGCTGCCC 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000109623.8 |
||
| CDS CAA 72 bp | GAGTGCAGCTTGGGCGAGGAGGCGCTGGCGCTCGGCTaGACAGAGAAATGCACATCACTGATGCGGAGGGCC | + |
|
Preference number: 6 (lower is better) Translates to: ECSLGEEALALG*TEKCTSLMRRA Trigger: GGCCCTCCGCATCAGTGATGTGCATTTCTCTGTCAAGCCGAGCGCCAGCGCCTCCTCGCCCAAGCTGCACTC 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000109623.8 ENSMUST00000109627.8 ENSMUST00000148358.2 |
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| CDS CAA 90 bp | CGGATGTCTTTCTTGAGCCGGTGCACCGCAGCGCTGGAGTGCAGCTaGGGCGAGGAGGCGCTGGCGCTCGGCTTGACAGAGAAATGCACA | + |
|
Preference number: 6 (lower is better) Translates to: RMSFLSRCTAALECS*GEEALALGLTEKCT Trigger: TGTGCATTTCTCTGTCAAGCCGAGCGCCAGCGCCTCCTCGCCCAAGCTGCACTCCAGCGCTGCGGTGCACCGGCTCAAGAAAGACATCCG 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000109623.8 ENSMUST00000109627.8 ENSMUST00000148358.2 |
||
| CDS CAA 90 bp | CGGATGTCTTTCTTGAGCCGGTGCACCGCAGCGCTGGAGTGCAGCTaGGGCGAGGAGGCGCTGGCGCTCGGCTTTAGGAGGAAAGTTTTG | + |
|
Preference number: 6 (lower is better) Translates to: RMSFLSRCTAALECS*GEEALALGFRRKVL Trigger: CAAAACTTTCCTCCTAAAGCCGAGCGCCAGCGCCTCCTCGCCCAAGCTGCACTCCAGCGCTGCGGTGCACCGGCTCAAGAAAGACATCCG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000109625.8 |
||
| CDS CAA 90 bp | AGGATGATGCGGTTCCGCTTGGGCTCCCGGGGCTTCACCTTACGGTaGATGATGCGCACGGTCTCAGAAAAGGGCGAGATGGGTGGGCGT | + |
|
Preference number: 6 (lower is better) Translates to: RMMRFRLGSRGFTLR*MMRTVSEKGEMGGR Trigger: ACGCCCACCCATCTCGCCCTTTTCTGAGACCGTGCGCATCATCAACCGTAAGGTGAAGCCCCGGGAGCCCAAGCGGAACCGCATCATCCT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000109625.8 ENSMUST00000109627.8 |
||
| CDS TCA 72 bp | CTCCCGGACCCTTGTCAATCACCTTCAGGTTCAGGATaGTGCGGTTCCGCTTGGGCTCCCGGGGCTTCACCT | + |
|
Preference number: 6 (lower is better) Translates to: LPDPCQSPSGSG*CGSAWAPGASP Trigger: AGGTGAAGCCCCGGGAGCCCAAGCGGAACCGCATCATCCTGAACCTGAAGGTGATTGACAAGGGTCCGGGAG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000109625.8 ENSMUST00000109627.8 |
||
| CDS CAA 72 bp | GCCTCCGCCTGGGCCCGGGCCTTTAGGAGGAAAGTTTaGGGTTTAGGTCCCCTCTTCTTGGGCCCATACAGC | + |
|
Preference number: 6 (lower is better) Translates to: ASAWARAFRRKV*GLGPLFLGPYS Trigger: GCTGTATGGGCCCAAGAAGAGGGGACCTAAACCCAAAACTTTCCTCCTAAAGGCCCGGGCCCAGGCGGAGGC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000109623.8 ENSMUST00000109627.8 |
||
| CDS CAA 72 bp | CGGTTCCGCTTGGGCTCCCGGGGCTTCACCTTACGGTaGATGATGCGCACGGTCTCAGAAAAGGGCGAGATG | + |
|
Preference number: 6 (lower is better) Translates to: RFRLGSRGFTLR*MMRTVSEKGEM Trigger: CATCTCGCCCTTTTCTGAGACCGTGCGCATCATCAACCGTAAGGTGAAGCCCCGGGAGCCCAAGCGGAACCG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000109625.8 ENSMUST00000109627.8 |
||
| CDS CAA 90 bp | TTCATGTGGCGGATCTGGGTACGGAGCATGCTCTCGCTGAACTTCTaGCTCTTCCCAATGACCCGGTTCCGCGAGGGGACTTTCGGGCGG | + |
|
Preference number: 6 (lower is better) Translates to: FMWRIWVRSMLSLNF*LFPMTRFREGTFGR Trigger: CCGCCCGAAAGTCCCCTCGCGGAACCGGGTCATTGGGAAGAGCAAGAAGTTCAGCGAGAGCATGCTCCGTACCCAGATCCGCCACATGAA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000109625.8 ENSMUST00000109627.8 |
||
| CDS CAA 72 bp | CGGATCTGGGTACGGAGCATGCTCTCGCTGAACTTCTaGCTCTTCCCAATGACCCGGTTCCGCGAGGGGACT | + |
|
Preference number: 6 (lower is better) Translates to: RIWVRSMLSLNF*LFPMTRFREGT Trigger: AGTCCCCTCGCGGAACCGGGTCATTGGGAAGAGCAAGAAGTTCAGCGAGAGCATGCTCCGTACCCAGATCCG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000109625.8 ENSMUST00000109627.8 |
||
| CDS CAA 90 bp | GGACCCTTGTCAATCACCTTCAGGTTCAGGATGATGCGGTTCCGCTaGGGCTCCCGGGGCTTCACCTTACGGTTGATGATGCGCACGGTC | + |
|
Preference number: 6 (lower is better) Translates to: GPLSITFRFRMMRFR*GSRGFTLRLMMRTV Trigger: GACCGTGCGCATCATCAACCGTAAGGTGAAGCCCCGGGAGCCCAAGCGGAACCGCATCATCCTGAACCTGAAGGTGATTGACAAGGGTCC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000109625.8 ENSMUST00000109627.8 |
||
| CDS CAA 72 bp | GAGGAGGCGCTGGCGCTCGGCTTTAGGAGGAAAGTTTaGGGTTTAGGTCCCCTCTTCTTGGGCCCATACAGC | + |
|
Preference number: 6 (lower is better) Translates to: EEALALGFRRKV*GLGPLFLGPYS Trigger: GCTGTATGGGCCCAAGAAGAGGGGACCTAAACCCAAAACTTTCCTCCTAAAGCCGAGCGCCAGCGCCTCCTC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000109625.8 |
||
| CDS CAA 72 bp | TCAATCACCTTCAGGTTCAGGATGATGCGGTTCCGCTaGGGCTCCCGGGGCTTCACCTTACGGTTGATGATG | + |
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Preference number: 6 (lower is better) Translates to: SITFRFRMMRFR*GSRGFTLRLMM Trigger: CATCATCAACCGTAAGGTGAAGCCCCGGGAGCCCAAGCGGAACCGCATCATCCTGAACCTGAAGGTGATTGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000109625.8 ENSMUST00000109627.8 |
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