Pregenerated sensors for CBS (Mus musculus)
Ensembl gene IDs: ENSMUSG00000024039Ensembl transcript IDs: ENSMUST00000067801.14, ENSMUST00000078509.12, ENSMUST00000118504.9, ENSMUST00000128351.9, ENSMUST00000135425.9, ENSMUST00000151718.3, ENSMUST00000155814.8, ENSMUST00000236853.2, ENSMUST00000236909.2
Found 187 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | GAGGAGTGGGCTAAGCAGGGTCATGGCCCAGGTGGTGACACTTTGTaGAGGCACTTCACAGCTGTGGGTCTCAGGTCACAGAAGCCCACC | + |
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Preference number: 1 (lower is better) Translates to: EEWAKQGHGPGGDTL*RHFTAVGLRSQKPT Trigger: GGTGGGCTTCTGTGACCTGAGACCCACAGCTGTGAAGTGCCTGCACAAAGTGTCACCACCTGGGCCATGACCCTGCTTAGCCCACTCCTC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000067801.14 ENSMUST00000078509.12 ENSMUST00000118504.9 ENSMUST00000236853.2 |
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| 3UTR GCA 90 bp | AGTCACATATGGCTGGGACCTGCATGGAGCCTGGGACTGGTTGGATaGAGCAGCTCACTGCCAAAGTCTGGTGGTGGCAGGTCCTCTGCT | + |
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Preference number: 1 (lower is better) Translates to: SHIWLGPAWSLGLVG*SSSLPKSGGGRSSA Trigger: AGCAGAGGACCTGCCACCACCAGACTTTGGCAGTGAGCTGCTGCATCCAACCAGTCCCAGGCTCCATGCAGGTCCCAGCCATATGTGACT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000236853.2 |
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| 3UTR CCA 90 bp | GACAGAAAGTGGGTGCTTGTCAGGGAAGGAGTGGGACGTGAGGAGTaGGCTAAGCAGGGTCATGGCCCAGGTGGTGACACTTTGTGCAGG | + |
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Preference number: 1 (lower is better) Translates to: DRKWVLVREGVGREE*AKQGHGPGGDTLCR Trigger: CCTGCACAAAGTGTCACCACCTGGGCCATGACCCTGCTTAGCCCACTCCTCACGTCCCACTCCTTCCCTGACAAGCACCCACTTTCTGTC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000067801.14 ENSMUST00000078509.12 ENSMUST00000118504.9 ENSMUST00000236853.2 |
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| 3UTR TCA 90 bp | AGGGCAGGACCACAGGAAAGAGGGATAACCAAGGCTGGGGAAGACTaGGAATGGTGCCCAGAGGCACACAGGCAAGCATGTGAAACTGCA | + |
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Preference number: 1 (lower is better) Translates to: RAGPQERGITKAGED*EWCPEAHRQACETA Trigger: TGCAGTTTCACATGCTTGCCTGTGTGCCTCTGGGCACCATTCTCAGTCTTCCCCAGCCTTGGTTATCCCTCTTTCCTGTGGTCCTGCCCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000236853.2 |
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| 3UTR TCA 90 bp | GGCCACAGGGAGGTTGAACCTATCCCGGGCTACATAGCAAGACCCTaGACCTGCGCACCAAAGCCAAGTCCCTCCTCTAAGTACAGAAAC | + |
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Preference number: 1 (lower is better) Translates to: GHREVEPIPGYIARP*TCAPKPSPSSKYRN Trigger: GTTTCTGTACTTAGAGGAGGGACTTGGCTTTGGTGCGCAGGTTCAGGGTCTTGCTATGTAGCCCGGGATAGGTTCAACCTCCCTGTGGCC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000236853.2 |
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| 3UTR GCA 90 bp | ACGAAGACAAGCCATGGGTGGAGCACATGGGAGATGATGTATAGTTaGTGGACAACAAACCCAAACCACAGGGCAGGGCAGGACCACAGG | + |
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Preference number: 1 (lower is better) Translates to: TKTSHGWSTWEMMYS*WTTNPNHRAGQDHR Trigger: CCTGTGGTCCTGCCCTGCCCTGTGGTTTGGGTTTGTTGTCCAGCAACTATACATCATCTCCCATGTGCTCCACCCATGGCTTGTCTTCGT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000236853.2 |
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| 3UTR CCA 90 bp | GTCATGGCCCAGGTGGTGACACTTTGTGCAGGCACTTCACAGCTGTaGGTCTCAGGTCACAGAAGCCCACCTTCATTTAAAACCCACACA | + |
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Preference number: 1 (lower is better) Translates to: VMAQVVTLCAGTSQL*VSGHRSPPSFKTHT Trigger: TGTGTGGGTTTTAAATGAAGGTGGGCTTCTGTGACCTGAGACCCACAGCTGTGAAGTGCCTGCACAAAGTGTCACCACCTGGGCCATGAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000067801.14 ENSMUST00000078509.12 ENSMUST00000118504.9 ENSMUST00000236853.2 |
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| 3UTR CCA 90 bp | GGTATGGGACTCAGTTATACTCTTCCCTCCCTGTCTTTTCCTGTCTaGCCTCCTGATGTTCTGGAGGTCTGGAGTGACCTGAGCTCAAGG | + |
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Preference number: 1 (lower is better) Translates to: GMGLSYTLPSLSFPV*PPDVLEVWSDLSSR Trigger: CCTTGAGCTCAGGTCACTCCAGACCTCCAGAACATCAGGAGGCCAGACAGGAAAAGACAGGGAGGGAAGAGTATAACTGAGTCCCATACC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000236853.2 |
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| 3UTR GCA 90 bp | CATCCCATACTCCATCTTTCCTGTTCCTGTCTGCTGCATCCTCCCTaGCAACTCTCAACTAACACTGCTTATCTTCCTCGGAGCATGGGC | + |
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Preference number: 1 (lower is better) Translates to: HPILHLSCSCLLHPP*QLSTNTAYLPRSMG Trigger: GCCCATGCTCCGAGGAAGATAAGCAGTGTTAGTTGAGAGTTGGCAGGGAGGATGCAGCAGACAGGAACAGGAAAGATGGAGTATGGGATG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000236853.2 |
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| 3UTR CCA 90 bp | GTACACTGTAGCTGTACAGATGGTTGTAAGCCTTCATGTGGTTGCTaGGAATTAAATTCAGGACCTCTGTTTGCTCTGGCCCTGTTTGCT | + |
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Preference number: 1 (lower is better) Translates to: VHCSCTDGCKPSCGC*ELNSGPLFALALFA Trigger: AGCAAACAGGGCCAGAGCAAACAGAGGTCCTGAATTTAATTCCCAGCAACCACATGAAGGCTTACAACCATCTGTACAGCTACAGTGTAC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000236853.2 |
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| 3UTR-3UTR GCA 90 bp | TCCCATGCTAGGGCTAACCAGGTCCCTGAGGATGTCCACACAATCAGTCCAAGGGTTAGGAGGGGAGGGTaGTGGCCTCAGCAGCCACCT | + |
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Preference number: 2 (lower is better) Translates to: SHARANQVPEDVHTISPRVRRGG*WPQQPP Trigger: AGGTGGCTGCTGAGGCCAGCACCCTCCCCTCCTAAC...CCTTGGACTGATTGTGTGGACATCCTCAGGGACCTGGTTAGCCCTAGCATGGGA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000067801.14 ENSMUST00000078509.12 ENSMUST00000118504.9 ENSMUST00000236853.2 |
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| 3UTR-3UTR CCA 90 bp | CCAGGTGGTGACACTTTGTGCAGGCACTTCACAGCTGTGGGTCTCAGGTCACAGGCCACCTGCTGGACTTaGGTGAGGAAGCTGGTAGGT | + |
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Preference number: 2 (lower is better) Translates to: PGGDTLCRHFTAVGLRSQATCWT*VRKLVG Trigger: ACCTACCAGCTTCCTCACCCAAGTCCAGCAGGTGGC...CTGTGACCTGAGACCCACAGCTGTGAAGTGCCTGCACAAAGTGTCACCACCTGG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000067801.14 ENSMUST00000078509.12 ENSMUST00000118504.9 ENSMUST00000236853.2 |
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| 3UTR-3UTR CCA 90 bp | GGGAGATCCATTGAGACAGAAAGTGGGTGCTTGTCAGGGAAGGAGTGGGACGTGTGCCCTTTCCCACGATaGAGCCCTCTGTGGGGAGGA | + |
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Preference number: 2 (lower is better) Translates to: GRSIETESGCLSGKEWDVCPFPR*SPLWGG Trigger: TCCTCCCCACAGAGGGCTCCATCGTGGGAAAGGGCA...CACGTCCCACTCCTTCCCTGACAAGCACCCACTTTCTGTCTCAATGGATCTCCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000067801.14 ENSMUST00000078509.12 ENSMUST00000118504.9 ENSMUST00000236853.2 |
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| 3UTR-3UTR GCA 90 bp | CCAGAACAGGGAGATCCATTGAGACAGAAAGTGGGTGCTTGTCAGGGAAGGAGTGTTAGGAGGGGAGGGTaGTGGCCTCAGCAGCCACCT | + |
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Preference number: 2 (lower is better) Translates to: PEQGDPLRQKVGACQGRSVRRGG*WPQQPP Trigger: AGGTGGCTGCTGAGGCCAGCACCCTCCCCTCCTAAC...ACTCCTTCCCTGACAAGCACCCACTTTCTGTCTCAATGGATCTCCCTGTTCTGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000067801.14 ENSMUST00000078509.12 ENSMUST00000118504.9 ENSMUST00000236853.2 |
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| 3UTR-3UTR CCA 90 bp | TCCCATGCTAGGGCTAACCAGGTCCCTGAGGATGTCCACACAATCAGTCCAAGGTCAGCAGCCACCTGCTaGACTTGGGTGAGGAAGCTG | + |
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Preference number: 2 (lower is better) Translates to: SHARANQVPEDVHTISPRSAATC*TWVRKL Trigger: CAGCTTCCTCACCCAAGTCCAGCAGGTGGCTGCTGA...CCTTGGACTGATTGTGTGGACATCCTCAGGGACCTGGTTAGCCCTAGCATGGGA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000067801.14 ENSMUST00000078509.12 ENSMUST00000118504.9 ENSMUST00000236853.2 |
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| 3UTR-3UTR TCA 90 bp | TGGCCTCGAACTCAGAAATCTGCCTGCCTCTGCCTCCTGAGTGCTGGGATTAAAAAGGCTGGGGAAGACTaGGAATGGTGCCCAGAGGCA | + |
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Preference number: 2 (lower is better) Translates to: WPRTQKSACLCLLSAGIKKAGED*EWCPEA Trigger: TGCCTCTGGGCACCATTCTCAGTCTTCCCCAGCCTT...TTTAATCCCAGCACTCAGGAGGCAGAGGCAGGCAGATTTCTGAGTTCGAGGCCA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000236853.2 |
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| 3UTR-3UTR GCA 90 bp | TCTCAGGTCACAGAAGCCCACCTTCATTTAAAACCCACACACTCCCATGCTAGGGCCTCAGCAGCCACCTaGTGGACTTGGGTGAGGAAG | + |
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Preference number: 2 (lower is better) Translates to: SQVTEAHLHLKPTHSHARASAAT*WTWVRK Trigger: CTTCCTCACCCAAGTCCAGCAGGTGGCTGCTGAGGC...CCTAGCATGGGAGTGTGTGGGTTTTAAATGAAGGTGGGCTTCTGTGACCTGAGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000067801.14 ENSMUST00000078509.12 ENSMUST00000118504.9 ENSMUST00000236853.2 |
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| 3UTR-3UTR CCA 90 bp | TCTCAGGTCACAGAAGCCCACCTTCATTTAAAACCCACACACTCCCATGCTAGGTGCCCTTTCCCACGATaGAGCCCTCTGTGGGGAGGA | + |
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Preference number: 2 (lower is better) Translates to: SQVTEAHLHLKPTHSHARCPFPR*SPLWGG Trigger: TCCTCCCCACAGAGGGCTCCATCGTGGGAAAGGGCA...CCTAGCATGGGAGTGTGTGGGTTTTAAATGAAGGTGGGCTTCTGTGACCTGAGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000067801.14 ENSMUST00000078509.12 ENSMUST00000118504.9 ENSMUST00000236853.2 |
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| 3UTR-3UTR CCA 90 bp | ATTAAATTCAGGACCTCTGTTTGCTCTGGCCCTGTTTGCTCCCGCCCAAAGATCTGCCCTTTCCCACGATaGAGCCCTCTGTGGGGAGGA | + |
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Preference number: 2 (lower is better) Translates to: IKFRTSVCSGPVCSRPKICPFPR*SPLWGG Trigger: TCCTCCCCACAGAGGGCTCCATCGTGGGAAAGGGCA...GATCTTTGGGCGGGAGCAAACAGGGCCAGAGCAAACAGAGGTCCTGAATTTAAT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000236853.2 |
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| 3UTR-3UTR TCA 90 bp | AGATCCATTGAGACAGAAAGTGGGTGCTTGTCAGGGAAGGAGTGGGACGTGAGGCATTCCTCAGTTCTGTaGCACCAGAGGAAAGGCCCT | + |
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Preference number: 2 (lower is better) Translates to: RSIETESGCLSGKEWDVRHSSVL*HQRKGP Trigger: AGGGCCTTTCCTCTGGTGTCACAGAACTGAGGAATG...CCTCACGTCCCACTCCTTCCCTGACAAGCACCCACTTTCTGTCTCAATGGATCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000067801.14 ENSMUST00000078509.12 ENSMUST00000118504.9 ENSMUST00000236853.2 |
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| 3UTR-3UTR TCA 90 bp | ACAGGTTTGACCTCAGCAAAACTAAGTGAGGATAAGCTTGGCAGAGGTGGCCACACACAGGCAAGCATGTaGAACTGCAGCCCAGTGCGG | + |
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Preference number: 2 (lower is better) Translates to: TGLTSAKLSEDKLGRGGHTQASM*NCSPVR Trigger: CCGCACTGGGCTGCAGTTTCACATGCTTGCCTGTGT...GTGGCCACCTCTGCCAAGCTTATCCTCACTTAGTTTTGCTGAGGTCAAACCTGT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000236853.2 |
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| 3UTR-3UTR GCA 90 bp | GGGAGATCCATTGAGACAGAAAGTGGGTGCTTGTCAGGGAAGGAGTGGGACGTGAATCAGTCCAAGGTTTaGCCTTTCCCACGATGGAGC | + |
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Preference number: 2 (lower is better) Translates to: GRSIETESGCLSGKEWDVNQSKV*PFPRWS Trigger: GCTCCATCGTGGGAAAGGGCAAACCTTGGACTGATT...CACGTCCCACTCCTTCCCTGACAAGCACCCACTTTCTGTCTCAATGGATCTCCC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000067801.14 ENSMUST00000078509.12 ENSMUST00000118504.9 ENSMUST00000236853.2 |
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| 3UTR-3UTR CCA 90 bp | TCTCAGGTCACAGAAGCCCACCTTCATTTAAAACCCACACACTCCCATGCTAGGGCCACCTGCTGGACTTaGGTGAGGAAGCTGGTAGGT | + |
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Preference number: 2 (lower is better) Translates to: SQVTEAHLHLKPTHSHARATCWT*VRKLVG Trigger: ACCTACCAGCTTCCTCACCCAAGTCCAGCAGGTGGC...CCTAGCATGGGAGTGTGTGGGTTTTAAATGAAGGTGGGCTTCTGTGACCTGAGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000067801.14 ENSMUST00000078509.12 ENSMUST00000118504.9 ENSMUST00000236853.2 |
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| 3UTR-3UTR GCA 90 bp | CACGACCACAGGTATGTGATTCCATTTATAGGAAGAGTCCAGAACAGGGAGATCGCCTCAGCAGCCACCTaGTGGACTTGGGTGAGGAAG | + |
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Preference number: 2 (lower is better) Translates to: HDHRYVIPFIGRVQNREIASAAT*WTWVRK Trigger: CTTCCTCACCCAAGTCCAGCAGGTGGCTGCTGAGGC...GATCTCCCTGTTCTGGACTCTTCCTATAAATGGAATCACATACCTGTGGTCGTG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000067801.14 ENSMUST00000236853.2 |
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| 3UTR-3UTR GCA 90 bp | GGGAGATCCATTGAGACAGAAAGTGGGTGCTTGTCAGGGAAGGAGTGGGACGTGCACCCTGAGTCTTGTTaGTATTGTAGTCTGTGCCCA | + |
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Preference number: 2 (lower is better) Translates to: GRSIETESGCLSGKEWDVHPESC*YCSLCP Trigger: TGGGCACAGACTACAATAGCAACAAGACTCAGGGTG...CACGTCCCACTCCTTCCCTGACAAGCACCCACTTTCTGTCTCAATGGATCTCCC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000067801.14 ENSMUST00000078509.12 ENSMUST00000118504.9 ENSMUST00000236853.2 |
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| 3UTR-3UTR GCA 90 bp | TGGCCTCGAACTCAGAAATCTGCCTGCCTCTGCCTCCTGAGTGCTGGGATTAAAAATCAGTCCAAGGTTTaGCCTTTCCCACGATGGAGC | + |
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Preference number: 2 (lower is better) Translates to: WPRTQKSACLCLLSAGIKNQSKV*PFPRWS Trigger: GCTCCATCGTGGGAAAGGGCAAACCTTGGACTGATT...TTTAATCCCAGCACTCAGGAGGCAGAGGCAGGCAGATTTCTGAGTTCGAGGCCA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000236853.2 |
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| 3UTR-3UTR TCA 90 bp | TGTGGGTCTCAGGTCACAGAAGCCCACCTTCATTTAAAACCCACACACTCCCATCATTCCTCAGTTCTGTaGCACCAGAGGAAAGGCCCT | + |
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Preference number: 2 (lower is better) Translates to: CGSQVTEAHLHLKPTHSHHSSVL*HQRKGP Trigger: AGGGCCTTTCCTCTGGTGTCACAGAACTGAGGAATG...ATGGGAGTGTGTGGGTTTTAAATGAAGGTGGGCTTCTGTGACCTGAGACCCACA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000067801.14 ENSMUST00000078509.12 ENSMUST00000118504.9 ENSMUST00000236853.2 |
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| 3UTR-3UTR TCA 90 bp | TATGAGTACACTGTAGCTGTACAGATGGTTGTAAGCCTTCATGTGGTTGCTGGGTGTGGGTCCCAGGAATaGAACTCAGGTCGCCAGGCT | + |
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Preference number: 2 (lower is better) Translates to: YEYTVAVQMVVSLHVVAGCGSQE*NSGRQA Trigger: AGCCTGGCGACCTGAGTTTCATTCCTGGGACCCACA...CCCAGCAACCACATGAAGGCTTACAACCATCTGTACAGCTACAGTGTACTCATA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000236853.2 |
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| 3UTR-3UTR GCA 90 bp | TCCATTTATAGGAAGAGTCCAGAACAGGGAGATCCATTGAGACAGAAAGTGGGTGCCTCAGCAGCCACCTaGTGGACTTGGGTGAGGAAG | + |
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Preference number: 2 (lower is better) Translates to: SIYRKSPEQGDPLRQKVGASAAT*WTWVRK Trigger: CTTCCTCACCCAAGTCCAGCAGGTGGCTGCTGAGGC...ACCCACTTTCTGTCTCAATGGATCTCCCTGTTCTGGACTCTTCCTATAAATGGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000067801.14 ENSMUST00000078509.12 ENSMUST00000118504.9 ENSMUST00000236853.2 |
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| 3UTR-3UTR GCA 90 bp | GCTTACCATCCCATACTCCATCTTTCCTGTTCCTGTCTGCTGCATCCTCCCTGCCTCTCTTCTCTTAAATaGAGCAGTGGGTACCACTCC | + |
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Preference number: 2 (lower is better) Translates to: AYHPILHLSCSCLLHPPCLSSLK*SSGYHS Trigger: GGAGTGGTACCCACTGCTGCATTTAAGAGAAGAGAG...GCAGGGAGGATGCAGCAGACAGGAACAGGAAAGATGGAGTATGGGATGGTAAGC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000236853.2 |
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| 3UTR-3UTR CCA 90 bp | TATGAGTACACTGTAGCTGTACAGATGGTTGTAAGCCTTCATGTGGTTGCTGGGTCAGCAGCCACCTGCTaGACTTGGGTGAGGAAGCTG | + |
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Preference number: 2 (lower is better) Translates to: YEYTVAVQMVVSLHVVAGSAATC*TWVRKL Trigger: CAGCTTCCTCACCCAAGTCCAGCAGGTGGCTGCTGA...CCCAGCAACCACATGAAGGCTTACAACCATCTGTACAGCTACAGTGTACTCATA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000236853.2 |
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| 3UTR-3UTR CCA 90 bp | AGATCCATTGAGACAGAAAGTGGGTGCTTGTCAGGGAAGGAGTGGGACGTGAGGTGTGCCCATCCTTCCTaGCTAACATTCCTCAGTTCT | + |
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Preference number: 2 (lower is better) Translates to: RSIETESGCLSGKEWDVRCAHPS*LTFLSS Trigger: AGAACTGAGGAATGTTAGCCAGGAAGGATGGGCACA...CCTCACGTCCCACTCCTTCCCTGACAAGCACCCACTTTCTGTCTCAATGGATCT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000067801.14 ENSMUST00000078509.12 ENSMUST00000118504.9 ENSMUST00000236853.2 |
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| 3UTR-3UTR CCA 90 bp | TTTGTGGCATTATCTATACCAGGGTTGCCATTCTGTGTTCCCTTGTCTAAGCCAACTGGCTGCTGGGAGTaGCCCTCTGGAAGAACACCG | + |
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Preference number: 2 (lower is better) Translates to: FVALSIPGLPFCVPLSKPTGCWE*PSGRTP Trigger: CGGTGTTCTTCCAGAGGGCCACTCCCAGCAGCCAGT...TGGCTTAGACAAGGGAACACAGAATGGCAACCCTGGTATAGATAATGCCACAAA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000236853.2 |
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| 3UTR-3UTR GCA 90 bp | CATTTAAAACCCACACACTCCCATGCTAGGGCTAACCAGGTCCCTGAGGATGTCCACCCTGAGTCTTGTTaGTATTGTAGTCTGTGCCCA | + |
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Preference number: 2 (lower is better) Translates to: HLKPTHSHARANQVPEDVHPESC*YCSLCP Trigger: TGGGCACAGACTACAATAGCAACAAGACTCAGGGTG...GACATCCTCAGGGACCTGGTTAGCCCTAGCATGGGAGTGTGTGGGTTTTAAATG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000067801.14 ENSMUST00000078509.12 ENSMUST00000118504.9 ENSMUST00000236853.2 |
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| 3UTR-3UTR GCA 90 bp | TGTGGGTCTCAGGTCACAGAAGCCCACCTTCATTTAAAACCCACACACTCCCATAATCAGTCCAAGGTTTaGCCTTTCCCACGATGGAGC | + |
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Preference number: 2 (lower is better) Translates to: CGSQVTEAHLHLKPTHSHNQSKV*PFPRWS Trigger: GCTCCATCGTGGGAAAGGGCAAACCTTGGACTGATT...ATGGGAGTGTGTGGGTTTTAAATGAAGGTGGGCTTCTGTGACCTGAGACCCACA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000067801.14 ENSMUST00000078509.12 ENSMUST00000118504.9 ENSMUST00000236853.2 |
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| 3UTR-3UTR GCA 90 bp | GGTCGACACGACCACAGGTATGTGATTCCATTTATAGGAAGAGTCCAGAACAGGGGTGGTGACACTTTGTaGAGGCACTTCACAGCTGTG | + |
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Preference number: 2 (lower is better) Translates to: GRHDHRYVIPFIGRVQNRGGDTL*RHFTAV Trigger: CACAGCTGTGAAGTGCCTGCACAAAGTGTCACCACC...CCTGTTCTGGACTCTTCCTATAAATGGAATCACATACCTGTGGTCGTGTCGACC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000067801.14 ENSMUST00000236853.2 |
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| 3UTR-3UTR CCA 90 bp | GTCTGTGCCCATCCTTCCTGGCTAACATTCCTCAGTTCTGTGACACCAGAGGAAATTCATTTAGGTAGCTaGGTGTTAGGAGGGGAGGGT | + |
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Preference number: 2 (lower is better) Translates to: VCAHPSWLTFLSSVTPEEIHLGS*VLGGEG Trigger: ACCCTCCCCTCCTAACACCCAGCTACCTAAATGAAT...TTCCTCTGGTGTCACAGAACTGAGGAATGTTAGCCAGGAAGGATGGGCACAGAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000067801.14 ENSMUST00000078509.12 ENSMUST00000118504.9 ENSMUST00000236853.2 |
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| 3UTR-3UTR CCA 90 bp | TATGAGTACACTGTAGCTGTACAGATGGTTGTAAGCCTTCATGTGGTTGCTGGGACTGCCAAAGTCTGGTaGTGGCAGGTCCTCTGCTTC | + |
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Preference number: 2 (lower is better) Translates to: YEYTVAVQMVVSLHVVAGTAKVW*WQVLCF Trigger: GAAGCAGAGGACCTGCCACCACCAGACTTTGGCAGT...CCCAGCAACCACATGAAGGCTTACAACCATCTGTACAGCTACAGTGTACTCATA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000236853.2 |
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| 3UTR-3UTR GCA 90 bp | TGTGGGTCTCAGGTCACAGAAGCCCACCTTCATTTAAAACCCACACACTCCCATCACCCTGAGTCTTGTTaGTATTGTAGTCTGTGCCCA | + |
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Preference number: 2 (lower is better) Translates to: CGSQVTEAHLHLKPTHSHHPESC*YCSLCP Trigger: TGGGCACAGACTACAATAGCAACAAGACTCAGGGTG...ATGGGAGTGTGTGGGTTTTAAATGAAGGTGGGCTTCTGTGACCTGAGACCCACA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000067801.14 ENSMUST00000078509.12 ENSMUST00000118504.9 ENSMUST00000236853.2 |
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| 3UTR-3UTR CCA 90 bp | AGGAAGAGTCCAGAACAGGGAGATCCATTGAGACAGAAAGTGGGTGCTTGTCAGTGTGCCCATCCTTCCTaGCTAACATTCCTCAGTTCT | + |
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Preference number: 2 (lower is better) Translates to: RKSPEQGDPLRQKVGACQCAHPS*LTFLSS Trigger: AGAACTGAGGAATGTTAGCCAGGAAGGATGGGCACA...CTGACAAGCACCCACTTTCTGTCTCAATGGATCTCCCTGTTCTGGACTCTTCCT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000067801.14 ENSMUST00000078509.12 ENSMUST00000118504.9 ENSMUST00000236853.2 |
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| 3UTR-3UTR CCA 90 bp | TGTGGGTCTCAGGTCACAGAAGCCCACCTTCATTTAAAACCCACACACTCCCATTGTGCCCATCCTTCCTaGCTAACATTCCTCAGTTCT | + |
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Preference number: 2 (lower is better) Translates to: CGSQVTEAHLHLKPTHSHCAHPS*LTFLSS Trigger: AGAACTGAGGAATGTTAGCCAGGAAGGATGGGCACA...ATGGGAGTGTGTGGGTTTTAAATGAAGGTGGGCTTCTGTGACCTGAGACCCACA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000067801.14 ENSMUST00000078509.12 ENSMUST00000118504.9 ENSMUST00000236853.2 |
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| 3UTR-3UTR CCA 90 bp | AGAACTATGGCTCAATATATTTTTCTAGCAAAGAGTTCCACAACCGGTTCCAGGGAGCCTGGGACTGGTTaGATGCAGCAGCTCACTGCC | + |
|
Preference number: 2 (lower is better) Translates to: RTMAQYIFLAKSSTTGSREPGTG*MQQLTA Trigger: GGCAGTGAGCTGCTGCATCCAACCAGTCCCAGGCTC...CCTGGAACCGGTTGTGGAACTCTTTGCTAGAAAAATATATTGAGCCATAGTTCT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000236853.2 |
||
| 3UTR-3UTR CCA 90 bp | AGAACTATGGCTCAATATATTTTTCTAGCAAAGAGTTCCACAACCGGTTCCAGGTGGCTGGGACCTGCATaGAGCCTGGGACTGGTTGGA | + |
|
Preference number: 2 (lower is better) Translates to: RTMAQYIFLAKSSTTGSRWLGPA*SLGLVG Trigger: TCCAACCAGTCCCAGGCTCCATGCAGGTCCCAGCCA...CCTGGAACCGGTTGTGGAACTCTTTGCTAGAAAAATATATTGAGCCATAGTTCT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000236853.2 |
||
| 3UTR-3UTR TCA 90 bp | GAGGGATGTGTTCAGGCATACATACACACAGAGAATAAGGACCATGCACACAATCATTCCTCAGTTCTGTaGCACCAGAGGAAAGGCCCT | + |
|
Preference number: 2 (lower is better) Translates to: EGCVQAYIHTENKDHAHNHSSVL*HQRKGP Trigger: AGGGCCTTTCCTCTGGTGTCACAGAACTGAGGAATG...ATTGTGTGCATGGTCCTTATTCTCTGTGTGTATGTATGCCTGAACACATCCCTC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000236853.2 |
||
| 3UTR-3UTR GCA 90 bp | TCGACACGACCACAGGTATGTGATTCCATTTATAGGAAGAGTCCAGAACAGGGAAATCAGTCCAAGGTTTaGCCTTTCCCACGATGGAGC | + |
|
Preference number: 2 (lower is better) Translates to: STRPQVCDSIYRKSPEQGNQSKV*PFPRWS Trigger: GCTCCATCGTGGGAAAGGGCAAACCTTGGACTGATT...TCCCTGTTCTGGACTCTTCCTATAAATGGAATCACATACCTGTGGTCGTGTCGA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000067801.14 ENSMUST00000236853.2 |
||
| 3UTR-3UTR GCA 90 bp | TCCATTTATAGGAAGAGTCCAGAACAGGGAGATCCATTGAGACAGAAAGTGGGTGGTGGTGACACTTTGTaGAGGCACTTCACAGCTGTG | + |
|
Preference number: 2 (lower is better) Translates to: SIYRKSPEQGDPLRQKVGGGDTL*RHFTAV Trigger: CACAGCTGTGAAGTGCCTGCACAAAGTGTCACCACC...ACCCACTTTCTGTCTCAATGGATCTCCCTGTTCTGGACTCTTCCTATAAATGGA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000067801.14 ENSMUST00000078509.12 ENSMUST00000118504.9 ENSMUST00000236853.2 |
||
| 3UTR CAA 90 bp | AATCCCATTATAAATGGTTGTGAGCCACCATGTGAGAGTTGGGAATaGAACTCGGGTCCTCTGGAAGAGCAGCTAGTGCTCTTTAACTGC | + |
|
Preference number: 2 (lower is better) Translates to: NPIINGCEPPCESWE*NSGPLEEQLVLFNC Trigger: GCAGTTAAAGAGCACTAGCTGCTCTTCCAGAGGACCCGAGTTCAATTCCCAACTCTCACATGGTGGCTCACAACCATTTATAATGGGATT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000236853.2 |
||
| 3UTR-3UTR GCA 90 bp | TATGAGTACACTGTAGCTGTACAGATGGTTGTAAGCCTTCATGTGGTTGCTGGGAGGTGTGTGTCACTGTaGATAGCCTCTCTCTTCTCT | + |
|
Preference number: 2 (lower is better) Translates to: YEYTVAVQMVVSLHVVAGRCVSL*IASLFS Trigger: AGAGAAGAGAGAGGCTATGCACAGTGACACACACCT...CCCAGCAACCACATGAAGGCTTACAACCATCTGTACAGCTACAGTGTACTCATA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000236853.2 |
||
| 3UTR-3UTR TCA 90 bp | AATCATCAAAATAGAACAATTCTAGAAGGATGTATTCAGTGGGGGTTGTCATCCGTGAGAGTTGGGAATTaGACTCGGGTCCTCTGGAAG | + |
|
Preference number: 2 (lower is better) Translates to: NHQNRTILEGCIQWGLSSVRVGN*TRVLWK Trigger: CTTCCAGAGGACCCGAGTTCAATTCCCAACTCTCAC...GGATGACAACCCCCACTGAATACATCCTTCTAGAATTGTTCTATTTTGATGATT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000236853.2 |
||
| 3UTR-3UTR CCA 90 bp | AATCATCAAAATAGAACAATTCTAGAAGGATGTATTCAGTGGGGGTTGTCATCCGTTAGCTTCAAGACTTaGCAGAGCTGCCTCAGCCTC | + |
|
Preference number: 2 (lower is better) Translates to: NHQNRTILEGCIQWGLSSVSFKT*QSCLSL Trigger: GAGGCTGAGGCAGCTCTGCCAAGTCTTGAAGCTAAC...GGATGACAACCCCCACTGAATACATCCTTCTAGAATTGTTCTATTTTGATGATT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000236853.2 |
||
| 3UTR-3UTR TCA 90 bp | ACAAAAATCATTTGGCAGGGTAAAGCACAAAAATCATCCAAGCATTACAACTCTAGTGCTCTTAACCGCTaGACTAACTCTCCAGCCCCA | + |
|
Preference number: 2 (lower is better) Translates to: TKIIWQGKAQKSSKHYNSSALNR*TNSPAP Trigger: TGGGGCTGGAGAGTTAGTTCAGCGGTTAAGAGCACT...AGAGTTGTAATGCTTGGATGATTTTTGTGCTTTACCCTGCCAAATGATTTTTGT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000236853.2 |
||
| 3UTR-3UTR GCA 90 bp | TTTGTGGCATTATCTATACCAGGGTTGCCATTCTGTGTTCCCTTGTCTAAGCCATCTGAGTGCTCTATTTaGCTGCATGACAGAAAAGAA | + |
|
Preference number: 2 (lower is better) Translates to: FVALSIPGLPFCVPLSKPSECSI*LHDRKE Trigger: TTCTTTTCTGTCATGCAGGCAAATAGAGCACTCAGA...TGGCTTAGACAAGGGAACACAGAATGGCAACCCTGGTATAGATAATGCCACAAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000236853.2 |
||
| 3UTR-3UTR CCA 90 bp | AATCATCAAAATAGAACAATTCTAGAAGGATGTATTCAGTGGGGGTTGTCATCCAGGGATAACCAAGGCTaGGGAAGACTGAGAATGGTG | + |
|
Preference number: 2 (lower is better) Translates to: NHQNRTILEGCIQWGLSSRDNQG*GRLRMV Trigger: CACCATTCTCAGTCTTCCCCAGCCTTGGTTATCCCT...GGATGACAACCCCCACTGAATACATCCTTCTAGAATTGTTCTATTTTGATGATT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000236853.2 |
||
| 3UTR CCA 72 bp | TGGGTGCTTGTCAGGGAAGGAGTGGGACGTGAGGAGTaGGCTAAGCAGGGTCATGGCCCAGGTGGTGACACT | + |
|
Preference number: 3 (lower is better) Translates to: WVLVREGVGREE*AKQGHGPGGDT Trigger: AGTGTCACCACCTGGGCCATGACCCTGCTTAGCCCACTCCTCACGTCCCACTCCTTCCCTGACAAGCACCCA 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000067801.14 ENSMUST00000078509.12 ENSMUST00000118504.9 ENSMUST00000236853.2 |
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| 3UTR CCA 72 bp | GGGACTGGTTGGATGCAGCAGCTCACTGCCAAAGTCTaGTGGTGGCAGGTCCTCTGCTTCTGTGGCACGTCC | + |
|
Preference number: 3 (lower is better) Translates to: GTGWMQQLTAKV*WWQVLCFCGTS Trigger: GGACGTGCCACAGAAGCAGAGGACCTGCCACCACCAGACTTTGGCAGTGAGCTGCTGCATCCAACCAGTCCC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000236853.2 |
||
| 3UTR GCA 72 bp | CATGGAGCCTGGGACTGGTTGGATGCAGCAGCTCACTaGCAAAGTCTGGTGGTGGCAGGTCCTCTGCTTCTG | + |
|
Preference number: 3 (lower is better) Translates to: HGAWDWLDAAAH*QSLVVAGPLLL Trigger: CAGAAGCAGAGGACCTGCCACCACCAGACTTTGGCAGTGAGCTGCTGCATCCAACCAGTCCCAGGCTCCATG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000236853.2 |
||
| 3UTR CCA 72 bp | CATATGGCTGGGACCTGCATGGAGCCTGGGACTGGTTaGATGCAGCAGCTCACTGCCAAAGTCTGGTGGTGG | + |
|
Preference number: 3 (lower is better) Translates to: HMAGTCMEPGTG*MQQLTAKVWWW Trigger: CCACCACCAGACTTTGGCAGTGAGCTGCTGCATCCAACCAGTCCCAGGCTCCATGCAGGTCCCAGCCATATG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000236853.2 |
||
| 3UTR-3UTR CAA 90 bp | AGATCCATTGAGACAGAAAGTGGGTGCTTGTCAGGGAAGGAGTGGGACGTGAGGAGCCACCTGCTGGACTaGGGTGAGGAAGCTGGTAGG | + |
|
Preference number: 3 (lower is better) Translates to: RSIETESGCLSGKEWDVRSHLLD*GEEAGR Trigger: CCTACCAGCTTCCTCACCCAAGTCCAGCAGGTGGCT...CCTCACGTCCCACTCCTTCCCTGACAAGCACCCACTTTCTGTCTCAATGGATCT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000067801.14 ENSMUST00000078509.12 ENSMUST00000118504.9 ENSMUST00000236853.2 |
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| 3UTR GCA 72 bp | TGTAGACCAGGCTGGCCTCGAACTCAGAAATCTGCCTaGCTCTGCCTCCTGAGTGCTGGGATTAAAGGCCTG | + |
|
Preference number: 3 (lower is better) Translates to: CRPGWPRTQKSA*LCLLSAGIKGL Trigger: CAGGCCTTTAATCCCAGCACTCAGGAGGCAGAGGCAGGCAGATTTCTGAGTTCGAGGCCAGCCTGGTCTACA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000236853.2 |
||
| 3UTR CCA 72 bp | ATTGAGACAGAAAGTGGGTGCTTGTCAGGGAAGGAGTaGGACGTGAGGAGTGGGCTAAGCAGGGTCATGGCC | + |
|
Preference number: 3 (lower is better) Translates to: IETESGCLSGKE*DVRSGLSRVMA Trigger: GGCCATGACCCTGCTTAGCCCACTCCTCACGTCCCACTCCTTCCCTGACAAGCACCCACTTTCTGTCTCAAT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000067801.14 ENSMUST00000078509.12 ENSMUST00000118504.9 ENSMUST00000236853.2 |
||
| 3UTR CCA 72 bp | TGCCAAAGTCTGGTGGTGGCAGGTCCTCTGCTTCTGTaGCACGTCCTTCTAATCTCCGACTGGCGTCAACCT | + |
|
Preference number: 3 (lower is better) Translates to: CQSLVVAGPLLL*HVLLISDWRQP Trigger: AGGTTGACGCCAGTCGGAGATTAGAAGGACGTGCCACAGAAGCAGAGGACCTGCCACCACCAGACTTTGGCA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000236853.2 |
||
| 3UTR CCA 72 bp | GACCTAGTCACATATGGCTGGGACCTGCATGGAGCCTaGGACTGGTTGGATGCAGCAGCTCACTGCCAAAGT | + |
|
Preference number: 3 (lower is better) Translates to: DLVTYGWDLHGA*DWLDAAAHCQS Trigger: ACTTTGGCAGTGAGCTGCTGCATCCAACCAGTCCCAGGCTCCATGCAGGTCCCAGCCATATGTGACTAGGTC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000236853.2 |
||
| 3UTR TCA 72 bp | CCACAGGAAAGAGGGATAACCAAGGCTGGGGAAGACTaGGAATGGTGCCCAGAGGCACACAGGCAAGCATGT | + |
|
Preference number: 3 (lower is better) Translates to: PQERGITKAGED*EWCPEAHRQAC Trigger: ACATGCTTGCCTGTGTGCCTCTGGGCACCATTCTCAGTCTTCCCCAGCCTTGGTTATCCCTCTTTCCTGTGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000236853.2 |
||
| 3UTR TCA 72 bp | GAGGTTGAACCTATCCCGGGCTACATAGCAAGACCCTaGACCTGCGCACCAAAGCCAAGTCCCTCCTCTAAG | + |
|
Preference number: 3 (lower is better) Translates to: EVEPIPGYIARP*TCAPKPSPSSK Trigger: CTTAGAGGAGGGACTTGGCTTTGGTGCGCAGGTTCAGGGTCTTGCTATGTAGCCCGGGATAGGTTCAACCTC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000236853.2 |
||
| 3UTR CCA 72 bp | TCACCCCGTAAGCCATTAGACCTAGTCACATATGGCTaGGACCTGCATGGAGCCTGGGACTGGTTGGATGCA | + |
|
Preference number: 3 (lower is better) Translates to: SPRKPLDLVTYG*DLHGAWDWLDA Trigger: TGCATCCAACCAGTCCCAGGCTCCATGCAGGTCCCAGCCATATGTGACTAGGTCTAATGGCTTACGGGGTGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000236853.2 |
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| 3UTR-3UTR CAA 90 bp | TCTCAGGTCACAGAAGCCCACCTTCATTTAAAACCCACACACTCCCATGCTAGGAGCCACCTGCTGGACTaGGGTGAGGAAGCTGGTAGG | + |
|
Preference number: 3 (lower is better) Translates to: SQVTEAHLHLKPTHSHARSHLLD*GEEAGR Trigger: CCTACCAGCTTCCTCACCCAAGTCCAGCAGGTGGCT...CCTAGCATGGGAGTGTGTGGGTTTTAAATGAAGGTGGGCTTCTGTGACCTGAGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000067801.14 ENSMUST00000078509.12 ENSMUST00000118504.9 ENSMUST00000236853.2 |
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| 3UTR TCA 72 bp | AGGCAAGCATGTGAAACTGCAGCCCAGTGCGGCAAATaGACACAGGATTGCAGAGAACCCAACCTGGGCTAC | + |
|
Preference number: 3 (lower is better) Translates to: RQACETAAQCGK*TQDCREPNLGY Trigger: GTAGCCCAGGTTGGGTTCTCTGCAATCCTGTGTTCATTTGCCGCACTGGGCTGCAGTTTCACATGCTTGCCT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000236853.2 |
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| 3UTR CCA 72 bp | GAGGGAGACTTTGGGAGTCCGTTCTCTTCTACCATGTaGGTCCCAGGAATGAAACTCAGGTCGCCAGGCTTA | + |
|
Preference number: 3 (lower is better) Translates to: EGDFGSPFSSTM*VPGMKLRSPGL Trigger: TAAGCCTGGCGACCTGAGTTTCATTCCTGGGACCCACATGGTAGAAGAGAACGGACTCCCAAAGTCTCCCTC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000236853.2 |
||
| 3UTR CCA 72 bp | AAGTCTTGGCGTATAGCTCTAGTTAGCTTCAAGACTTaGCAGAGCTGCCTCAGCCTCCTGAGTCCTGGGATC | + |
|
Preference number: 3 (lower is better) Translates to: KSWRIALVSFKT*QSCLSLLSPGI Trigger: GATCCCAGGACTCAGGAGGCTGAGGCAGCTCTGCCAAGTCTTGAAGCTAACTAGAGCTATACGCCAAGACTT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000236853.2 |
||
| 3UTR GCA 72 bp | GCAGTGGGTACCACTCCTAGCAAACATGGGTGTCCATaGCTTAGATGTGGTGATGGAGATGACACCAGAAGA | + |
|
Preference number: 3 (lower is better) Translates to: AVGTTPSKHGCP*LRCGDGDDTRR Trigger: TCTTCTGGTGTCATCTCCATCACCACATCTAAGGCATGGACACCCATGTTTGCTAGGAGTGGTACCCACTGC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000236853.2 |
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| 3UTR CCA 72 bp | CAGGTGGTGACACTTTGTGCAGGCACTTCACAGCTGTaGGTCTCAGGTCACAGAAGCCCACCTTCATTTAAA | + |
|
Preference number: 3 (lower is better) Translates to: QVVTLCAGTSQL*VSGHRSPPSFK Trigger: TTTAAATGAAGGTGGGCTTCTGTGACCTGAGACCCACAGCTGTGAAGTGCCTGCACAAAGTGTCACCACCTG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000067801.14 ENSMUST00000078509.12 ENSMUST00000118504.9 ENSMUST00000236853.2 |
||
| 3UTR CCA 72 bp | AGGCCTCCCCCTTTTTCAATCAATCGCCTTAGTCTGTaGAGCTTGTCACACAGATCCTACTGGAGGTGGTGT | + |
|
Preference number: 3 (lower is better) Translates to: RPPPFSINRLSL*SLSHRSYWRWC Trigger: ACACCACCTCCAGTAGGATCTGTGTGACAAGCTCCACAGACTAAGGCGATTGATTGAAAAAGGGGGAGGCCT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000236853.2 |
||
| 3UTR-3UTR CAA 90 bp | TATGAGTACACTGTAGCTGTACAGATGGTTGTAAGCCTTCATGTGGTTGCTGGGACAGAAAGTGGGTGCTaGTCAGGGAAGGAGTGGGAC | + |
|
Preference number: 3 (lower is better) Translates to: YEYTVAVQMVVSLHVVAGTESGC*SGKEWD Trigger: GTCCCACTCCTTCCCTGACAAGCACCCACTTTCTGT...CCCAGCAACCACATGAAGGCTTACAACCATCTGTACAGCTACAGTGTACTCATA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000236853.2 |
||
| 3UTR CCA 72 bp | TCTTTTCCTGTCTGGCCTCCTGATGTTCTGGAGGTCTaGAGTGACCTGAGCTCAAGGAATCATCTGGTAAGT | + |
|
Preference number: 3 (lower is better) Translates to: SFPVWPPDVLEV*SDLSSRNHLVS Trigger: ACTTACCAGATGATTCCTTGAGCTCAGGTCACTCCAGACCTCCAGAACATCAGGAGGCCAGACAGGAAAAGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000236853.2 |
||
| 3UTR-3UTR CAA 90 bp | AGAACTATGGCTCAATATATTTTTCTAGCAAAGAGTTCCACAACCGGTTCCAGGAGCCACCTGCTGGACTaGGGTGAGGAAGCTGGTAGG | + |
|
Preference number: 3 (lower is better) Translates to: RTMAQYIFLAKSSTTGSRSHLLD*GEEAGR Trigger: CCTACCAGCTTCCTCACCCAAGTCCAGCAGGTGGCT...CCTGGAACCGGTTGTGGAACTCTTTGCTAGAAAAATATATTGAGCCATAGTTCT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000236853.2 |
||
| 3UTR TCA 72 bp | CCATTTATAGGAAGAGTCCAGAACAGGGAGATCCATTaGGACAGAAAGTGGGTGCTTGTCAGGGAAGGAGTG | + |
|
Preference number: 3 (lower is better) Translates to: PFIGRVQNREIH*DRKWVLVREGV Trigger: CACTCCTTCCCTGACAAGCACCCACTTTCTGTCTCAATGGATCTCCCTGTTCTGGACTCTTCCTATAAATGG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000067801.14 ENSMUST00000078509.12 ENSMUST00000118504.9 ENSMUST00000236853.2 |
||
| 3UTR GCA 72 bp | TTTGGGCACCCTGAGTCTTGTTGCTATTGTAGTCTGTaGCCATCCTTCCTGGCTAACATTCCTCAGTTCTGT | + |
|
Preference number: 3 (lower is better) Translates to: FGHPESCCYCSL*PSFLANIPQFC Trigger: ACAGAACTGAGGAATGTTAGCCAGGAAGGATGGGCACAGACTACAATAGCAACAAGACTCAGGGTGCCCAAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000067801.14 ENSMUST00000078509.12 ENSMUST00000118504.9 ENSMUST00000236853.2 |
||
| 3UTR GCA 72 bp | ATGTGGTTGCTGGGAATTAAATTCAGGACCTCTGTTTaGTCTGGCCCTGTTTGCTCCCGCCCAAAGATCTAT | + |
|
Preference number: 3 (lower is better) Translates to: MWLLGIKFRTSV*SGPVCSRPKIY Trigger: ATAGATCTTTGGGCGGGAGCAAACAGGGCCAGAGCAAACAGAGGTCCTGAATTTAATTCCCAGCAACCACAT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000236853.2 |
||
| 3UTR CCA 72 bp | CCCATTATAAATGGTTGTGAGCCACCATGTGAGAGTTaGGAATTGAACTCGGGTCCTCTGGAAGAGCAGCTA | + |
|
Preference number: 3 (lower is better) Translates to: PIINGCEPPCES*ELNSGPLEEQL Trigger: TAGCTGCTCTTCCAGAGGACCCGAGTTCAATTCCCAACTCTCACATGGTGGCTCACAACCATTTATAATGGG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000236853.2 |
||
| 3UTR TCA 72 bp | AAACGAAGACAAGCCATGGGTGGAGCACATGGGAGATaGTGTATAGTTGCTGGACAACAAACCCAAACCACA | + |
|
Preference number: 3 (lower is better) Translates to: KRRQAMGGAHGR*CIVAGQQTQTT Trigger: TGTGGTTTGGGTTTGTTGTCCAGCAACTATACATCATCTCCCATGTGCTCCACCCATGGCTTGTCTTCGTTT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000236853.2 |
||
| 3UTR CCA 72 bp | AGTCTTGTTGCTATTGTAGTCTGTGCCCATCCTTCCTaGCTAACATTCCTCAGTTCTGTGACACCAGAGGAA | + |
|
Preference number: 3 (lower is better) Translates to: SLVAIVVCAHPS*LTFLSSVTPEE Trigger: TTCCTCTGGTGTCACAGAACTGAGGAATGTTAGCCAGGAAGGATGGGCACAGACTACAATAGCAACAAGACT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000067801.14 ENSMUST00000078509.12 ENSMUST00000118504.9 ENSMUST00000236853.2 |
||
| 3UTR GCA 72 bp | TCCTGTCTACATGCTGGCTTTTATGTATGGCCGGAATaGTACTTCCATCATGAAGTCAGTTGTGCTAAGGTA | + |
|
Preference number: 3 (lower is better) Translates to: SCLHAGFYVWPE*YFHHEVSCAKV Trigger: TACCTTAGCACAACTGACTTCATGATGGAAGTAGCATTCCGGCCATACATAAAAGCCAGCATGTAGACAGGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000236853.2 |
||
| 3UTR CCA 72 bp | TCATTTTGGTCCTGTCTACATGCTGGCTTTTATGTATaGCCGGAATGCTACTTCCATCATGAAGTCAGTTGT | + |
|
Preference number: 3 (lower is better) Translates to: SFWSCLHAGFYV*PECYFHHEVSC Trigger: ACAACTGACTTCATGATGGAAGTAGCATTCCGGCCATACATAAAAGCCAGCATGTAGACAGGACCAAAATGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000236853.2 |
||
| 3UTR TCA 72 bp | GTTAATAAATCTCTAACGGTCAGTGCTCTTAACCGCTaGACTAACTCTCCAGCCCCATGGTCAGTTATTATT | + |
|
Preference number: 3 (lower is better) Translates to: VNKSLTVSALNR*TNSPAPWSVII Trigger: AATAATAACTGACCATGGGGCTGGAGAGTTAGTTCAGCGGTTAAGAGCACTGACCGTTAGAGATTTATTAAC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000236853.2 |
||
| 3UTR CCA 72 bp | CACAACTGGCCCCAGTTTTTAATAACTTTATGTATATaGGTATCTTGCCTGCCTATATGGTCTGATGCCCAT | + |
|
Preference number: 3 (lower is better) Translates to: HNWPQFLITLCI*VSCLPIWSDAH Trigger: ATGGGCATCAGACCATATAGGCAGGCAAGATACCCATATACATAAAGTTATTAAAAACTGGGGCCAGTTGTG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000236853.2 |
||
| 3UTR CCA 72 bp | CATCAAAATAGAACAATTCTAGAAGGATGTATTCAGTaGGGGTTGTCATCCAAGGCTAGTAGCATATTCCAA | + |
|
Preference number: 3 (lower is better) Translates to: HQNRTILEGCIQ*GLSSKASSIFQ Trigger: TTGGAATATGCTACTAGCCTTGGATGACAACCCCCACTGAATACATCCTTCTAGAATTGTTCTATTTTGATG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000236853.2 |
||
| 3UTR GCA 72 bp | TGCTTATGTTTTATGTATCTGAGTGCTCTATTTGCCTaGATGACAGAAAAGAATATCAGAAGAGGGCATCAA | + |
|
Preference number: 3 (lower is better) Translates to: CLCFMYLSALFA*MTEKNIRRGHQ Trigger: TTGATGCCCTCTTCTGATATTCTTTTCTGTCATGCAGGCAAATAGAGCACTCAGATACATAAAACATAAGCA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000236853.2 |
||
| 3UTR CAA 72 bp | CCGGGCGGCGGTAGTGCACACCTTCAATCCCAGCACTaGGGAGGCAGAGACAGGCGGATTTCTGAGTTCGAG | + |
|
Preference number: 4 (lower is better) Translates to: PGGGSAHLQSQH*GGRDRRISEFE Trigger: CTCGAACTCAGAAATCCGCCTGTCTCTGCCTCCCAAGTGCTGGGATTGAAGGTGTGCACTACCGCCGCCCGG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000236853.2 |
||
| CDS-3UTR TCA 90 bp | CCAGGTGGTGACACTTTGTGCAGGCACTTCACAGCTGTGGGTCTCAGGTCACAGCAGAGTCAGGCAGGATaGCCACACAGCGCTGCCCTT | + |
|
Preference number: 4 (lower is better) Translates to: PGGDTLCRHFTAVGLRSQQSQAG*PHSAAL Trigger: AAGGGCAGCGCTGTGTGGTCATCCTGCCTGACTCTG...CTGTGACCTGAGACCCACAGCTGTGAAGTGCCTGCACAAAGTGTCACCACCTGG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000067801.14 ENSMUST00000078509.12 ENSMUST00000118504.9 ENSMUST00000236853.2 |
||
| CDS-3UTR TCA 90 bp | TCAGCAGCCACCTGCTGGACTTGGGTGAGGAAGCTGGTAGGTGTCTCTGAAAGCTGGCCCCAGACTCGTTaGCCACAGGTGCCTGGTCAA | + |
|
Preference number: 4 (lower is better) Translates to: SAATCWTWVRKLVGVSESWPQTR*PQVPGQ Trigger: TTGACCAGGCACCTGTGGTCAACGAGTCTGGGGCCA...GCTTTCAGAGACACCTACCAGCTTCCTCACCCAAGTCCAGCAGGTGGCTGCTGA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000067801.14 ENSMUST00000078509.12 ENSMUST00000118504.9 ENSMUST00000236853.2 |
||
| CDS-3UTR TCA 90 bp | GGTGACACTTTGTGCAGGCACTTCACAGCTGTGGGTCTCAGGTCACAGAAGCCCTGGCCCCAGACTCGTTaGCCACAGGTGCCTGGTCAA | + |
|
Preference number: 4 (lower is better) Translates to: GDTLCRHFTAVGLRSQKPWPQTR*PQVPGQ Trigger: TTGACCAGGCACCTGTGGTCAACGAGTCTGGGGCCA...GGGCTTCTGTGACCTGAGACCCACAGCTGTGAAGTGCCTGCACAAAGTGTCACC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000067801.14 ENSMUST00000078509.12 ENSMUST00000118504.9 ENSMUST00000236853.2 |
||
| CDS-3UTR TCA 90 bp | TCAGCAGCCACCTGCTGGACTTGGGTGAGGAAGCTGGTAGGTGTCTCTGAAAGCTCCAGCCAGCAGGGATaGCAGCATGTTCCCGAGGGT | + |
|
Preference number: 4 (lower is better) Translates to: SAATCWTWVRKLVGVSESSSQQG*QHVPEG Trigger: ACCCTCGGGAACATGCTGTCATCCCTGCTGGCTGGA...GCTTTCAGAGACACCTACCAGCTTCCTCACCCAAGTCCAGCAGGTGGCTGCTGA 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000067801.14 ENSMUST00000078509.12 ENSMUST00000118504.9 ENSMUST00000236853.2 |
||
| CDS-3UTR GCA 90 bp | TCCCATGCTAGGGCTAACCAGGTCCCTGAGGATGTCCACACAATCAGTCCAAGGAGTCCGCCATGGCCCTaGCCAGCTGCCAGGTACATC | + |
|
Preference number: 4 (lower is better) Translates to: SHARANQVPEDVHTISPRSPPWP*PAARYI Trigger: GATGTACCTGGCAGCTGGGCAGGGCCATGGCGGACT...CCTTGGACTGATTGTGTGGACATCCTCAGGGACCTGGTTAGCCCTAGCATGGGA 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000067801.14 ENSMUST00000078509.12 ENSMUST00000118504.9 ENSMUST00000236853.2 |
||
| CDS-3UTR TCA 90 bp | GGGAGATCCATTGAGACAGAAAGTGGGTGCTTGTCAGGGAAGGAGTGGGACGTGTGGCCCCAGACTCGTTaGCCACAGGTGCCTGGTCAA | + |
|
Preference number: 4 (lower is better) Translates to: GRSIETESGCLSGKEWDVWPQTR*PQVPGQ Trigger: TTGACCAGGCACCTGTGGTCAACGAGTCTGGGGCCA...CACGTCCCACTCCTTCCCTGACAAGCACCCACTTTCTGTCTCAATGGATCTCCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000067801.14 ENSMUST00000078509.12 ENSMUST00000118504.9 ENSMUST00000236853.2 |
||
| CDS-3UTR TCA 90 bp | GGCAGGACCACAGGAAAGAGGGATAACCAAGGCTGGGGAAGACTGAGAATGGTGTGGCCCCAGACTCGTTaGCCACAGGTGCCTGGTCAA | + |
|
Preference number: 4 (lower is better) Translates to: GRTTGKRDNQGWGRLRMVWPQTR*PQVPGQ Trigger: TTGACCAGGCACCTGTGGTCAACGAGTCTGGGGCCA...CACCATTCTCAGTCTTCCCCAGCCTTGGTTATCCCTCTTTCCTGTGGTCCTGCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000236853.2 |
||
| CDS-3UTR TCA 90 bp | GCCCATCCTTCCTGGCTAACATTCCTCAGTTCTGTGACACCAGAGGAAAGGCCCTCCAGCCAGCAGGGATaGCAGCATGTTCCCGAGGGT | + |
|
Preference number: 4 (lower is better) Translates to: AHPSWLTFLSSVTPEERPSSQQG*QHVPEG Trigger: ACCCTCGGGAACATGCTGTCATCCCTGCTGGCTGGA...GGGCCTTTCCTCTGGTGTCACAGAACTGAGGAATGTTAGCCAGGAAGGATGGGC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000067801.14 ENSMUST00000078509.12 ENSMUST00000118504.9 ENSMUST00000236853.2 |
||
| CDS-3UTR GCA 90 bp | CCAGGTGGTGACACTTTGTGCAGGCACTTCACAGCTGTGGGTCTCAGGTCACAGGCTGCCAGGTACATCTaGTTGGGGTATCAGGCCGGA | + |
|
Preference number: 4 (lower is better) Translates to: PGGDTLCRHFTAVGLRSQAARYI*LGYQAG Trigger: TCCGGCCTGATACCCCAAGCAGATGTACCTGGCAGC...CTGTGACCTGAGACCCACAGCTGTGAAGTGCCTGCACAAAGTGTCACCACCTGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000067801.14 ENSMUST00000078509.12 ENSMUST00000118504.9 ENSMUST00000236853.2 |
||
| CDS-3UTR GCA 90 bp | TCAGCAGCCACCTGCTGGACTTGGGTGAGGAAGCTGGTAGGTGTCTCTGAAAGCGCTGCCAGGTACATCTaGTTGGGGTATCAGGCCGGA | + |
|
Preference number: 4 (lower is better) Translates to: SAATCWTWVRKLVGVSESAARYI*LGYQAG Trigger: TCCGGCCTGATACCCCAAGCAGATGTACCTGGCAGC...GCTTTCAGAGACACCTACCAGCTTCCTCACCCAAGTCCAGCAGGTGGCTGCTGA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000067801.14 ENSMUST00000078509.12 ENSMUST00000118504.9 ENSMUST00000236853.2 |
||
| CDS-3UTR GCA 90 bp | TCAGCAGCCACCTGCTGGACTTGGGTGAGGAAGCTGGTAGGTGTCTCTGAAAGCGTTCTTCAGTCGCCATaGCACTCCCACGTGGGACTC | + |
|
Preference number: 4 (lower is better) Translates to: SAATCWTWVRKLVGVSESVLQSP*HSHVGL Trigger: GAGTCCCACGTGGGAGTGGCATGGCGACTGAAGAAC...GCTTTCAGAGACACCTACCAGCTTCCTCACCCAAGTCCAGCAGGTGGCTGCTGA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000067801.14 ENSMUST00000078509.12 ENSMUST00000118504.9 ENSMUST00000236853.2 |
||
| CDS-3UTR GCA 90 bp | CCAGGTGGTGACACTTTGTGCAGGCACTTCACAGCTGTGGGTCTCAGGTCACAGGTTCTTCAGTCGCCATaGCACTCCCACGTGGGACTC | + |
|
Preference number: 4 (lower is better) Translates to: PGGDTLCRHFTAVGLRSQVLQSP*HSHVGL Trigger: GAGTCCCACGTGGGAGTGGCATGGCGACTGAAGAAC...CTGTGACCTGAGACCCACAGCTGTGAAGTGCCTGCACAAAGTGTCACCACCTGG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000067801.14 ENSMUST00000078509.12 ENSMUST00000118504.9 ENSMUST00000236853.2 |
||
| CDS-3UTR CCA 90 bp | GGTCGACACGACCACAGGTATGTGATTCCATTTATAGGAAGAGTCCAGAACAGGGTGGGGAGTCCGCCATaGCCCTGCCCAGCTGCCAGG | + |
|
Preference number: 4 (lower is better) Translates to: GRHDHRYVIPFIGRVQNRVGSPP*PCPAAR Trigger: CCTGGCAGCTGGGCAGGGCCATGGCGGACTCCCCAC...CCTGTTCTGGACTCTTCCTATAAATGGAATCACATACCTGTGGTCGTGTCGACC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000067801.14 ENSMUST00000236853.2 |
||
| 3UTR CAA 72 bp | TGGGCTAAGCAGGGTCATGGCCCAGGTGGTGACACTTaGTGCAGGCACTTCACAGCTGTGGGTCTCAGGTCA | + |
|
Preference number: 4 (lower is better) Translates to: WAKQGHGPGGDT*CRHFTAVGLRS Trigger: TGACCTGAGACCCACAGCTGTGAAGTGCCTGCACAAAGTGTCACCACCTGGGCCATGACCCTGCTTAGCCCA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000067801.14 ENSMUST00000078509.12 ENSMUST00000118504.9 ENSMUST00000236853.2 |
||
| CDS-3UTR TCA 90 bp | AGATCCATTGAGACAGAAAGTGGGTGCTTGTCAGGGAAGGAGTGGGACGTGAGGCAGAGTCAGGCAGGATaGCCACACAGCGCTGCCCTT | + |
|
Preference number: 4 (lower is better) Translates to: RSIETESGCLSGKEWDVRQSQAG*PHSAAL Trigger: AAGGGCAGCGCTGTGTGGTCATCCTGCCTGACTCTG...CCTCACGTCCCACTCCTTCCCTGACAAGCACCCACTTTCTGTCTCAATGGATCT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000067801.14 ENSMUST00000078509.12 ENSMUST00000118504.9 ENSMUST00000236853.2 |
||
| CDS-3UTR TCA 90 bp | GGTGACACTTTGTGCAGGCACTTCACAGCTGTGGGTCTCAGGTCACAGAAGCCCTTTGCAGACTTCGTCTaGTGGCCGCACCTTTCCAGC | + |
|
Preference number: 4 (lower is better) Translates to: GDTLCRHFTAVGLRSQKPFADFV*WPHLSS Trigger: GCTGGAAAGGTGCGGCCATCAGACGAAGTCTGCAAA...GGGCTTCTGTGACCTGAGACCCACAGCTGTGAAGTGCCTGCACAAAGTGTCACC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000067801.14 ENSMUST00000078509.12 ENSMUST00000118504.9 ENSMUST00000236853.2 |
||
| CDS-3UTR GCA 90 bp | GCCCATCCTTCCTGGCTAACATTCCTCAGTTCTGTGACACCAGAGGAAAGGCCCGAGTGCATGTCCAAGTaGTGGAAGCCCCCAGCAGAG | + |
|
Preference number: 4 (lower is better) Translates to: AHPSWLTFLSSVTPEERPECMSK*WKPPAE Trigger: CTCTGCTGGGGGCTTCCAGCACTTGGACATGCACTC...GGGCCTTTCCTCTGGTGTCACAGAACTGAGGAATGTTAGCCAGGAAGGATGGGC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000067801.14 ENSMUST00000078509.12 ENSMUST00000118504.9 ENSMUST00000236853.2 |
||
| CDS-3UTR GCA 90 bp | GGGAGATCCATTGAGACAGAAAGTGGGTGCTTGTCAGGGAAGGAGTGGGACGTGGAGTGCATGTCCAAGTaGTGGAAGCCCCCAGCAGAG | + |
|
Preference number: 4 (lower is better) Translates to: GRSIETESGCLSGKEWDVECMSK*WKPPAE Trigger: CTCTGCTGGGGGCTTCCAGCACTTGGACATGCACTC...CACGTCCCACTCCTTCCCTGACAAGCACCCACTTTCTGTCTCAATGGATCTCCC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000067801.14 ENSMUST00000078509.12 ENSMUST00000118504.9 ENSMUST00000236853.2 |
||
| CDS-3UTR GCA 90 bp | GGGAGATCCATTGAGACAGAAAGTGGGTGCTTGTCAGGGAAGGAGTGGGACGTGGCTGCCAGGTACATCTaGTTGGGGTATCAGGCCGGA | + |
|
Preference number: 4 (lower is better) Translates to: GRSIETESGCLSGKEWDVAARYI*LGYQAG Trigger: TCCGGCCTGATACCCCAAGCAGATGTACCTGGCAGC...CACGTCCCACTCCTTCCCTGACAAGCACCCACTTTCTGTCTCAATGGATCTCCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000067801.14 ENSMUST00000078509.12 ENSMUST00000118504.9 ENSMUST00000236853.2 |
||
| CDS-3UTR GCA 90 bp | CCAGAACAGGGAGATCCATTGAGACAGAAAGTGGGTGCTTGTCAGGGAAGGAGTAGTCCGCCATGGCCCTaGCCAGCTGCCAGGTACATC | + |
|
Preference number: 4 (lower is better) Translates to: PEQGDPLRQKVGACQGRSSPPWP*PAARYI Trigger: GATGTACCTGGCAGCTGGGCAGGGCCATGGCGGACT...ACTCCTTCCCTGACAAGCACCCACTTTCTGTCTCAATGGATCTCCCTGTTCTGG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000067801.14 ENSMUST00000078509.12 ENSMUST00000118504.9 ENSMUST00000236853.2 |
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| CDS-3UTR GCA 90 bp | GGCAGGACCACAGGAAAGAGGGATAACCAAGGCTGGGGAAGACTGAGAATGGTGGTTCTTCAGTCGCCATaGCACTCCCACGTGGGACTC | + |
|
Preference number: 4 (lower is better) Translates to: GRTTGKRDNQGWGRLRMVVLQSP*HSHVGL Trigger: GAGTCCCACGTGGGAGTGGCATGGCGACTGAAGAAC...CACCATTCTCAGTCTTCCCCAGCCTTGGTTATCCCTCTTTCCTGTGGTCCTGCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000236853.2 |
||
| CDS-3UTR GCA 90 bp | GGGAGATCCATTGAGACAGAAAGTGGGTGCTTGTCAGGGAAGGAGTGGGACGTGGGATGTGAGAGAGTGTaGCCAGCGTGTCGGTCAGGT | + |
|
Preference number: 4 (lower is better) Translates to: GRSIETESGCLSGKEWDVGCERV*PACRSG Trigger: ACCTGACCGACACGCTGGGCACACTCTCTCACATCC...CACGTCCCACTCCTTCCCTGACAAGCACCCACTTTCTGTCTCAATGGATCTCCC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000067801.14 ENSMUST00000078509.12 ENSMUST00000118504.9 ENSMUST00000236853.2 |
||
| CDS-3UTR GCA 90 bp | GGGAGATCCATTGAGACAGAAAGTGGGTGCTTGTCAGGGAAGGAGTGGGACGTGCTGCAGTATTGGATCTaGTCGTGGACCACCAGGGCG | + |
|
Preference number: 4 (lower is better) Translates to: GRSIETESGCLSGKEWDVLQYWI*SWTTRA Trigger: CGCCCTGGTGGTCCACGAGCAGATCCAATACTGCAG...CACGTCCCACTCCTTCCCTGACAAGCACCCACTTTCTGTCTCAATGGATCTCCC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000078509.12 ENSMUST00000118504.9 |
||
| CDS-3UTR CCA 90 bp | GCCACCTGCTGGACTTGGGTGAGGAAGCTGGTAGGTGTCTCTGAAAGCCAAGAATGCATGTCCAAGTGCTaGAAGCCCCCAGCAGAGCCA | + |
|
Preference number: 4 (lower is better) Translates to: ATCWTWVRKLVGVSESQECMSKC*KPPAEP Trigger: TGGCTCTGCTGGGGGCTTCCAGCACTTGGACATGCA...TTCTTGGCTTTCAGAGACACCTACCAGCTTCCTCACCCAAGTCCAGCAGGTGGC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000067801.14 ENSMUST00000078509.12 ENSMUST00000118504.9 ENSMUST00000236853.2 |
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| CDS-3UTR TCA 90 bp | GGGAGATCCATTGAGACAGAAAGTGGGTGCTTGTCAGGGAAGGAGTGGGACGTGTTTGCAGACTTCGTCTaGTGGCCGCACCTTTCCAGC | + |
|
Preference number: 4 (lower is better) Translates to: GRSIETESGCLSGKEWDVFADFV*WPHLSS Trigger: GCTGGAAAGGTGCGGCCATCAGACGAAGTCTGCAAA...CACGTCCCACTCCTTCCCTGACAAGCACCCACTTTCTGTCTCAATGGATCTCCC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000067801.14 ENSMUST00000078509.12 ENSMUST00000118504.9 ENSMUST00000236853.2 |
||
| CDS-3UTR TCA 90 bp | CTAAGTGAGGATAAGCTTGGCAGAGGTGGCCACAGGGAGGTTGAACCTATCCCGTTTGCAGACTTCGTCTaGTGGCCGCACCTTTCCAGC | + |
|
Preference number: 4 (lower is better) Translates to: LSEDKLGRGGHREVEPIPFADFV*WPHLSS Trigger: GCTGGAAAGGTGCGGCCATCAGACGAAGTCTGCAAA...CGGGATAGGTTCAACCTCCCTGTGGCCACCTCTGCCAAGCTTATCCTCACTTAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000236853.2 |
||
| CDS-3UTR TCA 90 bp | TCAGCAGCCACCTGCTGGACTTGGGTGAGGAAGCTGGTAGGTGTCTCTGAAAGCGCAGGTCAATGGCAGTaGCAACCCCAAACACCATCT | + |
|
Preference number: 4 (lower is better) Translates to: SAATCWTWVRKLVGVSESAGQWQ*QPQTPS Trigger: AGATGGTGTTTGGGGTTGTCACTGCCATTGACCTGC...GCTTTCAGAGACACCTACCAGCTTCCTCACCCAAGTCCAGCAGGTGGCTGCTGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000067801.14 ENSMUST00000078509.12 ENSMUST00000118504.9 ENSMUST00000236853.2 |
||
| CDS-3UTR GCA 90 bp | TCTCAGGTCACAGAAGCCCACCTTCATTTAAAACCCACACACTCCCATGCTAGGAGTCCGCCATGGCCCTaGCCAGCTGCCAGGTACATC | + |
|
Preference number: 4 (lower is better) Translates to: SQVTEAHLHLKPTHSHARSPPWP*PAARYI Trigger: GATGTACCTGGCAGCTGGGCAGGGCCATGGCGGACT...CCTAGCATGGGAGTGTGTGGGTTTTAAATGAAGGTGGGCTTCTGTGACCTGAGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000067801.14 ENSMUST00000078509.12 ENSMUST00000118504.9 ENSMUST00000236853.2 |
||
| CDS-3UTR GCA 90 bp | GGTGACACTTTGTGCAGGCACTTCACAGCTGTGGGTCTCAGGTCACAGAAGCCCACCCCAAACACCATCTaGTGCTTGCTGGACATGCCA | + |
|
Preference number: 4 (lower is better) Translates to: GDTLCRHFTAVGLRSQKPTPNTI*CLLDMP Trigger: TGGCATGTCCAGCAAGCAGCAGATGGTGTTTGGGGT...GGGCTTCTGTGACCTGAGACCCACAGCTGTGAAGTGCCTGCACAAAGTGTCACC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000067801.14 ENSMUST00000078509.12 ENSMUST00000118504.9 ENSMUST00000236853.2 |
||
| CDS-3UTR CCA 90 bp | AGATCCATTGAGACAGAAAGTGGGTGCTTGTCAGGGAAGGAGTGGGACGTGAGGTGCATGTCCAAGTGCTaGAAGCCCCCAGCAGAGCCA | + |
|
Preference number: 4 (lower is better) Translates to: RSIETESGCLSGKEWDVRCMSKC*KPPAEP Trigger: TGGCTCTGCTGGGGGCTTCCAGCACTTGGACATGCA...CCTCACGTCCCACTCCTTCCCTGACAAGCACCCACTTTCTGTCTCAATGGATCT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000067801.14 ENSMUST00000078509.12 ENSMUST00000118504.9 ENSMUST00000236853.2 |
||
| CDS-3UTR TCA 90 bp | GGTGACACTTTGTGCAGGCACTTCACAGCTGTGGGTCTCAGGTCACAGAAGCCCCCAAGAGCTCACACTTaGGACCGGCATTCTTTGAGA | + |
|
Preference number: 4 (lower is better) Translates to: GDTLCRHFTAVGLRSQKPPRAHT*DRHSLR Trigger: TCTCAAAGAATGCCGGTCTCAAGTGTGAGCTCTTGG...GGGCTTCTGTGACCTGAGACCCACAGCTGTGAAGTGCCTGCACAAAGTGTCACC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000067801.14 ENSMUST00000078509.12 ENSMUST00000118504.9 ENSMUST00000236853.2 |
||
| CDS-3UTR TCA 90 bp | TCCCATGCTAGGGCTAACCAGGTCCCTGAGGATGTCCACACAATCAGTCCAAGGGCAGGTCAATGGCAGTaGCAACCCCAAACACCATCT | + |
|
Preference number: 4 (lower is better) Translates to: SHARANQVPEDVHTISPRAGQWQ*QPQTPS Trigger: AGATGGTGTTTGGGGTTGTCACTGCCATTGACCTGC...CCTTGGACTGATTGTGTGGACATCCTCAGGGACCTGGTTAGCCCTAGCATGGGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000067801.14 ENSMUST00000078509.12 ENSMUST00000118504.9 ENSMUST00000236853.2 |
||
| CDS-3UTR GCA 90 bp | GTCTGTGCCCATCCTTCCTGGCTAACATTCCTCAGTTCTGTGACACCAGAGGAAGAGTGCATGTCCAAGTaGTGGAAGCCCCCAGCAGAG | + |
|
Preference number: 4 (lower is better) Translates to: VCAHPSWLTFLSSVTPEEECMSK*WKPPAE Trigger: CTCTGCTGGGGGCTTCCAGCACTTGGACATGCACTC...TTCCTCTGGTGTCACAGAACTGAGGAATGTTAGCCAGGAAGGATGGGCACAGAC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000067801.14 ENSMUST00000078509.12 ENSMUST00000118504.9 ENSMUST00000236853.2 |
||
| CDS-3UTR GCA 90 bp | GGTCGACACGACCACAGGTATGTGATTCCATTTATAGGAAGAGTCCAGAACAGGAGTCCGCCATGGCCCTaGCCAGCTGCCAGGTACATC | + |
|
Preference number: 4 (lower is better) Translates to: GRHDHRYVIPFIGRVQNRSPPWP*PAARYI Trigger: GATGTACCTGGCAGCTGGGCAGGGCCATGGCGGACT...CCTGTTCTGGACTCTTCCTATAAATGGAATCACATACCTGTGGTCGTGTCGACC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000067801.14 ENSMUST00000236853.2 |
||
| CDS-3UTR GCA 90 bp | GTCTGTGCCCATCCTTCCTGGCTAACATTCCTCAGTTCTGTGACACCAGAGGAAGTTCTTCAGTCGCCATaGCACTCCCACGTGGGACTC | + |
|
Preference number: 4 (lower is better) Translates to: VCAHPSWLTFLSSVTPEEVLQSP*HSHVGL Trigger: GAGTCCCACGTGGGAGTGGCATGGCGACTGAAGAAC...TTCCTCTGGTGTCACAGAACTGAGGAATGTTAGCCAGGAAGGATGGGCACAGAC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000067801.14 ENSMUST00000078509.12 ENSMUST00000118504.9 ENSMUST00000236853.2 |
||
| CDS-3UTR GCA 90 bp | CATTTAAAACCCACACACTCCCATGCTAGGGCTAACCAGGTCCCTGAGGATGTCGGATGTGAGAGAGTGTaGCCAGCGTGTCGGTCAGGT | + |
|
Preference number: 4 (lower is better) Translates to: HLKPTHSHARANQVPEDVGCERV*PACRSG Trigger: ACCTGACCGACACGCTGGGCACACTCTCTCACATCC...GACATCCTCAGGGACCTGGTTAGCCCTAGCATGGGAGTGTGTGGGTTTTAAATG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000067801.14 ENSMUST00000078509.12 ENSMUST00000118504.9 ENSMUST00000236853.2 |
||
| CDS-3UTR GCA 90 bp | TCCCATGCTAGGGCTAACCAGGTCCCTGAGGATGTCCACACAATCAGTCCAAGGACACCATCTGCTGCTTaGTGGACATGCCATTGCTGC | + |
|
Preference number: 4 (lower is better) Translates to: SHARANQVPEDVHTISPRTPSAA*WTCHCC Trigger: GCAGCAATGGCATGTCCAGCAAGCAGCAGATGGTGT...CCTTGGACTGATTGTGTGGACATCCTCAGGGACCTGGTTAGCCCTAGCATGGGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000067801.14 ENSMUST00000078509.12 ENSMUST00000118504.9 ENSMUST00000236853.2 |
||
| CDS-3UTR GCA 90 bp | GCCCATCCTTCCTGGCTAACATTCCTCAGTTCTGTGACACCAGAGGAAAGGCCCACCCCAAACACCATCTaGTGCTTGCTGGACATGCCA | + |
|
Preference number: 4 (lower is better) Translates to: AHPSWLTFLSSVTPEERPTPNTI*CLLDMP Trigger: TGGCATGTCCAGCAAGCAGCAGATGGTGTTTGGGGT...GGGCCTTTCCTCTGGTGTCACAGAACTGAGGAATGTTAGCCAGGAAGGATGGGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000067801.14 ENSMUST00000078509.12 ENSMUST00000118504.9 ENSMUST00000236853.2 |
||
| CDS-3UTR GCA 90 bp | CATTTAAAACCCACACACTCCCATGCTAGGGCTAACCAGGTCCCTGAGGATGTCCTGCAGTATTGGATCTaGTCGTGGACCACCAGGGCG | + |
|
Preference number: 4 (lower is better) Translates to: HLKPTHSHARANQVPEDVLQYWI*SWTTRA Trigger: CGCCCTGGTGGTCCACGAGCAGATCCAATACTGCAG...GACATCCTCAGGGACCTGGTTAGCCCTAGCATGGGAGTGTGTGGGTTTTAAATG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000078509.12 ENSMUST00000118504.9 |
||
| CDS-3UTR TCA 90 bp | GGTCGACACGACCACAGGTATGTGATTCCATTTATAGGAAGAGTCCAGAACAGGTCCAGCCAGCAGGGATaGCAGCATGTTCCCGAGGGT | + |
|
Preference number: 4 (lower is better) Translates to: GRHDHRYVIPFIGRVQNRSSQQG*QHVPEG Trigger: ACCCTCGGGAACATGCTGTCATCCCTGCTGGCTGGA...CCTGTTCTGGACTCTTCCTATAAATGGAATCACATACCTGTGGTCGTGTCGACC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000067801.14 ENSMUST00000236853.2 |
||
| CDS-3UTR GCA 90 bp | TCTCAGGTCACAGAAGCCCACCTTCATTTAAAACCCACACACTCCCATGCTAGGGAGTGCATGTCCAAGTaGTGGAAGCCCCCAGCAGAG | + |
|
Preference number: 4 (lower is better) Translates to: SQVTEAHLHLKPTHSHARECMSK*WKPPAE Trigger: CTCTGCTGGGGGCTTCCAGCACTTGGACATGCACTC...CCTAGCATGGGAGTGTGTGGGTTTTAAATGAAGGTGGGCTTCTGTGACCTGAGA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000067801.14 ENSMUST00000078509.12 ENSMUST00000118504.9 ENSMUST00000236853.2 |
||
| CDS-3UTR GCA 90 bp | TCTCAGGTCACAGAAGCCCACCTTCATTTAAAACCCACACACTCCCATGCTAGGTCTCGTGATTGGATCTaGTCGTGGACCACCAGGGCG | + |
|
Preference number: 4 (lower is better) Translates to: SQVTEAHLHLKPTHSHARSRDWI*SWTTRA Trigger: CGCCCTGGTGGTCCACGAGCAGATCCAATCACGAGA...CCTAGCATGGGAGTGTGTGGGTTTTAAATGAAGGTGGGCTTCTGTGACCTGAGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000067801.14 ENSMUST00000236853.2 |
||
| CDS-3UTR GCA 90 bp | CCAGAACAGGGAGATCCATTGAGACAGAAAGTGGGTGCTTGTCAGGGAAGGAGTGCTGCTTGCTGGACATaGCATTGCTGCAGTCTGTGG | + |
|
Preference number: 4 (lower is better) Translates to: PEQGDPLRQKVGACQGRSAACWT*HCCSLW Trigger: CCACAGACTGCAGCAATGGCATGTCCAGCAAGCAGC...ACTCCTTCCCTGACAAGCACCCACTTTCTGTCTCAATGGATCTCCCTGTTCTGG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000067801.14 ENSMUST00000236853.2 |
||
| CDS-3UTR GCA 90 bp | CCAGGTGGTGACACTTTGTGCAGGCACTTCACAGCTGTGGGTCTCAGGTCACAGTGCTGGACATGCCATTaGTGCAGTATTGGATCTGCT | + |
|
Preference number: 4 (lower is better) Translates to: PGGDTLCRHFTAVGLRSQCWTCH*CSIGSA Trigger: AGCAGATCCAATACTGCAGCAATGGCATGTCCAGCA...CTGTGACCTGAGACCCACAGCTGTGAAGTGCCTGCACAAAGTGTCACCACCTGG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000078509.12 ENSMUST00000118504.9 |
||
| CDS-3UTR TCA 90 bp | GCCACCTGCTGGACTTGGGTGAGGAAGCTGGTAGGTGTCTCTGAAAGCCAAGAACAGTTGTCTCTTTTCTaGGTGCATGTCCAAGTGCTG | + |
|
Preference number: 4 (lower is better) Translates to: ATCWTWVRKLVGVSESQEQLSLF*VHVQVL Trigger: CAGCACTTGGACATGCACTCAGAAAAGAGACAACTG...TTCTTGGCTTTCAGAGACACCTACCAGCTTCCTCACCCAAGTCCAGCAGGTGGC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000067801.14 ENSMUST00000078509.12 ENSMUST00000118504.9 ENSMUST00000236853.2 |
||
| CDS-3UTR TCA 90 bp | CACGACCACAGGTATGTGATTCCATTTATAGGAAGAGTCCAGAACAGGGAGATCCAGAGTCAGGCAGGATaGCCACACAGCGCTGCCCTT | + |
|
Preference number: 4 (lower is better) Translates to: HDHRYVIPFIGRVQNREIQSQAG*PHSAAL Trigger: AAGGGCAGCGCTGTGTGGTCATCCTGCCTGACTCTG...GATCTCCCTGTTCTGGACTCTTCCTATAAATGGAATCACATACCTGTGGTCGTG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000067801.14 ENSMUST00000236853.2 |
||
| CDS-3UTR TCA 90 bp | CATTTAAAACCCACACACTCCCATGCTAGGGCTAACCAGGTCCCTGAGGATGTCGCAGGTCAATGGCAGTaGCAACCCCAAACACCATCT | + |
|
Preference number: 4 (lower is better) Translates to: HLKPTHSHARANQVPEDVAGQWQ*QPQTPS Trigger: AGATGGTGTTTGGGGTTGTCACTGCCATTGACCTGC...GACATCCTCAGGGACCTGGTTAGCCCTAGCATGGGAGTGTGTGGGTTTTAAATG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000067801.14 ENSMUST00000078509.12 ENSMUST00000118504.9 ENSMUST00000236853.2 |
||
| CDS-3UTR GCA 90 bp | GGTCGACACGACCACAGGTATGTGATTCCATTTATAGGAAGAGTCCAGAACAGGGGATGTGAGAGAGTGTaGCCAGCGTGTCGGTCAGGT | + |
|
Preference number: 4 (lower is better) Translates to: GRHDHRYVIPFIGRVQNRGCERV*PACRSG Trigger: ACCTGACCGACACGCTGGGCACACTCTCTCACATCC...CCTGTTCTGGACTCTTCCTATAAATGGAATCACATACCTGTGGTCGTGTCGACC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000067801.14 ENSMUST00000236853.2 |
||
| CDS-3UTR GCA 90 bp | CCAGAACAGGGAGATCCATTGAGACAGAAAGTGGGTGCTTGTCAGGGAAGGAGTACCCCAAACACCATCTaGTGCTTGCTGGACATGCCA | + |
|
Preference number: 4 (lower is better) Translates to: PEQGDPLRQKVGACQGRSTPNTI*CLLDMP Trigger: TGGCATGTCCAGCAAGCAGCAGATGGTGTTTGGGGT...ACTCCTTCCCTGACAAGCACCCACTTTCTGTCTCAATGGATCTCCCTGTTCTGG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000067801.14 ENSMUST00000078509.12 ENSMUST00000118504.9 ENSMUST00000236853.2 |
||
| CDS-3UTR GCA 90 bp | TCCCATGCTAGGGCTAACCAGGTCCCTGAGGATGTCCACACAATCAGTCCAAGGTGGACATGCCATTGCTaGAGTATTGGATCTGCTCGT | + |
|
Preference number: 4 (lower is better) Translates to: SHARANQVPEDVHTISPRWTCHC*SIGSAR Trigger: ACGAGCAGATCCAATACTGCAGCAATGGCATGTCCA...CCTTGGACTGATTGTGTGGACATCCTCAGGGACCTGGTTAGCCCTAGCATGGGA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000078509.12 ENSMUST00000118504.9 |
||
| CDS-3UTR TCA 90 bp | TGCCCATCCTTCCTGGCTAACATTCCTCAGTTCTGTGACACCAGAGGAAAGGCCCAGTTGTCTCTTTTCTaGGTGCATGTCCAAGTGCTG | + |
|
Preference number: 4 (lower is better) Translates to: CPSFLANIPQFCDTRGKAQLSLF*VHVQVL Trigger: CAGCACTTGGACATGCACTCAGAAAAGAGACAACTG...GGCCTTTCCTCTGGTGTCACAGAACTGAGGAATGTTAGCCAGGAAGGATGGGCA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000067801.14 ENSMUST00000078509.12 ENSMUST00000118504.9 ENSMUST00000236853.2 |
||
| CDS-3UTR TCA 90 bp | TCCATTTATAGGAAGAGTCCAGAACAGGGAGATCCATTGAGACAGAAAGTGGGTCAGAGTCAGGCAGGATaGCCACACAGCGCTGCCCTT | + |
|
Preference number: 4 (lower is better) Translates to: SIYRKSPEQGDPLRQKVGQSQAG*PHSAAL Trigger: AAGGGCAGCGCTGTGTGGTCATCCTGCCTGACTCTG...ACCCACTTTCTGTCTCAATGGATCTCCCTGTTCTGGACTCTTCCTATAAATGGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000067801.14 ENSMUST00000078509.12 ENSMUST00000118504.9 ENSMUST00000236853.2 |
||
| CDS-3UTR GCA 90 bp | GCCACCTGCTGGACTTGGGTGAGGAAGCTGGTAGGTGTCTCTGAAAGCCAAGAATGTCTCTTTTCTGAGTaGATGTCCAAGTGCTGGAAG | + |
|
Preference number: 4 (lower is better) Translates to: ATCWTWVRKLVGVSESQECLFSE*MSKCWK Trigger: CTTCCAGCACTTGGACATGCACTCAGAAAAGAGACA...TTCTTGGCTTTCAGAGACACCTACCAGCTTCCTCACCCAAGTCCAGCAGGTGGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000067801.14 ENSMUST00000078509.12 ENSMUST00000118504.9 ENSMUST00000236853.2 |
||
| CDS-3UTR GCA 90 bp | TGTGGGTCTCAGGTCACAGAAGCCCACCTTCATTTAAAACCCACACACTCCCATACACCATCTGCTGCTTaGTGGACATGCCATTGCTGC | + |
|
Preference number: 4 (lower is better) Translates to: CGSQVTEAHLHLKPTHSHTPSAA*WTCHCC Trigger: GCAGCAATGGCATGTCCAGCAAGCAGCAGATGGTGT...ATGGGAGTGTGTGGGTTTTAAATGAAGGTGGGCTTCTGTGACCTGAGACCCACA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000067801.14 ENSMUST00000078509.12 ENSMUST00000118504.9 ENSMUST00000236853.2 |
||
| CDS-3UTR GCA 90 bp | ACAGGTTTGACCTCAGCAAAACTAAGTGAGGATAAGCTTGGCAGAGGTGGCCACACACCATCTGCTGCTTaGTGGACATGCCATTGCTGC | + |
|
Preference number: 4 (lower is better) Translates to: TGLTSAKLSEDKLGRGGHTPSAA*WTCHCC Trigger: GCAGCAATGGCATGTCCAGCAAGCAGCAGATGGTGT...GTGGCCACCTCTGCCAAGCTTATCCTCACTTAGTTTTGCTGAGGTCAAACCTGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000236853.2 |
||
| CDS-3UTR GCA 90 bp | TGTGGGTCTCAGGTCACAGAAGCCCACCTTCATTTAAAACCCACACACTCCCATACCCCAAACACCATCTaGTGCTTGCTGGACATGCCA | + |
|
Preference number: 4 (lower is better) Translates to: CGSQVTEAHLHLKPTHSHTPNTI*CLLDMP Trigger: TGGCATGTCCAGCAAGCAGCAGATGGTGTTTGGGGT...ATGGGAGTGTGTGGGTTTTAAATGAAGGTGGGCTTCTGTGACCTGAGACCCACA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000067801.14 ENSMUST00000078509.12 ENSMUST00000118504.9 ENSMUST00000236853.2 |
||
| CDS-3UTR GCA 90 bp | TCCATTTATAGGAAGAGTCCAGAACAGGGAGATCCATTGAGACAGAAAGTGGGTGGATGTGAGAGAGTGTaGCCAGCGTGTCGGTCAGGT | + |
|
Preference number: 4 (lower is better) Translates to: SIYRKSPEQGDPLRQKVGGCERV*PACRSG Trigger: ACCTGACCGACACGCTGGGCACACTCTCTCACATCC...ACCCACTTTCTGTCTCAATGGATCTCCCTGTTCTGGACTCTTCCTATAAATGGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000067801.14 ENSMUST00000078509.12 ENSMUST00000118504.9 ENSMUST00000236853.2 |
||
| CDS-3UTR GCA 90 bp | TCCATTTATAGGAAGAGTCCAGAACAGGGAGATCCATTGAGACAGAAAGTGGGTTCTCGTGATTGGATCTaGTCGTGGACCACCAGGGCG | + |
|
Preference number: 4 (lower is better) Translates to: SIYRKSPEQGDPLRQKVGSRDWI*SWTTRA Trigger: CGCCCTGGTGGTCCACGAGCAGATCCAATCACGAGA...ACCCACTTTCTGTCTCAATGGATCTCCCTGTTCTGGACTCTTCCTATAAATGGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000067801.14 ENSMUST00000236853.2 |
||
| CDS-3UTR GCA 90 bp | CACGACCACAGGTATGTGATTCCATTTATAGGAAGAGTCCAGAACAGGGAGATCGCTGCTTGCTGGACATaGCATTGCTGCAGTCTGTGG | + |
|
Preference number: 4 (lower is better) Translates to: HDHRYVIPFIGRVQNREIAACWT*HCCSLW Trigger: CCACAGACTGCAGCAATGGCATGTCCAGCAAGCAGC...GATCTCCCTGTTCTGGACTCTTCCTATAAATGGAATCACATACCTGTGGTCGTG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000067801.14 ENSMUST00000236853.2 |
||
| CDS-3UTR GCA 90 bp | CATTTAAAACCCACACACTCCCATGCTAGGGCTAACCAGGTCCCTGAGGATGTCTGCTGGACATGCCATTaGTGCAGTATTGGATCTGCT | + |
|
Preference number: 4 (lower is better) Translates to: HLKPTHSHARANQVPEDVCWTCH*CSIGSA Trigger: AGCAGATCCAATACTGCAGCAATGGCATGTCCAGCA...GACATCCTCAGGGACCTGGTTAGCCCTAGCATGGGAGTGTGTGGGTTTTAAATG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000078509.12 ENSMUST00000118504.9 |
||
| CDS-3UTR CCA 90 bp | TCCATTTATAGGAAGAGTCCAGAACAGGGAGATCCATTGAGACAGAAAGTGGGTTGCATGTCCAAGTGCTaGAAGCCCCCAGCAGAGCCA | + |
|
Preference number: 4 (lower is better) Translates to: SIYRKSPEQGDPLRQKVGCMSKC*KPPAEP Trigger: TGGCTCTGCTGGGGGCTTCCAGCACTTGGACATGCA...ACCCACTTTCTGTCTCAATGGATCTCCCTGTTCTGGACTCTTCCTATAAATGGA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000067801.14 ENSMUST00000078509.12 ENSMUST00000118504.9 ENSMUST00000236853.2 |
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| 3UTR CAA 72 bp | ATAAATGGTTGTGAGCCACCATGTGAGAGTTGGGAATaGAACTCGGGTCCTCTGGAAGAGCAGCTAGTGCTC | + |
|
Preference number: 4 (lower is better) Translates to: INGCEPPCESWE*NSGPLEEQLVL Trigger: GAGCACTAGCTGCTCTTCCAGAGGACCCGAGTTCAATTCCCAACTCTCACATGGTGGCTCACAACCATTTAT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000236853.2 |
||
| CDS-3UTR TCA 90 bp | TCTCAGGTCACAGAAGCCCACCTTCATTTAAAACCCACACACTCCCATGCTAGGCAGTTGTCTCTTTTCTaGGTGCATGTCCAAGTGCTG | + |
|
Preference number: 4 (lower is better) Translates to: SQVTEAHLHLKPTHSHARQLSLF*VHVQVL Trigger: CAGCACTTGGACATGCACTCAGAAAAGAGACAACTG...CCTAGCATGGGAGTGTGTGGGTTTTAAATGAAGGTGGGCTTCTGTGACCTGAGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000067801.14 ENSMUST00000078509.12 ENSMUST00000118504.9 ENSMUST00000236853.2 |
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| CDS-3UTR TCA 90 bp | TCCATTTATAGGAAGAGTCCAGAACAGGGAGATCCATTGAGACAGAAAGTGGGTTTTGCAGACTTCGTCTaGTGGCCGCACCTTTCCAGC | + |
|
Preference number: 4 (lower is better) Translates to: SIYRKSPEQGDPLRQKVGFADFV*WPHLSS Trigger: GCTGGAAAGGTGCGGCCATCAGACGAAGTCTGCAAA...ACCCACTTTCTGTCTCAATGGATCTCCCTGTTCTGGACTCTTCCTATAAATGGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000067801.14 ENSMUST00000078509.12 ENSMUST00000118504.9 ENSMUST00000236853.2 |
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| CDS-3UTR GCA 90 bp | AGGAAGAGTCCAGAACAGGGAGATCCATTGAGACAGAAAGTGGGTGCTTGTCAGTGGACATGCCATTGCTaGAGTATTGGATCTGCTCGT | + |
|
Preference number: 4 (lower is better) Translates to: RKSPEQGDPLRQKVGACQWTCHC*SIGSAR Trigger: ACGAGCAGATCCAATACTGCAGCAATGGCATGTCCA...CTGACAAGCACCCACTTTCTGTCTCAATGGATCTCCCTGTTCTGGACTCTTCCT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000078509.12 ENSMUST00000118504.9 |
||
| CDS-3UTR CCA 90 bp | CCAGGTGGTGACACTTTGTGCAGGCACTTCACAGCTGTGGGTCTCAGGTCACAGAAATTTTGGGGGATTTaGTCAGCACTGTGTGATAAT | + |
|
Preference number: 4 (lower is better) Translates to: PGGDTLCRHFTAVGLRSQKFWGI*SALCDN Trigger: ATTATCACACAGTGCTGACCAAATCCCCCAAAATTT...CTGTGACCTGAGACCCACAGCTGTGAAGTGCCTGCACAAAGTGTCACCACCTGG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000067801.14 ENSMUST00000078509.12 ENSMUST00000118504.9 ENSMUST00000236853.2 |
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| 3UTR CAA 72 bp | GGCAAGCAGCAGTTTGTGGCATTATCTATACCAGGGTaGCCATTCTGTGTTCCCTTGTCTAAGCCACACTTG | + |
|
Preference number: 4 (lower is better) Translates to: GKQQFVALSIPG*PFCVPLSKPHL Trigger: CAAGTGTGGCTTAGACAAGGGAACACAGAATGGCAACCCTGGTATAGATAATGCCACAAACTGCTGCTTGCC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000236853.2 |
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| CDS-3UTR TCA 90 bp | TCCATTTATAGGAAGAGTCCAGAACAGGGAGATCCATTGAGACAGAAAGTGGGTGCAGGTCAATGGCAGTaGCAACCCCAAACACCATCT | + |
|
Preference number: 4 (lower is better) Translates to: SIYRKSPEQGDPLRQKVGAGQWQ*QPQTPS Trigger: AGATGGTGTTTGGGGTTGTCACTGCCATTGACCTGC...ACCCACTTTCTGTCTCAATGGATCTCCCTGTTCTGGACTCTTCCTATAAATGGA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000067801.14 ENSMUST00000078509.12 ENSMUST00000118504.9 ENSMUST00000236853.2 |
||
| CDS-3UTR GCA 90 bp | TCCATTTATAGGAAGAGTCCAGAACAGGGAGATCCATTGAGACAGAAAGTGGGTACACCATCTGCTGCTTaGTGGACATGCCATTGCTGC | + |
|
Preference number: 4 (lower is better) Translates to: SIYRKSPEQGDPLRQKVGTPSAA*WTCHCC Trigger: GCAGCAATGGCATGTCCAGCAAGCAGCAGATGGTGT...ACCCACTTTCTGTCTCAATGGATCTCCCTGTTCTGGACTCTTCCTATAAATGGA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000067801.14 ENSMUST00000078509.12 ENSMUST00000118504.9 ENSMUST00000236853.2 |
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| CDS-3UTR TCA 90 bp | TCGACACGACCACAGGTATGTGATTCCATTTATAGGAAGAGTCCAGAACAGGGACAGTTGTCTCTTTTCTaGGTGCATGTCCAAGTGCTG | + |
|
Preference number: 4 (lower is better) Translates to: STRPQVCDSIYRKSPEQGQLSLF*VHVQVL Trigger: CAGCACTTGGACATGCACTCAGAAAAGAGACAACTG...TCCCTGTTCTGGACTCTTCCTATAAATGGAATCACATACCTGTGGTCGTGTCGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000067801.14 ENSMUST00000236853.2 |
||
| CDS-3UTR CCA 90 bp | GCTTACCATCCCATACTCCATCTTTCCTGTTCCTGTCTGCTGCATCCTCCCTGCAAATTTTGGGGGATTTaGTCAGCACTGTGTGATAAT | + |
|
Preference number: 4 (lower is better) Translates to: AYHPILHLSCSCLLHPPCKFWGI*SALCDN Trigger: ATTATCACACAGTGCTGACCAAATCCCCCAAAATTT...GCAGGGAGGATGCAGCAGACAGGAACAGGAAAGATGGAGTATGGGATGGTAAGC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000236853.2 |
||
| 3UTR CAA 72 bp | TCCATTTATAGGAAGAGTCCAGAACAGGGAGATCCATaGAGACAGAAAGTGGGTGCTTGTCAGGGAAGGAGT | + |
|
Preference number: 4 (lower is better) Translates to: SIYRKSPEQGDP*RQKVGACQGRS Trigger: ACTCCTTCCCTGACAAGCACCCACTTTCTGTCTCAATGGATCTCCCTGTTCTGGACTCTTCCTATAAATGGA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000067801.14 ENSMUST00000078509.12 ENSMUST00000118504.9 ENSMUST00000236853.2 |
||
| CDS-3UTR TCA 90 bp | ACAAAAATCATTTGGCAGGGTAAAGCACAAAAATCATCCAAGCATTACAACTCTTCCAGCCAGCAGGGATaGCAGCATGTTCCCGAGGGT | + |
|
Preference number: 4 (lower is better) Translates to: TKIIWQGKAQKSSKHYNSSSQQG*QHVPEG Trigger: ACCCTCGGGAACATGCTGTCATCCCTGCTGGCTGGA...AGAGTTGTAATGCTTGGATGATTTTTGTGCTTTACCCTGCCAAATGATTTTTGT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000236853.2 |
||
| CDS-3UTR CCA 90 bp | GTCTGTGCCCATCCTTCCTGGCTAACATTCCTCAGTTCTGTGACACCAGAGGAAAAATTTTGGGGGATTTaGTCAGCACTGTGTGATAAT | + |
|
Preference number: 4 (lower is better) Translates to: VCAHPSWLTFLSSVTPEEKFWGI*SALCDN Trigger: ATTATCACACAGTGCTGACCAAATCCCCCAAAATTT...TTCCTCTGGTGTCACAGAACTGAGGAATGTTAGCCAGGAAGGATGGGCACAGAC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 4 transcripts: ENSMUST00000067801.14 ENSMUST00000078509.12 ENSMUST00000118504.9 ENSMUST00000236853.2 |
||
| 3UTR CAA 72 bp | TCAACCTTATGGGCTTGGTGCCTGCGTGTGTGTCTCTaGTATATGGAAATACCTGTTTTCCAGCTTACCATC | + |
|
Preference number: 4 (lower is better) Translates to: STLWAWCLRVCL*YMEIPVFQLTI Trigger: GATGGTAAGCTGGAAAACAGGTATTTCCATATACAAGAGACACACACGCAGGCACCAAGCCCATAAGGTTGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000236853.2 |
||
| CDS-3UTR CCA 90 bp | ACAAAAATCATTTGGCAGGGTAAAGCACAAAAATCATCCAAGCATTACAACTCTTGCATGTCCAAGTGCTaGAAGCCCCCAGCAGAGCCA | + |
|
Preference number: 4 (lower is better) Translates to: TKIIWQGKAQKSSKHYNSCMSKC*KPPAEP Trigger: TGGCTCTGCTGGGGGCTTCCAGCACTTGGACATGCA...AGAGTTGTAATGCTTGGATGATTTTTGTGCTTTACCCTGCCAAATGATTTTTGT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt. Matches the following 1 transcripts: ENSMUST00000236853.2 |
||
| CDS-3UTR CCA 90 bp | AGGAAGAGTCCAGAACAGGGAGATCCATTGAGACAGAAAGTGGGTGCTTGTCAGAAATTTTGGGGGATTTaGTCAGCACTGTGTGATAAT | + |
|
Preference number: 4 (lower is better) Translates to: RKSPEQGDPLRQKVGACQKFWGI*SALCDN Trigger: ATTATCACACAGTGCTGACCAAATCCCCCAAAATTT...CTGACAAGCACCCACTTTCTGTCTCAATGGATCTCCCTGTTCTGGACTCTTCCT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000067801.14 ENSMUST00000078509.12 ENSMUST00000118504.9 ENSMUST00000236853.2 |
||
| 3UTR CAA 72 bp | AATAGAACAATTCTAGAAGGATGTATTCAGTGGGGGTaGTCATCCAAGGCTAGTAGCATATTCCAAAAGCAG | + |
|
Preference number: 4 (lower is better) Translates to: NRTILEGCIQWG*SSKASSIFQKQ Trigger: CTGCTTTTGGAATATGCTACTAGCCTTGGATGACAACCCCCACTGAATACATCCTTCTAGAATTGTTCTATT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000236853.2 |
||
| CDS-3UTR CAA 90 bp | GCTGGCCTCAGCAGCCACCTGCTGGACTTGGGTGAGGAAGCTGGTAGGTGTCTCTTGAAGAACTCACACTaGGCCAAGAGCTCACACTTG | + |
|
Preference number: 5 (lower is better) Translates to: AGLSSHLLDLGEEAGRCLLKNSH*AKSSHL Trigger: CAAGTGTGAGCTCTTGGCCAAGTGTGAGTTCTTCAA...GAGACACCTACCAGCTTCCTCACCCAAGTCCAGCAGGTGGCTGCTGAGGCCAGC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000067801.14 ENSMUST00000078509.12 ENSMUST00000118504.9 ENSMUST00000236853.2 |
||
| CDS-3UTR CAA 90 bp | TGCCCATCCTTCCTGGCTAACATTCCTCAGTTCTGTGACACCAGAGGAAAGGCCTTGCTGGACATGCCATaGCTGCAGTCTGTGGGCCCC | + |
|
Preference number: 5 (lower is better) Translates to: CPSFLANIPQFCDTRGKALLDMP*LQSVGP Trigger: GGGGCCCACAGACTGCAGCAATGGCATGTCCAGCAA...GGCCTTTCCTCTGGTGTCACAGAACTGAGGAATGTTAGCCAGGAAGGATGGGCA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000067801.14 ENSMUST00000236853.2 |
||
| CDS-3UTR CAA 90 bp | GGGAGATCCATTGAGACAGAAAGTGGGTGCTTGTCAGGGAAGGAGTGGGACGTGGCCAAGAGCTCACACTaGAGACCGGCATTCTTTGAG | + |
|
Preference number: 5 (lower is better) Translates to: GRSIETESGCLSGKEWDVAKSSH*RPAFFE Trigger: CTCAAAGAATGCCGGTCTCAAGTGTGAGCTCTTGGC...CACGTCCCACTCCTTCCCTGACAAGCACCCACTTTCTGTCTCAATGGATCTCCC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000067801.14 ENSMUST00000078509.12 ENSMUST00000118504.9 ENSMUST00000236853.2 |
||
| CDS-3UTR CAA 90 bp | TGCCCATCCTTCCTGGCTAACATTCCTCAGTTCTGTGACACCAGAGGAAAGGCCAGCCCGATCCCTGTGTaGCCAGAAGTTGGCTCAATG | + |
|
Preference number: 5 (lower is better) Translates to: CPSFLANIPQFCDTRGKASPIPV*PEVGSM Trigger: CATTGAGCCAACTTCTGGCAACACAGGGATCGGGCT...GGCCTTTCCTCTGGTGTCACAGAACTGAGGAATGTTAGCCAGGAAGGATGGGCA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000067801.14 ENSMUST00000078509.12 ENSMUST00000118504.9 ENSMUST00000236853.2 |
||
| CDS-3UTR CAA 90 bp | TATGAGTACACTGTAGCTGTACAGATGGTTGTAAGCCTTCATGTGGTTGCTGGGTTGCTGGACATGCCATaGCTGCAGTCTGTGGGCCCC | + |
|
Preference number: 5 (lower is better) Translates to: YEYTVAVQMVVSLHVVAGLLDMP*LQSVGP Trigger: GGGGCCCACAGACTGCAGCAATGGCATGTCCAGCAA...CCCAGCAACCACATGAAGGCTTACAACCATCTGTACAGCTACAGTGTACTCATA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000236853.2 |
||
| CDS-3UTR CAA 90 bp | TCAGCAGCCACCTGCTGGACTTGGGTGAGGAAGCTGGTAGGTGTCTCTGAAAGCGCATTCTTTGAGATCTaGTTGATTCTGACCATAGGG | + |
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Preference number: 5 (lower is better) Translates to: SAATCWTWVRKLVGVSESAFFEI*LILTIG Trigger: CCCTATGGTCAGAATCAACAAGATCTCAAAGAATGC...GCTTTCAGAGACACCTACCAGCTTCCTCACCCAAGTCCAGCAGGTGGCTGCTGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000067801.14 ENSMUST00000078509.12 ENSMUST00000118504.9 ENSMUST00000236853.2 |
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| CDS-3UTR CAA 90 bp | GGTGACACTTTGTGCAGGCACTTCACAGCTGTGGGTCTCAGGTCACAGAAGCCCGCATTCTTTGAGATCTaGTTGATTCTGACCATAGGG | + |
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Preference number: 5 (lower is better) Translates to: GDTLCRHFTAVGLRSQKPAFFEI*LILTIG Trigger: CCCTATGGTCAGAATCAACAAGATCTCAAAGAATGC...GGGCTTCTGTGACCTGAGACCCACAGCTGTGAAGTGCCTGCACAAAGTGTCACC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000067801.14 ENSMUST00000078509.12 ENSMUST00000118504.9 ENSMUST00000236853.2 |
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| CDS-3UTR CAA 90 bp | AGATCCATTGAGACAGAAAGTGGGTGCTTGTCAGGGAAGGAGTGGGACGTGAGGTTGAAGAACTCACACTaGGCCAAGAGCTCACACTTG | + |
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Preference number: 5 (lower is better) Translates to: RSIETESGCLSGKEWDVRLKNSH*AKSSHL Trigger: CAAGTGTGAGCTCTTGGCCAAGTGTGAGTTCTTCAA...CCTCACGTCCCACTCCTTCCCTGACAAGCACCCACTTTCTGTCTCAATGGATCT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000067801.14 ENSMUST00000078509.12 ENSMUST00000118504.9 ENSMUST00000236853.2 |
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| CDS-3UTR CAA 90 bp | GCTTACCATCCCATACTCCATCTTTCCTGTTCCTGTCTGCTGCATCCTCCCTGCTTGAAGAACTCACACTaGGCCAAGAGCTCACACTTG | + |
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Preference number: 5 (lower is better) Translates to: AYHPILHLSCSCLLHPPCLKNSH*AKSSHL Trigger: CAAGTGTGAGCTCTTGGCCAAGTGTGAGTTCTTCAA...GCAGGGAGGATGCAGCAGACAGGAACAGGAAAGATGGAGTATGGGATGGTAAGC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000236853.2 |
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| CDS-3UTR CAA 90 bp | AGATCCATTGAGACAGAAAGTGGGTGCTTGTCAGGGAAGGAGTGGGACGTGAGGGCATTCTTTGAGATCTaGTTGATTCTGACCATAGGG | + |
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Preference number: 5 (lower is better) Translates to: RSIETESGCLSGKEWDVRAFFEI*LILTIG Trigger: CCCTATGGTCAGAATCAACAAGATCTCAAAGAATGC...CCTCACGTCCCACTCCTTCCCTGACAAGCACCCACTTTCTGTCTCAATGGATCT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000067801.14 ENSMUST00000078509.12 ENSMUST00000118504.9 ENSMUST00000236853.2 |
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| CDS-3UTR CAA 90 bp | TCTCAGGTCACAGAAGCCCACCTTCATTTAAAACCCACACACTCCCATGCTAGGTTGAAGAACTCACACTaGGCCAAGAGCTCACACTTG | + |
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Preference number: 5 (lower is better) Translates to: SQVTEAHLHLKPTHSHARLKNSH*AKSSHL Trigger: CAAGTGTGAGCTCTTGGCCAAGTGTGAGTTCTTCAA...CCTAGCATGGGAGTGTGTGGGTTTTAAATGAAGGTGGGCTTCTGTGACCTGAGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000067801.14 ENSMUST00000078509.12 ENSMUST00000118504.9 ENSMUST00000236853.2 |
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| CDS-3UTR CAA 90 bp | TCCATTTATAGGAAGAGTCCAGAACAGGGAGATCCATTGAGACAGAAAGTGGGTAGCCCGATCCCTGTGTaGCCAGAAGTTGGCTCAATG | + |
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Preference number: 5 (lower is better) Translates to: SIYRKSPEQGDPLRQKVGSPIPV*PEVGSM Trigger: CATTGAGCCAACTTCTGGCAACACAGGGATCGGGCT...ACCCACTTTCTGTCTCAATGGATCTCCCTGTTCTGGACTCTTCCTATAAATGGA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000067801.14 ENSMUST00000078509.12 ENSMUST00000118504.9 ENSMUST00000236853.2 |
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| CDS-3UTR CAA 90 bp | GGTCGACACGACCACAGGTATGTGATTCCATTTATAGGAAGAGTCCAGAACAGGGCATTCTTTGAGATCTaGTTGATTCTGACCATAGGG | + |
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Preference number: 5 (lower is better) Translates to: GRHDHRYVIPFIGRVQNRAFFEI*LILTIG Trigger: CCCTATGGTCAGAATCAACAAGATCTCAAAGAATGC...CCTGTTCTGGACTCTTCCTATAAATGGAATCACATACCTGTGGTCGTGTCGACC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000067801.14 ENSMUST00000236853.2 |
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| CDS-3UTR CAA 90 bp | GGGTTGTCATCCAAGGCTAGTAGCATATTCCAAAAGCAGGTTAATAAATCTCTAAGCCCGATCCCTGTGTaGCCAGAAGTTGGCTCAATG | + |
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Preference number: 5 (lower is better) Translates to: GLSSKASSIFQKQVNKSLSPIPV*PEVGSM Trigger: CATTGAGCCAACTTCTGGCAACACAGGGATCGGGCT...TAGAGATTTATTAACCTGCTTTTGGAATATGCTACTAGCCTTGGATGACAACCC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000236853.2 |
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| CDS GCA 72 bp | GCTCCCGGGCAGCCTTCACAGCCACAGCCATGGCGCTaGCAGAGCTTCCACCACATAGCAGTCCTTCCTGTG | + |
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Preference number: 6 (lower is better) Translates to: APGQPSQPQPWR*QSFHHIAVLPV Trigger: CACAGGAAGGACTGCTATGTGGTGGAAGCTCTGGCAGCGCCATGGCTGTGGCTGTGAAGGCTGCCCGGGAGC 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000067801.14 ENSMUST00000078509.12 ENSMUST00000118504.9 ENSMUST00000236853.2 |
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| CDS GCA 72 bp | CCCCAAACACCATCTGCTGCTTGCTGGACATGCCATTaGTGCAGTATTGGATCTGCTCGTGGACCACCAGGG | + |
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Preference number: 6 (lower is better) Translates to: PQTPSAACWTCH*CSIGSARGPPG Trigger: CCCTGGTGGTCCACGAGCAGATCCAATACTGCAGCAATGGCATGTCCAGCAAGCAGCAGATGGTGTTTGGGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000078509.12 ENSMUST00000118504.9 |
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| CDS TCA 72 bp | GCTCCGCAAGGATGGAGCCTTCAGGATCGACACCGATaGTTTTACAGCCAGGGCACTTCTCCTTCAGCTTTC | + |
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Preference number: 6 (lower is better) Translates to: APQGWSLQDRHR*FYSQGTSPSAF Trigger: GAAAGCTGAAGGAGAAGTGCCCTGGCTGTAAAATCATCGGTGTCGATCCTGAAGGCTCCATCCTTGCGGAGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000067801.14 ENSMUST00000078509.12 ENSMUST00000118504.9 ENSMUST00000128351.9 ENSMUST00000236853.2 |
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| CDS GCA 72 bp | AGCAGGTCAATGGCAGTGACAACCCCAAACACCATCTaGTGCTTGCTGGACATGCCATTGCTGCAGTCTGTG | + |
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Preference number: 6 (lower is better) Translates to: SRSMAVTTPNTI*CLLDMPLLQSV Trigger: CACAGACTGCAGCAATGGCATGTCCAGCAAGCAGCAGATGGTGTTTGGGGTTGTCACTGCCATTGACCTGCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000067801.14 ENSMUST00000236853.2 |
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| CDS CCA 72 bp | AGCCAGAGCCAGCCCGATCCCTGTGTTGCCAGAAGTTaGCTCAATGATAGTGTCTCCAGGCTTCAAGTTTCC | + |
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Preference number: 6 (lower is better) Translates to: SQSQPDPCVARS*LNDSVSRLQVS Trigger: GGAAACTTGAAGCCTGGAGACACTATCATTGAGCCAACTTCTGGCAACACAGGGATCGGGCTGGCTCTGGCT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 8 transcripts: ENSMUST00000067801.14 ENSMUST00000078509.12 ENSMUST00000118504.9 ENSMUST00000128351.9 ENSMUST00000135425.9 ENSMUST00000151718.3 ENSMUST00000155814.8 ENSMUST00000236853.2 |
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| CDS GCA 72 bp | TTCTCCAGTTGTCTCTTTTCTGAGTGCATGTCCAAGTaGTGGAAGCCCCCAGCAGAGCCATCTTCACACTGG | + |
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Preference number: 6 (lower is better) Translates to: FSSCLFSECMSK*WKPPAEPSSHW Trigger: CCAGTGTGAAGATGGCTCTGCTGGGGGCTTCCAGCACTTGGACATGCACTCAGAAAAGAGACAACTGGAGAA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 8 transcripts: ENSMUST00000067801.14 ENSMUST00000078509.12 ENSMUST00000118504.9 ENSMUST00000135425.9 ENSMUST00000151718.3 ENSMUST00000155814.8 ENSMUST00000236853.2 ENSMUST00000236909.2 |
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| CDS GCA 72 bp | AGCAGGTCAATGGCAGTGACAACCCCAAACACCATCTaGTGCTTGCTGGACATGCCATTGCTGCAGTATTGG | + |
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Preference number: 6 (lower is better) Translates to: SRSMAVTTPNTI*CLLDMPLLQYW Trigger: CCAATACTGCAGCAATGGCATGTCCAGCAAGCAGCAGATGGTGTTTGGGGTTGTCACTGCCATTGACCTGCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000078509.12 ENSMUST00000118504.9 |
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