Pregenerated sensors for CBLN3 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000040380Ensembl transcript IDs: ENSMUST00000063871.13, ENSMUST00000172378.2
Found 153 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | GATGGAGCCCGCAGGTACTATGAGGCTGGTCCATCTGGGCCCCTGTaGGAGCCTGTCAAGCTTACCTGCGCCACCTGTCACCAAATAGCG | + |
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Preference number: 1 (lower is better) Translates to: DGARRYYEAGPSGPL*EPVKLTCATCHQIA Trigger: CGCTATTTGGTGACAGGTGGCGCAGGTAAGCTTGACAGGCTCCCACAGGGGCCCAGATGGACCAGCCTCATAGTACCTGCGGGCTCCATC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000063871.13 ENSMUST00000172378.2 |
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| 3UTR CCA 90 bp | GCTGTCAGCCCTGTTCACAGGGTGCTGGCCGAGAGCTCTCATTGCTaGCATTCCTCACAGGATGGAGCCCGCAGGTACTATGAGGCTGGT | + |
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Preference number: 1 (lower is better) Translates to: AVSPVHRVLAESSHC*HSSQDGARRYYEAG Trigger: ACCAGCCTCATAGTACCTGCGGGCTCCATCCTGTGAGGAATGCCAGCAATGAGAGCTCTCGGCCAGCACCCTGTGAACAGGGCTGACAGC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000063871.13 ENSMUST00000172378.2 |
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| 3UTR TCA 90 bp | AGAGCAAACACACACACACACACACCCAAGCCTCTGGTCAGGCAATaGGGGCCAGAGTCCATTGGGACCTGGCACAGATGGACGGCAGGA | + |
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Preference number: 1 (lower is better) Translates to: RANTHTHTPKPLVRQ*GPESIGTWHRWTAG Trigger: TCCTGCCGTCCATCTGTGCCAGGTCCCAATGGACTCTGGCCCTCATTGCCTGACCAGAGGCTTGGGTGTGTGTGTGTGTGTGTTTGCTCT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000063871.13 ENSMUST00000172378.2 |
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| 3UTR TCA 90 bp | TCCATAAGGTGGCTCACTGCCACTGCAGTTCAGTCTCAAGGGATCTaGGGCACCCCCTCTGGCCTCCAAGGGAACTGCATGTATGTGGTG | + |
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Preference number: 1 (lower is better) Translates to: SIRWLTATAVQSQGI*GTPSGLQGNCMYVV Trigger: CACCACATACATGCAGTTCCCTTGGAGGCCAGAGGGGGTGCCTCAGATCCCTTGAGACTGAACTGCAGTGGCAGTGAGCCACCTTATGGA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000063871.13 |
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| 3UTR GCA 90 bp | GATCCAGCTTACACTCTCAGCATCCATAAGGTGGCTCACTGCCACTaGAGTTCAGTCTCAAGGGATCTGAGGCACCCCCTCTGGCCTCCA | + |
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Preference number: 1 (lower is better) Translates to: DPAYTLSIHKVAHCH*SSVSRDLRHPLWPP Trigger: TGGAGGCCAGAGGGGGTGCCTCAGATCCCTTGAGACTGAACTGCAGTGGCAGTGAGCCACCTTATGGATGCTGAGAGTGTAAGCTGGATC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000063871.13 |
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| 3UTR CCA 90 bp | CACTGCCACTGCAGTTCAGTCTCAAGGGATCTGAGGCACCCCCTCTaGCCTCCAAGGGAACTGCATGTATGTGGTGCACAGGCAAAACAC | + |
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Preference number: 1 (lower is better) Translates to: HCHCSSVSRDLRHPL*PPRELHVCGAQAKH Trigger: GTGTTTTGCCTGTGCACCACATACATGCAGTTCCCTTGGAGGCCAGAGGGGGTGCCTCAGATCCCTTGAGACTGAACTGCAGTGGCAGTG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000063871.13 |
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| 3UTR GCA 90 bp | ATTCTTCCTGGCCACAAAGTAAGGACAAATGCTGAAGGAAAGTGCTaGCCCTCCCCCTCTTGTCTACTCCCTACCCGCCTACCCCAGTGC | + |
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Preference number: 1 (lower is better) Translates to: ILPGHKVRTNAEGKC*PSPSCLLPTRLPQC Trigger: GCACTGGGGTAGGCGGGTAGGGAGTAGACAAGAGGGGGAGGGGCAGCACTTTCCTTCAGCATTTGTCCTTACTTTGTGGCCAGGAAGAAT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000063871.13 |
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| 3UTR GCA 90 bp | GTAGAGGATCCAGCTTACACTCTCAGCATCCATAAGGTGGCTCACTaGCACTGCAGTTCAGTCTCAAGGGATCTGAGGCACCCCCTCTGG | + |
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Preference number: 1 (lower is better) Translates to: VEDPAYTLSIHKVAH*HCSSVSRDLRHPLW Trigger: CCAGAGGGGGTGCCTCAGATCCCTTGAGACTGAACTGCAGTGGCAGTGAGCCACCTTATGGATGCTGAGAGTGTAAGCTGGATCCTCTAC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000063871.13 |
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| 3UTR GCA 90 bp | CTCACTCTACAGAGCAGGCTAGCCTTGAACTCACAGATAACCACCTaGCTCTGTCTCCCGAGGGCTGGGATTAAAGGTATGGGACATCCA | + |
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Preference number: 1 (lower is better) Translates to: LTLQSRLALNSQITT*LCLPRAGIKGMGHP Trigger: TGGATGTCCCATACCTTTAATCCCAGCCCTCGGGAGACAGAGGCAGGTGGTTATCTGTGAGTTCAAGGCTAGCCTGCTCTGTAGAGTGAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000063871.13 |
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| 3UTR GCA 90 bp | GAAGAAGTGCAAGCTTCTAGCCTTGGGTGTTTAACTATGATCTCATaGAAGGAGGTGGGCCGTAGGCAGCCTGGAGGGGGCCTTTCTCTT | + |
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Preference number: 1 (lower is better) Translates to: EEVQASSLGCLTMIS*KEVGRRQPGGGLSL Trigger: AAGAGAAAGGCCCCCTCCAGGCTGCCTACGGCCCACCTCCTTGCATGAGATCATAGTTAAACACCCAAGGCTAGAAGCTTGCACTTCTTC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000172378.2 |
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| 3UTR GCA 90 bp | TCAAGGAAGGAGCTGTGTTCTTTCTTCTCTCCCTTTTTCCAGCGCTaGTGGGATGTAATGCTGACCTGCACGAAGCCATCTTGGGCCATG | + |
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Preference number: 1 (lower is better) Translates to: SRKELCSFFSPFFQR*WDVMLTCTKPSWAM Trigger: CATGGCCCAAGATGGCTTCGTGCAGGTCAGCATTACATCCCAGCAGCGCTGGAAAAAGGGAGAGAAGAAAGAACACAGCTCCTTCCTTGA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000063871.13 |
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| 3UTR TCA 90 bp | GAGGTGGCTGAGGGAGAGGACATGTGGTTACTGATGACTCATTCGTaGCCTTTGACTCTGCCTCCAGGTCTGTATACCTGCTCTAGTTTC | + |
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Preference number: 1 (lower is better) Translates to: EVAEGEDMWLLMTHS*PLTLPPGLYTCSSF Trigger: GAAACTAGAGCAGGTATACAGACCTGGAGGCAGAGTCAAAGGTCACGAATGAGTCATCAGTAACCACATGTCCTCTCCCTCAGCCACCTC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000063871.13 ENSMUST00000172378.2 |
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| 3UTR TCA 90 bp | CTGGGAGACAGCTGGAGGAACTACATGTCGATCAAGAGTAGGGAGTaGCTGAAATTCAGATTTCCAAGGTGGGGCAGTTCTAGGAGGTGG | + |
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Preference number: 1 (lower is better) Translates to: LGDSWRNYMSIKSRE*LKFRFPRWGSSRRW Trigger: CCACCTCCTAGAACTGCCCCACCTTGGAAATCTGAATTTCAGTCACTCCCTACTCTTGATCGACATGTAGTTCCTCCAGCTGTCTCCCAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000063871.13 ENSMUST00000172378.2 |
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| 3UTR TCA 90 bp | TCTTGTTTAAACTATTCTTCCTGGCCACAAAGTAAGGACAAATGCTaGAGGAAAGTGCTGCCCCTCCCCCTCTTGTCTACTCCCTACCCG | + |
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Preference number: 1 (lower is better) Translates to: SCLNYSSWPQSKDKC*RKVLPLPLLSTPYP Trigger: CGGGTAGGGAGTAGACAAGAGGGGGAGGGGCAGCACTTTCCTTCAGCATTTGTCCTTACTTTGTGGCCAGGAAGAATAGTTTAAACAAGA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000063871.13 |
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| 3UTR TCA 90 bp | AGAAGGCAGAATTCCAGAAGGTTCCAGCTAGCCTGGTGTACGCAATaGAAAATTAGAGTCCCTGTCTCAAACATAGTGGGAGGTGGGGTC | + |
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Preference number: 1 (lower is better) Translates to: RRQNSRRFQLAWCTQ*KIRVPVSNIVGGGV Trigger: GACCCCACCTCCCACTATGTTTGAGACAGGGACTCTAATTTTTCATTGCGTACACCAGGCTAGCTGGAACCTTCTGGAATTCTGCCTTCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000063871.13 |
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| 3UTR TCA 90 bp | GCTGGGGTTCAAACCCAGTGCTTCATGCGTATTAGCGTCTGCCTCTaGGTGACACCTCCATCCTTATTTCTTTCTTTGTTCTGTCTCTGT | + |
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Preference number: 1 (lower is better) Translates to: AGVQTQCFMRISVCL*VTPPSLFLSLFCLC Trigger: ACAGAGACAGAACAAAGAAAGAAATAAGGATGGAGGTGTCACTCAGAGGCAGACGCTAATACGCATGAAGCACTGGGTTTGAACCCCAGC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000063871.13 |
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| 3UTR TCA 90 bp | CAAAAGGGAAGACTGGGCTCTGTGGTTCTAAGCAGCTGTTTATCCTaGACTCCCCAGCTGCAGACTCTTCCATGTGAGACAGAAATATTA | + |
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Preference number: 1 (lower is better) Translates to: QKGRLGSVVLSSCLS*TPQLQTLPCETEIL Trigger: TAATATTTCTGTCTCACATGGAAGAGTCTGCAGCTGGGGAGTTCAGGATAAACAGCTGCTTAGAACCACAGAGCCCAGTCTTCCCTTTTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000063871.13 |
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| 3UTR TCA 90 bp | ACACACACACACACACACGTCCCAGGTGCATGCACATGGAAAATATaGCAAAAAGGTAAGATTGTGAGATTGTTTCCTTGCCTGTCCTGG | + |
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Preference number: 1 (lower is better) Translates to: THTHTHVPGACTWKI*QKGKIVRLFPCLSW Trigger: CCAGGACAGGCAAGGAAACAATCTCACAATCTTACCTTTTTGTCATATTTTCCATGTGCATGCACCTGGGACGTGTGTGTGTGTGTGTGT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000063871.13 |
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| 3UTR GCA 90 bp | TTAAGTGCCAAGTTTACAGGTGTGTACCATCACACTAGGCTGGATTaGTCAGTTTTATTTTGTGTCAAGACAAGCCCTGGCTATCCTGGA | + |
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Preference number: 1 (lower is better) Translates to: LSAKFTGVYHHTRLD*SVLFCVKTSPGYPG Trigger: TCCAGGATAGCCAGGGCTTGTCTTGACACAAAATAAAACTGAGCAATCCAGCCTAGTGTGATGGTACACACCTGTAAACTTGGCACTTAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000063871.13 |
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| 3UTR GCA 90 bp | AAGTGTCTTCTTCTCTCTTTCCTTCTGGGAAGGAAGGGTACCACCTaGCACCTTATTTTCAGCGTTGTGAAACTTTATCAGAGAATAGTC | + |
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Preference number: 1 (lower is better) Translates to: KCLLLSFLLGRKGTT*HLIFSVVKLYQRIV Trigger: GACTATTCTCTGATAAAGTTTCACAACGCTGAAAATAAGGTGGCAGGTGGTACCCTTCCTTCCCAGAAGGAAAGAGAGAAGAAGACACTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000063871.13 |
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| 3UTR CCA 90 bp | AGAGTCTATACTCTAATCACCAAGATATCTCAATATGCGTTTACATaGCATGGGGACTTTGCAAATACACTGCTGGTGGGGACCTTAAAA | + |
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Preference number: 1 (lower is better) Translates to: RVYTLITKISQYAFT*HGDFANTLLVGTLK Trigger: TTTTAAGGTCCCCACCAGCAGTGTATTTGCAAAGTCCCCATGCCATGTAAACGCATATTGAGATATCTTGGTGATTAGAGTATAGACTCT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000063871.13 |
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| 3UTR TCA 90 bp | AAGCAGCTGTTTATCCTGAACTCCCCAGCTGCAGACTCTTCCATGTaGGACAGAAATATTATCTTATCTTGTTTAAACTATTCTTCCTGG | + |
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Preference number: 1 (lower is better) Translates to: KQLFILNSPAADSSM*DRNIILSCLNYSSW Trigger: CCAGGAAGAATAGTTTAAACAAGATAAGATAATATTTCTGTCTCACATGGAAGAGTCTGCAGCTGGGGAGTTCAGGATAAACAGCTGCTT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000063871.13 |
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| 3UTR TCA 90 bp | CATCCATTGTCCAATTTTAAACCTCCACTCTCACTATCATACAAATaGATTTGTAGTTATGAAGTGGATACTATCTCACTCAGACCAAGT | + |
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Preference number: 1 (lower is better) Translates to: HPLSNFKPPLSLSYK*ICSYEVDTISLRPS Trigger: ACTTGGTCTGAGTGAGATAGTATCCACTTCATAACTACAAATTCATTTGTATGATAGTGAGAGTGGAGGTTTAAAATTGGACAATGGATG 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000063871.13 |
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| 3UTR-3UTR CCA 90 bp | CCAGCTTACACTCTCAGCATCCATAAGGTGGCTCACTGCCACTGCAGTTCAGTCGTGGCAGGTTTAGGCTaGAGCCAGTCAGAGGGCGGG | + |
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Preference number: 2 (lower is better) Translates to: PAYTLSIHKVAHCHCSSVVAGLG*SQSEGG Trigger: CCCGCCCTCTGACTGGCTCCAGCCTAAACCTGCCAC...GACTGAACTGCAGTGGCAGTGAGCCACCTTATGGATGCTGAGAGTGTAAGCTGG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000063871.13 |
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| 3UTR-3UTR GCA 90 bp | TTCAGGGTAGGCACATGGCCCCATCCTGTCTCTCCAGCTACGGATGCTCTGTGGCCTGTCAAGCTTACCTaGGCCACCTGTCACCAAATA | + |
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Preference number: 2 (lower is better) Translates to: FRVGTWPHPVSPATDALWPVKLT*ATCHQI Trigger: TATTTGGTGACAGGTGGCGCAGGTAAGCTTGACAGG...CCACAGAGCATCCGTAGCTGGAGAGACAGGATGGGGCCATGTGCCTACCCTGAA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000063871.13 ENSMUST00000172378.2 |
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| 3UTR-3UTR CCA 90 bp | TGGTCAGGCAATGAGGGCCAGAGTCCATTGGGACCTGGCACAGATGGACGGCAGAAGATACTTTGTTTCTaGGGCAGGGAAGGGCAGAAA | + |
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Preference number: 2 (lower is better) Translates to: WSGNEGQSPLGPGTDGRQKILCF*GREGQK Trigger: TTTCTGCCCTTCCCTGCCCCAGAAACAAAGTATCTT...CTGCCGTCCATCTGTGCCAGGTCCCAATGGACTCTGGCCCTCATTGCCTGACCA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000063871.13 ENSMUST00000172378.2 |
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| 3UTR-3UTR CCA 90 bp | GCAGACTACAGGGAAATTAGCTGGGAGACAGCTGGAGGAACTACATGTCGATCACCATCTGGGCCCCTGTaGGAGCCTGTCAAGCTTACC | + |
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Preference number: 2 (lower is better) Translates to: ADYREISWETAGGTTCRSPSGPL*EPVKLT Trigger: GGTAAGCTTGACAGGCTCCCACAGGGGCCCAGATGG...TGATCGACATGTAGTTCCTCCAGCTGTCTCCCAGCTAATTTCCCTGTAGTCTGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000063871.13 ENSMUST00000172378.2 |
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| 3UTR-3UTR GCA 90 bp | CCGAGGGCTGGGATTAAAGGTATGGGACATCCATTGTCCAATTTTAAACCTCCAGCCTTAAACTGGAGCTaGGGAGGGGCAGGAGGGGCA | + |
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Preference number: 2 (lower is better) Translates to: PRAGIKGMGHPLSNFKPPALNWS*GGAGGA Trigger: TGCCCCTCCTGCCCCTCCGCAGCTCCAGTTTAAGGC...TGGAGGTTTAAAATTGGACAATGGATGTCCCATACCTTTAATCCCAGCCCTCGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000063871.13 |
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| 3UTR-3UTR GCA 90 bp | GACAGAGTTTATGTAGCCCAGGCTAGCCTTCAACTCCAGATCTTCCTGCTTCTGCAGAGGGCGGGGCTGTaGTGTGTGTGTTTTAGCTGG | + |
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Preference number: 2 (lower is better) Translates to: DRVYVAQASLQLQIFLLLQRAGL*CVCFSW Trigger: CCAGCTAAAACACACACAGCACAGCCCCGCCCTCTG...CAGAAGCAGGAAGATCTGGAGTTGAAGGCTAGCCTGGGCTACATAAACTCTGTC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000063871.13 |
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| 3UTR-3UTR GCA 90 bp | CTCCAGGTCTGTATACCTGCTCTAGTTTCCCCTATTAGCCAGAGCAAACACACAGCCCTGTTCACAGGGTaGTGGCCGAGAGCTCTCATT | + |
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Preference number: 2 (lower is better) Translates to: LQVCIPALVSPISQSKHTALFTG*WPRALI Trigger: AATGAGAGCTCTCGGCCAGCACCCTGTGAACAGGGC...TGTGTGTTTGCTCTGGCTAATAGGGGAAACTAGAGCAGGTATACAGACCTGGAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000063871.13 ENSMUST00000172378.2 |
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| 3UTR-3UTR GCA 90 bp | GACAGAGTTTATGTAGCCCAGGCTAGCCTTCAACTCCAGATCTTCCTGCTTCTGGGACGGCAGGATTCCTaGCTTCTGACTGTCCCAGTT | + |
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Preference number: 2 (lower is better) Translates to: DRVYVAQASLQLQIFLLLGRQDS*LLTVPV Trigger: AACTGGGACAGTCAGAAGGCAGGAATCCTGCCGTCC...CAGAAGCAGGAAGATCTGGAGTTGAAGGCTAGCCTGGGCTACATAAACTCTGTC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000063871.13 |
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| 3UTR-3UTR CCA 90 bp | GTTACTGATGACTCATTCGTGACCTTTGACTCTGCCTCCAGGTCTGTATACCTGAACCCTGCCTTAAACTaGAGCTGCGGAGGGGCAGGA | + |
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Preference number: 2 (lower is better) Translates to: VTDDSFVTFDSASRSVYLNPALN*SCGGAG Trigger: TCCTGCCCCTCCGCAGCTCCAGTTTAAGGCAGGGTT...CAGGTATACAGACCTGGAGGCAGAGTCAAAGGTCACGAATGAGTCATCAGTAAC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000063871.13 |
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| 3UTR-3UTR GCA 90 bp | GCAGACTACAGGGAAATTAGCTGGGAGACAGCTGGAGGAACTACATGTCGATCAGCCGAGAGCTCTCATTaGTGGCATTCCTCACAGGAT | + |
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Preference number: 2 (lower is better) Translates to: ADYREISWETAGGTTCRSAESSH*WHSSQD Trigger: ATCCTGTGAGGAATGCCAGCAATGAGAGCTCTCGGC...TGATCGACATGTAGTTCCTCCAGCTGTCTCCCAGCTAATTTCCCTGTAGTCTGC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000063871.13 ENSMUST00000172378.2 |
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| 3UTR-3UTR CCA 90 bp | GAGAGCTCTCATTGCTGGCATTCCTCACAGGATGGAGCCCGCAGGTACTATGAGAAGATACTTTGTTTCTaGGGCAGGGAAGGGCAGAAA | + |
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Preference number: 2 (lower is better) Translates to: ESSHCWHSSQDGARRYYEKILCF*GREGQK Trigger: TTTCTGCCCTTCCCTGCCCCAGAAACAAAGTATCTT...CTCATAGTACCTGCGGGCTCCATCCTGTGAGGAATGCCAGCAATGAGAGCTCTC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000063871.13 ENSMUST00000172378.2 |
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| 3UTR-3UTR CCA 90 bp | CAGGCTAGCCTTCAACTCCAGATCTTCCTGCTTCTGTCTTTTAAGTGCCAAGTTAGGGCCAGAGTCCATTaGGACCTGGCACAGATGGAC | + |
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Preference number: 2 (lower is better) Translates to: QASLQLQIFLLLSFKCQVRARVH*DLAQMD Trigger: GTCCATCTGTGCCAGGTCCCAATGGACTCTGGCCCT...AACTTGGCACTTAAAAGACAGAAGCAGGAAGATCTGGAGTTGAAGGCTAGCCTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000063871.13 |
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| 3UTR-3UTR TCA 90 bp | TACTCTAATCACCAAGATATCTCAATATGCGTTTACATGGCATGGGGACTTTGCAGCCATCTTGGGCCATaGGGCGGCATGCCAGAGAGG | + |
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Preference number: 2 (lower is better) Translates to: YSNHQDISICVYMAWGLCSHLGP*GGMPER Trigger: CCTCTCTGGCATGCCGCCTCATGGCCCAAGATGGCT...GCAAAGTCCCCATGCCATGTAAACGCATATTGAGATATCTTGGTGATTAGAGTA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000063871.13 |
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| 3UTR-3UTR GCA 90 bp | TCTCATTGCTGGCATTCCTCACAGGATGGAGCCCGCAGGTACTATGAGGCTGGTAGGGGGCCTTTCTCTTaGTCCAAAGATACTTTGTTT | + |
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Preference number: 2 (lower is better) Translates to: SHCWHSSQDGARRYYEAGRGPFS*SKDTLF Trigger: AAACAAAGTATCTTTGGAGCAAGAGAAAGGCCCCCT...ACCAGCCTCATAGTACCTGCGGGCTCCATCCTGTGAGGAATGCCAGCAATGAGA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000063871.13 ENSMUST00000172378.2 |
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| 3UTR-3UTR CCA 90 bp | TCTTTCTTTTGGACAGGTTTTACTATGGCTTGCCTGAAACTCACAGAGATCCACCCATCTGGGCCCCTGTaGGAGCCTGTCAAGCTTACC | + |
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Preference number: 2 (lower is better) Translates to: SFFWTGFTMACLKLTEIHPSGPL*EPVKLT Trigger: GGTAAGCTTGACAGGCTCCCACAGGGGCCCAGATGG...GTGGATCTCTGTGAGTTTCAGGCAAGCCATAGTAAAACCTGTCCAAAAGAAAGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000063871.13 |
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| 3UTR-3UTR CCA 90 bp | CAGGCTAGCCTTCAACTCCAGATCTTCCTGCTTCTGTCTTTTAAGTGCCAAGTTGCTACGGATGCTCTGTaGCCTTCCCCACACTGCTTT | + |
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Preference number: 2 (lower is better) Translates to: QASLQLQIFLLLSFKCQVATDAL*PSPHCF Trigger: AAAGCAGTGTGGGGAAGGCCACAGAGCATCCGTAGC...AACTTGGCACTTAAAAGACAGAAGCAGGAAGATCTGGAGTTGAAGGCTAGCCTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000063871.13 |
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| 3UTR-3UTR CCA 90 bp | GTCAAGACAAGCCCTGGCTATCCTGGAACTCACTCTACAGAGCAGGCTAGCCTTGGGGCATTTTCTTCATaGCAAGGAAGTCTTGGACTA | + |
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Preference number: 2 (lower is better) Translates to: VKTSPGYPGTHSTEQASLGAFSS*QGSLGL Trigger: TAGTCCAAGACTTCCTTGCCATGAAGAAAATGCCCC...AAGGCTAGCCTGCTCTGTAGAGTGAGTTCCAGGATAGCCAGGGCTTGTCTTGAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000063871.13 |
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| 3UTR-3UTR GCA 90 bp | TTTGAATTTATTTCTCTTCAGCATGCTGTAGTCCTGCAGTCCCTGTTTCACACCCTCTCCAGCTACGGATaGTCTGTGGCCTTCCCCACA | + |
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Preference number: 2 (lower is better) Translates to: FEFISLQHAVVLQSLFHTLSSYG*SVAFPT Trigger: TGTGGGGAAGGCCACAGAGCATCCGTAGCTGGAGAG...GGTGTGAAACAGGGACTGCAGGACTACAGCATGCTGAAGAGAAATAAATTCAAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000063871.13 |
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| 3UTR-3UTR CCA 90 bp | TCTTTCTTTTGGACAGGTTTTACTATGGCTTGCCTGAAACTCACAGAGATCCACACACACCCAAGCCTCTaGTCAGGCAATGAGGGCCAG | + |
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Preference number: 2 (lower is better) Translates to: SFFWTGFTMACLKLTEIHTHPSL*SGNEGQ Trigger: CTGGCCCTCATTGCCTGACCAGAGGCTTGGGTGTGT...GTGGATCTCTGTGAGTTTCAGGCAAGCCATAGTAAAACCTGTCCAAAAGAAAGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000063871.13 |
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| 3UTR-3UTR CCA 90 bp | CAGTGGTTAGAACACTTGCTGTGCACACCTGTTGGCCTGAGTTCATATTCCAGCTACAGGGAAATTAGCTaGGAGACAGCTGGAGGAACT | + |
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Preference number: 2 (lower is better) Translates to: QWLEHLLCTPVGLSSYSSYREIS*ETAGGT Trigger: AGTTCCTCCAGCTGTCTCCCAGCTAATTTCCCTGTA...GCTGGAATATGAACTCAGGCCAACAGGTGTGCACAGCAAGTGTTCTAACCACTG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000063871.13 |
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| 3UTR-3UTR TCA 90 bp | TTTGAATTTATTTCTCTTCAGCATGCTGTAGTCCTGCAGTCCCTGTTTCACACCGTTCTAGGAGGTGGCTaGGGGAGAGGACATGTGGTT | + |
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Preference number: 2 (lower is better) Translates to: FEFISLQHAVVLQSLFHTVLGGG*GRGHVV Trigger: AACCACATGTCCTCTCCCTCAGCCACCTCCTAGAAC...GGTGTGAAACAGGGACTGCAGGACTACAGCATGCTGAAGAGAAATAAATTCAAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000063871.13 |
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| 3UTR-3UTR TCA 90 bp | CCAGCTTACACTCTCAGCATCCATAAGGTGGCTCACTGCCACTGCAGTTCAGTCTGCTATGCCCAGCTTTaGATTTATTTCTCTTCAGCA | + |
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Preference number: 2 (lower is better) Translates to: PAYTLSIHKVAHCHCSSVCYAQL*IYFSSA Trigger: TGCTGAAGAGAAATAAATTCAAAGCTGGGCATAGCA...GACTGAACTGCAGTGGCAGTGAGCCACCTTATGGATGCTGAGAGTGTAAGCTGG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000063871.13 |
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| 3UTR-3UTR TCA 90 bp | GATCCAGCTTACACTCTCAGCATCCATAAGGTGGCTCACTGCCACTGCAGTTCACCGGTGTTAACGGGCTaGTCTAGTTTATTGTATTCT | + |
|
Preference number: 2 (lower is better) Translates to: DPAYTLSIHKVAHCHCSSPVLTG*SSLLYS Trigger: AGAATACAATAAACTAGATCAGCCCGTTAACACCGG...TGAACTGCAGTGGCAGTGAGCCACCTTATGGATGCTGAGAGTGTAAGCTGGATC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000063871.13 |
||
| 3UTR-3UTR TCA 90 bp | TACTCTAATCACCAAGATATCTCAATATGCGTTTACATGGCATGGGGACTTTGCGCTTGGTCTACAAAGTaGGTTCCAGGACAGCCAGGG | + |
|
Preference number: 2 (lower is better) Translates to: YSNHQDISICVYMAWGLCAWSTK*VPGQPG Trigger: CCCTGGCTGTCCTGGAACTCACTTTGTAGACCAAGC...GCAAAGTCCCCATGCCATGTAAACGCATATTGAGATATCTTGGTGATTAGAGTA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000063871.13 |
||
| 3UTR-3UTR CCA 90 bp | GACAGAGTTTATGTAGCCCAGGCTAGCCTTCAACTCCAGATCTTCCTGCTTCTGCAAGACATCTGTTTCTaGGTCAAAAGAAAAGAGGGG | + |
|
Preference number: 2 (lower is better) Translates to: DRVYVAQASLQLQIFLLLQDICF*VKRKEG Trigger: CCCCTCTTTTCTTTTGACCCAGAAACAGATGTCTTG...CAGAAGCAGGAAGATCTGGAGTTGAAGGCTAGCCTGGGCTACATAAACTCTGTC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000063871.13 |
||
| 3UTR-3UTR GCA 90 bp | AAGCCTATGTTGATCTTCTTTGTCTTGAGTATCTCAGTGGGTGAATTGTGCCAATCACAGAGATCCACCTaGCTCTGTCTCCTGAATGAA | + |
|
Preference number: 2 (lower is better) Translates to: KPMLIFFVLSISVGELCQSQRST*LCLLNE Trigger: TTCATTCAGGAGACAGAGGCAGGTGGATCTCTGTGA...TTGGCACAATTCACCCACTGAGATACTCAAGACAAAGAAGATCAACATAGGCTT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000063871.13 |
||
| 3UTR-3UTR CCA 90 bp | ACACCTCCATCCTTATTTCTTTCTTTGTTCTGTCTCTGTCTCTCTGTCTTTCTTGAGGGAGAGGACATGTaGTTACTGATGACTCATTCG | + |
|
Preference number: 2 (lower is better) Translates to: TPPSLFLSLFCLCLSVFLEGEDM*LLMTHS Trigger: CGAATGAGTCATCAGTAACCACATGTCCTCTCCCTC...AAGAAAGACAGAGAGACAGAGACAGAACAAAGAAAGAAATAAGGATGGAGGTGT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000063871.13 |
||
| 3UTR-3UTR GCA 90 bp | AAGCCTATGTTGATCTTCTTTGTCTTGAGTATCTCAGTGGGTGAATTGTGCCAAAGGGGGCCTTTCTCTTaGTCCAAAGATACTTTGTTT | + |
|
Preference number: 2 (lower is better) Translates to: KPMLIFFVLSISVGELCQRGPFS*SKDTLF Trigger: AAACAAAGTATCTTTGGAGCAAGAGAAAGGCCCCCT...TTGGCACAATTCACCCACTGAGATACTCAAGACAAAGAAGATCAACATAGGCTT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000063871.13 |
||
| 3UTR-3UTR CCA 90 bp | TACTCTAATCACCAAGATATCTCAATATGCGTTTACATGGCATGGGGACTTTGCCAGGAACTTTTCCTATaGACATCAGAAAGATGTGGC | + |
|
Preference number: 2 (lower is better) Translates to: YSNHQDISICVYMAWGLCQELFL*TSERCG Trigger: GCCACATCTTTCTGATGTCCATAGGAAAAGTTCCTG...GCAAAGTCCCCATGCCATGTAAACGCATATTGAGATATCTTGGTGATTAGAGTA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000063871.13 |
||
| 3UTR TCA 72 bp | CTGGCATTCCTCACAGGATGGAGCCCGCAGGTACTATaGGGCTGGTCCATCTGGGCCCCTGTGGGAGCCTGT | + |
|
Preference number: 3 (lower is better) Translates to: LAFLTGWSPQVL*GWSIWAPVGAC Trigger: ACAGGCTCCCACAGGGGCCCAGATGGACCAGCCTCATAGTACCTGCGGGCTCCATCCTGTGAGGAATGCCAG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000063871.13 ENSMUST00000172378.2 |
||
| 3UTR GCA 72 bp | AGCCCTGTTCACAGGGTGCTGGCCGAGAGCTCTCATTaGTGGCATTCCTCACAGGATGGAGCCCGCAGGTAC | + |
|
Preference number: 3 (lower is better) Translates to: SPVHRVLAESSH*WHSSQDGARRY Trigger: GTACCTGCGGGCTCCATCCTGTGAGGAATGCCAGCAATGAGAGCTCTCGGCCAGCACCCTGTGAACAGGGCT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000063871.13 ENSMUST00000172378.2 |
||
| 3UTR GCA 72 bp | GACCTGCACGAAGCCATCTTGGGCCATGAGGCGGCATaGCAGAGAGGCATCCCAAAAGGGAAGACTGGGCTC | + |
|
Preference number: 3 (lower is better) Translates to: DLHEAILGHEAA*QRGIPKGKTGL Trigger: GAGCCCAGTCTTCCCTTTTGGGATGCCTCTCTGGCATGCCGCCTCATGGCCCAAGATGGCTTCGTGCAGGTC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000063871.13 |
||
| 3UTR TCA 72 bp | TGGCTCACTGCCACTGCAGTTCAGTCTCAAGGGATCTaGGGCACCCCCTCTGGCCTCCAAGGGAACTGCATG | + |
|
Preference number: 3 (lower is better) Translates to: WLTATAVQSQGI*GTPSGLQGNCM Trigger: CATGCAGTTCCCTTGGAGGCCAGAGGGGGTGCCTCAGATCCCTTGAGACTGAACTGCAGTGGCAGTGAGCCA 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000063871.13 |
||
| 3UTR-3UTR CAA 90 bp | CACAGGATGGAGCCCGCAGGTACTATGAGGCTGGTCCATCTGGGCCCCTGTGGGTGCTCCAAAGATACTTaGTTTCTGGGGCAGGGAAGG | + |
|
Preference number: 3 (lower is better) Translates to: HRMEPAGTMRLVHLGPCGCSKDT*FLGQGR Trigger: CCTTCCCTGCCCCAGAAACAAAGTATCTTTGGAGCA...CCCACAGGGGCCCAGATGGACCAGCCTCATAGTACCTGCGGGCTCCATCCTGTG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000063871.13 ENSMUST00000172378.2 |
||
| 3UTR-3UTR CAA 90 bp | CAGGGTAGGCACATGGCCCCATCCTGTCTCTCCAGCTACGGATGCTCTGTGGCCTGCTCCAAAGATACTTaGTTTCTGGGGCAGGGAAGG | + |
|
Preference number: 3 (lower is better) Translates to: QGRHMAPSCLSSYGCSVACSKDT*FLGQGR Trigger: CCTTCCCTGCCCCAGAAACAAAGTATCTTTGGAGCA...GGCCACAGAGCATCCGTAGCTGGAGAGACAGGATGGGGCCATGTGCCTACCCTG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000063871.13 ENSMUST00000172378.2 |
||
| 3UTR-3UTR CAA 90 bp | CCAGCTTACACTCTCAGCATCCATAAGGTGGCTCACTGCCACTGCAGTTCAGTCCTGCACGAAGCCATCTaGGGCCATGAGGCGGCATGC | + |
|
Preference number: 3 (lower is better) Translates to: PAYTLSIHKVAHCHCSSVLHEAI*GHEAAC Trigger: GCATGCCGCCTCATGGCCCAAGATGGCTTCGTGCAG...GACTGAACTGCAGTGGCAGTGAGCCACCTTATGGATGCTGAGAGTGTAAGCTGG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000063871.13 |
||
| 3UTR TCA 72 bp | ACACACACACACACACCCAAGCCTCTGGTCAGGCAATaGGGGCCAGAGTCCATTGGGACCTGGCACAGATGG | + |
|
Preference number: 3 (lower is better) Translates to: THTHTPKPLVRQ*GPESIGTWHRW Trigger: CCATCTGTGCCAGGTCCCAATGGACTCTGGCCCTCATTGCCTGACCAGAGGCTTGGGTGTGTGTGTGTGTGT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000063871.13 ENSMUST00000172378.2 |
||
| 3UTR GCA 72 bp | TCTGCTCCTAGCCTTGGGTGTTTAACTATGATCTCATaGAAGGAGGTGGGCCGTAGGCAGCCTGGAGGGGGC | + |
|
Preference number: 3 (lower is better) Translates to: SAPSLGCLTMIS*KEVGRRQPGGG Trigger: GCCCCCTCCAGGCTGCCTACGGCCCACCTCCTTGCATGAGATCATAGTTAAACACCCAAGGCTAGGAGCAGA 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000063871.13 |
||
| 3UTR CCA 72 bp | CCTGTTCACAGGGTGCTGGCCGAGAGCTCTCATTGCTaGCATTCCTCACAGGATGGAGCCCGCAGGTACTAT | + |
|
Preference number: 3 (lower is better) Translates to: PVHRVLAESSHC*HSSQDGARRYY Trigger: ATAGTACCTGCGGGCTCCATCCTGTGAGGAATGCCAGCAATGAGAGCTCTCGGCCAGCACCCTGTGAACAGG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000063871.13 ENSMUST00000172378.2 |
||
| 3UTR GCA 72 bp | CCTGGCCACAAAGTAAGGACAAATGCTGAAGGAAAGTaGTGCCCCTCCCCCTCTTGTCTACTCCCTACCCGC | + |
|
Preference number: 3 (lower is better) Translates to: PGHKVRTNAEGK*CPSPSCLLPTR Trigger: GCGGGTAGGGAGTAGACAAGAGGGGGAGGGGCAGCACTTTCCTTCAGCATTTGTCCTTACTTTGTGGCCAGG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000063871.13 |
||
| 3UTR GCA 72 bp | CAAGCTTCTAGCCTTGGGTGTTTAACTATGATCTCATaGAAGGAGGTGGGCCGTAGGCAGCCTGGAGGGGGC | + |
|
Preference number: 3 (lower is better) Translates to: QASSLGCLTMIS*KEVGRRQPGGG Trigger: GCCCCCTCCAGGCTGCCTACGGCCCACCTCCTTGCATGAGATCATAGTTAAACACCCAAGGCTAGAAGCTTG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000172378.2 |
||
| 3UTR-3UTR CAA 90 bp | GGCCATGAGGCGGCATGCCAGAGAGGCATCCCAAAAGGGAAGACTGGGCTCTGTGAGGGGGCCTTTCTCTaGCTCCAAAGATACTTTGTT | + |
|
Preference number: 3 (lower is better) Translates to: GHEAACQRGIPKGKTGLCEGAFL*LQRYFV Trigger: AACAAAGTATCTTTGGAGCAAGAGAAAGGCCCCCTC...ACAGAGCCCAGTCTTCCCTTTTGGGATGCCTCTCTGGCATGCCGCCTCATGGCC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000063871.13 |
||
| 3UTR GCA 72 bp | TACACTCTCAGCATCCATAAGGTGGCTCACTGCCACTaGAGTTCAGTCTCAAGGGATCTGAGGCACCCCCTC | + |
|
Preference number: 3 (lower is better) Translates to: YTLSIHKVAHCH*SSVSRDLRHPL Trigger: GAGGGGGTGCCTCAGATCCCTTGAGACTGAACTGCAGTGGCAGTGAGCCACCTTATGGATGCTGAGAGTGTA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000063871.13 |
||
| 3UTR GCA 72 bp | CCAGCTTACACTCTCAGCATCCATAAGGTGGCTCACTaGCACTGCAGTTCAGTCTCAAGGGATCTGAGGCAC | + |
|
Preference number: 3 (lower is better) Translates to: PAYTLSIHKVAH*HCSSVSRDLRH Trigger: GTGCCTCAGATCCCTTGAGACTGAACTGCAGTGGCAGTGAGCCACCTTATGGATGCTGAGAGTGTAAGCTGG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000063871.13 |
||
| 3UTR CCA 72 bp | TACCTGCAGAATGTTTACATGTTCAGGGTAGGCACATaGCCCCATCCTGTCTCTCCAGCTACGGATGCTCTG | + |
|
Preference number: 3 (lower is better) Translates to: YLQNVYMFRVGT*PHPVSPATDAL Trigger: CAGAGCATCCGTAGCTGGAGAGACAGGATGGGGCCATGTGCCTACCCTGAACATGTAAACATTCTGCAGGTA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000063871.13 ENSMUST00000172378.2 |
||
| 3UTR-3UTR CAA 90 bp | TCTCATTGCTGGCATTCCTCACAGGATGGAGCCCGCAGGTACTATGAGGCTGGTGAGGGGGCCTTTCTCTaGCTCCAAAGATACTTTGTT | + |
|
Preference number: 3 (lower is better) Translates to: SHCWHSSQDGARRYYEAGEGAFL*LQRYFV Trigger: AACAAAGTATCTTTGGAGCAAGAGAAAGGCCCCCTC...ACCAGCCTCATAGTACCTGCGGGCTCCATCCTGTGAGGAATGCCAGCAATGAGA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000063871.13 ENSMUST00000172378.2 |
||
| 3UTR TCA 72 bp | GAGGGAGAGGACATGTGGTTACTGATGACTCATTCGTaGCCTTTGACTCTGCCTCCAGGTCTGTATACCTGC | + |
|
Preference number: 3 (lower is better) Translates to: EGEDMWLLMTHS*PLTLPPGLYTC Trigger: GCAGGTATACAGACCTGGAGGCAGAGTCAAAGGTCACGAATGAGTCATCAGTAACCACATGTCCTCTCCCTC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000063871.13 ENSMUST00000172378.2 |
||
| 3UTR GCA 72 bp | GAGCTGTGTTCTTTCTTCTCTCCCTTTTTCCAGCGCTaGTGGGATGTAATGCTGACCTGCACGAAGCCATCT | + |
|
Preference number: 3 (lower is better) Translates to: ELCSFFSPFFQR*WDVMLTCTKPS Trigger: AGATGGCTTCGTGCAGGTCAGCATTACATCCCAGCAGCGCTGGAAAAAGGGAGAGAAGAAAGAACACAGCTC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000063871.13 |
||
| 3UTR CCA 72 bp | AAAGGTAAGATTGTGAGATTGTTTCCTTGCCTGTCCTaGCTTGGTGTGGCCAAGTGTGACTCCATTCTGGCG | + |
|
Preference number: 3 (lower is better) Translates to: KGKIVRLFPCLS*LGVAKCDSILA Trigger: CGCCAGAATGGAGTCACACTTGGCCACACCAAGCCAGGACAGGCAAGGAAACAATCTCACAATCTTACCTTT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000063871.13 |
||
| 3UTR-3UTR CAA 90 bp | CAGTGGTTAGAACACTTGCTGTGCACACCTGTTGGCCTGAGTTCATATTCCAGCGGTAAGATTGTGAGATaGTTTCCTTGCCTGTCCTGG | + |
|
Preference number: 3 (lower is better) Translates to: QWLEHLLCTPVGLSSYSSGKIVR*FPCLSW Trigger: CCAGGACAGGCAAGGAAACAATCTCACAATCTTACC...GCTGGAATATGAACTCAGGCCAACAGGTGTGCACAGCAAGTGTTCTAACCACTG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000063871.13 |
||
| 3UTR TCA 72 bp | AACTATTCTTCCTGGCCACAAAGTAAGGACAAATGCTaGAGGAAAGTGCTGCCCCTCCCCCTCTTGTCTACT | + |
|
Preference number: 3 (lower is better) Translates to: NYSSWPQSKDKC*RKVLPLPLLST Trigger: AGTAGACAAGAGGGGGAGGGGCAGCACTTTCCTTCAGCATTTGTCCTTACTTTGTGGCCAGGAAGAATAGTT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000063871.13 |
||
| 3UTR TCA 72 bp | GGAGGAACTACATGTCGATCAAGAGTAGGGAGTGACTaGAATTCAGATTTCCAAGGTGGGGCAGTTCTAGGA | + |
|
Preference number: 3 (lower is better) Translates to: GGTTCRSRVGSD*NSDFQGGAVLG Trigger: TCCTAGAACTGCCCCACCTTGGAAATCTGAATTTCAGTCACTCCCTACTCTTGATCGACATGTAGTTCCTCC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000063871.13 ENSMUST00000172378.2 |
||
| 3UTR TCA 72 bp | AGCTGGAGGAACTACATGTCGATCAAGAGTAGGGAGTaGCTGAAATTCAGATTTCCAAGGTGGGGCAGTTCT | + |
|
Preference number: 3 (lower is better) Translates to: SWRNYMSIKSRE*LKFRFPRWGSS Trigger: AGAACTGCCCCACCTTGGAAATCTGAATTTCAGTCACTCCCTACTCTTGATCGACATGTAGTTCCTCCAGCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000063871.13 ENSMUST00000172378.2 |
||
| 3UTR TCA 72 bp | TGTCTTTCTTTTGGACAGGTTTTACTATGGCTTGCCTaGAACTCACAGAGATCCACCTGCCTCTGTCTCCTG | + |
|
Preference number: 3 (lower is better) Translates to: CLSFGQVLLWLA*NSQRSTCLCLL Trigger: CAGGAGACAGAGGCAGGTGGATCTCTGTGAGTTTCAGGCAAGCCATAGTAAAACCTGTCCAAAAGAAAGACA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000063871.13 |
||
| 3UTR TCA 72 bp | CCCAGTGCTTCATGCGTATTAGCGTCTGCCTCTGAGTaGCACCTCCATCCTTATTTCTTTCTTTGTTCTGTC | + |
|
Preference number: 3 (lower is better) Translates to: PSASCVLASASE*HLHPYFFLCSV Trigger: GACAGAACAAAGAAAGAAATAAGGATGGAGGTGTCACTCAGAGGCAGACGCTAATACGCATGAAGCACTGGG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000063871.13 |
||
| 3UTR TCA 72 bp | CAAACCCAGTGCTTCATGCGTATTAGCGTCTGCCTCTaGGTGACACCTCCATCCTTATTTCTTTCTTTGTTC | + |
|
Preference number: 3 (lower is better) Translates to: QTQCFMRISVCL*VTPPSLFLSLF Trigger: GAACAAAGAAAGAAATAAGGATGGAGGTGTCACTCAGAGGCAGACGCTAATACGCATGAAGCACTGGGTTTG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000063871.13 |
||
| 3UTR GCA 72 bp | TCTCTGTCTTTCTTTTGGACAGGTTTTACTATGGCTTaGCTGAAACTCACAGAGATCCACCTGCCTCTGTCT | + |
|
Preference number: 3 (lower is better) Translates to: SLSFFWTGFTMA*LKLTEIHLPLS Trigger: AGACAGAGGCAGGTGGATCTCTGTGAGTTTCAGGCAAGCCATAGTAAAACCTGTCCAAAAGAAAGACAGAGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000063871.13 |
||
| 3UTR CCA 72 bp | CCTTACTATAAGATCCTGATTTTGGATGTGATGGCCTaGAATAAAGTCTACGGGCTTTGGAGGTGGTCCAGT | + |
|
Preference number: 3 (lower is better) Translates to: PYYKILILDVMA*NKVYGLWRWSS Trigger: ACTGGACCACCTCCAAAGCCCGTAGACTTTATTCCAGGCCATCACATCCAAAATCAGGATCTTATAGTAAGG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000063871.13 |
||
| 3UTR TCA 72 bp | AATTCCAGAAGGTTCCAGCTAGCCTGGTGTACGCAATaGAAAATTAGAGTCCCTGTCTCAAACATAGTGGGA | + |
|
Preference number: 3 (lower is better) Translates to: NSRRFQLAWCTQ*KIRVPVSNIVG Trigger: TCCCACTATGTTTGAGACAGGGACTCTAATTTTTCATTGCGTACACCAGGCTAGCTGGAACCTTCTGGAATT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000063871.13 |
||
| 3UTR GCA 72 bp | AAGTTTACAGGTGTGTACCATCACACTAGGCTGGATTaGTCAGTTTTATTTTGTGTCAAGACAAGCCCTGGC | + |
|
Preference number: 3 (lower is better) Translates to: KFTGVYHHTRLD*SVLFCVKTSPG Trigger: GCCAGGGCTTGTCTTGACACAAAATAAAACTGAGCAATCCAGCCTAGTGTGATGGTACACACCTGTAAACTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000063871.13 |
||
| 3UTR CCA 72 bp | ACTCTAATCACCAAGATATCTCAATATGCGTTTACATaGCATGGGGACTTTGCAAATACACTGCTGGTGGGG | + |
|
Preference number: 3 (lower is better) Translates to: TLITKISQYAFT*HGDFANTLLVG Trigger: CCCCACCAGCAGTGTATTTGCAAAGTCCCCATGCCATGTAAACGCATATTGAGATATCTTGGTGATTAGAGT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000063871.13 |
||
| 3UTR CCA 72 bp | GTGCCAAGTTTACAGGTGTGTACCATCACACTAGGCTaGATTGCTCAGTTTTATTTTGTGTCAAGACAAGCC | + |
|
Preference number: 3 (lower is better) Translates to: VPSLQVCTITLG*IAQFYFVSRQA Trigger: GGCTTGTCTTGACACAAAATAAAACTGAGCAATCCAGCCTAGTGTGATGGTACACACCTGTAAACTTGGCAC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000063871.13 |
||
| 3UTR-3UTR CAA 90 bp | CCGAGGGCTGGGATTAAAGGTATGGGACATCCATTGTCCAATTTTAAACCTCCATCACTCAGACCAAGTTaGGATTTGGTCTTCAAATGT | + |
|
Preference number: 3 (lower is better) Translates to: PRAGIKGMGHPLSNFKPPSLRPS*DLVFKC Trigger: ACATTTGAAGACCAAATCCAAACTTGGTCTGAGTGA...TGGAGGTTTAAAATTGGACAATGGATGTCCCATACCTTTAATCCCAGCCCTCGG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000063871.13 |
||
| 3UTR TCA 72 bp | ATAAAGAGCATCGTGTACCTCCCGGTGTTAACGGGCTaGTCTAGTTTATTGTATTCTGAAAAACTTCCAATG | + |
|
Preference number: 3 (lower is better) Translates to: IKSIVYLPVLTG*SSLLYSEKLPM Trigger: CATTGGAAGTTTTTCAGAATACAATAAACTAGATCAGCCCGTTAACACCGGGAGGTACACGATGCTCTTTAT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000063871.13 |
||
| 3UTR TCA 72 bp | TATCAGCACTACAGCTCTAAGGGATTGAGCACTAAATaGATTTGGAAGTGTCTTCTTCTCTCTTTCCTTCTG | + |
|
Preference number: 3 (lower is better) Translates to: YQHYSSKGLSTK*IWKCLLLSFLL Trigger: CAGAAGGAAAGAGAGAAGAAGACACTTCCAAATTCATTTAGTGCTCAATCCCTTAGAGCTGTAGTGCTGATA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000063871.13 |
||
| 3UTR GCA 72 bp | CAGAGTCTATACTCTAATCACCAAGATATCTCAATATaGGTTTACATGGCATGGGGACTTTGCAAATACACT | + |
|
Preference number: 3 (lower is better) Translates to: QSLYSNHQDISI*VYMAWGLCKYT Trigger: AGTGTATTTGCAAAGTCCCCATGCCATGTAAACGCATATTGAGATATCTTGGTGATTAGAGTATAGACTCTG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000063871.13 |
||
| 3UTR TCA 72 bp | TTTATCCTGAACTCCCCAGCTGCAGACTCTTCCATGTaGGACAGAAATATTATCTTATCTTGTTTAAACTAT | + |
|
Preference number: 3 (lower is better) Translates to: FILNSPAADSSM*DRNIILSCLNY Trigger: ATAGTTTAAACAAGATAAGATAATATTTCTGTCTCACATGGAAGAGTCTGCAGCTGGGGAGTTCAGGATAAA 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000063871.13 |
||
| 3UTR TCA 72 bp | TATGTTGATCTTCTTTGTCTTGAGTATCTCAGTGGGTaGATTGTGCCAAGTGTTTTCTCAAAACATCATCTT | + |
|
Preference number: 3 (lower is better) Translates to: YVDLLCLEYLSG*IVPSVFSKHHL Trigger: AAGATGATGTTTTGAGAAAACACTTGGCACAATTCACCCACTGAGATACTCAAGACAAAGAAGATCAACATA 36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000063871.13 |
||
| 3UTR CCA 72 bp | TCTCACTATCATACAAATGAATTTGTAGTTATGAAGTaGATACTATCTCACTCAGACCAAGTTTGGATTTGG | + |
|
Preference number: 3 (lower is better) Translates to: SHYHTNEFVVMK*ILSHSDQVWIW Trigger: CCAAATCCAAACTTGGTCTGAGTGAGATAGTATCCACTTCATAACTACAAATTCATTTGTATGATAGTGAGA 35% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000063871.13 |
||
| CDS-3UTR GCA 90 bp | GCAATGAGGGCCAGAGTCCATTGGGACCTGGCACAGATGGACGGCAGGATTCCTCACTCGTCCTGGGGGTaGCTCTCCCAGGGCTGCACC | + |
|
Preference number: 4 (lower is better) Translates to: AMRARVHWDLAQMDGRIPHSSWG*LSQGCT Trigger: GGTGCAGCCCTGGGAGAGGCACCCCCAGGACGAGTG...AGGAATCCTGCCGTCCATCTGTGCCAGGTCCCAATGGACTCTGGCCCTCATTGC 63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000063871.13 ENSMUST00000172378.2 |
||
| CDS-3UTR TCA 90 bp | GCAATGAGGGCCAGAGTCCATTGGGACCTGGCACAGATGGACGGCAGGATTCCTGGCTCTGACCCTTCTTaGGCCCACCCAGCCTCCAGG | + |
|
Preference number: 4 (lower is better) Translates to: AMRARVHWDLAQMDGRIPGSDPS*AHPASR Trigger: CCTGGAGGCTGGGTGGGCTCAAGAAGGGTCAGAGCC...AGGAATCCTGCCGTCCATCTGTGCCAGGTCCCAATGGACTCTGGCCCTCATTGC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000063871.13 ENSMUST00000172378.2 |
||
| CDS-3UTR GCA 90 bp | GAGAGCTCTCATTGCTGGCATTCCTCACAGGATGGAGCCCGCAGGTACTATGAGCACTCGTCCTGGGGGTaGCTCTCCCAGGGCTGCACC | + |
|
Preference number: 4 (lower is better) Translates to: ESSHCWHSSQDGARRYYEHSSWG*LSQGCT Trigger: GGTGCAGCCCTGGGAGAGGCACCCCCAGGACGAGTG...CTCATAGTACCTGCGGGCTCCATCCTGTGAGGAATGCCAGCAATGAGAGCTCTC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000063871.13 ENSMUST00000172378.2 |
||
| CDS-3UTR CCA 90 bp | TCACAGGATGGAGCCCGCAGGTACTATGAGGCTGGTCCATCTGGGCCCCTGTGGGGGCCAAGGACAGCTTaGGTTTGTGCCATTCCGTCC | + |
|
Preference number: 4 (lower is better) Translates to: SQDGARRYYEAGPSGPLWGPRTA*VCAIPS Trigger: GGACGGAATGGCACAAACCCAAGCTGTCCTTGGCCC...CCACAGGGGCCCAGATGGACCAGCCTCATAGTACCTGCGGGCTCCATCCTGTGA 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000063871.13 ENSMUST00000172378.2 |
||
| CDS-3UTR CCA 90 bp | TCACAGGATGGAGCCCGCAGGTACTATGAGGCTGGTCCATCTGGGCCCCTGTGGGCAGCACAGAGCTTGTaGCTGCCTCTCGGGTCACAT | + |
|
Preference number: 4 (lower is better) Translates to: SQDGARRYYEAGPSGPLWAAQSL*LPLGSH Trigger: ATGTGACCCGAGAGGCAGCCACAAGCTCTGTGCTGC...CCACAGGGGCCCAGATGGACCAGCCTCATAGTACCTGCGGGCTCCATCCTGTGA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000063871.13 ENSMUST00000172378.2 |
||
| 3UTR CAA 72 bp | CAGCCCTGTTCACAGGGTGCTGGCCGAGAGCTCTCATaGCTGGCATTCCTCACAGGATGGAGCCCGCAGGTA | + |
|
Preference number: 4 (lower is better) Translates to: QPCSQGAGRELS*LAFLTGWSPQV Trigger: TACCTGCGGGCTCCATCCTGTGAGGAATGCCAGCAATGAGAGCTCTCGGCCAGCACCCTGTGAACAGGGCTG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000063871.13 ENSMUST00000172378.2 |
||
| CDS-3UTR TCA 90 bp | CACAGGATGGAGCCCGCAGGTACTATGAGGCTGGTCCATCTGGGCCCCTGTGGGTTGCAAAGGCTGAGATaGCCGGCCATGTGTTCAGCA | + |
|
Preference number: 4 (lower is better) Translates to: HRMEPAGTMRLVHLGPCGLQRLR*PAMCSA Trigger: TGCTGAACACATGGCCGGTCATCTCAGCCTTTGCAA...CCCACAGGGGCCCAGATGGACCAGCCTCATAGTACCTGCGGGCTCCATCCTGTG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000063871.13 ENSMUST00000172378.2 |
||
| 3UTR CAA 72 bp | CTGCTGGGATGTAATGCTGACCTGCACGAAGCCATCTaGGGCCATGAGGCGGCATGCCAGAGAGGCATCCCA | + |
|
Preference number: 4 (lower is better) Translates to: LLGCNADLHEAI*GHEAACQRGIP Trigger: TGGGATGCCTCTCTGGCATGCCGCCTCATGGCCCAAGATGGCTTCGTGCAGGTCAGCATTACATCCCAGCAG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000063871.13 |
||
| CDS-3UTR CCA 90 bp | CTCATTGCTGGCATTCCTCACAGGATGGAGCCCGCAGGTACTATGAGGCTGGTCTGCAGTAGGTCGGCCTaGCTCACAGACCACCAGGCA | + |
|
Preference number: 4 (lower is better) Translates to: LIAGIPHRMEPAGTMRLVCSRSA*LTDHQA Trigger: TGCCTGGTGGTCTGTGAGCCAGGCCGACCTACTGCA...GACCAGCCTCATAGTACCTGCGGGCTCCATCCTGTGAGGAATGCCAGCAATGAG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000063871.13 ENSMUST00000172378.2 |
||
| CDS-3UTR CCA 90 bp | CACAGGATGGAGCCCGCAGGTACTATGAGGCTGGTCCATCTGGGCCCCTGTGGGAGCATCAGACTCACCTaGACAGTTTGGCGGTTGTAC | + |
|
Preference number: 4 (lower is better) Translates to: HRMEPAGTMRLVHLGPCGSIRLT*TVWRLY Trigger: GTACAACCGCCAAACTGTCCAGGTGAGTCTGATGCT...CCCACAGGGGCCCAGATGGACCAGCCTCATAGTACCTGCGGGCTCCATCCTGTG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000063871.13 ENSMUST00000172378.2 |
||
| CDS-3UTR CCA 90 bp | TGTTCACAGGGTGCTGGCCGAGAGCTCTCATTGCTGGCATTCCTCACAGGATGGGCAGCACAGAGCTTGTaGCTGCCTCTCGGGTCACAT | + |
|
Preference number: 4 (lower is better) Translates to: CSQGAGRELSLLAFLTGWAAQSL*LPLGSH Trigger: ATGTGACCCGAGAGGCAGCCACAAGCTCTGTGCTGC...CCATCCTGTGAGGAATGCCAGCAATGAGAGCTCTCGGCCAGCACCCTGTGAACA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000063871.13 ENSMUST00000172378.2 |
||
| CDS-3UTR GCA 90 bp | TCTCATTGCTGGCATTCCTCACAGGATGGAGCCCGCAGGTACTATGAGGCTGGTCACAGAGCTTGTGGCTaGCTCTCGGGTCACATCAGG | + |
|
Preference number: 4 (lower is better) Translates to: SHCWHSSQDGARRYYEAGHRACG*LSGHIR Trigger: CCTGATGTGACCCGAGAGGCAGCCACAAGCTCTGTG...ACCAGCCTCATAGTACCTGCGGGCTCCATCCTGTGAGGAATGCCAGCAATGAGA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000063871.13 ENSMUST00000172378.2 |
||
| CDS-3UTR CCA 90 bp | ACACACACCCAAGCCTCTGGTCAGGCAATGAGGGCCAGAGTCCATTGGGACCTGAGTAGATGGCACCACTaGTACCGTTGCCGGTTTCTC | + |
|
Preference number: 4 (lower is better) Translates to: THTQASGQAMRARVHWDLSRWHH*YRCRFL Trigger: GAGAAACCGGCAACGGTACCAGTGGTGCCATCTACT...CAGGTCCCAATGGACTCTGGCCCTCATTGCCTGACCAGAGGCTTGGGTGTGTGT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000063871.13 ENSMUST00000172378.2 |
||
| CDS-3UTR TCA 90 bp | GTTACTGATGACTCATTCGTGACCTTTGACTCTGCCTCCAGGTCTGTATACCTGGGCTCTGACCCTTCTTaGGCCCACCCAGCCTCCAGG | + |
|
Preference number: 4 (lower is better) Translates to: VTDDSFVTFDSASRSVYLGSDPS*AHPASR Trigger: CCTGGAGGCTGGGTGGGCTCAAGAAGGGTCAGAGCC...CAGGTATACAGACCTGGAGGCAGAGTCAAAGGTCACGAATGAGTCATCAGTAAC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000063871.13 ENSMUST00000172378.2 |
||
| CDS-3UTR GCA 90 bp | CTTGGGTGTTTAACTATGATCTCATGCAAGGAGGTGGGCCGTAGGCAGCCTGGACACAGAGCTTGTGGCTaGCTCTCGGGTCACATCAGG | + |
|
Preference number: 4 (lower is better) Translates to: LGCLTMISCKEVGRRQPGHRACG*LSGHIR Trigger: CCTGATGTGACCCGAGAGGCAGCCACAAGCTCTGTG...TCCAGGCTGCCTACGGCCCACCTCCTTGCATGAGATCATAGTTAAACACCCAAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000063871.13 ENSMUST00000172378.2 |
||
| 3UTR CAA 72 bp | CTACGGATGCTCTGTGGCCTTCCCCACACTGCTTTTTaGTGGTTGAGCTGTCAGCCCTGTTCACAGGGTGCT | + |
|
Preference number: 4 (lower is better) Translates to: LRMLCGLPHTAF*WLSCQPCSQGA Trigger: AGCACCCTGTGAACAGGGCTGACAGCTCAACCACAAAAAAGCAGTGTGGGGAAGGCCACAGAGCATCCGTAG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000063871.13 ENSMUST00000172378.2 |
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| CDS-3UTR TCA 90 bp | GATCCAGCTTACACTCTCAGCATCCATAAGGTGGCTCACTGCCACTGCAGTTCACCTGCTGGTTCATGGTaGTGGCTTCGGACTGCAGCA | + |
|
Preference number: 4 (lower is better) Translates to: DPAYTLSIHKVAHCHCSSPAGSW*WLRTAA Trigger: TGCTGCAGTCCGAAGCCATCACCATGAACCAGCAGG...TGAACTGCAGTGGCAGTGAGCCACCTTATGGATGCTGAGAGTGTAAGCTGGATC 54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000063871.13 |
||
| CDS-3UTR TCA 90 bp | CCTGTGGGAGCCTGTCAAGCTTACCTGCGCCACCTGTCACCAAATAGCGCTGAGGAAGATGAGGAAGCCTaGGAAGCTCGAATACTTCCA | + |
|
Preference number: 4 (lower is better) Translates to: PVGACQAYLRHLSPNSAEEDEEA*EARILP Trigger: TGGAAGTATTCGAGCTTCTCAGGCTTCCTCATCTTC...CTCAGCGCTATTTGGTGACAGGTGGCGCAGGTAAGCTTGACAGGCTCCCACAGG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000063871.13 ENSMUST00000172378.2 |
||
| CDS-3UTR CCA 90 bp | TCTCATTGCTGGCATTCCTCACAGGATGGAGCCCGCAGGTACTATGAGGCTGGTCTCACCTGGACAGTTTaGCGGTTGTACACCTTGACC | + |
|
Preference number: 4 (lower is better) Translates to: SHCWHSSQDGARRYYEAGLTWTV*RLYTLT Trigger: GGTCAAGGTGTACAACCGCCAAACTGTCCAGGTGAG...ACCAGCCTCATAGTACCTGCGGGCTCCATCCTGTGAGGAATGCCAGCAATGAGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000063871.13 ENSMUST00000172378.2 |
||
| CDS-3UTR TCA 90 bp | GCAGACTACAGGGAAATTAGCTGGGAGACAGCTGGAGGAACTACATGTCGATCACCTGCTGGTTCATGGTaGTGGCTTCGGACTGCAGCA | + |
|
Preference number: 4 (lower is better) Translates to: ADYREISWETAGGTTCRSPAGSW*WLRTAA Trigger: TGCTGCAGTCCGAAGCCATCACCATGAACCAGCAGG...TGATCGACATGTAGTTCCTCCAGCTGTCTCCCAGCTAATTTCCCTGTAGTCTGC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000063871.13 ENSMUST00000172378.2 |
||
| CDS-3UTR TCA 90 bp | GCAGACTACAGGGAAATTAGCTGGGAGACAGCTGGAGGAACTACATGTCGATCAGGCGGTTGTACACCTTaGCCACGTGGAATCGGAAGC | + |
|
Preference number: 4 (lower is better) Translates to: ADYREISWETAGGTTCRSGGCTP*PRGIGS Trigger: GCTTCCGATTCCACGTGGTCAAGGTGTACAACCGCC...TGATCGACATGTAGTTCCTCCAGCTGTCTCCCAGCTAATTTCCCTGTAGTCTGC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000063871.13 ENSMUST00000172378.2 |
||
| CDS-3UTR GCA 90 bp | CTTGGGTGTTTAACTATGATCTCATGCAAGGAGGTGGGCCGTAGGCAGCCTGGAGTTGCCGGTTTCTCCTaGTGGTTCATGGTGATGGCT | + |
|
Preference number: 4 (lower is better) Translates to: LGCLTMISCKEVGRRQPGVAGFS*WFMVMA Trigger: AGCCATCACCATGAACCAGCAGGAGAAACCGGCAAC...TCCAGGCTGCCTACGGCCCACCTCCTTGCATGAGATCATAGTTAAACACCCAAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000063871.13 ENSMUST00000172378.2 |
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| CDS-3UTR CCA 90 bp | GACAGAGTTTATGTAGCCCAGGCTAGCCTTCAACTCCAGATCTTCCTGCTTCTGGGGCCAAGGACAGCTTaGGTTTGTGCCATTCCGTCC | + |
|
Preference number: 4 (lower is better) Translates to: DRVYVAQASLQLQIFLLLGPRTA*VCAIPS Trigger: GGACGGAATGGCACAAACCCAAGCTGTCCTTGGCCC...CAGAAGCAGGAAGATCTGGAGTTGAAGGCTAGCCTGGGCTACATAAACTCTGTC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000063871.13 |
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| CDS-3UTR CCA 90 bp | AATGTTTACATGTTCAGGGTAGGCACATGGCCCCATCCTGTCTCTCCAGCTACGCCTGGTCGAAGTAGATaGCACCACTGGTACCGTTGC | + |
|
Preference number: 4 (lower is better) Translates to: NVYMFRVGTWPHPVSPATPGRSR*HHWYRC Trigger: GCAACGGTACCAGTGGTGCCATCTACTTCGACCAGG...CGTAGCTGGAGAGACAGGATGGGGCCATGTGCCTACCCTGAACATGTAAACATT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000063871.13 ENSMUST00000172378.2 |
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| CDS-3UTR GCA 90 bp | AGGAGGAGTGGAGTCTGTGAAGAAGTGCAAGCTTCTAGCCTTGGGTGTTTAACTGTGATGGCTTCGGACTaGAGCAAACGCCACTCGTCC | + |
|
Preference number: 4 (lower is better) Translates to: RRSGVCEEVQASSLGCLTVMASD*SKRHSS Trigger: GGACGAGTGGCGTTTGCTGCAGTCCGAAGCCATCAC...AGTTAAACACCCAAGGCTAGAAGCTTGCACTTCTTCACAGACTCCACTCCTCCT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000172378.2 |
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| CDS-3UTR CCA 90 bp | CAGTGGTTAGAACACTTGCTGTGCACACCTGTTGGCCTGAGTTCATATTCCAGCCCTGGTCGAAGTAGATaGCACCACTGGTACCGTTGC | + |
|
Preference number: 4 (lower is better) Translates to: QWLEHLLCTPVGLSSYSSPGRSR*HHWYRC Trigger: GCAACGGTACCAGTGGTGCCATCTACTTCGACCAGG...GCTGGAATATGAACTCAGGCCAACAGGTGTGCACAGCAAGTGTTCTAACCACTG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000063871.13 |
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| CDS-3UTR CCA 90 bp | GGAGTCTGTGAAGAAGTGCAAGCTTCTAGCCTTGGGTGTTTAACTATGATCTCATGCAGTAGGTCGGCCTaGCTCACAGACCACCAGGCA | + |
|
Preference number: 4 (lower is better) Translates to: GVCEEVQASSLGCLTMISCSRSA*LTDHQA Trigger: TGCCTGGTGGTCTGTGAGCCAGGCCGACCTACTGCA...TGAGATCATAGTTAAACACCCAAGGCTAGAAGCTTGCACTTCTTCACAGACTCC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000172378.2 |
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| CDS-3UTR TCA 90 bp | CAGGTCTGTATACCTGCTCTAGTTTCCCCTATTAGCCAGAGCAAACACACACACTTGCAAAGGCTGAGATaGCCGGCCATGTGTTCAGCA | + |
|
Preference number: 4 (lower is better) Translates to: QVCIPALVSPISQSKHTHLQRLR*PAMCSA Trigger: TGCTGAACACATGGCCGGTCATCTCAGCCTTTGCAA...GTGTGTGTGTTTGCTCTGGCTAATAGGGGAAACTAGAGCAGGTATACAGACCTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000063871.13 ENSMUST00000172378.2 |
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| CDS-3UTR GCA 90 bp | TTCCAGCCAGCCATAGTCCATGCATTTGTAATCCTGTACTTTAAGGAGAAGGCAGTGATGGCTTCGGACTaGAGCAAACGCCACTCGTCC | + |
|
Preference number: 4 (lower is better) Translates to: FQPAIVHAFVILYFKEKAVMASD*SKRHSS Trigger: GGACGAGTGGCGTTTGCTGCAGTCCGAAGCCATCAC...TGCCTTCTCCTTAAAGTACAGGATTACAAATGCATGGACTATGGCTGGCTGGAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000063871.13 |
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| CDS-3UTR CCA 90 bp | AGGAGGAGTGGAGTCTGTGAAGAAGTGCAAGCTTCTAGCCTTGGGTGTTTAACTCTCACCTGGACAGTTTaGCGGTTGTACACCTTGACC | + |
|
Preference number: 4 (lower is better) Translates to: RRSGVCEEVQASSLGCLTLTWTV*RLYTLT Trigger: GGTCAAGGTGTACAACCGCCAAACTGTCCAGGTGAG...AGTTAAACACCCAAGGCTAGAAGCTTGCACTTCTTCACAGACTCCACTCCTCCT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000172378.2 |
||
| CDS-3UTR CCA 90 bp | GTTACTGATGACTCATTCGTGACCTTTGACTCTGCCTCCAGGTCTGTATACCTGAGCATCAGACTCACCTaGACAGTTTGGCGGTTGTAC | + |
|
Preference number: 4 (lower is better) Translates to: VTDDSFVTFDSASRSVYLSIRLT*TVWRLY Trigger: GTACAACCGCCAAACTGTCCAGGTGAGTCTGATGCT...CAGGTATACAGACCTGGAGGCAGAGTCAAAGGTCACGAATGAGTCATCAGTAAC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000063871.13 ENSMUST00000172378.2 |
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| 3UTR CAA 72 bp | CTCTCTGTCTTTCTTTTGGACAGGTTTTACTATGGCTaGCCTGAAACTCACAGAGATCCACCTGCCTCTGTC | + |
|
Preference number: 4 (lower is better) Translates to: LSVFLLDRFYYG*PETHRDPPASV Trigger: GACAGAGGCAGGTGGATCTCTGTGAGTTTCAGGCAAGCCATAGTAAAACCTGTCCAAAAGAAAGACAGAGAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000063871.13 |
||
| 3UTR CAA 72 bp | CTCCCGAGGGCTGGGATTAAAGGTATGGGACATCCATaGTCCAATTTTAAACCTCCACTCTCACTATCATAC | + |
|
Preference number: 4 (lower is better) Translates to: LPRAGIKGMGHP*SNFKPPLSLSY Trigger: GTATGATAGTGAGAGTGGAGGTTTAAAATTGGACAATGGATGTCCCATACCTTTAATCCCAGCCCTCGGGAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000063871.13 |
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| CDS-3UTR TCA 90 bp | TTTGAATTTATTTCTCTTCAGCATGCTGTAGTCCTGCAGTCCCTGTTTCACACCGAAGATGAGGAAGCCTaGGAAGCTCGAATACTTCCA | + |
|
Preference number: 4 (lower is better) Translates to: FEFISLQHAVVLQSLFHTEDEEA*EARILP Trigger: TGGAAGTATTCGAGCTTCTCAGGCTTCCTCATCTTC...GGTGTGAAACAGGGACTGCAGGACTACAGCATGCTGAAGAGAAATAAATTCAAA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000063871.13 |
||
| 3UTR CAA 72 bp | TTGATCTTCTTTGTCTTGAGTATCTCAGTGGGTGAATaGTGCCAAGTGTTTTCTCAAAACATCATCTTGAGA | + |
|
Preference number: 4 (lower is better) Translates to: LIFFVLSISVGE*CQVFSQNIILR Trigger: TCTCAAGATGATGTTTTGAGAAAACACTTGGCACAATTCACCCACTGAGATACTCAAGACAAAGAAGATCAA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000063871.13 |
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| CDS GCA 90 bp | ACCGTTGCCGGTTTCTCCTGCTGGTTCATGGTGATGGCTTCGGACTaGAGCAAACGCCACTCGTCCTGGGGGTGCCTCTCCCAGGGCTGC | + |
|
Preference number: 5 (lower is better) Translates to: TVAGFSCWFMVMASD*SKRHSSWGCLSQGC Trigger: GCAGCCCTGGGAGAGGCACCCCCAGGACGAGTGGCGTTTGCTGCAGTCCGAAGCCATCACCATGAACCAGCAGGAGAAACCGGCAACGGT 63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000063871.13 ENSMUST00000172378.2 |
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| CDS CCA 90 bp | GGGACACACGGTCCCCCGGGTCCAGGGGAAGCAGCACAGAGCTTGTaGCTGCCTCTCGGGTCACATCAGGGTCATTTGCAAAGGCTGAGA | + |
|
Preference number: 5 (lower is better) Translates to: GTHGPPGPGEAAQSL*LPLGSHQGHLQRLR Trigger: TCTCAGCCTTTGCAAATGACCCTGATGTGACCCGAGAGGCAGCCACAAGCTCTGTGCTGCTTCCCCTGGACCCGGGGGACCGTGTGTCCC 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000063871.13 ENSMUST00000172378.2 |
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| CDS-3UTR CAA 90 bp | TCACAGGATGGAGCCCGCAGGTACTATGAGGCTGGTCCATCTGGGCCCCTGTGGGAAGCAGCACAGAGCTaGTGGCTGCCTCTCGGGTCA | + |
|
Preference number: 5 (lower is better) Translates to: SQDGARRYYEAGPSGPLWEAAQS*WLPLGS Trigger: TGACCCGAGAGGCAGCCACAAGCTCTGTGCTGCTTC...CCACAGGGGCCCAGATGGACCAGCCTCATAGTACCTGCGGGCTCCATCCTGTGA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000063871.13 ENSMUST00000172378.2 |
||
| CDS TCA 90 bp | ATGGCACCACTGGTACCGTTGCCGGTTTCTCCTGCTGGTTCATGGTaGTGGCTTCGGACTGCAGCAAACGCCACTCGTCCTGGGGGTGCC | + |
|
Preference number: 5 (lower is better) Translates to: MAPLVPLPVSPAGSW*WLRTAANATRPGGA Trigger: GGCACCCCCAGGACGAGTGGCGTTTGCTGCAGTCCGAAGCCATCACCATGAACCAGCAGGAGAAACCGGCAACGGTACCAGTGGTGCCAT 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000063871.13 ENSMUST00000172378.2 |
||
| CDS TCA 90 bp | GGGCCACGAAGCAGCCCGAGGTCCGATCAAAGCCCTCGCCCTCATTaGCCAGTACCTGGTCGAAGTAGATGGCACCACTGGTACCGTTGC | + |
|
Preference number: 5 (lower is better) Translates to: GPRSSPRSDQSPRPH*PVPGRSRWHHWYRC Trigger: GCAACGGTACCAGTGGTGCCATCTACTTCGACCAGGTACTGGTCAATGAGGGCGAGGGCTTTGATCGGACCTCGGGCTGCTTCGTGGCCC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000063871.13 ENSMUST00000172378.2 |
||
| CDS-3UTR CAA 90 bp | TCACAGGATGGAGCCCGCAGGTACTATGAGGCTGGTCCATCTGGGCCCCTGTGGTGGACAGTTTGGCGGTaGTACACCTTGACCACGTGG | + |
|
Preference number: 5 (lower is better) Translates to: SQDGARRYYEAGPSGPLWWTVWR*YTLTTW Trigger: CCACGTGGTCAAGGTGTACAACCGCCAAACTGTCCA...CCACAGGGGCCCAGATGGACCAGCCTCATAGTACCTGCGGGCTCCATCCTGTGA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000063871.13 ENSMUST00000172378.2 |
||
| CDS GCA 90 bp | CTGGTCGAAGTAGATGGCACCACTGGTACCGTTGCCGGTTTCTCCTaGTGGTTCATGGTGATGGCTTCGGACTGCAGCAAACGCCACTCG | + |
|
Preference number: 5 (lower is better) Translates to: LVEVDGTTGTVAGFS*WFMVMASDCSKRHS Trigger: CGAGTGGCGTTTGCTGCAGTCCGAAGCCATCACCATGAACCAGCAGGAGAAACCGGCAACGGTACCAGTGGTGCCATCTACTTCGACCAG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000063871.13 ENSMUST00000172378.2 |
||
| CDS CCA 90 bp | GTCGAAGTAGATGGCACCACTGGTACCGTTGCCGGTTTCTCCTGCTaGTTCATGGTGATGGCTTCGGACTGCAGCAAACGCCACTCGTCC | + |
|
Preference number: 5 (lower is better) Translates to: VEVDGTTGTVAGFSC*FMVMASDCSKRHSS Trigger: GGACGAGTGGCGTTTGCTGCAGTCCGAAGCCATCACCATGAACCAGCAGGAGAAACCGGCAACGGTACCAGTGGTGCCATCTACTTCGAC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000063871.13 ENSMUST00000172378.2 |
||
| CDS-3UTR CAA 90 bp | GCAATGAGGGCCAGAGTCCATTGGGACCTGGCACAGATGGACGGCAGGATTCCTACTCACCTGGACAGTTaGGCGGTTGTACACCTTGAC | + |
|
Preference number: 5 (lower is better) Translates to: AMRARVHWDLAQMDGRIPTHLDS*AVVHLD Trigger: GTCAAGGTGTACAACCGCCAAACTGTCCAGGTGAGT...AGGAATCCTGCCGTCCATCTGTGCCAGGTCCCAATGGACTCTGGCCCTCATTGC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000063871.13 ENSMUST00000172378.2 |
||
| CDS-3UTR CAA 90 bp | CCAGCTTACACTCTCAGCATCCATAAGGTGGCTCACTGCCACTGCAGTTCAGTCGAAGCAGCACAGAGCTaGTGGCTGCCTCTCGGGTCA | + |
|
Preference number: 5 (lower is better) Translates to: PAYTLSIHKVAHCHCSSVEAAQS*WLPLGS Trigger: TGACCCGAGAGGCAGCCACAAGCTCTGTGCTGCTTC...GACTGAACTGCAGTGGCAGTGAGCCACCTTATGGATGCTGAGAGTGTAAGCTGG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000063871.13 |
||
| CDS TCA 90 bp | TGTTCAGCATCAGACTCACCTGGACAGTTTGGCGGTTGTACACCTTaGCCACGTGGAATCGGAAGCTGTAGACTCCACGGACAGGGGCCA | + |
|
Preference number: 5 (lower is better) Translates to: CSASDSPGQFGGCTP*PRGIGSCRLHGQGP Trigger: TGGCCCCTGTCCGTGGAGTCTACAGCTTCCGATTCCACGTGGTCAAGGTGTACAACCGCCAAACTGTCCAGGTGAGTCTGATGCTGAACA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000063871.13 ENSMUST00000172378.2 |
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| CDS TCA 90 bp | TGGCTGCCTCTCGGGTCACATCAGGGTCATTTGCAAAGGCTGAGATaGCCGGCCATGTGTTCAGCATCAGACTCACCTGGACAGTTTGGC | + |
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Preference number: 5 (lower is better) Translates to: WLPLGSHQGHLQRLR*PAMCSASDSPGQFG Trigger: GCCAAACTGTCCAGGTGAGTCTGATGCTGAACACATGGCCGGTCATCTCAGCCTTTGCAAATGACCCTGATGTGACCCGAGAGGCAGCCA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000063871.13 ENSMUST00000172378.2 |
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| CDS TCA 90 bp | GCTTGTGGCTGCCTCTCGGGTCACATCAGGGTCATTTGCAAAGGCTaGGATGACCGGCCATGTGTTCAGCATCAGACTCACCTGGACAGT | + |
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Preference number: 5 (lower is better) Translates to: ACGCLSGHIRVICKG*DDRPCVQHQTHLDS Trigger: ACTGTCCAGGTGAGTCTGATGCTGAACACATGGCCGGTCATCTCAGCCTTTGCAAATGACCCTGATGTGACCCGAGAGGCAGCCACAAGC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000063871.13 ENSMUST00000172378.2 |
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| CDS-3UTR CAA 90 bp | GACAGAGTTTATGTAGCCCAGGCTAGCCTTCAACTCCAGATCTTCCTGCTTCTGTGGACAGTTTGGCGGTaGTACACCTTGACCACGTGG | + |
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Preference number: 5 (lower is better) Translates to: DRVYVAQASLQLQIFLLLWTVWR*YTLTTW Trigger: CCACGTGGTCAAGGTGTACAACCGCCAAACTGTCCA...CAGAAGCAGGAAGATCTGGAGTTGAAGGCTAGCCTGGGCTACATAAACTCTGTC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000063871.13 |
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| CDS-3UTR CAA 90 bp | GTTACTGATGACTCATTCGTGACCTTTGACTCTGCCTCCAGGTCTGTATACCTGTGGCGGTTGTACACCTaGACCACGTGGAATCGGAAG | + |
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Preference number: 5 (lower is better) Translates to: VTDDSFVTFDSASRSVYLWRLYT*TTWNRK Trigger: CTTCCGATTCCACGTGGTCAAGGTGTACAACCGCCA...CAGGTATACAGACCTGGAGGCAGAGTCAAAGGTCACGAATGAGTCATCAGTAAC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000063871.13 ENSMUST00000172378.2 |
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| CDS-3UTR CAA 90 bp | CAGGCTAGCCTTCAACTCCAGATCTTCCTGCTTCTGTCTTTTAAGTGCCAAGTTTGGCGGTTGTACACCTaGACCACGTGGAATCGGAAG | + |
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Preference number: 5 (lower is better) Translates to: QASLQLQIFLLLSFKCQVWRLYT*TTWNRK Trigger: CTTCCGATTCCACGTGGTCAAGGTGTACAACCGCCA...AACTTGGCACTTAAAAGACAGAAGCAGGAAGATCTGGAGTTGAAGGCTAGCCTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000063871.13 |
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| CDS CAA 90 bp | GCAGGGACACACGGTCCCCCGGGTCCAGGGGAAGCAGCACAGAGCTaGTGGCTGCCTCTCGGGTCACATCAGGGTCATTTGCAAAGGCTG | + |
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Preference number: 6 (lower is better) Translates to: AGTHGPPGPGEAAQS*WLPLGSHQGHLQRL Trigger: CAGCCTTTGCAAATGACCCTGATGTGACCCGAGAGGCAGCCACAAGCTCTGTGCTGCTTCCCCTGGACCCGGGGGACCGTGTGTCCCTGC 63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000063871.13 ENSMUST00000172378.2 |
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| CDS GCA 72 bp | CCCCGGGTCCAGGGGAAGCAGCACAGAGCTTGTGGCTaGCTCTCGGGTCACATCAGGGTCATTTGCAAAGGC | + |
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Preference number: 6 (lower is better) Translates to: PRVQGKQHRACG*LSGHIRVICKG Trigger: GCCTTTGCAAATGACCCTGATGTGACCCGAGAGGCAGCCACAAGCTCTGTGCTGCTTCCCCTGGACCCGGGG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000063871.13 ENSMUST00000172378.2 |
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| CDS CCA 72 bp | GGTCCCCCGGGTCCAGGGGAAGCAGCACAGAGCTTGTaGCTGCCTCTCGGGTCACATCAGGGTCATTTGCAA | + |
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Preference number: 6 (lower is better) Translates to: GPPGPGEAAQSL*LPLGSHQGHLQ Trigger: TTGCAAATGACCCTGATGTGACCCGAGAGGCAGCCACAAGCTCTGTGCTGCTTCCCCTGGACCCGGGGGACC 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000063871.13 ENSMUST00000172378.2 |
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| CDS GCA 72 bp | GGTTTCTCCTGCTGGTTCATGGTGATGGCTTCGGACTaGAGCAAACGCCACTCGTCCTGGGGGTGCCTCTCC | + |
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Preference number: 6 (lower is better) Translates to: GFSCWFMVMASD*SKRHSSWGCLS Trigger: GGAGAGGCACCCCCAGGACGAGTGGCGTTTGCTGCAGTCCGAAGCCATCACCATGAACCAGCAGGAGAAACC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000063871.13 ENSMUST00000172378.2 |
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| CDS TCA 72 bp | AGCAGCCCGAGGTCCGATCAAAGCCCTCGCCCTCATTaGCCAGTACCTGGTCGAAGTAGATGGCACCACTGG | + |
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Preference number: 6 (lower is better) Translates to: SSPRSDQSPRPH*PVPGRSRWHHW Trigger: CCAGTGGTGCCATCTACTTCGACCAGGTACTGGTCAATGAGGGCGAGGGCTTTGATCGGACCTCGGGCTGCT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000063871.13 ENSMUST00000172378.2 |
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| CDS CCA 72 bp | GATGGCACCACTGGTACCGTTGCCGGTTTCTCCTGCTaGTTCATGGTGATGGCTTCGGACTGCAGCAAACGC | + |
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Preference number: 6 (lower is better) Translates to: DGTTGTVAGFSC*FMVMASDCSKR Trigger: GCGTTTGCTGCAGTCCGAAGCCATCACCATGAACCAGCAGGAGAAACCGGCAACGGTACCAGTGGTGCCATC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000063871.13 ENSMUST00000172378.2 |
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| CDS GCA 72 bp | GTAGATGGCACCACTGGTACCGTTGCCGGTTTCTCCTaGTGGTTCATGGTGATGGCTTCGGACTGCAGCAAA | + |
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Preference number: 6 (lower is better) Translates to: VDGTTGTVAGFS*WFMVMASDCSK Trigger: TTTGCTGCAGTCCGAAGCCATCACCATGAACCAGCAGGAGAAACCGGCAACGGTACCAGTGGTGCCATCTAC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000063871.13 ENSMUST00000172378.2 |
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| CDS GCA 72 bp | GTACCTGGTCGAAGTAGATGGCACCACTGGTACCGTTaGCGGTTTCTCCTGCTGGTTCATGGTGATGGCTTC | + |
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Preference number: 6 (lower is better) Translates to: VPGRSRWHHWYR*RFLLLVHGDGF Trigger: GAAGCCATCACCATGAACCAGCAGGAGAAACCGGCAACGGTACCAGTGGTGCCATCTACTTCGACCAGGTAC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000063871.13 ENSMUST00000172378.2 |
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| CDS TCA 72 bp | TCAGACTCACCTGGACAGTTTGGCGGTTGTACACCTTaGCCACGTGGAATCGGAAGCTGTAGACTCCACGGA | + |
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Preference number: 6 (lower is better) Translates to: SDSPGQFGGCTP*PRGIGSCRLHG Trigger: TCCGTGGAGTCTACAGCTTCCGATTCCACGTGGTCAAGGTGTACAACCGCCAAACTGTCCAGGTGAGTCTGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000063871.13 ENSMUST00000172378.2 |
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| CDS TCA 72 bp | TGCCTCTCGGGTCACATCAGGGTCATTTGCAAAGGCTaGGATGACCGGCCATGTGTTCAGCATCAGACTCAC | + |
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Preference number: 6 (lower is better) Translates to: CLSGHIRVICKG*DDRPCVQHQTH Trigger: GTGAGTCTGATGCTGAACACATGGCCGGTCATCTCAGCCTTTGCAAATGACCCTGATGTGACCCGAGAGGCA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000063871.13 ENSMUST00000172378.2 |
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