Pregenerated sensors for CBLN2 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000024647Ensembl transcript IDs: ENSMUST00000068423.10, ENSMUST00000122079.8, ENSMUST00000122464.8, ENSMUST00000169470.2
Found 112 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | ACCCTCTCCTTGACAGATCAAAGGAAGATCTCGAGGAAGAGGCACTaGTCCTGTTTCTTTGAAGCATCTTGTAATTGTGTGGCCACTCAG | + |
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Preference number: 1 (lower is better) Translates to: TLSLTDQRKISRKRH*SCFFEASCNCVATQ Trigger: CTGAGTGGCCACACAATTACAAGATGCTTCAAAGAAACAGGACCAGTGCCTCTTCCTCGAGATCTTCCTTTGATCTGTCAAGGAGAGGGT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000068423.10 ENSMUST00000122079.8 ENSMUST00000169470.2 |
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| 3UTR CCA 90 bp | GGAAGAGGCACTGGTCCTGTTTCTTTGAAGCATCTTGTAATTGTGTaGCCACTCAGAGGCAGATCTAACTCACTACTGAGACATATCCAG | + |
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Preference number: 1 (lower is better) Translates to: GRGTGPVSLKHLVIV*PLRGRSNSLLRHIQ Trigger: CTGGATATGTCTCAGTAGTGAGTTAGATCTGCCTCTGAGTGGCCACACAATTACAAGATGCTTCAAAGAAACAGGACCAGTGCCTCTTCC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000068423.10 ENSMUST00000122079.8 ENSMUST00000169470.2 |
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| 3UTR TCA 90 bp | AATACTGGAGCTTTAGAAGAAAGTCATTCTTCTACAGCAATAATCTaGTGGAGGTGGGCCCAAGCCATCCTATCCAGACAAGTTCAAGGT | + |
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Preference number: 1 (lower is better) Translates to: NTGALEESHSSTAII*WRWAQAILSRQVQG Trigger: ACCTTGAACTTGTCTGGATAGGATGGCTTGGGCCCACCTCCATCAGATTATTGCTGTAGAAGAATGACTTTCTTCTAAAGCTCCAGTATT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000068423.10 ENSMUST00000122079.8 ENSMUST00000122464.8 ENSMUST00000169470.2 |
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| 3UTR GCA 90 bp | TTTGATTGCTTTGGGATTAGTGACGTTTCCTTGGCACACAAATACTaGACCAGGTCTCTCAGTTGCTACTTAATAGTGCTGTTGCACAAG | + |
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Preference number: 1 (lower is better) Translates to: FDCFGISDVSLAHKY*TRSLSCYLIVLLHK Trigger: CTTGTGCAACAGCACTATTAAGTAGCAACTGAGAGACCTGGTGCAGTATTTGTGTGCCAAGGAAACGTCACTAATCCCAAAGCAATCAAA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000068423.10 ENSMUST00000122079.8 ENSMUST00000169470.2 |
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| 3UTR TCA 90 bp | GTCAGCAGCATCTATGTCATCAGGACAAGATACACCGTACAAACATaGGAAGTTAAGCCAATGGTTCCAACAATAAAATCCGATATCGAC | + |
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Preference number: 1 (lower is better) Translates to: VSSIYVIRTRYTVQT*EVKPMVPTIKSDID Trigger: GTCGATATCGGATTTTATTGTTGGAACCATTGGCTTAACTTCTCATGTTTGTACGGTGTATCTTGTCCTGATGACATAGATGCTGCTGAC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000068423.10 ENSMUST00000122079.8 ENSMUST00000122464.8 ENSMUST00000169470.2 |
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| 3UTR CAA 90 bp | GGCCAGATGTTCATCCACAGAGCATCAGTCAACACAACCCTCTCCTaGACAGATCAAAGGAAGATCTCGAGGAAGAGGCACTGGTCCTGT | + |
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Preference number: 2 (lower is better) Translates to: GQMFIHRASVNTTLS*TDQRKISRKRHWSC Trigger: ACAGGACCAGTGCCTCTTCCTCGAGATCTTCCTTTGATCTGTCAAGGAGAGGGTTGTGTTGACTGATGCTCTGTGGATGAACATCTGGCC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000068423.10 ENSMUST00000122079.8 ENSMUST00000169470.2 |
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| 3UTR-3UTR TCA 90 bp | GCACTTTTCGACAGGTTACCAATGCCCAGCTCCCTCCCAAGACCCCCAAGACCCTACACCGTACAAACATaGGAAGTTAAGCCAATGGTT | + |
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Preference number: 2 (lower is better) Translates to: ALFDRLPMPSSLPRPPRPYTVQT*EVKPMV Trigger: AACCATTGGCTTAACTTCTCATGTTTGTACGGTGTA...GGGTCTTGGGGGTCTTGGGAGGGAGCTGGGCATTGGTAACCTGTCGAAAAGTGC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000068423.10 ENSMUST00000122079.8 ENSMUST00000122464.8 ENSMUST00000169470.2 |
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| 3UTR-3UTR TCA 90 bp | ACAACCCTCTCCTTGACAGATCAAAGGAAGATCTCGAGGAAGAGGCACTGGTCCAGTTTGAAGCTGCACTaGGAGAGAACTCCAGGGAAG | + |
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Preference number: 2 (lower is better) Translates to: TTLSLTDQRKISRKRHWSSLKLH*ERTPGK Trigger: CTTCCCTGGAGTTCTCTCTCAGTGCAGCTTCAAACT...GGACCAGTGCCTCTTCCTCGAGATCTTCCTTTGATCTGTCAAGGAGAGGGTTGT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000068423.10 ENSMUST00000122079.8 ENSMUST00000169470.2 |
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| 3UTR-3UTR GCA 90 bp | ACAACCCTCTCCTTGACAGATCAAAGGAAGATCTCGAGGAAGAGGCACTGGTCCATGAGCAATGAGCAATaGCAGGTTACTAAGGGATCC | + |
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Preference number: 2 (lower is better) Translates to: TTLSLTDQRKISRKRHWSMSNEQ*QVTKGS Trigger: GGATCCCTTAGTAACCTGGCATTGCTCATTGCTCAT...GGACCAGTGCCTCTTCCTCGAGATCTTCCTTTGATCTGTCAAGGAGAGGGTTGT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000068423.10 ENSMUST00000122079.8 ENSMUST00000169470.2 |
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| 3UTR-3UTR CCA 90 bp | CACCAGGTCTCTCAGTTGCTACTTAATAGTGCTGTTGCACAAGATGCCAAAAGACAGGGGGCAGATCCCTaGGTCCTGATCAAAACCTTC | + |
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Preference number: 2 (lower is better) Translates to: HQVSQLLLNSAVAQDAKRQGADP*VLIKTF Trigger: GAAGGTTTTGATCAGGACCCAGGGATCTGCCCCCTG...TCTTTTGGCATCTTGTGCAACAGCACTATTAAGTAGCAACTGAGAGACCTGGTG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000068423.10 ENSMUST00000122079.8 ENSMUST00000169470.2 |
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| 3UTR-3UTR CCA 90 bp | CAGGTCTCTCAGTTGCTACTTAATAGTGCTGTTGCACAAGATGCCAAAAGAAGCGACTGTCTGGTTAGGTaGTCCTCTGCTGGGCTCTTG | + |
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Preference number: 2 (lower is better) Translates to: QVSQLLLNSAVAQDAKRSDCLVR*SSAGLL Trigger: CAAGAGCCCAGCAGAGGACCACCTAACCAGACAGTC...GCTTCTTTTGGCATCTTGTGCAACAGCACTATTAAGTAGCAACTGAGAGACCTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000068423.10 ENSMUST00000122079.8 ENSMUST00000169470.2 |
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| 3UTR-3UTR TCA 90 bp | CTACTGAGACATATCCAGAGGAAAAGCAAAGAGAGGATTAGGCCGCGTCAGCTCAGTAGGTTTGAGGAGTaGAACCTGAGGAAGAAAAGG | + |
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Preference number: 2 (lower is better) Translates to: LLRHIQRKSKERIRPRQLSRFEE*NLRKKR Trigger: CCTTTTCTTCCTCAGGTTTCACTCCTCAAACCTACT...GAGCTGACGCGGCCTAATCCTCTCTTTGCTTTTCCTCTGGATATGTCTCAGTAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000068423.10 ENSMUST00000122079.8 ENSMUST00000169470.2 |
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| 3UTR-3UTR GCA 90 bp | GCTTTGGGATTAGTGACGTTTCCTTGGCACACAAATACTGCACCAGGTCTCTCACTCCAGGGAAGGTTATaGAGGTTATGCAGGATGTTC | + |
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Preference number: 2 (lower is better) Translates to: ALGLVTFPWHTNTAPGLSLQGRL*RLCRMF Trigger: GAACATCCTGCATAACCTGCATAACCTTCCCTGGAG...TGAGAGACCTGGTGCAGTATTTGTGTGCCAAGGAAACGTCACTAATCCCAAAGC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000068423.10 ENSMUST00000122079.8 ENSMUST00000169470.2 |
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| 3UTR-3UTR CCA 90 bp | TCACAGACGGTACAAAACAGAAACTGCAGTCCAATCGTGCAAAATTTGCTTCTCCAGGGGGCAGATCCCTaGGTCCTGATCAAAACCTTC | + |
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Preference number: 2 (lower is better) Translates to: SQTVQNRNCSPIVQNLLLQGADP*VLIKTF Trigger: GAAGGTTTTGATCAGGACCCAGGGATCTGCCCCCTG...GAGAAGCAAATTTTGCACGATTGGACTGCAGTTTCTGTTTTGTACCGTCTGTGA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 4 transcripts: ENSMUST00000068423.10 ENSMUST00000122079.8 ENSMUST00000122464.8 ENSMUST00000169470.2 |
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| 3UTR-3UTR CCA 90 bp | CACAGACGGTACAAAACAGAAACTGCAGTCCAATCGTGCAAAATTTGCTTCTCACAGGGGGCAGATCCCTaGGTCCTGATCAAAACCTTC | + |
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Preference number: 2 (lower is better) Translates to: HRRYKTETAVQSCKICFSQGADP*VLIKTF Trigger: GAAGGTTTTGATCAGGACCCAGGGATCTGCCCCCTG...TGAGAAGCAAATTTTGCACGATTGGACTGCAGTTTCTGTTTTGTACCGTCTGTG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 4 transcripts: ENSMUST00000068423.10 ENSMUST00000122079.8 ENSMUST00000122464.8 ENSMUST00000169470.2 |
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| 3UTR-3UTR TCA 90 bp | AAGGGATTCATGAGCAATGAGCAATGCCAGGTTACTAAGGGATCCCAGAGAATATCCGAGCCCCCAGCATaGAAACTAAGTAGGTTTGAG | + |
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Preference number: 2 (lower is better) Translates to: KGFMSNEQCQVTKGSQRISEPPA*KLSRFE Trigger: CTCAAACCTACTTAGTTTTCATGCTGGGGGCTCGGA...TATTCTCTGGGATCCCTTAGTAACCTGGCATTGCTCATTGCTCATGAATCCCTT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000068423.10 ENSMUST00000122079.8 ENSMUST00000169470.2 |
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| 3UTR-3UTR CCA 90 bp | CAGGTCTCTCAGTTGCTACTTAATAGTGCTGTTGCACAAGATGCCAAAAGAAGCGATTTCCAGTCCAGGTaGCTTCTGGCCAGATGTTCA | + |
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Preference number: 2 (lower is better) Translates to: QVSQLLLNSAVAQDAKRSDFQSR*LLARCS Trigger: TGAACATCTGGCCAGAAGCCACCTGGACTGGAAATC...GCTTCTTTTGGCATCTTGTGCAACAGCACTATTAAGTAGCAACTGAGAGACCTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000068423.10 ENSMUST00000122079.8 ENSMUST00000169470.2 |
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| 3UTR-3UTR GCA 90 bp | ACAACCCTCTCCTTGACAGATCAAAGGAAGATCTCGAGGAAGAGGCACTGGTCCGTACAAAACAGAAACTaGAGTCCAATCGTGCAAAAT | + |
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Preference number: 2 (lower is better) Translates to: TTLSLTDQRKISRKRHWSVQNRN*SPIVQN Trigger: ATTTTGCACGATTGGACTGCAGTTTCTGTTTTGTAC...GGACCAGTGCCTCTTCCTCGAGATCTTCCTTTGATCTGTCAAGGAGAGGGTTGT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000068423.10 ENSMUST00000122079.8 ENSMUST00000169470.2 |
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| 3UTR-3UTR CCA 90 bp | GGTTCCAACAATAAAATCCGATATCGACTTTACAATCACGGGTACAAATTGCTCCAGGGGGCAGATCCCTaGGTCCTGATCAAAACCTTC | + |
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Preference number: 2 (lower is better) Translates to: GSNNKIRYRLYNHGYKLLQGADP*VLIKTF Trigger: GAAGGTTTTGATCAGGACCCAGGGATCTGCCCCCTG...GAGCAATTTGTACCCGTGATTGTAAAGTCGATATCGGATTTTATTGTTGGAACC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 4 transcripts: ENSMUST00000068423.10 ENSMUST00000122079.8 ENSMUST00000122464.8 ENSMUST00000169470.2 |
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| 3UTR-3UTR TCA 90 bp | CAGGTCTCTCAGTTGCTACTTAATAGTGCTGTTGCACAAGATGCCAAAAGAAGCAGTAGGTTTGAGGAGTaGAACCTGAGGAAGAAAAGG | + |
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Preference number: 2 (lower is better) Translates to: QVSQLLLNSAVAQDAKRSSRFEE*NLRKKR Trigger: CCTTTTCTTCCTCAGGTTTCACTCCTCAAACCTACT...GCTTCTTTTGGCATCTTGTGCAACAGCACTATTAAGTAGCAACTGAGAGACCTG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000068423.10 ENSMUST00000122079.8 ENSMUST00000169470.2 |
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| 3UTR-3UTR TCA 90 bp | CACCAGGTCTCTCAGTTGCTACTTAATAGTGCTGTTGCACAAGATGCCAAAAGAACACAACCCTCTCCTTaGCAGATCAAAGGAAGATCT | + |
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Preference number: 2 (lower is better) Translates to: HQVSQLLLNSAVAQDAKRTQPSP*QIKGRS Trigger: AGATCTTCCTTTGATCTGTCAAGGAGAGGGTTGTGT...TCTTTTGGCATCTTGTGCAACAGCACTATTAAGTAGCAACTGAGAGACCTGGTG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000068423.10 ENSMUST00000122079.8 ENSMUST00000169470.2 |
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| 3UTR-3UTR GCA 90 bp | AAGGGATTCATGAGCAATGAGCAATGCCAGGTTACTAAGGGATCCCAGAGAATAACTGCAGTCCAATCGTaGAAAATTTGCTTCTCAGGA | + |
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Preference number: 2 (lower is better) Translates to: KGFMSNEQCQVTKGSQRITAVQS*KICFSG Trigger: TCCTGAGAAGCAAATTTTGCACGATTGGACTGCAGT...TATTCTCTGGGATCCCTTAGTAACCTGGCATTGCTCATTGCTCATGAATCCCTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000068423.10 ENSMUST00000122079.8 ENSMUST00000169470.2 |
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| 3UTR-3UTR GCA 90 bp | TTCATCCACAGAGCATCAGTCAACACAACCCTCTCCTTGACAGATCAAAGGAAGAGGTTATGCAGGTTATaGAGGATGTTCTATTTGCTG | + |
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Preference number: 2 (lower is better) Translates to: FIHRASVNTTLSLTDQRKRLCRL*RMFYLL Trigger: CAGCAAATAGAACATCCTGCATAACCTGCATAACCT...CTTCCTTTGATCTGTCAAGGAGAGGGTTGTGTTGACTGATGCTCTGTGGATGAA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000068423.10 ENSMUST00000122079.8 ENSMUST00000169470.2 |
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| 3UTR-3UTR GCA 90 bp | CACCAGGTCTCTCAGTTGCTACTTAATAGTGCTGTTGCACAAGATGCCAAAAGAAGGTTATGCAGGTTATaGAGGATGTTCTATTTGCTG | + |
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Preference number: 2 (lower is better) Translates to: HQVSQLLLNSAVAQDAKRRLCRL*RMFYLL Trigger: CAGCAAATAGAACATCCTGCATAACCTGCATAACCT...TCTTTTGGCATCTTGTGCAACAGCACTATTAAGTAGCAACTGAGAGACCTGGTG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000068423.10 ENSMUST00000122079.8 ENSMUST00000169470.2 |
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| 3UTR-3UTR TCA 90 bp | AGACGGTACAAAACAGAAACTGCAGTCCAATCGTGCAAAATTTGCTTCTCAGGATACACCGTACAAACATaGGAAGTTAAGCCAATGGTT | + |
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Preference number: 2 (lower is better) Translates to: RRYKTETAVQSCKICFSGYTVQT*EVKPMV Trigger: AACCATTGGCTTAACTTCTCATGTTTGTACGGTGTA...TCCTGAGAAGCAAATTTTGCACGATTGGACTGCAGTTTCTGTTTTGTACCGTCT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000068423.10 ENSMUST00000122079.8 ENSMUST00000122464.8 ENSMUST00000169470.2 |
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| 3UTR-3UTR TCA 90 bp | ACGGTACAAAACAGAAACTGCAGTCCAATCGTGCAAAATTTGCTTCTCAGGATATACACCGTACAAACATaGGAAGTTAAGCCAATGGTT | + |
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Preference number: 2 (lower is better) Translates to: TVQNRNCSPIVQNLLLRIYTVQT*EVKPMV Trigger: AACCATTGGCTTAACTTCTCATGTTTGTACGGTGTA...TATCCTGAGAAGCAAATTTTGCACGATTGGACTGCAGTTTCTGTTTTGTACCGT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000068423.10 ENSMUST00000122079.8 ENSMUST00000122464.8 ENSMUST00000169470.2 |
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| 3UTR CAA 90 bp | TTGTTACACAAAGGACAAATTAACATCCAGTTTGAGGTCACATCTTaGATTGCTTTGGGATTAGTGACGTTTCCTTGGCACACAAATACT | + |
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Preference number: 2 (lower is better) Translates to: LLHKGQINIQFEVTS*IALGLVTFPWHTNT Trigger: AGTATTTGTGTGCCAAGGAAACGTCACTAATCCCAAAGCAATCAAAGATGTGACCTCAAACTGGATGTTAATTTGTCCTTTGTGTAACAA 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000068423.10 ENSMUST00000122079.8 ENSMUST00000169470.2 |
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| 3UTR-3UTR GCA 90 bp | TGGTTACATTGTTACACAAAGGACAAATTAACATCCAGTTTGAGGTCACATCTTACCAGGTCTCTCAGTTaGTACTTAATAGTGCTGTTG | + |
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Preference number: 2 (lower is better) Translates to: WLHCYTKDKLTSSLRSHLTRSLS*YLIVLL Trigger: CAACAGCACTATTAAGTAGCAACTGAGAGACCTGGT...AAGATGTGACCTCAAACTGGATGTTAATTTGTCCTTTGTGTAACAATGTAACCA 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000068423.10 ENSMUST00000122079.8 ENSMUST00000169470.2 |
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| 3UTR TCA 72 bp | TTAGGTGGTCCTCTGCTGGGCTCTTGCTTTAAGCCCTaGCTGAAGCGTGCAATCCATCTGAGGGTCAGCAGC | + |
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Preference number: 3 (lower is better) Translates to: LGGPLLGSCFKP*LKRAIHLRVSS Trigger: GCTGCTGACCCTCAGATGGATTGCACGCTTCAGTCAGGGCTTAAAGCAAGAGCCCAGCAGAGGACCACCTAA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000068423.10 ENSMUST00000122079.8 ENSMUST00000122464.8 ENSMUST00000169470.2 |
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| 3UTR TCA 72 bp | AGTTCAAGGTGTTACAGGGGGCAGATCCCTGGGTCCTaGTCAAAACCTTCCCATCATCCTGGTGGCTCTGAG | + |
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Preference number: 3 (lower is better) Translates to: SSRCYRGQIPGS*SKPSHHPGGSE Trigger: CTCAGAGCCACCAGGATGATGGGAAGGTTTTGATCAGGACCCAGGGATCTGCCCCCTGTAACACCTTGAACT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000068423.10 ENSMUST00000122079.8 ENSMUST00000122464.8 ENSMUST00000169470.2 |
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| 3UTR TCA 72 bp | CACCCATGGGGTACAGCAGCCAGTACCTTTAACTGCTaGGATTTCCAGTCCAGGTGGCTTCTGGCCAGATGT | + |
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Preference number: 3 (lower is better) Translates to: HPWGTAASTFNC*DFQSRWLLARC Trigger: ACATCTGGCCAGAAGCCACCTGGACTGGAAATCTCAGCAGTTAAAGGTACTGGCTGCTGTACCCCATGGGTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000068423.10 ENSMUST00000122079.8 ENSMUST00000169470.2 |
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| 3UTR GCA 72 bp | CTTCTCAGGATAAAGCACTTTTCGACAGGTTACCAATaGCCAGCTCCCTCCCAAGACCCCCAAGACCCTAGG | + |
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Preference number: 3 (lower is better) Translates to: LLRIKHFSTGYQ*PAPSQDPQDPR Trigger: CCTAGGGTCTTGGGGGTCTTGGGAGGGAGCTGGGCATTGGTAACCTGTCGAAAAGTGCTTTATCCTGAGAAG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000068423.10 ENSMUST00000122079.8 ENSMUST00000122464.8 ENSMUST00000169470.2 |
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| 3UTR CCA 72 bp | CCAGACAAGTTCAAGGTGTTACAGGGGGCAGATCCCTaGGTCCTGATCAAAACCTTCCCATCATCCTGGTGG | + |
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Preference number: 3 (lower is better) Translates to: PDKFKVLQGADP*VLIKTFPSSWW Trigger: CCACCAGGATGATGGGAAGGTTTTGATCAGGACCCAGGGATCTGCCCCCTGTAACACCTTGAACTTGTCTGG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000068423.10 ENSMUST00000122079.8 ENSMUST00000122464.8 ENSMUST00000169470.2 |
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| 3UTR CCA 72 bp | GGCTACACACACACAGAACACAGGTCAAAGACTGTCTaGTTAGGTGGTCCTCTGCTGGGCTCTTGCTTTAAG | + |
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Preference number: 3 (lower is better) Translates to: GYTHTEHRSKTV*LGGPLLGSCFK Trigger: CTTAAAGCAAGAGCCCAGCAGAGGACCACCTAACCAGACAGTCTTTGACCTGTGTTCTGTGTGTGTGTAGCC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000068423.10 ENSMUST00000122079.8 ENSMUST00000122464.8 ENSMUST00000169470.2 |
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| 3UTR CCA 72 bp | CCTTTAACTGCTGAGATTTCCAGTCCAGGTGGCTTCTaGCCAGATGTTCATCCACAGAGCATCAGTCAACAC | + |
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Preference number: 3 (lower is better) Translates to: PLTAEISSPGGF*PDVHPQSISQH Trigger: GTGTTGACTGATGCTCTGTGGATGAACATCTGGCCAGAAGCCACCTGGACTGGAAATCTCAGCAGTTAAAGG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000068423.10 ENSMUST00000122079.8 ENSMUST00000169470.2 |
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| 3UTR TCA 72 bp | TCATCCACAGAGCATCAGTCAACACAACCCTCTCCTTaGCAGATCAAAGGAAGATCTCGAGGAAGAGGCACT | + |
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Preference number: 3 (lower is better) Translates to: SSTEHQSTQPSP*QIKGRSRGRGT Trigger: AGTGCCTCTTCCTCGAGATCTTCCTTTGATCTGTCAAGGAGAGGGTTGTGTTGACTGATGCTCTGTGGATGA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000068423.10 ENSMUST00000122079.8 ENSMUST00000169470.2 |
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| 3UTR-3UTR CAA 90 bp | GGGATTAGTGACGTTTCCTTGGCACACAAATACTGCACCAGGTCTCTCAGTTGCCCAATCGTGCAAAATTaGCTTCTCAGGATAAAGCAC | + |
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Preference number: 3 (lower is better) Translates to: GISDVSLAHKYCTRSLSCPIVQN*LLRIKH Trigger: GTGCTTTATCCTGAGAAGCAAATTTTGCACGATTGG...GCAACTGAGAGACCTGGTGCAGTATTTGTGTGCCAAGGAAACGTCACTAATCCC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000068423.10 ENSMUST00000122079.8 ENSMUST00000169470.2 |
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| 3UTR TCA 72 bp | TTGTGTGGCCACTCAGAGGCAGATCTAACTCACTACTaGGACATATCCAGAGGAAAAGCAAAGAGAGGATTA | + |
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Preference number: 3 (lower is better) Translates to: LCGHSEADLTHY*DISRGKAKRGL Trigger: TAATCCTCTCTTTGCTTTTCCTCTGGATATGTCTCAGTAGTGAGTTAGATCTGCCTCTGAGTGGCCACACAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000068423.10 ENSMUST00000122079.8 ENSMUST00000169470.2 |
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| 3UTR GCA 72 bp | TCCTTGGCACACAAATACTGCACCAGGTCTCTCAGTTaGTACTTAATAGTGCTGTTGCACAAGATGCCAAAA | + |
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Preference number: 3 (lower is better) Translates to: SLAHKYCTRSLS*YLIVLLHKMPK Trigger: TTTTGGCATCTTGTGCAACAGCACTATTAAGTAGCAACTGAGAGACCTGGTGCAGTATTTGTGTGCCAAGGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000068423.10 ENSMUST00000122079.8 ENSMUST00000169470.2 |
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| 3UTR CCA 72 bp | ACATCTTTGATTGCTTTGGGATTAGTGACGTTTCCTTaGCACACAAATACTGCACCAGGTCTCTCAGTTGCT | + |
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Preference number: 3 (lower is better) Translates to: TSLIALGLVTFP*HTNTAPGLSVA Trigger: AGCAACTGAGAGACCTGGTGCAGTATTTGTGTGCCAAGGAAACGTCACTAATCCCAAAGCAATCAAAGATGT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000068423.10 ENSMUST00000122079.8 ENSMUST00000169470.2 |
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| 3UTR-3UTR CAA 90 bp | AAGGGATTCATGAGCAATGAGCAATGCCAGGTTACTAAGGGATCCCAGAGAATACAGGTTCCCGAGGAATaGTCAATAGTCAAAGAAAAT | + |
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Preference number: 3 (lower is better) Translates to: KGFMSNEQCQVTKGSQRIQVPEE*SIVKEN Trigger: ATTTTCTTTGACTATTGACAATTCCTCGGGAACCTG...TATTCTCTGGGATCCCTTAGTAACCTGGCATTGCTCATTGCTCATGAATCCCTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000068423.10 ENSMUST00000122079.8 ENSMUST00000169470.2 |
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| 3UTR-3UTR CAA 90 bp | CAGGTCTCTCAGTTGCTACTTAATAGTGCTGTTGCACAAGATGCCAAAAGAAGCCAGGTTCCCGAGGAATaGTCAATAGTCAAAGAAAAT | + |
|
Preference number: 3 (lower is better) Translates to: QVSQLLLNSAVAQDAKRSQVPEE*SIVKEN Trigger: ATTTTCTTTGACTATTGACAATTCCTCGGGAACCTG...GCTTCTTTTGGCATCTTGTGCAACAGCACTATTAAGTAGCAACTGAGAGACCTG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000068423.10 ENSMUST00000122079.8 ENSMUST00000169470.2 |
||
| 3UTR-3UTR CAA 90 bp | CACCAGGTCTCTCAGTTGCTACTTAATAGTGCTGTTGCACAAGATGCCAAAAGAACTGGTCCTGTTTCTTaGAAGCATCTTGTAATTGTG | + |
|
Preference number: 3 (lower is better) Translates to: HQVSQLLLNSAVAQDAKRTGPVS*KHLVIV Trigger: CACAATTACAAGATGCTTCAAAGAAACAGGACCAGT...TCTTTTGGCATCTTGTGCAACAGCACTATTAAGTAGCAACTGAGAGACCTGGTG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000068423.10 ENSMUST00000122079.8 ENSMUST00000169470.2 |
||
| 3UTR-3UTR CAA 90 bp | ACAGACGGTACAAAACAGAAACTGCAGTCCAATCGTGCAAAATTTGCTTCTCAGCAGGTTCCCGAGGAATaGTCAATAGTCAAAGAAAAT | + |
|
Preference number: 3 (lower is better) Translates to: TDGTKQKLQSNRAKFASQQVPEE*SIVKEN Trigger: ATTTTCTTTGACTATTGACAATTCCTCGGGAACCTG...CTGAGAAGCAAATTTTGCACGATTGGACTGCAGTTTCTGTTTTGTACCGTCTGT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 4 transcripts: ENSMUST00000068423.10 ENSMUST00000122079.8 ENSMUST00000122464.8 ENSMUST00000169470.2 |
||
| 3UTR-3UTR CAA 90 bp | ACGGTACAAAACAGAAACTGCAGTCCAATCGTGCAAAATTTGCTTCTCAGGATACAGGTTCCCGAGGAATaGTCAATAGTCAAAGAAAAT | + |
|
Preference number: 3 (lower is better) Translates to: TVQNRNCSPIVQNLLLRIQVPEE*SIVKEN Trigger: ATTTTCTTTGACTATTGACAATTCCTCGGGAACCTG...TATCCTGAGAAGCAAATTTTGCACGATTGGACTGCAGTTTCTGTTTTGTACCGT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 4 transcripts: ENSMUST00000068423.10 ENSMUST00000122079.8 ENSMUST00000122464.8 ENSMUST00000169470.2 |
||
| CDS-3UTR TCA 90 bp | GGTTACCAATGCCCAGCTCCCTCCCAAGACCCCCAAGACCCTAGGGAAAAGCTATGCCCAGGGAAGAAGTaGCGGCGCCATCCCCCGATG | + |
|
Preference number: 4 (lower is better) Translates to: GYQCPAPSQDPQDPREKLCPGKK*RRHPPM Trigger: CATCGGGGGATGGCGCCGTCACTTCTTCCCTGGGCA...TAGCTTTTCCCTAGGGTCTTGGGGGTCTTGGGAGGGAGCTGGGCATTGGTAACC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 4 transcripts: ENSMUST00000068423.10 ENSMUST00000122079.8 ENSMUST00000122464.8 ENSMUST00000169470.2 |
||
| CDS-3UTR CCA 90 bp | AATGCCCAGCTCCCTCCCAAGACCCCCAAGACCCTAGGGAAAAGCTACGGAATGCGGAGAAGGCCACCTTaGCACTGCCTGAGCGCACAG | + |
|
Preference number: 4 (lower is better) Translates to: NAQLPPKTPKTLGKSYGMRRRPP*HCLSAQ Trigger: CTGTGCGCTCAGGCAGTGCCAAGGTGGCCTTCTCCG...CATTCCGTAGCTTTTCCCTAGGGTCTTGGGGGTCTTGGGAGGGAGCTGGGCATT 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000068423.10 ENSMUST00000122079.8 ENSMUST00000122464.8 ENSMUST00000169470.2 |
||
| CDS-3UTR TCA 90 bp | ACAACCCTCTCCTTGACAGATCAAAGGAAGATCTCGAGGAAGAGGCACTGGTCCTGCCCAGGGAAGAAGTaGCGGCGCCATCCCCCGATG | + |
|
Preference number: 4 (lower is better) Translates to: TTLSLTDQRKISRKRHWSCPGKK*RRHPPM Trigger: CATCGGGGGATGGCGCCGTCACTTCTTCCCTGGGCA...GGACCAGTGCCTCTTCCTCGAGATCTTCCTTTGATCTGTCAAGGAGAGGGTTGT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000068423.10 ENSMUST00000122079.8 ENSMUST00000169470.2 |
||
| CDS-3UTR CCA 90 bp | GGGATTAGTGACGTTTCCTTGGCACACAAATACTGCACCAGGTCTCTCAGTTGCCGGAGAAGGCCACCTTaGCACTGCCTGAGCGCACAG | + |
|
Preference number: 4 (lower is better) Translates to: GISDVSLAHKYCTRSLSCRRRPP*HCLSAQ Trigger: CTGTGCGCTCAGGCAGTGCCAAGGTGGCCTTCTCCG...GCAACTGAGAGACCTGGTGCAGTATTTGTGTGCCAAGGAAACGTCACTAATCCC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000068423.10 ENSMUST00000122079.8 ENSMUST00000169470.2 |
||
| CDS-3UTR CCA 90 bp | TTCATCCACAGAGCATCAGTCAACACAACCCTCTCCTTGACAGATCAAAGGAAGCGGAGAAGGCCACCTTaGCACTGCCTGAGCGCACAG | + |
|
Preference number: 4 (lower is better) Translates to: FIHRASVNTTLSLTDQRKRRRPP*HCLSAQ Trigger: CTGTGCGCTCAGGCAGTGCCAAGGTGGCCTTCTCCG...CTTCCTTTGATCTGTCAAGGAGAGGGTTGTGTTGACTGATGCTCTGTGGATGAA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000068423.10 ENSMUST00000122079.8 ENSMUST00000169470.2 |
||
| CDS-3UTR TCA 90 bp | TCACAGACGGTACAAAACAGAAACTGCAGTCCAATCGTGCAAAATTTGCTTCTCTGCCCAGGGAAGAAGTaGCGGCGCCATCCCCCGATG | + |
|
Preference number: 4 (lower is better) Translates to: SQTVQNRNCSPIVQNLLLCPGKK*RRHPPM Trigger: CATCGGGGGATGGCGCCGTCACTTCTTCCCTGGGCA...GAGAAGCAAATTTTGCACGATTGGACTGCAGTTTCTGTTTTGTACCGTCTGTGA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 4 transcripts: ENSMUST00000068423.10 ENSMUST00000122079.8 ENSMUST00000122464.8 ENSMUST00000169470.2 |
||
| CDS-3UTR GCA 90 bp | GCACTTTTCGACAGGTTACCAATGCCCAGCTCCCTCCCAAGACCCCCAAGACCCCAAGGTCAAAGTGGTTaGCAATGTTTACTAAGACCT | + |
|
Preference number: 4 (lower is better) Translates to: ALFDRLPMPSSLPRPPRPQGQSG*QCLLRP Trigger: AGGTCTTAGTAAACATTGGCAACCACTTTGACCTTG...GGGTCTTGGGGGTCTTGGGAGGGAGCTGGGCATTGGTAACCTGTCGAAAAGTGC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 4 transcripts: ENSMUST00000068423.10 ENSMUST00000122079.8 ENSMUST00000122464.8 ENSMUST00000169470.2 |
||
| CDS-3UTR CCA 90 bp | GGTTACCAATGCCCAGCTCCCTCCCAAGACCCCCAAGACCCTAGGGAAAAGCTAGAGGCAAGGTCAAAGTaGTTGCCAATGTTTACTAAG | + |
|
Preference number: 4 (lower is better) Translates to: GYQCPAPSQDPQDPREKLEARSK*LPMFTK Trigger: CTTAGTAAACATTGGCAACCACTTTGACCTTGCCTC...TAGCTTTTCCCTAGGGTCTTGGGGGTCTTGGGAGGGAGCTGGGCATTGGTAACC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000068423.10 ENSMUST00000122079.8 ENSMUST00000122464.8 ENSMUST00000169470.2 |
||
| CDS-3UTR GCA 90 bp | AATGCCCAGCTCCCTCCCAAGACCCCCAAGACCCTAGGGAAAAGCTACGGAATGCAAGGTCAAAGTGGTTaGCAATGTTTACTAAGACCT | + |
|
Preference number: 4 (lower is better) Translates to: NAQLPPKTPKTLGKSYGMQGQSG*QCLLRP Trigger: AGGTCTTAGTAAACATTGGCAACCACTTTGACCTTG...CATTCCGTAGCTTTTCCCTAGGGTCTTGGGGGTCTTGGGAGGGAGCTGGGCATT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000068423.10 ENSMUST00000122079.8 ENSMUST00000122464.8 ENSMUST00000169470.2 |
||
| CDS-3UTR CCA 90 bp | GTTAAGCCAATGGTTCCAACAATAAAATCCGATATCGACTTTACAATCACGGGTCGGAGAAGGCCACCTTaGCACTGCCTGAGCGCACAG | + |
|
Preference number: 4 (lower is better) Translates to: VKPMVPTIKSDIDFTITGRRRPP*HCLSAQ Trigger: CTGTGCGCTCAGGCAGTGCCAAGGTGGCCTTCTCCG...ACCCGTGATTGTAAAGTCGATATCGGATTTTATTGTTGGAACCATTGGCTTAAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000068423.10 ENSMUST00000122079.8 ENSMUST00000122464.8 ENSMUST00000169470.2 |
||
| CDS-3UTR TCA 90 bp | TGGTTACATTGTTACACAAAGGACAAATTAACATCCAGTTTGAGGTCACATCTTTGCCCAGGGAAGAAGTaGCGGCGCCATCCCCCGATG | + |
|
Preference number: 4 (lower is better) Translates to: WLHCYTKDKLTSSLRSHLCPGKK*RRHPPM Trigger: CATCGGGGGATGGCGCCGTCACTTCTTCCCTGGGCA...AAGATGTGACCTCAAACTGGATGTTAATTTGTCCTTTGTGTAACAATGTAACCA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000068423.10 ENSMUST00000122079.8 ENSMUST00000169470.2 |
||
| CDS-3UTR TCA 90 bp | CACAGGTCAAAGACTGTCTGGTTAGGTGGTCCTCTGCTGGGCTCTTGCTTTAAGCTCTCTAGTTTGAGATaGACTTTGTCTTCTCTTTCC | + |
|
Preference number: 4 (lower is better) Translates to: HRSKTVWLGGPLLGSCFKLSSLR*TLSSLS Trigger: GGAAAGAGAAGACAAAGTTCATCTCAAACTAGAGAG...CTTAAAGCAAGAGCCCAGCAGAGGACCACCTAACCAGACAGTCTTTGACCTGTG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000068423.10 ENSMUST00000122079.8 ENSMUST00000122464.8 ENSMUST00000169470.2 |
||
| CDS-3UTR TCA 90 bp | GCTGCACTGAGAGAGAACTCCAGGGAAGGTTATGCAGGTTATGCAGGATGTTCTTGCCTCTCTCTAGTTTaGGATGAACTTTGTCTTCTC | + |
|
Preference number: 4 (lower is better) Translates to: AALRENSREGYAGYAGCSCLSLV*DELCLL Trigger: GAGAAGACAAAGTTCATCTCAAACTAGAGAGAGGCA...AGAACATCCTGCATAACCTGCATAACCTTCCCTGGAGTTCTCTCTCAGTGCAGC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000068423.10 ENSMUST00000122079.8 ENSMUST00000169470.2 |
||
| CDS-3UTR GCA 90 bp | CAGGTCTCTCAGTTGCTACTTAATAGTGCTGTTGCACAAGATGCCAAAAGAAGCAACACCATTGCTGGCTaGTTCCCTGGTAACATCCTG | + |
|
Preference number: 4 (lower is better) Translates to: QVSQLLLNSAVAQDAKRSNTIAG*FPGNIL Trigger: CAGGATGTTACCAGGGAAGCAGCCAGCAATGGTGTT...GCTTCTTTTGGCATCTTGTGCAACAGCACTATTAAGTAGCAACTGAGAGACCTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000068423.10 ENSMUST00000122079.8 ENSMUST00000169470.2 |
||
| CDS-3UTR CCA 90 bp | GGGATTAGTGACGTTTCCTTGGCACACAAATACTGCACCAGGTCTCTCAGTTGCGAGGCAAGGTCAAAGTaGTTGCCAATGTTTACTAAG | + |
|
Preference number: 4 (lower is better) Translates to: GISDVSLAHKYCTRSLSCEARSK*LPMFTK Trigger: CTTAGTAAACATTGGCAACCACTTTGACCTTGCCTC...GCAACTGAGAGACCTGGTGCAGTATTTGTGTGCCAAGGAAACGTCACTAATCCC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000068423.10 ENSMUST00000122079.8 ENSMUST00000169470.2 |
||
| CDS-3UTR CCA 90 bp | ACAACCCTCTCCTTGACAGATCAAAGGAAGATCTCGAGGAAGAGGCACTGGTCCTGCATTAAGCTGACCTaGATAGTTTGTCTGTTGTAC | + |
|
Preference number: 4 (lower is better) Translates to: TTLSLTDQRKISRKRHWSCIKLT*IVCLLY Trigger: GTACAACAGACAAACTATCCAGGTCAGCTTAATGCA...GGACCAGTGCCTCTTCCTCGAGATCTTCCTTTGATCTGTCAAGGAGAGGGTTGT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000068423.10 ENSMUST00000122079.8 ENSMUST00000169470.2 |
||
| CDS-3UTR TCA 90 bp | GCTGCACTGAGAGAGAACTCCAGGGAAGGTTATGCAGGTTATGCAGGATGTTCTCTCTCTAGTTTGAGATaGACTTTGTCTTCTCTTTCC | + |
|
Preference number: 4 (lower is better) Translates to: AALRENSREGYAGYAGCSLSSLR*TLSSLS Trigger: GGAAAGAGAAGACAAAGTTCATCTCAAACTAGAGAG...AGAACATCCTGCATAACCTGCATAACCTTCCCTGGAGTTCTCTCTCAGTGCAGC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000068423.10 ENSMUST00000122079.8 ENSMUST00000169470.2 |
||
| CDS-3UTR TCA 90 bp | TCACAGACGGTACAAAACAGAAACTGCAGTCCAATCGTGCAAAATTTGCTTCTCATTTCCAGCCTCCCATaGGGTTGCCTCTCTCTAGTT | + |
|
Preference number: 4 (lower is better) Translates to: SQTVQNRNCSPIVQNLLLISSLP*GCLSLV Trigger: AACTAGAGAGAGGCAACCTCATGGGAGGCTGGAAAT...GAGAAGCAAATTTTGCACGATTGGACTGCAGTTTCTGTTTTGTACCGTCTGTGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000068423.10 ENSMUST00000122079.8 ENSMUST00000122464.8 ENSMUST00000169470.2 |
||
| CDS-3UTR TCA 90 bp | GACGGTACAAAACAGAAACTGCAGTCCAATCGTGCAAAATTTGCTTCTCAGGATATTTCCAGCCTCCCATaGGGTTGCCTCTCTCTAGTT | + |
|
Preference number: 4 (lower is better) Translates to: DGTKQKLQSNRAKFASQDISSLP*GCLSLV Trigger: AACTAGAGAGAGGCAACCTCATGGGAGGCTGGAAAT...ATCCTGAGAAGCAAATTTTGCACGATTGGACTGCAGTTTCTGTTTTGTACCGTC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000068423.10 ENSMUST00000122079.8 ENSMUST00000122464.8 ENSMUST00000169470.2 |
||
| CDS-3UTR TCA 90 bp | ACAGACGGTACAAAACAGAAACTGCAGTCCAATCGTGCAAAATTTGCTTCTCAGATTTCCAGCCTCCCATaGGGTTGCCTCTCTCTAGTT | + |
|
Preference number: 4 (lower is better) Translates to: TDGTKQKLQSNRAKFASQISSLP*GCLSLV Trigger: AACTAGAGAGAGGCAACCTCATGGGAGGCTGGAAAT...CTGAGAAGCAAATTTTGCACGATTGGACTGCAGTTTCTGTTTTGTACCGTCTGT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000068423.10 ENSMUST00000122079.8 ENSMUST00000122464.8 ENSMUST00000169470.2 |
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| CDS-3UTR CCA 90 bp | AGCTTTAGAAGAAAGTCATTCTTCTACAGCAATAATCTGATGGAGGTGGGCCCACCTGGTCGAAGTAGATaGTCATGGTACGGTTGCTCA | + |
|
Preference number: 4 (lower is better) Translates to: SFRRKSFFYSNNLMEVGPPGRSR*SWYGCS Trigger: TGAGCAACCGTACCATGACCATCTACTTCGACCAGG...TGGGCCCACCTCCATCAGATTATTGCTGTAGAAGAATGACTTTCTTCTAAAGCT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000068423.10 ENSMUST00000122079.8 ENSMUST00000122464.8 ENSMUST00000169470.2 |
||
| CDS-3UTR TCA 90 bp | AGCTTTAGAAGAAAGTCATTCTTCTACAGCAATAATCTGATGGAGGTGGGCCCATGTCTTCTCTTTCCATaGGCAGCAGAACACCATTGC | + |
|
Preference number: 4 (lower is better) Translates to: SFRRKSFFYSNNLMEVGPCLLFP*AAEHHC Trigger: GCAATGGTGTTCTGCTGCTCATGGAAAGAGAAGACA...TGGGCCCACCTCCATCAGATTATTGCTGTAGAAGAATGACTTTCTTCTAAAGCT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000068423.10 ENSMUST00000122079.8 ENSMUST00000122464.8 ENSMUST00000169470.2 |
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| 3UTR CAA 72 bp | TTCCTTGGCACACAAATACTGCACCAGGTCTCTCAGTaGCTACTTAATAGTGCTGTTGCACAAGATGCCAAA | + |
|
Preference number: 4 (lower is better) Translates to: FLGTQILHQVSQ*LLNSAVAQDAK Trigger: TTTGGCATCTTGTGCAACAGCACTATTAAGTAGCAACTGAGAGACCTGGTGCAGTATTTGTGTGCCAAGGAA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000068423.10 ENSMUST00000122079.8 ENSMUST00000169470.2 |
||
| CDS-3UTR TCA 90 bp | TTCATCCACAGAGCATCAGTCAACACAACCCTCTCCTTGACAGATCAAAGGAAGCTCTCTAGTTTGAGATaGACTTTGTCTTCTCTTTCC | + |
|
Preference number: 4 (lower is better) Translates to: FIHRASVNTTLSLTDQRKLSSLR*TLSSLS Trigger: GGAAAGAGAAGACAAAGTTCATCTCAAACTAGAGAG...CTTCCTTTGATCTGTCAAGGAGAGGGTTGTGTTGACTGATGCTCTGTGGATGAA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000068423.10 ENSMUST00000122079.8 ENSMUST00000169470.2 |
||
| CDS-3UTR TCA 90 bp | AAGGGATTCATGAGCAATGAGCAATGCCAGGTTACTAAGGGATCCCAGAGAATATGCCTCTCTCTAGTTTaGGATGAACTTTGTCTTCTC | + |
|
Preference number: 4 (lower is better) Translates to: KGFMSNEQCQVTKGSQRICLSLV*DELCLL Trigger: GAGAAGACAAAGTTCATCTCAAACTAGAGAGAGGCA...TATTCTCTGGGATCCCTTAGTAACCTGGCATTGCTCATTGCTCATGAATCCCTT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000068423.10 ENSMUST00000122079.8 ENSMUST00000169470.2 |
||
| CDS-3UTR TCA 90 bp | GTTAAGCCAATGGTTCCAACAATAAAATCCGATATCGACTTTACAATCACGGGTATTTCCAGCCTCCCATaGGGTTGCCTCTCTCTAGTT | + |
|
Preference number: 4 (lower is better) Translates to: VKPMVPTIKSDIDFTITGISSLP*GCLSLV Trigger: AACTAGAGAGAGGCAACCTCATGGGAGGCTGGAAAT...ACCCGTGATTGTAAAGTCGATATCGGATTTTATTGTTGGAACCATTGGCTTAAC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000068423.10 ENSMUST00000122079.8 ENSMUST00000122464.8 ENSMUST00000169470.2 |
||
| CDS-3UTR CCA 90 bp | CAGGTCTCTCAGTTGCTACTTAATAGTGCTGTTGCACAAGATGCCAAAAGAAGCGAGGCAAGGTCAAAGTaGTTGCCAATGTTTACTAAG | + |
|
Preference number: 4 (lower is better) Translates to: QVSQLLLNSAVAQDAKRSEARSK*LPMFTK Trigger: CTTAGTAAACATTGGCAACCACTTTGACCTTGCCTC...GCTTCTTTTGGCATCTTGTGCAACAGCACTATTAAGTAGCAACTGAGAGACCTG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000068423.10 ENSMUST00000122079.8 ENSMUST00000169470.2 |
||
| 3UTR CAA 72 bp | TGCACCAGGTCTCTCAGTTGCTACTTAATAGTGCTGTaGCACAAGATGCCAAAAGAAGCAGGGTTTGAAAAA | + |
|
Preference number: 4 (lower is better) Translates to: CTRSLSCYLIVL*HKMPKEAGFEK Trigger: TTTTTCAAACCCTGCTTCTTTTGGCATCTTGTGCAACAGCACTATTAAGTAGCAACTGAGAGACCTGGTGCA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000068423.10 ENSMUST00000122079.8 ENSMUST00000169470.2 |
||
| CDS-3UTR TCA 90 bp | ACAGACGGTACAAAACAGAAACTGCAGTCCAATCGTGCAAAATTTGCTTCTCAGTGCCTCTCTCTAGTTTaGGATGAACTTTGTCTTCTC | + |
|
Preference number: 4 (lower is better) Translates to: TDGTKQKLQSNRAKFASQCLSLV*DELCLL Trigger: GAGAAGACAAAGTTCATCTCAAACTAGAGAGAGGCA...CTGAGAAGCAAATTTTGCACGATTGGACTGCAGTTTCTGTTTTGTACCGTCTGT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000068423.10 ENSMUST00000122079.8 ENSMUST00000122464.8 ENSMUST00000169470.2 |
||
| CDS-3UTR GCA 90 bp | CACCAGGTCTCTCAGTTGCTACTTAATAGTGCTGTTGCACAAGATGCCAAAAGACAAGGTCAAAGTGGTTaGCAATGTTTACTAAGACCT | + |
|
Preference number: 4 (lower is better) Translates to: HQVSQLLLNSAVAQDAKRQGQSG*QCLLRP Trigger: AGGTCTTAGTAAACATTGGCAACCACTTTGACCTTG...TCTTTTGGCATCTTGTGCAACAGCACTATTAAGTAGCAACTGAGAGACCTGGTG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000068423.10 ENSMUST00000122079.8 ENSMUST00000169470.2 |
||
| CDS-3UTR CCA 90 bp | GACGGTACAAAACAGAAACTGCAGTCCAATCGTGCAAAATTTGCTTCTCAGGATGTGCTACAAATATACTaGAGGCAAGGTCAAAGTGGT | + |
|
Preference number: 4 (lower is better) Translates to: DGTKQKLQSNRAKFASQDVLQIY*RQGQSG Trigger: ACCACTTTGACCTTGCCTCCAGTATATTTGTAGCAC...ATCCTGAGAAGCAAATTTTGCACGATTGGACTGCAGTTTCTGTTTTGTACCGTC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000068423.10 ENSMUST00000122079.8 ENSMUST00000122464.8 ENSMUST00000169470.2 |
||
| CDS-3UTR CCA 90 bp | ACAGACGGTACAAAACAGAAACTGCAGTCCAATCGTGCAAAATTTGCTTCTCAGGTGCTACAAATATACTaGAGGCAAGGTCAAAGTGGT | + |
|
Preference number: 4 (lower is better) Translates to: TDGTKQKLQSNRAKFASQVLQIY*RQGQSG Trigger: ACCACTTTGACCTTGCCTCCAGTATATTTGTAGCAC...CTGAGAAGCAAATTTTGCACGATTGGACTGCAGTTTCTGTTTTGTACCGTCTGT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000068423.10 ENSMUST00000122079.8 ENSMUST00000122464.8 ENSMUST00000169470.2 |
||
| CDS-3UTR TCA 90 bp | GACGGTACAAAACAGAAACTGCAGTCCAATCGTGCAAAATTTGCTTCTCAGGATCTCTCTAGTTTGAGATaGACTTTGTCTTCTCTTTCC | + |
|
Preference number: 4 (lower is better) Translates to: DGTKQKLQSNRAKFASQDLSSLR*TLSSLS Trigger: GGAAAGAGAAGACAAAGTTCATCTCAAACTAGAGAG...ATCCTGAGAAGCAAATTTTGCACGATTGGACTGCAGTTTCTGTTTTGTACCGTC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000068423.10 ENSMUST00000122079.8 ENSMUST00000122464.8 ENSMUST00000169470.2 |
||
| CDS-3UTR GCA 90 bp | CACAGACGGTACAAAACAGAAACTGCAGTCCAATCGTGCAAAATTTGCTTCTCACAAGGTCAAAGTGGTTaGCAATGTTTACTAAGACCT | + |
|
Preference number: 4 (lower is better) Translates to: HRRYKTETAVQSCKICFSQGQSG*QCLLRP Trigger: AGGTCTTAGTAAACATTGGCAACCACTTTGACCTTG...TGAGAAGCAAATTTTGCACGATTGGACTGCAGTTTCTGTTTTGTACCGTCTGTG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000068423.10 ENSMUST00000122079.8 ENSMUST00000122464.8 ENSMUST00000169470.2 |
||
| CDS-3UTR CCA 90 bp | ACGGTACAAAACAGAAACTGCAGTCCAATCGTGCAAAATTTGCTTCTCAGGATAGTGCTACAAATATACTaGAGGCAAGGTCAAAGTGGT | + |
|
Preference number: 4 (lower is better) Translates to: TVQNRNCSPIVQNLLLRIVLQIY*RQGQSG Trigger: ACCACTTTGACCTTGCCTCCAGTATATTTGTAGCAC...TATCCTGAGAAGCAAATTTTGCACGATTGGACTGCAGTTTCTGTTTTGTACCGT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000068423.10 ENSMUST00000122079.8 ENSMUST00000122464.8 ENSMUST00000169470.2 |
||
| CDS-3UTR CCA 90 bp | AGACGGTACAAAACAGAAACTGCAGTCCAATCGTGCAAAATTTGCTTCTCAGGATGCATTAAGCTGACCTaGATAGTTTGTCTGTTGTAC | + |
|
Preference number: 4 (lower is better) Translates to: RRYKTETAVQSCKICFSGCIKLT*IVCLLY Trigger: GTACAACAGACAAACTATCCAGGTCAGCTTAATGCA...TCCTGAGAAGCAAATTTTGCACGATTGGACTGCAGTTTCTGTTTTGTACCGTCT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000068423.10 ENSMUST00000122079.8 ENSMUST00000122464.8 ENSMUST00000169470.2 |
||
| 3UTR CAA 72 bp | AAAGGACAAATTAACATCCAGTTTGAGGTCACATCTTaGATTGCTTTGGGATTAGTGACGTTTCCTTGGCAC | + |
|
Preference number: 4 (lower is better) Translates to: KGQINIQFEVTS*IALGLVTFPWH Trigger: GTGCCAAGGAAACGTCACTAATCCCAAAGCAATCAAAGATGTGACCTCAAACTGGATGTTAATTTGTCCTTT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000068423.10 ENSMUST00000122079.8 ENSMUST00000169470.2 |
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| CDS-3UTR CCA 90 bp | ATGGTTCCAACAATAAAATCCGATATCGACTTTACAATCACGGGTACAAATTGCGTGCTACAAATATACTaGAGGCAAGGTCAAAGTGGT | + |
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Preference number: 4 (lower is better) Translates to: MVPTIKSDIDFTITGTNCVLQIY*RQGQSG Trigger: ACCACTTTGACCTTGCCTCCAGTATATTTGTAGCAC...GCAATTTGTACCCGTGATTGTAAAGTCGATATCGGATTTTATTGTTGGAACCAT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000068423.10 ENSMUST00000122079.8 ENSMUST00000122464.8 ENSMUST00000169470.2 |
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| CDS-3UTR TCA 90 bp | TGGTTACATTGTTACACAAAGGACAAATTAACATCCAGTTTGAGGTCACATCTTTGCCTCTCTCTAGTTTaGGATGAACTTTGTCTTCTC | + |
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Preference number: 4 (lower is better) Translates to: WLHCYTKDKLTSSLRSHLCLSLV*DELCLL Trigger: GAGAAGACAAAGTTCATCTCAAACTAGAGAGAGGCA...AAGATGTGACCTCAAACTGGATGTTAATTTGTCCTTTGTGTAACAATGTAACCA 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000068423.10 ENSMUST00000122079.8 ENSMUST00000169470.2 |
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| CDS-3UTR CCA 90 bp | ATGGTTCCAACAATAAAATCCGATATCGACTTTACAATCACGGGTACAAATTGCTGCATTAAGCTGACCTaGATAGTTTGTCTGTTGTAC | + |
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Preference number: 4 (lower is better) Translates to: MVPTIKSDIDFTITGTNCCIKLT*IVCLLY Trigger: GTACAACAGACAAACTATCCAGGTCAGCTTAATGCA...GCAATTTGTACCCGTGATTGTAAAGTCGATATCGGATTTTATTGTTGGAACCAT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000068423.10 ENSMUST00000122079.8 ENSMUST00000122464.8 ENSMUST00000169470.2 |
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| 3UTR CAA 72 bp | CTTCTTAAACTAATTAGAGGCCAGGTTCCCGAGGAATaGTCAATAGTCAAAGAAAATACTGGAGCTTTAGAA | + |
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Preference number: 4 (lower is better) Translates to: LLKLIRGQVPEE*SIVKENTGALE Trigger: TTCTAAAGCTCCAGTATTTTCTTTGACTATTGACAATTCCTCGGGAACCTGGCCTCTAATTAGTTTAAGAAG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000068423.10 ENSMUST00000122079.8 ENSMUST00000122464.8 ENSMUST00000169470.2 |
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| CDS-3UTR CCA 90 bp | TGGTTACATTGTTACACAAAGGACAAATTAACATCCAGTTTGAGGTCACATCTTTGCATTAAGCTGACCTaGATAGTTTGTCTGTTGTAC | + |
|
Preference number: 4 (lower is better) Translates to: WLHCYTKDKLTSSLRSHLCIKLT*IVCLLY Trigger: GTACAACAGACAAACTATCCAGGTCAGCTTAATGCA...AAGATGTGACCTCAAACTGGATGTTAATTTGTCCTTTGTGTAACAATGTAACCA 37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000068423.10 ENSMUST00000122079.8 ENSMUST00000169470.2 |
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| CDS-3UTR CAA 90 bp | GCACTTTTCGACAGGTTACCAATGCCCAGCTCCCTCCCAAGACCCCCAAGACCCGCGGAGAAGGCCACCTaGGCACTGCCTGAGCGCACA | + |
|
Preference number: 5 (lower is better) Translates to: ALFDRLPMPSSLPRPPRPAEKAT*ALPERT Trigger: TGTGCGCTCAGGCAGTGCCAAGGTGGCCTTCTCCGC...GGGTCTTGGGGGTCTTGGGAGGGAGCTGGGCATTGGTAACCTGTCGAAAAGTGC 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000068423.10 ENSMUST00000122079.8 ENSMUST00000122464.8 ENSMUST00000169470.2 |
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| CDS-3UTR CAA 90 bp | AATGCCCAGCTCCCTCCCAAGACCCCCAAGACCCTAGGGAAAAGCTACGGAATGGCGGAGAAGGCCACCTaGGCACTGCCTGAGCGCACA | + |
|
Preference number: 5 (lower is better) Translates to: NAQLPPKTPKTLGKSYGMAEKAT*ALPERT Trigger: TGTGCGCTCAGGCAGTGCCAAGGTGGCCTTCTCCGC...CATTCCGTAGCTTTTCCCTAGGGTCTTGGGGGTCTTGGGAGGGAGCTGGGCATT 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000068423.10 ENSMUST00000122079.8 ENSMUST00000122464.8 ENSMUST00000169470.2 |
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| CDS-3UTR CAA 90 bp | GCACTTTTCGACAGGTTACCAATGCCCAGCTCCCTCCCAAGACCCCCAAGACCCTCTGACGGCTCGTGGTaGGTGCTCCGAGTAGCGGAG | + |
|
Preference number: 5 (lower is better) Translates to: ALFDRLPMPSSLPRPPRPSDGSW*VLRVAE Trigger: CTCCGCTACTCGGAGCACCAACCACGAGCCGTCAGA...GGGTCTTGGGGGTCTTGGGAGGGAGCTGGGCATTGGTAACCTGTCGAAAAGTGC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000068423.10 ENSMUST00000122079.8 ENSMUST00000122464.8 ENSMUST00000169470.2 |
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| CDS-3UTR CAA 90 bp | ACAACCCTCTCCTTGACAGATCAAAGGAAGATCTCGAGGAAGAGGCACTGGTCCGCGGAGAAGGCCACCTaGGCACTGCCTGAGCGCACA | + |
|
Preference number: 5 (lower is better) Translates to: TTLSLTDQRKISRKRHWSAEKAT*ALPERT Trigger: TGTGCGCTCAGGCAGTGCCAAGGTGGCCTTCTCCGC...GGACCAGTGCCTCTTCCTCGAGATCTTCCTTTGATCTGTCAAGGAGAGGGTTGT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000068423.10 ENSMUST00000122079.8 ENSMUST00000169470.2 |
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| CDS-3UTR CAA 90 bp | ACAACCCTCTCCTTGACAGATCAAAGGAAGATCTCGAGGAAGAGGCACTGGTCCATGGTCATGGTACGGTaGCTCATCTCTGACGGCTCG | + |
|
Preference number: 5 (lower is better) Translates to: TTLSLTDQRKISRKRHWSMVMVR*LISDGS Trigger: CGAGCCGTCAGAGATGAGCAACCGTACCATGACCAT...GGACCAGTGCCTCTTCCTCGAGATCTTCCTTTGATCTGTCAAGGAGAGGGTTGT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000068423.10 ENSMUST00000122079.8 ENSMUST00000169470.2 |
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| CDS-3UTR CAA 90 bp | ACAACCCTCTCCTTGACAGATCAAAGGAAGATCTCGAGGAAGAGGCACTGGTCCAGCAGCAGAACACCATaGCTGGCTGCTTCCCTGGTA | + |
|
Preference number: 5 (lower is better) Translates to: TTLSLTDQRKISRKRHWSSSRTP*LAASLV Trigger: TACCAGGGAAGCAGCCAGCAATGGTGTTCTGCTGCT...GGACCAGTGCCTCTTCCTCGAGATCTTCCTTTGATCTGTCAAGGAGAGGGTTGT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000068423.10 ENSMUST00000122079.8 ENSMUST00000169470.2 |
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| CDS-3UTR CAA 90 bp | ACAGACGGTACAAAACAGAAACTGCAGTCCAATCGTGCAAAATTTGCTTCTCAGGCGGAGAAGGCCACCTaGGCACTGCCTGAGCGCACA | + |
|
Preference number: 5 (lower is better) Translates to: TDGTKQKLQSNRAKFASQAEKAT*ALPERT Trigger: TGTGCGCTCAGGCAGTGCCAAGGTGGCCTTCTCCGC...CTGAGAAGCAAATTTTGCACGATTGGACTGCAGTTTCTGTTTTGTACCGTCTGT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000068423.10 ENSMUST00000122079.8 ENSMUST00000122464.8 ENSMUST00000169470.2 |
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| CDS-3UTR CAA 90 bp | CACAGGTCAAAGACTGTCTGGTTAGGTGGTCCTCTGCTGGGCTCTTGCTTTAAGGCTGACCTGGATAGTTaGTCTGTTGTACACTTTGAC | + |
|
Preference number: 5 (lower is better) Translates to: HRSKTVWLGGPLLGSCFKADLDS*SVVHFD Trigger: GTCAAAGTGTACAACAGACAAACTATCCAGGTCAGC...CTTAAAGCAAGAGCCCAGCAGAGGACCACCTAACCAGACAGTCTTTGACCTGTG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000068423.10 ENSMUST00000122079.8 ENSMUST00000122464.8 ENSMUST00000169470.2 |
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| CDS-3UTR CAA 90 bp | TCACAGACGGTACAAAACAGAAACTGCAGTCCAATCGTGCAAAATTTGCTTCTCATGGTCATGGTACGGTaGCTCATCTCTGACGGCTCG | + |
|
Preference number: 5 (lower is better) Translates to: SQTVQNRNCSPIVQNLLLMVMVR*LISDGS Trigger: CGAGCCGTCAGAGATGAGCAACCGTACCATGACCAT...GAGAAGCAAATTTTGCACGATTGGACTGCAGTTTCTGTTTTGTACCGTCTGTGA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000068423.10 ENSMUST00000122079.8 ENSMUST00000122464.8 ENSMUST00000169470.2 |
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| CDS-3UTR CAA 90 bp | AGCTTTAGAAGAAAGTCATTCTTCTACAGCAATAATCTGATGGAGGTGGGCCCAAGCAGCAGAACACCATaGCTGGCTGCTTCCCTGGTA | + |
|
Preference number: 5 (lower is better) Translates to: SFRRKSFFYSNNLMEVGPSSRTP*LAASLV Trigger: TACCAGGGAAGCAGCCAGCAATGGTGTTCTGCTGCT...TGGGCCCACCTCCATCAGATTATTGCTGTAGAAGAATGACTTTCTTCTAAAGCT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000068423.10 ENSMUST00000122079.8 ENSMUST00000122464.8 ENSMUST00000169470.2 |
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| CDS-3UTR CAA 90 bp | ACAAAACAGAAACTGCAGTCCAATCGTGCAAAATTTGCTTCTCAGGATAAAGCAATGGTCATGGTACGGTaGCTCATCTCTGACGGCTCG | + |
|
Preference number: 5 (lower is better) Translates to: TKQKLQSNRAKFASQDKAMVMVR*LISDGS Trigger: CGAGCCGTCAGAGATGAGCAACCGTACCATGACCAT...TGCTTTATCCTGAGAAGCAAATTTTGCACGATTGGACTGCAGTTTCTGTTTTGT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000068423.10 ENSMUST00000122079.8 ENSMUST00000122464.8 ENSMUST00000169470.2 |
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| CDS-3UTR CAA 90 bp | TTCATCCACAGAGCATCAGTCAACACAACCCTCTCCTTGACAGATCAAAGGAAGGCTGACCTGGATAGTTaGTCTGTTGTACACTTTGAC | + |
|
Preference number: 5 (lower is better) Translates to: FIHRASVNTTLSLTDQRKADLDS*SVVHFD Trigger: GTCAAAGTGTACAACAGACAAACTATCCAGGTCAGC...CTTCCTTTGATCTGTCAAGGAGAGGGTTGTGTTGACTGATGCTCTGTGGATGAA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000068423.10 ENSMUST00000122079.8 ENSMUST00000169470.2 |
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| CDS-3UTR CAA 90 bp | ACAAAACAGAAACTGCAGTCCAATCGTGCAAAATTTGCTTCTCAGGATAAAGCAAGCAGCAGAACACCATaGCTGGCTGCTTCCCTGGTA | + |
|
Preference number: 5 (lower is better) Translates to: TKQKLQSNRAKFASQDKASSRTP*LAASLV Trigger: TACCAGGGAAGCAGCCAGCAATGGTGTTCTGCTGCT...TGCTTTATCCTGAGAAGCAAATTTTGCACGATTGGACTGCAGTTTCTGTTTTGT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000068423.10 ENSMUST00000122079.8 ENSMUST00000122464.8 ENSMUST00000169470.2 |
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| CDS-3UTR CAA 90 bp | CACGGGTACAAATTGCTCAAATCGATAATTTCATTTCTCCTTAAGACCTTGTCTAGCAGCAGAACACCATaGCTGGCTGCTTCCCTGGTA | + |
|
Preference number: 5 (lower is better) Translates to: HGYKLLKSIISFLLKTLSSSRTP*LAASLV Trigger: TACCAGGGAAGCAGCCAGCAATGGTGTTCTGCTGCT...AGACAAGGTCTTAAGGAGAAATGAAATTATCGATTTGAGCAATTTGTACCCGTG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000068423.10 ENSMUST00000122079.8 ENSMUST00000122464.8 ENSMUST00000169470.2 |
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| CDS GCA 90 bp | CACTTTGACCACGTGGAAGCTGAAGCTATAAATTCCCTTTCTTGGTaGTACAAATATACTGGAGGCAAGGTCAAAGTGGTTGCCAATGTT | + |
|
Preference number: 5 (lower is better) Translates to: HFDHVEAEAINSLSW*YKYTGGKVKVVANV Trigger: AACATTGGCAACCACTTTGACCTTGCCTCCAGTATATTTGTAGCACCAAGAAAGGGAATTTATAGCTTCAGCTTCCACGTGGTCAAAGTG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000068423.10 ENSMUST00000122079.8 ENSMUST00000122464.8 ENSMUST00000169470.2 |
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| CDS-3UTR CAA 90 bp | GACGGTACAAAACAGAAACTGCAGTCCAATCGTGCAAAATTTGCTTCTCAGGATGCAAGGTCAAAGTGGTaGCCAATGTTTACTAAGACC | + |
|
Preference number: 5 (lower is better) Translates to: DGTKQKLQSNRAKFASQDARSKW*PMFTKT Trigger: GGTCTTAGTAAACATTGGCAACCACTTTGACCTTGC...ATCCTGAGAAGCAAATTTTGCACGATTGGACTGCAGTTTCTGTTTTGTACCGTC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000068423.10 ENSMUST00000122079.8 ENSMUST00000122464.8 ENSMUST00000169470.2 |
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| CDS-3UTR CAA 90 bp | ACAGACGGTACAAAACAGAAACTGCAGTCCAATCGTGCAAAATTTGCTTCTCAGGCAAGGTCAAAGTGGTaGCCAATGTTTACTAAGACC | + |
|
Preference number: 5 (lower is better) Translates to: TDGTKQKLQSNRAKFASQARSKW*PMFTKT Trigger: GGTCTTAGTAAACATTGGCAACCACTTTGACCTTGC...CTGAGAAGCAAATTTTGCACGATTGGACTGCAGTTTCTGTTTTGTACCGTCTGT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000068423.10 ENSMUST00000122079.8 ENSMUST00000122464.8 ENSMUST00000169470.2 |
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| CDS-3UTR CAA 90 bp | ACAGACGGTACAAAACAGAAACTGCAGTCCAATCGTGCAAAATTTGCTTCTCAGGCTGACCTGGATAGTTaGTCTGTTGTACACTTTGAC | + |
|
Preference number: 5 (lower is better) Translates to: TDGTKQKLQSNRAKFASQADLDS*SVVHFD Trigger: GTCAAAGTGTACAACAGACAAACTATCCAGGTCAGC...CTGAGAAGCAAATTTTGCACGATTGGACTGCAGTTTCTGTTTTGTACCGTCTGT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000068423.10 ENSMUST00000122079.8 ENSMUST00000122464.8 ENSMUST00000169470.2 |
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| CDS-3UTR CAA 90 bp | GACGGTACAAAACAGAAACTGCAGTCCAATCGTGCAAAATTTGCTTCTCAGGATGCTGACCTGGATAGTTaGTCTGTTGTACACTTTGAC | + |
|
Preference number: 5 (lower is better) Translates to: DGTKQKLQSNRAKFASQDADLDS*SVVHFD Trigger: GTCAAAGTGTACAACAGACAAACTATCCAGGTCAGC...ATCCTGAGAAGCAAATTTTGCACGATTGGACTGCAGTTTCTGTTTTGTACCGTC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000068423.10 ENSMUST00000122079.8 ENSMUST00000122464.8 ENSMUST00000169470.2 |
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| CDS-3UTR CAA 90 bp | ACAAAACAGAAACTGCAGTCCAATCGTGCAAAATTTGCTTCTCAGGATAAAGCAGCAAGGTCAAAGTGGTaGCCAATGTTTACTAAGACC | + |
|
Preference number: 5 (lower is better) Translates to: TKQKLQSNRAKFASQDKAARSKW*PMFTKT Trigger: GGTCTTAGTAAACATTGGCAACCACTTTGACCTTGC...TGCTTTATCCTGAGAAGCAAATTTTGCACGATTGGACTGCAGTTTCTGTTTTGT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000068423.10 ENSMUST00000122079.8 ENSMUST00000122464.8 ENSMUST00000169470.2 |
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| CDS-3UTR CAA 90 bp | CACGGGTACAAATTGCTCAAATCGATAATTTCATTTCTCCTTAAGACCTTGTCTGCAAGGTCAAAGTGGTaGCCAATGTTTACTAAGACC | + |
|
Preference number: 5 (lower is better) Translates to: HGYKLLKSIISFLLKTLSARSKW*PMFTKT Trigger: GGTCTTAGTAAACATTGGCAACCACTTTGACCTTGC...AGACAAGGTCTTAAGGAGAAATGAAATTATCGATTTGAGCAATTTGTACCCGTG 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000068423.10 ENSMUST00000122079.8 ENSMUST00000122464.8 ENSMUST00000169470.2 |
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| CDS TCA 72 bp | CAGCCTCCCATGAGGTTGCCTCTCTCTAGTTTGAGATaGACTTTGTCTTCTCTTTCCATGAGCAGCAGAACA | + |
|
Preference number: 6 (lower is better) Translates to: QPPMRLPLSSLR*TLSSLSMSSRT Trigger: TGTTCTGCTGCTCATGGAAAGAGAAGACAAAGTTCATCTCAAACTAGAGAGAGGCAACCTCATGGGAGGCTG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000068423.10 ENSMUST00000122079.8 ENSMUST00000122464.8 ENSMUST00000169470.2 |
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| CDS GCA 72 bp | GTGCTACAAATATACTGGAGGCAAGGTCAAAGTGGTTaGCAATGTTTACTAAGACCTGGTCGAAGTAGATGG | + |
|
Preference number: 6 (lower is better) Translates to: VLQIYWRQGQSG*QCLLRPGRSRW Trigger: CCATCTACTTCGACCAGGTCTTAGTAAACATTGGCAACCACTTTGACCTTGCCTCCAGTATATTTGTAGCAC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000068423.10 ENSMUST00000122079.8 ENSMUST00000122464.8 ENSMUST00000169470.2 |
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| CDS CCA 72 bp | GACCACGTGGAAGCTGAAGCTATAAATTCCCTTTCTTaGTGCTACAAATATACTGGAGGCAAGGTCAAAGTG | + |
|
Preference number: 6 (lower is better) Translates to: DHVEAEAINSLS*CYKYTGGKVKV Trigger: CACTTTGACCTTGCCTCCAGTATATTTGTAGCACCAAGAAAGGGAATTTATAGCTTCAGCTTCCACGTGGTC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000068423.10 ENSMUST00000122079.8 ENSMUST00000122464.8 ENSMUST00000169470.2 |
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| CDS GCA 72 bp | CACGTGGAAGCTGAAGCTATAAATTCCCTTTCTTGGTaGTACAAATATACTGGAGGCAAGGTCAAAGTGGTT | + |
|
Preference number: 6 (lower is better) Translates to: HVEAEAINSLSW*YKYTGGKVKVV Trigger: AACCACTTTGACCTTGCCTCCAGTATATTTGTAGCACCAAGAAAGGGAATTTATAGCTTCAGCTTCCACGTG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000068423.10 ENSMUST00000122079.8 ENSMUST00000122464.8 ENSMUST00000169470.2 |
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