Pregenerated sensors for CBLN1 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000031654Ensembl transcript IDs: ENSMUST00000034076.16, ENSMUST00000169693.2
Found 87 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | GAAAACCCTGGAGAAGGGCTCAGGACCACCAGCGCCCACCCGGGCTaGGTATCTCGGTCTTGGACCCTCCGCTTCCTCCCGCTTCTGGCG | + |
|
Preference number: 1 (lower is better) Translates to: ENPGEGLRTTSAHPG*VSRSWTLRFLPLLA Trigger: CGCCAGAAGCGGGAGGAAGCGGAGGGTCCAAGACCGAGATACGCAGCCCGGGTGGGCGCTGGTGGTCCTGAGCCCTTCTCCAGGGTTTTC 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034076.16 |
||
| 3UTR CCA 90 bp | GCCGCCCGGGTTTGTTTGGCGGGTGGACCTCGGGTTCAGAGGCGCTaGTACAAAGTGTCAGGTGCTTCGGGCGCCGCGGAGCGGATAGAG | + |
|
Preference number: 1 (lower is better) Translates to: AARVCLAGGPRVQRR*YKVSGASGAAERIE Trigger: CTCTATCCGCTCCGCGGCGCCCGAAGCACCTGACACTTTGTACCAGCGCCTCTGAACCCGAGGTCCACCCGCCAAACAAACCCGGGCGGC 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034076.16 |
||
| 3UTR GCA 90 bp | AGAAGGCCTTGTGCCCTGGCCTCTCCTTGCAGCTTCCAAGTCTCTTaGTTCTCCGCCCGCCTCAACCTCGCAACCCGGAAAAGGCGAAGT | + |
|
Preference number: 1 (lower is better) Translates to: RRPCALASPCSFQVS*FSARLNLATRKRRS Trigger: ACTTCGCCTTTTCCGGGTTGCGAGGTTGAGGCGGGCGGAGAAGCAAGAGACTTGGAAGCTGCAAGGAGAGGCCAGGGCACAAGGCCTTCT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000034076.16 ENSMUST00000169693.2 |
||
| 3UTR GCA 90 bp | GCAGAAATGGCTCTGCGAAGAAGGCCTTGTGCCCTGGCCTCTCCTTaGAGCTTCCAAGTCTCTTGCTTCTCCGCCCGCCTCAACCTCGCA | + |
|
Preference number: 1 (lower is better) Translates to: AEMALRRRPCALASP*SFQVSCFSARLNLA Trigger: TGCGAGGTTGAGGCGGGCGGAGAAGCAAGAGACTTGGAAGCTGCAAGGAGAGGCCAGGGCACAAGGCCTTCTTCGCAGAGCCATTTCTGC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000034076.16 ENSMUST00000169693.2 |
||
| 3UTR GCA 90 bp | TGCTGCGGGAGACAGCGCAGAAATGGCTCTGCGAAGAAGGCCTTGTaGCCTGGCCTCTCCTTGCAGCTTCCAAGTCTCTTGCTTCTCCGC | + |
|
Preference number: 1 (lower is better) Translates to: CCGRQRRNGSAKKAL*PGLSLQLPSLLLLR Trigger: GCGGAGAAGCAAGAGACTTGGAAGCTGCAAGGAGAGGCCAGGGCACAAGGCCTTCTTCGCAGAGCCATTTCTGCGCTGTCTCCCGCAGCA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000034076.16 ENSMUST00000169693.2 |
||
| 3UTR GCA 90 bp | AAAGGCAAAGGGAGCCTGCTGCGGGAGACAGCGCAGAAATGGCTCTaGGAAGAAGGCCTTGTGCCCTGGCCTCTCCTTGCAGCTTCCAAG | + |
|
Preference number: 1 (lower is better) Translates to: KGKGSLLRETAQKWL*EEGLVPWPLLAASK Trigger: CTTGGAAGCTGCAAGGAGAGGCCAGGGCACAAGGCCTTCTTCGCAGAGCCATTTCTGCGCTGTCTCCCGCAGCAGGCTCCCTTTGCCTTT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000034076.16 ENSMUST00000169693.2 |
||
| 3UTR GCA 90 bp | CTTTCCACCAAAGCAGGGGACACAGGAAAGGCAAAGGGAGCCTGCTaGGGGAGACAGCGCAGAAATGGCTCTGCGAAGAAGGCCTTGTGC | + |
|
Preference number: 1 (lower is better) Translates to: LSTKAGDTGKAKGAC*GRQRRNGSAKKALC Trigger: GCACAAGGCCTTCTTCGCAGAGCCATTTCTGCGCTGTCTCCCGCAGCAGGCTCCCTTTGCCTTTCCTGTGTCCCCTGCTTTGGTGGAAAG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000034076.16 |
||
| 3UTR CCA 90 bp | CACCTTGGTACCCAGTGTAGCTACGAACACGTAGGAAGTTTCCGGTaGCGCCGCTTCCTCGCCCTGGTAATTTTCGGCCTCTTTCTCACT | + |
|
Preference number: 1 (lower is better) Translates to: HLGTQCSYEHVGSFR*RRFLALVIFGLFLT Trigger: AGTGAGAAAGAGGCCGAAAATTACCAGGGCGAGGAAGCGGCGCCACCGGAAACTTCCTACGTGTTCGTAGCTACACTGGGTACCAAGGTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000034076.16 ENSMUST00000169693.2 |
||
| 3UTR CCA 90 bp | TACAGAGGAAGAAGAAGCGTCCCGAAGAACCTCCTTGGCGGTTGGTaGAGCCACAGAACACGGGGCATTGACAAGCATCAGAGAACAAAC | + |
|
Preference number: 1 (lower is better) Translates to: YRGRRSVPKNLLGGW*SHRTRGIDKHQRTN Trigger: GTTTGTTCTCTGATGCTTGTCAATGCCCCGTGTTCTGTGGCTCCACCAACCGCCAAGGAGGTTCTTCGGGACGCTTCTTCTTCCTCTGTA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000034076.16 ENSMUST00000169693.2 |
||
| 3UTR CCA 90 bp | TGTTACAGAGGAAGAAGAAGCGTCCCGAAGAACCTCCTTGGCGGTTaGTGGAGCCACAGAACACGGGGCATTGACAAGCATCAGAGAACA | + |
|
Preference number: 1 (lower is better) Translates to: CYRGRRSVPKNLLGG*WSHRTRGIDKHQRT Trigger: TGTTCTCTGATGCTTGTCAATGCCCCGTGTTCTGTGGCTCCACCAACCGCCAAGGAGGTTCTTCGGGACGCTTCTTCTTCCTCTGTAACA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000034076.16 ENSMUST00000169693.2 |
||
| 3UTR CAA 90 bp | AGGGCTCAGGACCACCAGCGCCCACCCGGGCTGCGTATCTCGGTCTaGGACCCTCCGCTTCCTCCCGCTTCTGGCGTTGCGTCACCCGCG | + |
|
Preference number: 2 (lower is better) Translates to: RAQDHQRPPGLRISV*DPPLPPASGVASPA Trigger: CGCGGGTGACGCAACGCCAGAAGCGGGAGGAAGCGGAGGGTCCAAGACCGAGATACGCAGCCCGGGTGGGCGCTGGTGGTCCTGAGCCCT 70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034076.16 |
||
| 3UTR-3UTR CCA 90 bp | ACCCTGGAGAAGGGCTCAGGACCACCAGCGCCCACCCGGGCTGCGTATCTCGGTGAAGGCCTTGTGCCCTaGCCTCTCCTTGCAGCTTCC | + |
|
Preference number: 2 (lower is better) Translates to: TLEKGSGPPAPTRAAYLGEGLVP*PLLAAS Trigger: GGAAGCTGCAAGGAGAGGCCAGGGCACAAGGCCTTC...ACCGAGATACGCAGCCCGGGTGGGCGCTGGTGGTCCTGAGCCCTTCTCCAGGGT 66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034076.16 |
||
| 3UTR CAA 90 bp | GTCCTGCGAATGAGCGCAATCGCGAGTCCGGCCGCCCGGGTTTGTTaGGCGGGTGGACCTCGGGTTCAGAGGCGCTGGTACAAAGTGTCA | + |
|
Preference number: 2 (lower is better) Translates to: VLRMSAIASPAARVC*AGGPRVQRRWYKVS Trigger: TGACACTTTGTACCAGCGCCTCTGAACCCGAGGTCCACCCGCCAAACAAACCCGGGCGGCCGGACTCGCGATTGCGCTCATTCGCAGGAC 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034076.16 |
||
| 3UTR CAA 90 bp | GAAAGTCCTGCGAATGAGCGCAATCGCGAGTCCGGCCGCCCGGGTTaGTTTGGCGGGTGGACCTCGGGTTCAGAGGCGCTGGTACAAAGT | + |
|
Preference number: 2 (lower is better) Translates to: ESPANERNRESGRPG*FGGWTSGSEALVQS Trigger: ACTTTGTACCAGCGCCTCTGAACCCGAGGTCCACCCGCCAAACAAACCCGGGCGGCCGGACTCGCGATTGCGCTCATTCGCAGGACTTTC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034076.16 |
||
| 3UTR CAA 90 bp | CGCAGAAATGGCTCTGCGAAGAAGGCCTTGTGCCCTGGCCTCTCCTaGCAGCTTCCAAGTCTCTTGCTTCTCCGCCCGCCTCAACCTCGC | + |
|
Preference number: 2 (lower is better) Translates to: RRNGSAKKALCPGLS*QLPSLLLLRPPQPR Trigger: GCGAGGTTGAGGCGGGCGGAGAAGCAAGAGACTTGGAAGCTGCAAGGAGAGGCCAGGGCACAAGGCCTTCTTCGCAGAGCCATTTCTGCG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000034076.16 ENSMUST00000169693.2 |
||
| 3UTR CAA 90 bp | AAGAAGGCCTTGTGCCCTGGCCTCTCCTTGCAGCTTCCAAGTCTCTaGCTTCTCCGCCCGCCTCAACCTCGCAACCCGGAAAAGGCGAAG | + |
|
Preference number: 2 (lower is better) Translates to: KKALCPGLSLQLPSL*LLRPPQPRNPEKAK Trigger: CTTCGCCTTTTCCGGGTTGCGAGGTTGAGGCGGGCGGAGAAGCAAGAGACTTGGAAGCTGCAAGGAGAGGCCAGGGCACAAGGCCTTCTT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000034076.16 ENSMUST00000169693.2 |
||
| 3UTR CAA 90 bp | GCCTGCTGCGGGAGACAGCGCAGAAATGGCTCTGCGAAGAAGGCCTaGTGCCCTGGCCTCTCCTTGCAGCTTCCAAGTCTCTTGCTTCTC | + |
|
Preference number: 2 (lower is better) Translates to: ACCGRQRRNGSAKKA*CPGLSLQLPSLLLL Trigger: GAGAAGCAAGAGACTTGGAAGCTGCAAGGAGAGGCCAGGGCACAAGGCCTTCTTCGCAGAGCCATTTCTGCGCTGTCTCCCGCAGCAGGC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000034076.16 ENSMUST00000169693.2 |
||
| 3UTR-3UTR CCA 90 bp | GCAGGGGACACAGGAAAGGCAAAGGGAGCCTGCTGCGGGAGACAGCGCAGAAATAACCTCCTTGGCGGTTaGTGGAGCCACAGAACACGG | + |
|
Preference number: 2 (lower is better) Translates to: AGDTGKAKGACCGRQRRNNLLGG*WSHRTR Trigger: CCGTGTTCTGTGGCTCCACCAACCGCCAAGGAGGTT...ATTTCTGCGCTGTCTCCCGCAGCAGGCTCCCTTTGCCTTTCCTGTGTCCCCTGC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000034076.16 ENSMUST00000169693.2 |
||
| 3UTR-3UTR GCA 90 bp | TGGCCTCTCCTTGCAGCTTCCAAGTCTCTTGCTTCTCCGCCCGCCTCAACCTCGCTCTTCCTCGATTACTaGGACTGGCTTGGGGAAGGC | + |
|
Preference number: 2 (lower is better) Translates to: WPLLAASKSLASPPASTSLFLDY*DWLGEG Trigger: GCCTTCCCCAAGCCAGTCGCAGTAATCGAGGAAGAG...CGAGGTTGAGGCGGGCGGAGAAGCAAGAGACTTGGAAGCTGCAAGGAGAGGCCA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000034076.16 ENSMUST00000169693.2 |
||
| 3UTR-3UTR GCA 90 bp | TACGAACACGTAGGAAGTTTCCGGTGGCGCCGCTTCCTCGCCCTGGTAATTTTCCTCCTGCCTCTCTCCTaGCTCCATTCCCGATACGTG | + |
|
Preference number: 2 (lower is better) Translates to: YEHVGSFRWRRFLALVIFLLPLS*LHSRYV Trigger: CACGTATCGGGAATGGAGGCAGGAGAGAGGCAGGAG...GAAAATTACCAGGGCGAGGAAGCGGCGCCACCGGAAACTTCCTACGTGTTCGTA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000034076.16 ENSMUST00000169693.2 |
||
| 3UTR-3UTR CCA 90 bp | CTCGATTACTGCGACTGGCTTGGGGAAGGCGAGATTAATTTTGGAAACGGGAGTGTAGGAAGTTTCCGGTaGCGCCGCTTCCTCGCCCTG | + |
|
Preference number: 2 (lower is better) Translates to: LDYCDWLGEGEINFGNGSVGSFR*RRFLAL Trigger: CAGGGCGAGGAAGCGGCGCCACCGGAAACTTCCTAC...ACTCCCGTTTCCAAAATTAATCTCGCCTTCCCCAAGCCAGTCGCAGTAATCGAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000034076.16 ENSMUST00000169693.2 |
||
| 3UTR CAA 90 bp | TTGCACATTATGTTTCGGTACAATCAAAACTTCTGGACGAACCCCTaGAAAGTCCTGCGAATGAGCGCAATCGCGAGTCCGGCCGCCCGG | + |
|
Preference number: 2 (lower is better) Translates to: LHIMFRYNQNFWTNP*KVLRMSAIASPAAR Trigger: CCGGGCGGCCGGACTCGCGATTGCGCTCATTCGCAGGACTTTCAAGGGGTTCGTCCAGAAGTTTTGATTGTACCGAAACATAATGTGCAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000034076.16 |
||
| 3UTR-3UTR CCA 90 bp | CTTAGATTTCACGATCACTCCGAACAGGACAGAAATACGGAATACAGCCAGCGTGTAGGAAGTTTCCGGTaGCGCCGCTTCCTCGCCCTG | + |
|
Preference number: 2 (lower is better) Translates to: LRFHDHSEQDRNTEYSQRVGSFR*RRFLAL Trigger: CAGGGCGAGGAAGCGGCGCCACCGGAAACTTCCTAC...ACGCTGGCTGTATTCCGTATTTCTGTCCTGTTCGGAGTGATCGTGAAATCTAAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000034076.16 ENSMUST00000169693.2 |
||
| 3UTR-3UTR GCA 90 bp | ACCTCCTTGGCGGTTGGTGGAGCCACAGAACACGGGGCATTGACAAGCATCAGATTGGAAACGGGAGTGTaGAGAGCTAAGCGAAATTTA | + |
|
Preference number: 2 (lower is better) Translates to: TSLAVGGATEHGALTSIRLETGV*RAKRNL Trigger: TAAATTTCGCTTAGCTCTGCACACTCCCGTTTCCAA...TCTGATGCTTGTCAATGCCCCGTGTTCTGTGGCTCCACCAACCGCCAAGGAGGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000034076.16 ENSMUST00000169693.2 |
||
| 3UTR-3UTR GCA 90 bp | CGCGTTCAACACAGGGTCAGCGTTCCAGACTTAAAACGAAGTCGTTTATTTCAAGCCCTGGCCTCTCCTTaGAGCTTCCAAGTCTCTTGC | + |
|
Preference number: 2 (lower is better) Translates to: RVQHRVSVPDLKRSRLFQALASP*SFQVSC Trigger: GCAAGAGACTTGGAAGCTGCAAGGAGAGGCCAGGGC...TTGAAATAAACGACTTCGTTTTAAGTCTGGAACGCTGACCCTGTGTTGAACGCG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034076.16 |
||
| 3UTR-3UTR GCA 90 bp | CGCGTTCAACACAGGGTCAGCGTTCCAGACTTAAAACGAAGTCGTTTATTTCAAGCGCAGAAATGGCTCTaGGAAGAAGGCCTTGTGCCC | + |
|
Preference number: 2 (lower is better) Translates to: RVQHRVSVPDLKRSRLFQAQKWL*EEGLVP Trigger: GGGCACAAGGCCTTCTTCGCAGAGCCATTTCTGCGC...TTGAAATAAACGACTTCGTTTTAAGTCTGGAACGCTGACCCTGTGTTGAACGCG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034076.16 |
||
| 3UTR-3UTR CCA 90 bp | TATTCACACGTATGTTACAGAGGAAGAAGAAGCGTCCCGAAGAACCTCCTTGGCCAGCCAGCGTCCACCTaGAAGAGTTCTTCGTGTACA | + |
|
Preference number: 2 (lower is better) Translates to: YSHVCYRGRRSVPKNLLGQPAST*KSSSCT Trigger: TGTACACGAAGAACTCTTCCAGGTGGACGCTGGCTG...GCCAAGGAGGTTCTTCGGGACGCTTCTTCTTCCTCTGTAACATACGTGTGAATA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000034076.16 ENSMUST00000169693.2 |
||
| 3UTR-3UTR TCA 90 bp | CTTAGATTTCACGATCACTCCGAACAGGACAGAAATACGGAATACAGCCAGCGTCAGTCACCACGAAGGTaGGTCTTTCCTTCGCTAACA | + |
|
Preference number: 2 (lower is better) Translates to: LRFHDHSEQDRNTEYSQRQSPRR*VFPSLT Trigger: TGTTAGCGAAGGAAAGACTCACCTTCGTGGTGACTG...ACGCTGGCTGTATTCCGTATTTCTGTCCTGTTCGGAGTGATCGTGAAATCTAAG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000034076.16 ENSMUST00000169693.2 |
||
| 3UTR-3UTR GCA 90 bp | CTCAACCTCGCAACCCGGAAAAGGCGAAGTTTAGAAAGCTGTTTCAGAAAAATACTCTTCCTCGATTACTaGGACTGGCTTGGGGAAGGC | + |
|
Preference number: 2 (lower is better) Translates to: LNLATRKRRSLESCFRKILFLDY*DWLGEG Trigger: GCCTTCCCCAAGCCAGTCGCAGTAATCGAGGAAGAG...TATTTTTCTGAAACAGCTTTCTAAACTTCGCCTTTTCCGGGTTGCGAGGTTGAG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000034076.16 ENSMUST00000169693.2 |
||
| 3UTR-3UTR GCA 90 bp | GTCACCCGCGTTCAACACAGGGTCAGCGTTCCAGACTTAAAACGAAGTCGTTTATTGGAAACGGGAGTGTaGAGAGCTAAGCGAAATTTA | + |
|
Preference number: 2 (lower is better) Translates to: VTRVQHRVSVPDLKRSRLLETGV*RAKRNL Trigger: TAAATTTCGCTTAGCTCTGCACACTCCCGTTTCCAA...TAAACGACTTCGTTTTAAGTCTGGAACGCTGACCCTGTGTTGAACGCGGGTGAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034076.16 |
||
| 3UTR-3UTR CCA 90 bp | CTCAACCTCGCAACCCGGAAAAGGCGAAGTTTAGAAAGCTGTTTCAGAAAAATACAGCCAGCGTCCACCTaGAAGAGTTCTTCGTGTACA | + |
|
Preference number: 2 (lower is better) Translates to: LNLATRKRRSLESCFRKIQPAST*KSSSCT Trigger: TGTACACGAAGAACTCTTCCAGGTGGACGCTGGCTG...TATTTTTCTGAAACAGCTTTCTAAACTTCGCCTTTTCCGGGTTGCGAGGTTGAG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000034076.16 ENSMUST00000169693.2 |
||
| 3UTR CAA 90 bp | TCTTCCTCGATTACTGCGACTGGCTTGGGGAAGGCGAGATTAATTTaGGAAACGGGAGTGTGCAGAGCTAAGCGAAATTTACTTCTCTTA | + |
|
Preference number: 2 (lower is better) Translates to: SSSITATGLGKARLI*ETGVCRAKRNLLLL Trigger: TAAGAGAAGTAAATTTCGCTTAGCTCTGCACACTCCCGTTTCCAAAATTAATCTCGCCTTCCCCAAGCCAGTCGCAGTAATCGAGGAAGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000034076.16 ENSMUST00000169693.2 |
||
| 3UTR-3UTR TCA 90 bp | CGCGTTCAACACAGGGTCAGCGTTCCAGACTTAAAACGAAGTCGTTTATTTCAACAGAACACGGGGCATTaGCAAGCATCAGAGAACAAA | + |
|
Preference number: 2 (lower is better) Translates to: RVQHRVSVPDLKRSRLFQQNTGH*QASENK Trigger: TTTGTTCTCTGATGCTTGTCAATGCCCCGTGTTCTG...TTGAAATAAACGACTTCGTTTTAAGTCTGGAACGCTGACCCTGTGTTGAACGCG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000034076.16 |
||
| 3UTR CAA 90 bp | CAGGGTCAGCGTTCCAGACTTAAAACGAAGTCGTTTATTTCAATTTaGCTTTGCACATTATGTTTCGGTACAATCAAAACTTCTGGACGA | + |
|
Preference number: 2 (lower is better) Translates to: QGQRSRLKTKSFISI*LCTLCFGTIKTSGR Trigger: TCGTCCAGAAGTTTTGATTGTACCGAAACATAATGTGCAAAGCAAAATTGAAATAAACGACTTCGTTTTAAGTCTGGAACGCTGACCCTG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000034076.16 |
||
| 3UTR GCA 72 bp | GGAGAAGGGCTCAGGACCACCAGCGCCCACCCGGGCTaGGTATCTCGGTCTTGGACCCTCCGCTTCCTCCCG | + |
|
Preference number: 3 (lower is better) Translates to: GEGLRTTSAHPG*VSRSWTLRFLP Trigger: CGGGAGGAAGCGGAGGGTCCAAGACCGAGATACGCAGCCCGGGTGGGCGCTGGTGGTCCTGAGCCCTTCTCC 69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034076.16 |
||
| 3UTR GCA 72 bp | ACCTCGGGTTCAGAGGCGCTGGTACAAAGTGTCAGGTaGTTCGGGCGCCGCGGAGCGGATAGAGCTGGAGAC | + |
|
Preference number: 3 (lower is better) Translates to: TSGSEALVQSVR*FGRRGADRAGD Trigger: GTCTCCAGCTCTATCCGCTCCGCGGCGCCCGAAGCACCTGACACTTTGTACCAGCGCCTCTGAACCCGAGGT 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034076.16 |
||
| 3UTR CCA 72 bp | GGCAAAGGGAGCCTGCTGCGGGAGACAGCGCAGAAATaGCTCTGCGAAGAAGGCCTTGTGCCCTGGCCTCTC | + |
|
Preference number: 3 (lower is better) Translates to: GKGSLLRETAQK*LCEEGLVPWPL Trigger: GAGAGGCCAGGGCACAAGGCCTTCTTCGCAGAGCCATTTCTGCGCTGTCTCCCGCAGCAGGCTCCCTTTGCC 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000034076.16 ENSMUST00000169693.2 |
||
| 3UTR CCA 72 bp | GTTTGTTTGGCGGGTGGACCTCGGGTTCAGAGGCGCTaGTACAAAGTGTCAGGTGCTTCGGGCGCCGCGGAG | + |
|
Preference number: 3 (lower is better) Translates to: VCLAGGPRVQRR*YKVSGASGAAE Trigger: CTCCGCGGCGCCCGAAGCACCTGACACTTTGTACCAGCGCCTCTGAACCCGAGGTCCACCCGCCAAACAAAC 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034076.16 |
||
| 3UTR GCA 72 bp | GCTCTGCGAAGAAGGCCTTGTGCCCTGGCCTCTCCTTaGAGCTTCCAAGTCTCTTGCTTCTCCGCCCGCCTC | + |
|
Preference number: 3 (lower is better) Translates to: ALRRRPCALASP*SFQVSCFSARL Trigger: GAGGCGGGCGGAGAAGCAAGAGACTTGGAAGCTGCAAGGAGAGGCCAGGGCACAAGGCCTTCTTCGCAGAGC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000034076.16 ENSMUST00000169693.2 |
||
| 3UTR GCA 72 bp | TGTGCCCTGGCCTCTCCTTGCAGCTTCCAAGTCTCTTaGTTCTCCGCCCGCCTCAACCTCGCAACCCGGAAA | + |
|
Preference number: 3 (lower is better) Translates to: CALASPCSFQVS*FSARLNLATRK Trigger: TTTCCGGGTTGCGAGGTTGAGGCGGGCGGAGAAGCAAGAGACTTGGAAGCTGCAAGGAGAGGCCAGGGCACA 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000034076.16 ENSMUST00000169693.2 |
||
| 3UTR-3UTR CAA 90 bp | ACCCTGGAGAAGGGCTCAGGACCACCAGCGCCCACCCGGGCTGCGTATCTCGGTCTGATGCATTTGGAATaGAGGGTGAGCAAGAAACTG | + |
|
Preference number: 3 (lower is better) Translates to: TLEKGSGPPAPTRAAYLGLMHLE*RVSKKL Trigger: CAGTTTCTTGCTCACCCTCAATTCCAAATGCATCAG...ACCGAGATACGCAGCCCGGGTGGGCGCTGGTGGTCCTGAGCCCTTCTCCAGGGT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034076.16 |
||
| 3UTR CCA 72 bp | ACCCAGTGTAGCTACGAACACGTAGGAAGTTTCCGGTaGCGCCGCTTCCTCGCCCTGGTAATTTTCGGCCTC | + |
|
Preference number: 3 (lower is better) Translates to: TQCSYEHVGSFR*RRFLALVIFGL Trigger: GAGGCCGAAAATTACCAGGGCGAGGAAGCGGCGCCACCGGAAACTTCCTACGTGTTCGTAGCTACACTGGGT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000034076.16 ENSMUST00000169693.2 |
||
| 3UTR GCA 72 bp | AGACAGCGCAGAAATGGCTCTGCGAAGAAGGCCTTGTaGCCTGGCCTCTCCTTGCAGCTTCCAAGTCTCTTG | + |
|
Preference number: 3 (lower is better) Translates to: RQRRNGSAKKAL*PGLSLQLPSLL Trigger: CAAGAGACTTGGAAGCTGCAAGGAGAGGCCAGGGCACAAGGCCTTCTTCGCAGAGCCATTTCTGCGCTGTCT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000034076.16 ENSMUST00000169693.2 |
||
| 3UTR CCA 72 bp | AGAAGAAGCGTCCCGAAGAACCTCCTTGGCGGTTGGTaGAGCCACAGAACACGGGGCATTGACAAGCATCAG | + |
|
Preference number: 3 (lower is better) Translates to: RRSVPKNLLGGW*SHRTRGIDKHQ Trigger: CTGATGCTTGTCAATGCCCCGTGTTCTGTGGCTCCACCAACCGCCAAGGAGGTTCTTCGGGACGCTTCTTCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000034076.16 ENSMUST00000169693.2 |
||
| 3UTR-3UTR CAA 90 bp | CGGGTTCGAGTACTAGGATTGGGAATAATTCCTGATGCATTTGGAATTGAGGGTCAGCTTCCAAGTCTCTaGCTTCTCCGCCCGCCTCAA | + |
|
Preference number: 3 (lower is better) Translates to: RVRVLGLGIIPDAFGIEGQLPSL*LLRPPQ Trigger: TTGAGGCGGGCGGAGAAGCAAGAGACTTGGAAGCTG...ACCCTCAATTCCAAATGCATCAGGAATTATTCCCAATCCTAGTACTCGAACCCG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034076.16 |
||
| 3UTR CCA 72 bp | AATGACAAGGCAAGTCTCTTCCTCGATTACTGCGACTaGCTTGGGGAAGGCGAGATTAATTTTGGAAACGGG | + |
|
Preference number: 3 (lower is better) Translates to: NDKASLFLDYCD*LGEGEINFGNG Trigger: CCCGTTTCCAAAATTAATCTCGCCTTCCCCAAGCCAGTCGCAGTAATCGAGGAAGAGACTTGCCTTGTCATT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000034076.16 ENSMUST00000169693.2 |
||
| 3UTR CCA 72 bp | GCTTTGCACATTATGTTTCGGTACAATCAAAACTTCTaGACGAACCCCTTGAAAGTCCTGCGAATGAGCGCA | + |
|
Preference number: 3 (lower is better) Translates to: ALHIMFRYNQNF*TNPLKVLRMSA Trigger: TGCGCTCATTCGCAGGACTTTCAAGGGGTTCGTCCAGAAGTTTTGATTGTACCGAAACATAATGTGCAAAGC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000034076.16 |
||
| 3UTR CCA 72 bp | ACAGGACAGAAATACGGAATACAGCCAGCGTCCACCTaGAAGAGTTCTTCGTGTACAAATGATACATATACA | + |
|
Preference number: 3 (lower is better) Translates to: TGQKYGIQPAST*KSSSCTNDTYT Trigger: TGTATATGTATCATTTGTACACGAAGAACTCTTCCAGGTGGACGCTGGCTGTATTCCGTATTTCTGTCCTGT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000034076.16 ENSMUST00000169693.2 |
||
| 3UTR CAA 72 bp | GACCACCAGCGCCCACCCGGGCTGCGTATCTCGGTCTaGGACCCTCCGCTTCCTCCCGCTTCTGGCGTTGCG | + |
|
Preference number: 4 (lower is better) Translates to: DHQRPPGLRISV*DPPLPPASGVA Trigger: CGCAACGCCAGAAGCGGGAGGAAGCGGAGGGTCCAAGACCGAGATACGCAGCCCGGGTGGGCGCTGGTGGTC 69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034076.16 |
||
| 3UTR CAA 72 bp | GCGAATGAGCGCAATCGCGAGTCCGGCCGCCCGGGTTaGTTTGGCGGGTGGACCTCGGGTTCAGAGGCGCTG | + |
|
Preference number: 4 (lower is better) Translates to: ANERNRESGRPG*FGGWTSGSEAL Trigger: CAGCGCCTCTGAACCCGAGGTCCACCCGCCAAACAAACCCGGGCGGCCGGACTCGCGATTGCGCTCATTCGC 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034076.16 |
||
| CDS-3UTR GCA 90 bp | GCCGGCGGCGCGCACCTTGGTACCCAGTGTAGCTACGAACACGTAGGAAGTTTCCCCGCGGGCTGGGCCTaGCAGCCACGCAGTCCCCAA | + |
|
Preference number: 4 (lower is better) Translates to: AGGAHLGTQCSYEHVGSFPAGWA*QPRSPQ Trigger: TTGGGGACTGCGTGGCTGGCAGGCCCAGCCCGCGGG...GAAACTTCCTACGTGTTCGTAGCTACACTGGGTACCAAGGTGCGCGCCGCCGGC 67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000034076.16 ENSMUST00000169693.2 |
||
| 3UTR CAA 72 bp | ATGAGCGCAATCGCGAGTCCGGCCGCCCGGGTTTGTTaGGCGGGTGGACCTCGGGTTCAGAGGCGCTGGTAC | + |
|
Preference number: 4 (lower is better) Translates to: MSAIASPAARVC*AGGPRVQRRWY Trigger: GTACCAGCGCCTCTGAACCCGAGGTCCACCCGCCAAACAAACCCGGGCGGCCGGACTCGCGATTGCGCTCAT 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034076.16 |
||
| 3UTR CAA 72 bp | TTGTGCCCTGGCCTCTCCTTGCAGCTTCCAAGTCTCTaGCTTCTCCGCCCGCCTCAACCTCGCAACCCGGAA | + |
|
Preference number: 4 (lower is better) Translates to: LCPGLSLQLPSL*LLRPPQPRNPE Trigger: TTCCGGGTTGCGAGGTTGAGGCGGGCGGAGAAGCAAGAGACTTGGAAGCTGCAAGGAGAGGCCAGGGCACAA 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000034076.16 ENSMUST00000169693.2 |
||
| CDS-3UTR TCA 90 bp | TGGCCTCTCCTTGCAGCTTCCAAGTCTCTTGCTTCTCCGCCCGCCTCAACCTCGCTTTGCGCGGGGCGATaGAAGTGCTGCGTTCTGAGT | + |
|
Preference number: 4 (lower is better) Translates to: WPLLAASKSLASPPASTSLCAGR*KCCVLS Trigger: ACTCAGAACGCAGCACTTTCATCGCCCCGCGCAAAG...CGAGGTTGAGGCGGGCGGAGAAGCAAGAGACTTGGAAGCTGCAAGGAGAGGCCA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000034076.16 ENSMUST00000169693.2 |
||
| CDS-3UTR TCA 90 bp | CTCTCCTTGCAGCTTCCAAGTCTCTTGCTTCTCCGCCCGCCTCAACCTCGCAACCTTTCTCCATCTGGATaGGGACGCCGTTGCTGGCGG | + |
|
Preference number: 4 (lower is better) Translates to: LSLQLPSLLLLRPPQPRNLSPSG*GRRCWR Trigger: CCGCCAGCAACGGCGTCCTCATCCAGATGGAGAAAG...GTTGCGAGGTTGAGGCGGGCGGAGAAGCAAGAGACTTGGAAGCTGCAAGGAGAG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000034076.16 ENSMUST00000169693.2 |
||
| CDS-3UTR TCA 90 bp | ACCTCCTTGGCGGTTGGTGGAGCCACAGAACACGGGGCATTGACAAGCATCAGATCCCCCGCTCCAGCTTaGGGTATGCTCGGTCGCCTT | + |
|
Preference number: 4 (lower is better) Translates to: TSLAVGGATEHGALTSIRSPAPA*GMLGRL Trigger: AAGGCGACCGAGCATACCTCAAGCTGGAGCGGGGGA...TCTGATGCTTGTCAATGCCCCGTGTTCTGTGGCTCCACCAACCGCCAAGGAGGT 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000034076.16 ENSMUST00000169693.2 |
||
| CDS-3UTR GCA 90 bp | GACGAAGTTGGACCGCCGGCGGCGCGCACCTTGGTACCCAGTGTAGCTACGAACCTCCAGCTTGAGGTATaGTCGGTCGCCTTTCTCCAT | + |
|
Preference number: 4 (lower is better) Translates to: DEVGPPAARTLVPSVATNLQLEV*SVAFLH Trigger: ATGGAGAAAGGCGACCGAGCATACCTCAAGCTGGAG...GTTCGTAGCTACACTGGGTACCAAGGTGCGCGCCGCCGGCGGTCCAACTTCGTC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000034076.16 ENSMUST00000169693.2 |
||
| 3UTR CAA 72 bp | GGGAGACAGCGCAGAAATGGCTCTGCGAAGAAGGCCTaGTGCCCTGGCCTCTCCTTGCAGCTTCCAAGTCTC | + |
|
Preference number: 4 (lower is better) Translates to: GRQRRNGSAKKA*CPGLSLQLPSL Trigger: GAGACTTGGAAGCTGCAAGGAGAGGCCAGGGCACAAGGCCTTCTTCGCAGAGCCATTTCTGCGCTGTCTCCC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000034076.16 ENSMUST00000169693.2 |
||
| CDS-3UTR TCA 90 bp | TGGAGACATCCAAGGAAAGTAGGCGTGAAGACAGTCACGCGGGGCAGGCGGGTTCTTTGCGCGGGGCGATaGAAGTGCTGCGTTCTGAGT | + |
|
Preference number: 4 (lower is better) Translates to: WRHPRKVGVKTVTRGRRVLCAGR*KCCVLS Trigger: ACTCAGAACGCAGCACTTTCATCGCCCCGCGCAAAG...AACCCGCCTGCCCCGCGTGACTGTCTTCACGCCTACTTTCCTTGGATGTCTCCA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000034076.16 |
||
| CDS-3UTR TCA 90 bp | TACGAACACGTAGGAAGTTTCCGGTGGCGCCGCTTCCTCGCCCTGGTAATTTTCGTCACCGGCGAAGGCTaGAATCACCGGCCACCCGTT | + |
|
Preference number: 4 (lower is better) Translates to: YEHVGSFRWRRFLALVIFVTGEG*NHRPPV Trigger: AACGGGTGGCCGGTGATTTCAGCCTTCGCCGGTGAC...GAAAATTACCAGGGCGAGGAAGCGGCGCCACCGGAAACTTCCTACGTGTTCGTA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000034076.16 ENSMUST00000169693.2 |
||
| CDS-3UTR GCA 90 bp | TATTCACACGTATGTTACAGAGGAAGAAGAAGCGTCCCGAAGAACCTCCTTGGCCCCGCGGGCTGGGCCTaGCAGCCACGCAGTCCCCAA | + |
|
Preference number: 4 (lower is better) Translates to: YSHVCYRGRRSVPKNLLGPAGWA*QPRSPQ Trigger: TTGGGGACTGCGTGGCTGGCAGGCCCAGCCCGCGGG...GCCAAGGAGGTTCTTCGGGACGCTTCTTCTTCCTCTGTAACATACGTGTGAATA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000034076.16 ENSMUST00000169693.2 |
||
| CDS-3UTR CCA 90 bp | TGGCCTCTCCTTGCAGCTTCCAAGTCTCTTGCTTCTCCGCCCGCCTCAACCTCGTGCCCTCCAGTACGATaGGCTCTGTCTCATTCTGCC | + |
|
Preference number: 4 (lower is better) Translates to: WPLLAASKSLASPPASTSCPPVR*ALSHSA Trigger: GGCAGAATGAGACAGAGCCCATCGTACTGGAGGGCA...CGAGGTTGAGGCGGGCGGAGAAGCAAGAGACTTGGAAGCTGCAAGGAGAGGCCA 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000034076.16 ENSMUST00000169693.2 |
||
| CDS-3UTR CCA 90 bp | ACCTCCTTGGCGGTTGGTGGAGCCACAGAACACGGGGCATTGACAAGCATCAGAGGTCAGACGTGGGGTTaGAGTCACACACCACCAGGC | + |
|
Preference number: 4 (lower is better) Translates to: TSLAVGGATEHGALTSIRGQTWG*SHTPPG Trigger: GCCTGGTGGTGTGTGACTCCAACCCCACGTCTGACC...TCTGATGCTTGTCAATGCCCCGTGTTCTGTGGCTCCACCAACCGCCAAGGAGGT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000034076.16 ENSMUST00000169693.2 |
||
| CDS-3UTR TCA 90 bp | GGACGAAGTTGGACCGCCGGCGGCGCGCACCTTGGTACCCAGTGTAGCTACGAAGAAAGTGCTGCGTTCTaGGTCAAAGTTGTTCCCGAT | + |
|
Preference number: 4 (lower is better) Translates to: GRSWTAGGAHLGTQCSYEESAAF*VKVVPD Trigger: ATCGGGAACAACTTTGACTCAGAACGCAGCACTTTC...TTCGTAGCTACACTGGGTACCAAGGTGCGCGCCGCCGGCGGTCCAACTTCGTCC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000034076.16 ENSMUST00000169693.2 |
||
| CDS-3UTR TCA 90 bp | TACGAACACGTAGGAAGTTTCCGGTGGCGCCGCTTCCTCGCCCTGGTAATTTTCCTTTCTCCATCTGGATaGGGACGCCGTTGCTGGCGG | + |
|
Preference number: 4 (lower is better) Translates to: YEHVGSFRWRRFLALVIFLSPSG*GRRCWR Trigger: CCGCCAGCAACGGCGTCCTCATCCAGATGGAGAAAG...GAAAATTACCAGGGCGAGGAAGCGGCGCCACCGGAAACTTCCTACGTGTTCGTA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000034076.16 ENSMUST00000169693.2 |
||
| CDS-3UTR TCA 90 bp | GCGACTGGCTTGGGGAAGGCGAGATTAATTTTGGAAACGGGAGTGTGCAGAGCTTCCCCCGCTCCAGCTTaGGGTATGCTCGGTCGCCTT | + |
|
Preference number: 4 (lower is better) Translates to: ATGLGKARLILETGVCRASPAPA*GMLGRL Trigger: AAGGCGACCGAGCATACCTCAAGCTGGAGCGGGGGA...AGCTCTGCACACTCCCGTTTCCAAAATTAATCTCGCCTTCCCCAAGCCAGTCGC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000034076.16 ENSMUST00000169693.2 |
||
| 3UTR CAA 72 bp | CGAAATTTACTTCTCTTAGTAAGGGAGCGGACGAAGTaGGACCGCCGGCGGCGCGCACCTTGGTACCCAGTG | + |
|
Preference number: 4 (lower is better) Translates to: RNLLLLVRERTK*DRRRRAPWYPV Trigger: CACTGGGTACCAAGGTGCGCGCCGCCGGCGGTCCAACTTCGTCCGCTCCCTTACTAAGAGAAGTAAATTTCG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000034076.16 ENSMUST00000169693.2 |
||
| CDS-3UTR CCA 90 bp | GCGACTGGCTTGGGGAAGGCGAGATTAATTTTGGAAACGGGAGTGTGCAGAGCTTCGCGTGTCACGTCTTaGTCACCGGCGAAGGCTGAA | + |
|
Preference number: 4 (lower is better) Translates to: ATGLGKARLILETGVCRASRVTS*SPAKAE Trigger: TTCAGCCTTCGCCGGTGACCAAGACGTGACACGCGA...AGCTCTGCACACTCCCGTTTCCAAAATTAATCTCGCCTTCCCCAAGCCAGTCGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000034076.16 ENSMUST00000169693.2 |
||
| CDS-3UTR CCA 90 bp | GCGACTGGCTTGGGGAAGGCGAGATTAATTTTGGAAACGGGAGTGTGCAGAGCTTGCCCTCCAGTACGATaGGCTCTGTCTCATTCTGCC | + |
|
Preference number: 4 (lower is better) Translates to: ATGLGKARLILETGVCRACPPVR*ALSHSA Trigger: GGCAGAATGAGACAGAGCCCATCGTACTGGAGGGCA...AGCTCTGCACACTCCCGTTTCCAAAATTAATCTCGCCTTCCCCAAGCCAGTCGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000034076.16 ENSMUST00000169693.2 |
||
| CDS-3UTR CCA 90 bp | CTTAGATTTCACGATCACTCCGAACAGGACAGAAATACGGAATACAGCCAGCGTGGTCAGACGTGGGGTTaGAGTCACACACCACCAGGC | + |
|
Preference number: 4 (lower is better) Translates to: LRFHDHSEQDRNTEYSQRGQTWG*SHTPPG Trigger: GCCTGGTGGTGTGTGACTCCAACCCCACGTCTGACC...ACGCTGGCTGTATTCCGTATTTCTGTCCTGTTCGGAGTGATCGTGAAATCTAAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000034076.16 ENSMUST00000169693.2 |
||
| 3UTR CAA 72 bp | ACAAGGCAAGTCTCTTCCTCGATTACTGCGACTGGCTaGGGGAAGGCGAGATTAATTTTGGAAACGGGAGTG | + |
|
Preference number: 4 (lower is better) Translates to: TRQVSSSITATG*GKARLILETGV Trigger: CACTCCCGTTTCCAAAATTAATCTCGCCTTCCCCAAGCCAGTCGCAGTAATCGAGGAAGAGACTTGCCTTGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000034076.16 ENSMUST00000169693.2 |
||
| 3UTR CAA 72 bp | ATGTTTCGGTACAATCAAAACTTCTGGACGAACCCCTaGAAAGTCCTGCGAATGAGCGCAATCGCGAGTCCG | + |
|
Preference number: 4 (lower is better) Translates to: MFRYNQNFWTNP*KVLRMSAIASP Trigger: CGGACTCGCGATTGCGCTCATTCGCAGGACTTTCAAGGGGTTCGTCCAGAAGTTTTGATTGTACCGAAACAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000034076.16 |
||
| CDS-3UTR TCA 90 bp | AAACCAGTCACCACGAAGGTGAGTCTTTCCTTCGCTAACAAGCGGGGACGAATTGAAAGTGCTGCGTTCTaGGTCAAAGTTGTTCCCGAT | + |
|
Preference number: 4 (lower is better) Translates to: KPVTTKVSLSFANKRGRIESAAF*VKVVPD Trigger: ATCGGGAACAACTTTGACTCAGAACGCAGCACTTTC...AATTCGTCCCCGCTTGTTAGCGAAGGAAAGACTCACCTTCGTGGTGACTGGTTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000034076.16 ENSMUST00000169693.2 |
||
| CDS-3UTR GCA 90 bp | CTTAGATTTCACGATCACTCCGAACAGGACAGAAATACGGAATACAGCCAGCGTCTCCAGCTTGAGGTATaGTCGGTCGCCTTTCTCCAT | + |
|
Preference number: 4 (lower is better) Translates to: LRFHDHSEQDRNTEYSQRLQLEV*SVAFLH Trigger: ATGGAGAAAGGCGACCGAGCATACCTCAAGCTGGAG...ACGCTGGCTGTATTCCGTATTTCTGTCCTGTTCGGAGTGATCGTGAAATCTAAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000034076.16 ENSMUST00000169693.2 |
||
| 3UTR CAA 72 bp | ATTACTGCGACTGGCTTGGGGAAGGCGAGATTAATTTaGGAAACGGGAGTGTGCAGAGCTAAGCGAAATTTA | + |
|
Preference number: 4 (lower is better) Translates to: ITATGLGKARLI*ETGVCRAKRNL Trigger: TAAATTTCGCTTAGCTCTGCACACTCCCGTTTCCAAAATTAATCTCGCCTTCCCCAAGCCAGTCGCAGTAAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000034076.16 ENSMUST00000169693.2 |
||
| CDS CCA 90 bp | ATCTGGATGAGGACGCCGTTGCTGGCGGCCTCGCGTGTCACGTCTTaGTCACCGGCGAAGGCTGAAATCACCGGCCACCCGTTCAACATG | + |
|
Preference number: 5 (lower is better) Translates to: IWMRTPLLAASRVTS*SPAKAEITGHPFNM Trigger: CATGTTGAACGGGTGGCCGGTGATTTCAGCCTTCGCCGGTGACCAAGACGTGACACGCGAGGCCGCCAGCAACGGCGTCCTCATCCAGAT 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000034076.16 ENSMUST00000169693.2 |
||
| CDS-3UTR CAA 90 bp | AAGCAGGGGACACAGGAAAGGCAAAGGGAGCCTGCTGCGGGAGACAGCGCAGAAGGGTCAGACGTGGGGTaGGAGTCACACACCACCAGG | + |
|
Preference number: 5 (lower is better) Translates to: KQGTQERQREPAAGDSAEGSDVG*ESHTTR Trigger: CCTGGTGGTGTGTGACTCCAACCCCACGTCTGACCC...TTCTGCGCTGTCTCCCGCAGCAGGCTCCCTTTGCCTTTCCTGTGTCCCCTGCTT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000034076.16 ENSMUST00000169693.2 |
||
| CDS-3UTR CAA 90 bp | GCAGGGGACACAGGAAAGGCAAAGGGAGCCTGCTGCGGGAGACAGCGCAGAAATGGGTCAGACGTGGGGTaGGAGTCACACACCACCAGG | + |
|
Preference number: 5 (lower is better) Translates to: AGDTGKAKGACCGRQRRNGSDVG*ESHTTR Trigger: CCTGGTGGTGTGTGACTCCAACCCCACGTCTGACCC...ATTTCTGCGCTGTCTCCCGCAGCAGGCTCCCTTTGCCTTTCCTGTGTCCCCTGC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000034076.16 ENSMUST00000169693.2 |
||
| CDS-3UTR CAA 90 bp | ACCTCCTTGGCGGTTGGTGGAGCCACAGAACACGGGGCATTGACAAGCATCAGATGGATGAGGACGCCGTaGCTGGCGGCCTCGCGTGTC | + |
|
Preference number: 5 (lower is better) Translates to: TSLAVGGATEHGALTSIRWMRTP*LAASRV Trigger: GACACGCGAGGCCGCCAGCAACGGCGTCCTCATCCA...TCTGATGCTTGTCAATGCCCCGTGTTCTGTGGCTCCACCAACCGCCAAGGAGGT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000034076.16 ENSMUST00000169693.2 |
||
| CDS-3UTR CAA 90 bp | TGGCCTCTCCTTGCAGCTTCCAAGTCTCTTGCTTCTCCGCCCGCCTCAACCTCGTTCCCCCGCTCCAGCTaGAGGTATGCTCGGTCGCCT | + |
|
Preference number: 5 (lower is better) Translates to: WPLLAASKSLASPPASTSFPRSS*RYARSP Trigger: AGGCGACCGAGCATACCTCAAGCTGGAGCGGGGGAA...CGAGGTTGAGGCGGGCGGAGAAGCAAGAGACTTGGAAGCTGCAAGGAGAGGCCA 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000034076.16 ENSMUST00000169693.2 |
||
| CDS-3UTR CAA 90 bp | TCCGCCCGCCTCAACCTCGCAACCCGGAAAAGGCGAAGTTTAGAAAGCTGTTTCCGTTCTGAGTCAAAGTaGTTCCCGATGTTCACTAGT | + |
|
Preference number: 5 (lower is better) Translates to: SARLNLATRKRRSLESCFRSESK*FPMFTS Trigger: ACTAGTGAACATCGGGAACAACTTTGACTCAGAACG...GAAACAGCTTTCTAAACTTCGCCTTTTCCGGGTTGCGAGGTTGAGGCGGGCGGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000034076.16 ENSMUST00000169693.2 |
||
| CDS-3UTR CAA 90 bp | CTCAACCTCGCAACCCGGAAAAGGCGAAGTTTAGAAAGCTGTTTCAGAAAAATATTCCCCCGCTCCAGCTaGAGGTATGCTCGGTCGCCT | + |
|
Preference number: 5 (lower is better) Translates to: LNLATRKRRSLESCFRKIFPRSS*RYARSP Trigger: AGGCGACCGAGCATACCTCAAGCTGGAGCGGGGGAA...TATTTTTCTGAAACAGCTTTCTAAACTTCGCCTTTTCCGGGTTGCGAGGTTGAG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 2 transcripts: ENSMUST00000034076.16 ENSMUST00000169693.2 |
||
| CDS-3UTR CAA 90 bp | CGCGTTCAACACAGGGTCAGCGTTCCAGACTTAAAACGAAGTCGTTTATTTCAACGTTCTGAGTCAAAGTaGTTCCCGATGTTCACTAGT | + |
|
Preference number: 5 (lower is better) Translates to: RVQHRVSVPDLKRSRLFQRSESK*FPMFTS Trigger: ACTAGTGAACATCGGGAACAACTTTGACTCAGAACG...TTGAAATAAACGACTTCGTTTTAAGTCTGGAACGCTGACCCTGTGTTGAACGCG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034076.16 |
||
| CDS GCA 72 bp | GATGGGCTCTGTCTCATTCTGCCCGCGGGCTGGGCCTaGCAGCCACGCAGTCCCCAACAGCAGCAGCTCCAC | + |
|
Preference number: 6 (lower is better) Translates to: DGLCLILPAGWA*QPRSPQQQQLH Trigger: GTGGAGCTGCTGCTGTTGGGGACTGCGTGGCTGGCAGGCCCAGCCCGCGGGCAGAATGAGACAGAGCCCATC 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000034076.16 ENSMUST00000169693.2 |
||
| CDS CCA 72 bp | AGGACGCCGTTGCTGGCGGCCTCGCGTGTCACGTCTTaGTCACCGGCGAAGGCTGAAATCACCGGCCACCCG | + |
|
Preference number: 6 (lower is better) Translates to: RTPLLAASRVTS*SPAKAEITGHP Trigger: CGGGTGGCCGGTGATTTCAGCCTTCGCCGGTGACCAAGACGTGACACGCGAGGCCGCCAGCAACGGCGTCCT 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000034076.16 ENSMUST00000169693.2 |
||
| CDS CCA 72 bp | CAGTACGATGGGCTCTGTCTCATTCTGCCCGCGGGCTaGGCCTGCCAGCCACGCAGTCCCCAACAGCAGCAG | + |
|
Preference number: 6 (lower is better) Translates to: QYDGLCLILPAG*ACQPRSPQQQQ Trigger: CTGCTGCTGTTGGGGACTGCGTGGCTGGCAGGCCCAGCCCGCGGGCAGAATGAGACAGAGCCCATCGTACTG 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000034076.16 ENSMUST00000169693.2 |
||
| CDS TCA 72 bp | GGCCTCGCGTGTCACGTCTTGGTCACCGGCGAAGGCTaGAATCACCGGCCACCCGTTCAACATGAGGCTCAC | + |
|
Preference number: 6 (lower is better) Translates to: GLACHVLVTGEG*NHRPPVQHEAH Trigger: GTGAGCCTCATGTTGAACGGGTGGCCGGTGATTTCAGCCTTCGCCGGTGACCAAGACGTGACACGCGAGGCC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000034076.16 ENSMUST00000169693.2 |
||