Pregenerated sensors for CBLL1 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000020659Ensembl transcript IDs: ENSMUST00000064240.14, ENSMUST00000085487.12, ENSMUST00000101499.10, ENSMUST00000185739.8, ENSMUST00000188326.3
Found 228 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR-3UTR TCA 90 bp | TTAAAATTCTATTACAAAACATTCATCTGGCCTGCCTCCCAGCATAATGGTTTTGATCTGCAGCTGCTGTaGAAAGGCATCCGAGTGAAC | + |
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Preference number: 2 (lower is better) Translates to: LKFYYKTFIWPASQHNGFDLQLL*KGIRVN Trigger: GTTCACTCGGATGCCTTTTCACAGCAGCTGCAGATC...AAAACCATTATGCTGGGAGGCAGGCCAGATGAATGTTTTGTAATAGAATTTTAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000064240.14 ENSMUST00000101499.10 ENSMUST00000185739.8 |
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| 3UTR-3UTR TCA 90 bp | ATGATTTTGTATCTGATCATCCACCATGAGAATGTTTTCCTGTACCTGACAGAACAGAAAAAGCGTCAATaGGAACAGCACTCACTGGCA | + |
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Preference number: 2 (lower is better) Translates to: MILYLIIHHENVFLYLTEQKKRQ*EQHSLA Trigger: TGCCAGTGAGTGCTGTTCTCATTGACGCTTTTTCTG...TTCTGTCAGGTACAGGAAAACATTCTCATGGTGGATGATCAGATACAAAATCAT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000064240.14 ENSMUST00000101499.10 ENSMUST00000185739.8 |
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| 3UTR-3UTR TCA 90 bp | TTAAAATTCTATTACAAAACATTCATCTGGCCTGCCTCCCAGCATAATGGTTTTCAGAAAAAGCGTCAATaGGAACAGCACTCACTGGCA | + |
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Preference number: 2 (lower is better) Translates to: LKFYYKTFIWPASQHNGFQKKRQ*EQHSLA Trigger: TGCCAGTGAGTGCTGTTCTCATTGACGCTTTTTCTG...AAAACCATTATGCTGGGAGGCAGGCCAGATGAATGTTTTGTAATAGAATTTTAA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 3 transcripts: ENSMUST00000064240.14 ENSMUST00000101499.10 ENSMUST00000185739.8 |
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| 3UTR-3UTR CCA 90 bp | TTAAAATTCTATTACAAAACATTCATCTGGCCTGCCTCCCAGCATAATGGTTTTCAATTACACACTACCTaGAGACATGCCAGCCAAGCA | + |
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Preference number: 2 (lower is better) Translates to: LKFYYKTFIWPASQHNGFQLHTT*RHASQA Trigger: TGCTTGGCTGGCATGTCTCCAGGTAGTGTGTAATTG...AAAACCATTATGCTGGGAGGCAGGCCAGATGAATGTTTTGTAATAGAATTTTAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000064240.14 ENSMUST00000101499.10 ENSMUST00000185739.8 |
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| 3UTR-3UTR CCA 90 bp | ATGATTTTGTATCTGATCATCCACCATGAGAATGTTTTCCTGTACCTGACAGAAAGTGGTCATCTCCAATaGACTGTAACAAGCCCCTAT | + |
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Preference number: 2 (lower is better) Translates to: MILYLIIHHENVFLYLTESGHLQ*TVTSPY Trigger: ATAGGGGCTTGTTACAGTCCATTGGAGATGACCACT...TTCTGTCAGGTACAGGAAAACATTCTCATGGTGGATGATCAGATACAAAATCAT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000064240.14 ENSMUST00000101499.10 ENSMUST00000185739.8 |
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| 3UTR-3UTR TCA 90 bp | GACTCTAAAGGCACCTTACATGGCACTGAAATTCACAATCTAACCATGACTTTTTGTAGGTTAAGACAGTaGACAGAGAGCACATTTCAT | + |
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Preference number: 2 (lower is better) Translates to: DSKGTLHGTEIHNLTMTFCRLRQ*TESTFH Trigger: ATGAAATGTGCTCTCTGTTCACTGTCTTAACCTACA...AAAAGTCATGGTTAGATTGTGAATTTCAGTGCCATGTAAGGTGCCTTTAGAGTC 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000064240.14 ENSMUST00000101499.10 ENSMUST00000185739.8 |
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| 3UTR-3UTR TCA 90 bp | TTAAAATTCTATTACAAAACATTCATCTGGCCTGCCTCCCAGCATAATGGTTTTACTAGAAATAGTGCATaGGCAAACCAGATTCTCAAA | + |
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Preference number: 2 (lower is better) Translates to: LKFYYKTFIWPASQHNGFTRNSA*ANQILK Trigger: TTTGAGAATCTGGTTTGCTCATGCACTATTTCTAGT...AAAACCATTATGCTGGGAGGCAGGCCAGATGAATGTTTTGTAATAGAATTTTAA 36% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000064240.14 ENSMUST00000101499.10 ENSMUST00000185739.8 |
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| 3UTR CCA 72 bp | CCACTCAGAAAAAGCGTCAATGAGAACAGCACTCACTaGCAGCTTAGAGCCTGTAGAGCAGGTCGGTTTCCC | + |
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Preference number: 3 (lower is better) Translates to: PLRKSVNENSTH*QLRACRAGRFP Trigger: GGGAAACCGACCTGCTCTACAGGCTCTAAGCTGCCAGTGAGTGCTGTTCTCATTGACGCTTTTTCTGAGTGG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000064240.14 ENSMUST00000101499.10 ENSMUST00000185739.8 |
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| 3UTR TCA 72 bp | CTGATGATCTGCAGCTGCTGTGAAAAGGCATCCGAGTaGACCGTATTACAGAACTACACTTTGAACTTTCAG | + |
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Preference number: 3 (lower is better) Translates to: LMICSCCEKASE*TVLQNYTLNFQ Trigger: CTGAAAGTTCAAAGTGTAGTTCTGTAATACGGTTCACTCGGATGCCTTTTCACAGCAGCTGCAGATCATCAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000064240.14 ENSMUST00000101499.10 ENSMUST00000185739.8 |
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| 3UTR-3UTR CAA 90 bp | GACTCTAAAGGCACCTTACATGGCACTGAAATTCACAATCTAACCATGACTTTTTTACAGAACTACACTTaGAACTTTCAGTGCCTAAAG | + |
|
Preference number: 3 (lower is better) Translates to: DSKGTLHGTEIHNLTMTFLQNYT*NFQCLK Trigger: CTTTAGGCACTGAAAGTTCAAAGTGTAGTTCTGTAA...AAAAGTCATGGTTAGATTGTGAATTTCAGTGCCATGTAAGGTGCCTTTAGAGTC 38% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt. Matches the following 3 transcripts: ENSMUST00000064240.14 ENSMUST00000101499.10 ENSMUST00000185739.8 |
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| 3UTR-3UTR CAA 90 bp | TTAAAATTCTATTACAAAACATTCATCTGGCCTGCCTCCCAGCATAATGGTTTTTTACAGAACTACACTTaGAACTTTCAGTGCCTAAAG | + |
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Preference number: 3 (lower is better) Translates to: LKFYYKTFIWPASQHNGFLQNYT*NFQCLK Trigger: CTTTAGGCACTGAAAGTTCAAAGTGTAGTTCTGTAA...AAAACCATTATGCTGGGAGGCAGGCCAGATGAATGTTTTGTAATAGAATTTTAA 36% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt. Matches the following 3 transcripts: ENSMUST00000064240.14 ENSMUST00000101499.10 ENSMUST00000185739.8 |
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| CDS-3UTR TCA 90 bp | CTTGTGTTAATAGCTACCTCAAAAGAGGTAGTTTTCCTTCCACAGTCAAAGGTCTTGCGGGCATCCTGCTaGCAGTCCTTTGAGTCCGAG | + |
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Preference number: 4 (lower is better) Translates to: LVLIATSKEVVFLPQSKVLRASC*QSFESE Trigger: CTCGGACTCAAAGGACTGTCAGCAGGATGCCCGCAA...GACCTTTGACTGTGGAAGGAAAACTACCTCTTTTGAGGTAGCTATTAACACAAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000064240.14 ENSMUST00000101499.10 ENSMUST00000185739.8 ENSMUST00000188326.3 |
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| CDS-3UTR GCA 90 bp | CTTGTGTTAATAGCTACCTCAAAAGAGGTAGTTTTCCTTCCACAGTCAAAGGTCTCATGTGGCACATGCTaGAGAGGAGGCGGTGGCATC | + |
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Preference number: 4 (lower is better) Translates to: LVLIATSKEVVFLPQSKVSCGTC*RGGGGI Trigger: GATGCCACCGCCTCCTCTGCAGCATGTGCCACATGA...GACCTTTGACTGTGGAAGGAAAACTACCTCTTTTGAGGTAGCTATTAACACAAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000064240.14 ENSMUST00000101499.10 ENSMUST00000185739.8 ENSMUST00000188326.3 |
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| CDS-3UTR GCA 90 bp | ACAAGACTTGTGTTAATAGCTACCTCAAAAGAGGTAGTTTTCCTTCCACAGTCATGCTCATGTGGCACATaGTGCAGAGGAGGCGGTGGC | + |
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Preference number: 4 (lower is better) Translates to: TRLVLIATSKEVVFLPQSCSCGT*CRGGGG Trigger: GCCACCGCCTCCTCTGCAGCATGTGCCACATGAGCA...TGACTGTGGAAGGAAAACTACCTCTTTTGAGGTAGCTATTAACACAAGTCTTGT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000064240.14 ENSMUST00000101499.10 ENSMUST00000185739.8 ENSMUST00000188326.3 |
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| CDS-3UTR GCA 90 bp | CTTGTGTTAATAGCTACCTCAAAAGAGGTAGTTTTCCTTCCACAGTCAAAGGTCAGGAGGTGGGGGTGGTaGGTAATGTTGCTGTGGAGG | + |
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Preference number: 4 (lower is better) Translates to: LVLIATSKEVVFLPQSKVRRWGW*VMLLWR Trigger: CCTCCACAGCAACATTACGCACCACCCCCACCTCCT...GACCTTTGACTGTGGAAGGAAAACTACCTCTTTTGAGGTAGCTATTAACACAAG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000064240.14 ENSMUST00000101499.10 ENSMUST00000185739.8 |
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| CDS-3UTR CCA 90 bp | CTTGTGTTAATAGCTACCTCAAAAGAGGTAGTTTTCCTTCCACAGTCAAAGGTCTGGAGGAGGTGGGGGTaGTGCGTAATGTTGCTGTGG | + |
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Preference number: 4 (lower is better) Translates to: LVLIATSKEVVFLPQSKVWRRWG*CVMLLW Trigger: CCACAGCAACATTACGCACCACCCCCACCTCCTCCA...GACCTTTGACTGTGGAAGGAAAACTACCTCTTTTGAGGTAGCTATTAACACAAG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000064240.14 ENSMUST00000101499.10 ENSMUST00000185739.8 |
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| CDS-3UTR CCA 90 bp | CTTGTGTTAATAGCTACCTCAAAAGAGGTAGTTTTCCTTCCACAGTCAAAGGTCTGGATGGCTTATTGGTaGTGGAGGAGGTGGGGGTGG | + |
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Preference number: 4 (lower is better) Translates to: LVLIATSKEVVFLPQSKVWMAYW*WRRWGW Trigger: CCACCCCCACCTCCTCCACCACCAATAAGCCATCCA...GACCTTTGACTGTGGAAGGAAAACTACCTCTTTTGAGGTAGCTATTAACACAAG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000064240.14 ENSMUST00000101499.10 ENSMUST00000185739.8 |
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| CDS-3UTR CCA 90 bp | CTTGTGTTAATAGCTACCTCAAAAGAGGTAGTTTTCCTTCCACAGTCAAAGGTCGGGTGCAGTTACAGGTaGACCACCATGCTGAGGTGG | + |
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Preference number: 4 (lower is better) Translates to: LVLIATSKEVVFLPQSKVGCSYR*TTMLRW Trigger: CCACCTCAGCATGGTGGTCCACCTGTAACTGCACCC...GACCTTTGACTGTGGAAGGAAAACTACCTCTTTTGAGGTAGCTATTAACACAAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000064240.14 ENSMUST00000101499.10 ENSMUST00000185739.8 |
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| CDS-3UTR GCA 90 bp | ACAAGACTTGTGTTAATAGCTACCTCAAAAGAGGTAGTTTTCCTTCCACAGTCATCATGTGGCACATGCTaGAGAGGAGGCGGTGGCATC | + |
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Preference number: 4 (lower is better) Translates to: TRLVLIATSKEVVFLPQSSCGTC*RGGGGI Trigger: GATGCCACCGCCTCCTCTGCAGCATGTGCCACATGA...TGACTGTGGAAGGAAAACTACCTCTTTTGAGGTAGCTATTAACACAAGTCTTGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000064240.14 ENSMUST00000101499.10 ENSMUST00000185739.8 ENSMUST00000188326.3 |
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| CDS-3UTR GCA 90 bp | GTTAATAGCTACCTCAAAAGAGGTAGTTTTCCTTCCACAGTCAAAGGTCAATTATGCTCATGTGGCACATaGTGCAGAGGAGGCGGTGGC | + |
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Preference number: 4 (lower is better) Translates to: VNSYLKRGSFPSTVKGQLCSCGT*CRGGGG Trigger: GCCACCGCCTCCTCTGCAGCATGTGCCACATGAGCA...TAATTGACCTTTGACTGTGGAAGGAAAACTACCTCTTTTGAGGTAGCTATTAAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000064240.14 ENSMUST00000101499.10 ENSMUST00000185739.8 ENSMUST00000188326.3 |
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| CDS-3UTR GCA 90 bp | AAAGTAACAGTTAAGATAGAATTGTGCTCAACCAAGCCACTTATCTGCACTACATGCTCATGTGGCACATaGTGCAGAGGAGGCGGTGGC | + |
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Preference number: 4 (lower is better) Translates to: KVTVKIELCSTKPLICTTCSCGT*CRGGGG Trigger: GCCACCGCCTCCTCTGCAGCATGTGCCACATGAGCA...TGTAGTGCAGATAAGTGGCTTGGTTGAGCACAATTCTATCTTAACTGTTACTTT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000064240.14 ENSMUST00000101499.10 ENSMUST00000185739.8 ENSMUST00000188326.3 |
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| CDS-3UTR GCA 90 bp | GACTCTAAAGGCACCTTACATGGCACTGAAATTCACAATCTAACCATGACTTTTAGGAGGTGGGGGTGGTaGGTAATGTTGCTGTGGAGG | + |
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Preference number: 4 (lower is better) Translates to: DSKGTLHGTEIHNLTMTFRRWGW*VMLLWR Trigger: CCTCCACAGCAACATTACGCACCACCCCCACCTCCT...AAAAGTCATGGTTAGATTGTGAATTTCAGTGCCATGTAAGGTGCCTTTAGAGTC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000064240.14 ENSMUST00000101499.10 ENSMUST00000185739.8 |
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| CDS-3UTR GCA 90 bp | TTGAGAGACAAGACTTGTGTTAATAGCTACCTCAAAAGAGGTAGTTTTCCTTCCATGGTGAGGAGGGGGTaGAGTTACAGGTGGACCACC | + |
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Preference number: 4 (lower is better) Translates to: LRDKTCVNSYLKRGSFPSMVRRG*SYRWTT Trigger: GGTGGTCCACCTGTAACTGCACCCCCTCCTCACCAT...GGAAGGAAAACTACCTCTTTTGAGGTAGCTATTAACACAAGTCTTGTCTCTCAA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000064240.14 ENSMUST00000101499.10 ENSMUST00000185739.8 |
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| CDS-3UTR GCA 90 bp | CTTGTGTTAATAGCTACCTCAAAAGAGGTAGTTTTCCTTCCACAGTCAAAGGTCAGGTGGCCCTCTTGGTaGAGGCCATATACCAGGACT | + |
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Preference number: 4 (lower is better) Translates to: LVLIATSKEVVFLPQSKVRWPSW*RPYTRT Trigger: AGTCCTGGTATATGGCCTGCACCAAGAGGGCCACCT...GACCTTTGACTGTGGAAGGAAAACTACCTCTTTTGAGGTAGCTATTAACACAAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000064240.14 ENSMUST00000101499.10 ENSMUST00000185739.8 ENSMUST00000188326.3 |
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| CDS-3UTR CCA 90 bp | ACAAGACTTGTGTTAATAGCTACCTCAAAAGAGGTAGTTTTCCTTCCACAGTCAGTGGAGGTGGAGCCATaGACAATTCTGCCGGAGGAG | + |
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Preference number: 4 (lower is better) Translates to: TRLVLIATSKEVVFLPQSVEVEP*TILPEE Trigger: CTCCTCCGGCAGAATTGTCCATGGCTCCACCTCCAC...TGACTGTGGAAGGAAAACTACCTCTTTTGAGGTAGCTATTAACACAAGTCTTGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000064240.14 ENSMUST00000101499.10 ENSMUST00000185739.8 ENSMUST00000188326.3 |
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| CDS-3UTR CCA 90 bp | CTTGTGTTAATAGCTACCTCAAAAGAGGTAGTTTTCCTTCCACAGTCAAAGGTCACTGACCGAACGAGGTaGAGGTGGAGCCATGGACAA | + |
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Preference number: 4 (lower is better) Translates to: LVLIATSKEVVFLPQSKVTDRTR*RWSHGQ Trigger: TTGTCCATGGCTCCACCTCCACCTCGTTCGGTCAGT...GACCTTTGACTGTGGAAGGAAAACTACCTCTTTTGAGGTAGCTATTAACACAAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000064240.14 ENSMUST00000101499.10 ENSMUST00000185739.8 |
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| CDS-3UTR CCA 90 bp | ACAAGACTTGTGTTAATAGCTACCTCAAAAGAGGTAGTTTTCCTTCCACAGTCATGGTGGTGGAGGAGGTaGGGGTGGTGCGTAATGTTG | + |
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Preference number: 4 (lower is better) Translates to: TRLVLIATSKEVVFLPQSWWWRR*GWCVML Trigger: CAACATTACGCACCACCCCCACCTCCTCCACCACCA...TGACTGTGGAAGGAAAACTACCTCTTTTGAGGTAGCTATTAACACAAGTCTTGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000064240.14 ENSMUST00000101499.10 ENSMUST00000185739.8 |
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| CDS-3UTR CCA 90 bp | GACTCTAAAGGCACCTTACATGGCACTGAAATTCACAATCTAACCATGACTTTTTGGATGGCTTATTGGTaGTGGAGGAGGTGGGGGTGG | + |
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Preference number: 4 (lower is better) Translates to: DSKGTLHGTEIHNLTMTFWMAYW*WRRWGW Trigger: CCACCCCCACCTCCTCCACCACCAATAAGCCATCCA...AAAAGTCATGGTTAGATTGTGAATTTCAGTGCCATGTAAGGTGCCTTTAGAGTC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 3 transcripts: ENSMUST00000064240.14 ENSMUST00000101499.10 ENSMUST00000185739.8 |
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| CDS-3UTR CCA 90 bp | TTGAGAGACAAGACTTGTGTTAATAGCTACCTCAAAAGAGGTAGTTTTCCTTCCAGGAGGTGGCCCTCTTaGTGCAGGCCATATACCAGG | + |
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Preference number: 4 (lower is better) Translates to: LRDKTCVNSYLKRGSFPSRRWPS*CRPYTR Trigger: CCTGGTATATGGCCTGCACCAAGAGGGCCACCTCCT...GGAAGGAAAACTACCTCTTTTGAGGTAGCTATTAACACAAGTCTTGTCTCTCAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000064240.14 ENSMUST00000101499.10 ENSMUST00000185739.8 ENSMUST00000188326.3 |
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| CDS-3UTR TCA 90 bp | GTTAATAGCTACCTCAAAAGAGGTAGTTTTCCTTCCACAGTCAAAGGTCAATTATTGCGGGCATCCTGCTaGCAGTCCTTTGAGTCCGAG | + |
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Preference number: 4 (lower is better) Translates to: VNSYLKRGSFPSTVKGQLLRASC*QSFESE Trigger: CTCGGACTCAAAGGACTGTCAGCAGGATGCCCGCAA...TAATTGACCTTTGACTGTGGAAGGAAAACTACCTCTTTTGAGGTAGCTATTAAC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000064240.14 ENSMUST00000101499.10 ENSMUST00000185739.8 ENSMUST00000188326.3 |
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| CDS-3UTR TCA 90 bp | CTTGTGTTAATAGCTACCTCAAAAGAGGTAGTTTTCCTTCCACAGTCAAAGGTCTGTCTGGTGGCATTATaGACCGATCGGGGATGTCAG | + |
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Preference number: 4 (lower is better) Translates to: LVLIATSKEVVFLPQSKVCLVAL*TDRGCQ Trigger: CTGACATCCCCGATCGGTTCATAATGCCACCAGACA...GACCTTTGACTGTGGAAGGAAAACTACCTCTTTTGAGGTAGCTATTAACACAAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 4 transcripts: ENSMUST00000064240.14 ENSMUST00000101499.10 ENSMUST00000185739.8 ENSMUST00000188326.3 |
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| CDS-3UTR TCA 90 bp | GACTCTAAAGGCACCTTACATGGCACTGAAATTCACAATCTAACCATGACTTTTGAAAGGTTTCCTGACTaGCCGAACGAGGTGGAGGTG | + |
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Preference number: 4 (lower is better) Translates to: DSKGTLHGTEIHNLTMTFERFPD*PNEVEV Trigger: CACCTCCACCTCGTTCGGTCAGTCAGGAAACCTTTC...AAAAGTCATGGTTAGATTGTGAATTTCAGTGCCATGTAAGGTGCCTTTAGAGTC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000064240.14 ENSMUST00000101499.10 ENSMUST00000185739.8 |
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| CDS-3UTR GCA 90 bp | ATGATTTTGTATCTGATCATCCACCATGAGAATGTTTTCCTGTACCTGACAGAATCATGTGGCACATGCTaGAGAGGAGGCGGTGGCATC | + |
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Preference number: 4 (lower is better) Translates to: MILYLIIHHENVFLYLTESCGTC*RGGGGI Trigger: GATGCCACCGCCTCCTCTGCAGCATGTGCCACATGA...TTCTGTCAGGTACAGGAAAACATTCTCATGGTGGATGATCAGATACAAAATCAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000064240.14 ENSMUST00000101499.10 ENSMUST00000185739.8 |
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| CDS-3UTR GCA 90 bp | AAAGTAACAGTTAAGATAGAATTGTGCTCAACCAAGCCACTTATCTGCACTACATCATGTGGCACATGCTaGAGAGGAGGCGGTGGCATC | + |
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Preference number: 4 (lower is better) Translates to: KVTVKIELCSTKPLICTTSCGTC*RGGGGI Trigger: GATGCCACCGCCTCCTCTGCAGCATGTGCCACATGA...TGTAGTGCAGATAAGTGGCTTGGTTGAGCACAATTCTATCTTAACTGTTACTTT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000064240.14 ENSMUST00000101499.10 ENSMUST00000185739.8 ENSMUST00000188326.3 |
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| CDS-3UTR GCA 90 bp | ATGATTTTGTATCTGATCATCCACCATGAGAATGTTTTCCTGTACCTGACAGAAATGGTGAGGAGGGGGTaGAGTTACAGGTGGACCACC | + |
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Preference number: 4 (lower is better) Translates to: MILYLIIHHENVFLYLTEMVRRG*SYRWTT Trigger: GGTGGTCCACCTGTAACTGCACCCCCTCCTCACCAT...TTCTGTCAGGTACAGGAAAACATTCTCATGGTGGATGATCAGATACAAAATCAT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000064240.14 ENSMUST00000101499.10 ENSMUST00000185739.8 |
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| CDS-3UTR GCA 90 bp | TTGAGAGACAAGACTTGTGTTAATAGCTACCTCAAAAGAGGTAGTTTTCCTTCCAGGTGGCCCTCTTGGTaGAGGCCATATACCAGGACT | + |
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Preference number: 4 (lower is better) Translates to: LRDKTCVNSYLKRGSFPSRWPSW*RPYTRT Trigger: AGTCCTGGTATATGGCCTGCACCAAGAGGGCCACCT...GGAAGGAAAACTACCTCTTTTGAGGTAGCTATTAACACAAGTCTTGTCTCTCAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000064240.14 ENSMUST00000101499.10 ENSMUST00000185739.8 ENSMUST00000188326.3 |
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| CDS-3UTR CCA 90 bp | TTGAGAGACAAGACTTGTGTTAATAGCTACCTCAAAAGAGGTAGTTTTCCTTCCCTGCAGAGGAGGCGGTaGCATCATGATGTGCTGCTT | + |
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Preference number: 4 (lower is better) Translates to: LRDKTCVNSYLKRGSFPSLQRRR*HHDVLL Trigger: AAGCAGCACATCATGATGCCACCGCCTCCTCTGCAG...GGAAGGAAAACTACCTCTTTTGAGGTAGCTATTAACACAAGTCTTGTCTCTCAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000064240.14 ENSMUST00000101499.10 ENSMUST00000185739.8 ENSMUST00000188326.3 |
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| CDS-3UTR CCA 90 bp | AATAGCTACCTCAAAAGAGGTAGTTTTCCTTCCACAGTCAAAGGTCAATTAAGAGTGGAGGTGGAGCCATaGACAATTCTGCCGGAGGAG | + |
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Preference number: 4 (lower is better) Translates to: NSYLKRGSFPSTVKGQLRVEVEP*TILPEE Trigger: CTCCTCCGGCAGAATTGTCCATGGCTCCACCTCCAC...TCTTAATTGACCTTTGACTGTGGAAGGAAAACTACCTCTTTTGAGGTAGCTATT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000064240.14 ENSMUST00000101499.10 ENSMUST00000185739.8 ENSMUST00000188326.3 |
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| CDS-3UTR CCA 90 bp | GTTAATAGCTACCTCAAAAGAGGTAGTTTTCCTTCCACAGTCAAAGGTCAATTAGTGGAGGTGGAGCCATaGACAATTCTGCCGGAGGAG | + |
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Preference number: 4 (lower is better) Translates to: VNSYLKRGSFPSTVKGQLVEVEP*TILPEE Trigger: CTCCTCCGGCAGAATTGTCCATGGCTCCACCTCCAC...TAATTGACCTTTGACTGTGGAAGGAAAACTACCTCTTTTGAGGTAGCTATTAAC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000064240.14 ENSMUST00000101499.10 ENSMUST00000185739.8 ENSMUST00000188326.3 |
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| CDS-3UTR CCA 90 bp | ACAAGACTTGTGTTAATAGCTACCTCAAAAGAGGTAGTTTTCCTTCCACAGTCACGAACGAGGTGGAGGTaGAGCCATGGACAATTCTGC | + |
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Preference number: 4 (lower is better) Translates to: TRLVLIATSKEVVFLPQSRTRWR*SHGQFC Trigger: GCAGAATTGTCCATGGCTCCACCTCCACCTCGTTCG...TGACTGTGGAAGGAAAACTACCTCTTTTGAGGTAGCTATTAACACAAGTCTTGT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000064240.14 ENSMUST00000101499.10 ENSMUST00000185739.8 ENSMUST00000188326.3 |
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| CDS-3UTR CCA 90 bp | AAAGTAACAGTTAAGATAGAATTGTGCTCAACCAAGCCACTTATCTGCACTACATGGAGGAGGTGGGGGTaGTGCGTAATGTTGCTGTGG | + |
|
Preference number: 4 (lower is better) Translates to: KVTVKIELCSTKPLICTTWRRWG*CVMLLW Trigger: CCACAGCAACATTACGCACCACCCCCACCTCCTCCA...TGTAGTGCAGATAAGTGGCTTGGTTGAGCACAATTCTATCTTAACTGTTACTTT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000064240.14 ENSMUST00000101499.10 ENSMUST00000185739.8 |
||
| CDS-3UTR CCA 90 bp | ATGATTTTGTATCTGATCATCCACCATGAGAATGTTTTCCTGTACCTGACAGAATGGAGGAGGTGGGGGTaGTGCGTAATGTTGCTGTGG | + |
|
Preference number: 4 (lower is better) Translates to: MILYLIIHHENVFLYLTEWRRWG*CVMLLW Trigger: CCACAGCAACATTACGCACCACCCCCACCTCCTCCA...TTCTGTCAGGTACAGGAAAACATTCTCATGGTGGATGATCAGATACAAAATCAT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000064240.14 ENSMUST00000101499.10 ENSMUST00000185739.8 |
||
| CDS-3UTR CCA 90 bp | GTTAATAGCTACCTCAAAAGAGGTAGTTTTCCTTCCACAGTCAAAGGTCAATTATGGTGGTGGAGGAGGTaGGGGTGGTGCGTAATGTTG | + |
|
Preference number: 4 (lower is better) Translates to: VNSYLKRGSFPSTVKGQLWWWRR*GWCVML Trigger: CAACATTACGCACCACCCCCACCTCCTCCACCACCA...TAATTGACCTTTGACTGTGGAAGGAAAACTACCTCTTTTGAGGTAGCTATTAAC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000064240.14 ENSMUST00000101499.10 ENSMUST00000185739.8 |
||
| CDS-3UTR CCA 90 bp | ACAAGACTTGTGTTAATAGCTACCTCAAAAGAGGTAGTTTTCCTTCCACAGTCACATTGGATGGCTTATTaGTGGTGGAGGAGGTGGGGG | + |
|
Preference number: 4 (lower is better) Translates to: TRLVLIATSKEVVFLPQSHWMAY*WWRRWG Trigger: CCCCCACCTCCTCCACCACCAATAAGCCATCCAATG...TGACTGTGGAAGGAAAACTACCTCTTTTGAGGTAGCTATTAACACAAGTCTTGT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000064240.14 ENSMUST00000101499.10 ENSMUST00000185739.8 |
||
| CDS-3UTR CCA 90 bp | ACAAGACTTGTGTTAATAGCTACCTCAAAAGAGGTAGTTTTCCTTCCACAGTCAAGCCTGGGGAGGGTGTaGCATTGGATGGCTTATTGG | + |
|
Preference number: 4 (lower is better) Translates to: TRLVLIATSKEVVFLPQSSLGRV*HWMAYW Trigger: CCAATAAGCCATCCAATGCCACACCCTCCCCAGGCT...TGACTGTGGAAGGAAAACTACCTCTTTTGAGGTAGCTATTAACACAAGTCTTGT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000064240.14 ENSMUST00000101499.10 ENSMUST00000185739.8 |
||
| CDS-3UTR CCA 90 bp | GACTCTAAAGGCACCTTACATGGCACTGAAATTCACAATCTAACCATGACTTTTTGGAGCAGAGGTCATTaGTGGAGGTGGAGCTTGGCT | + |
|
Preference number: 4 (lower is better) Translates to: DSKGTLHGTEIHNLTMTFWSRGH*WRWSLA Trigger: AGCCAAGCTCCACCTCCACCAATGACCTCTGCTCCA...AAAAGTCATGGTTAGATTGTGAATTTCAGTGCCATGTAAGGTGCCTTTAGAGTC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000064240.14 ENSMUST00000101499.10 ENSMUST00000185739.8 |
||
| CDS-3UTR CCA 90 bp | GACTCTAAAGGCACCTTACATGGCACTGAAATTCACAATCTAACCATGACTTTTAGGGGTTATTGGGGGTaGAGCAGAGGTCATTGGTGG | + |
|
Preference number: 4 (lower is better) Translates to: DSKGTLHGTEIHNLTMTFRGYWG*SRGHWW Trigger: CCACCAATGACCTCTGCTCCACCCCCAATAACCCCT...AAAAGTCATGGTTAGATTGTGAATTTCAGTGCCATGTAAGGTGCCTTTAGAGTC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000064240.14 ENSMUST00000101499.10 ENSMUST00000185739.8 |
||
| CDS-3UTR CCA 90 bp | AATAGCTACCTCAAAAGAGGTAGTTTTCCTTCCACAGTCAAAGGTCAATTAAGAGGGTGCAGTTACAGGTaGACCACCATGCTGAGGTGG | + |
|
Preference number: 4 (lower is better) Translates to: NSYLKRGSFPSTVKGQLRGCSYR*TTMLRW Trigger: CCACCTCAGCATGGTGGTCCACCTGTAACTGCACCC...TCTTAATTGACCTTTGACTGTGGAAGGAAAACTACCTCTTTTGAGGTAGCTATT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000064240.14 ENSMUST00000101499.10 ENSMUST00000185739.8 |
||
| CDS-3UTR CCA 90 bp | AATAGCTACCTCAAAAGAGGTAGTTTTCCTTCCACAGTCAAAGGTCAATTAAGAAGGAGGTGGCCCTCTTaGTGCAGGCCATATACCAGG | + |
|
Preference number: 4 (lower is better) Translates to: NSYLKRGSFPSTVKGQLRRRWPS*CRPYTR Trigger: CCTGGTATATGGCCTGCACCAAGAGGGCCACCTCCT...TCTTAATTGACCTTTGACTGTGGAAGGAAAACTACCTCTTTTGAGGTAGCTATT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000064240.14 ENSMUST00000101499.10 ENSMUST00000185739.8 ENSMUST00000188326.3 |
||
| CDS-3UTR TCA 90 bp | TTAAAATTCTATTACAAAACATTCATCTGGCCTGCCTCCCAGCATAATGGTTTTTTGCGGGCATCCTGCTaGCAGTCCTTTGAGTCCGAG | + |
|
Preference number: 4 (lower is better) Translates to: LKFYYKTFIWPASQHNGFLRASC*QSFESE Trigger: CTCGGACTCAAAGGACTGTCAGCAGGATGCCCGCAA...AAAACCATTATGCTGGGAGGCAGGCCAGATGAATGTTTTGTAATAGAATTTTAA 44% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt. Matches the following 3 transcripts: ENSMUST00000064240.14 ENSMUST00000101499.10 ENSMUST00000185739.8 |
||
| CDS-3UTR TCA 90 bp | ACAAGACTTGTGTTAATAGCTACCTCAAAAGAGGTAGTTTTCCTTCCACAGTCATGTCTGGTGGCATTATaGACCGATCGGGGATGTCAG | + |
|
Preference number: 4 (lower is better) Translates to: TRLVLIATSKEVVFLPQSCLVAL*TDRGCQ Trigger: CTGACATCCCCGATCGGTTCATAATGCCACCAGACA...TGACTGTGGAAGGAAAACTACCTCTTTTGAGGTAGCTATTAACACAAGTCTTGT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 4 transcripts: ENSMUST00000064240.14 ENSMUST00000101499.10 ENSMUST00000185739.8 ENSMUST00000188326.3 |
||
| CDS-3UTR TCA 90 bp | GTTAATAGCTACCTCAAAAGAGGTAGTTTTCCTTCCACAGTCAAAGGTCAATTAGAAAGGTTTCCTGACTaGCCGAACGAGGTGGAGGTG | + |
|
Preference number: 4 (lower is better) Translates to: VNSYLKRGSFPSTVKGQLERFPD*PNEVEV Trigger: CACCTCCACCTCGTTCGGTCAGTCAGGAAACCTTTC...TAATTGACCTTTGACTGTGGAAGGAAAACTACCTCTTTTGAGGTAGCTATTAAC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000064240.14 ENSMUST00000101499.10 ENSMUST00000185739.8 |
||
| CDS-3UTR GCA 90 bp | ATGATTTTGTATCTGATCATCCACCATGAGAATGTTTTCCTGTACCTGACAGAAGAACCTCGTGTGCACTaGTCAATCCGCTGCACAGGA | + |
|
Preference number: 4 (lower is better) Translates to: MILYLIIHHENVFLYLTEEPRVH*SIRCTG Trigger: TCCTGTGCAGCGGATTGAGCAGTGCACACGAGGTTC...TTCTGTCAGGTACAGGAAAACATTCTCATGGTGGATGATCAGATACAAAATCAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000064240.14 ENSMUST00000101499.10 ENSMUST00000185739.8 |
||
| CDS-3UTR GCA 90 bp | GTTAATAGCTACCTCAAAAGAGGTAGTTTTCCTTCCACAGTCAAAGGTCAATTAGAACCTCGTGTGCACTaGTCAATCCGCTGCACAGGA | + |
|
Preference number: 4 (lower is better) Translates to: VNSYLKRGSFPSTVKGQLEPRVH*SIRCTG Trigger: TCCTGTGCAGCGGATTGAGCAGTGCACACGAGGTTC...TAATTGACCTTTGACTGTGGAAGGAAAACTACCTCTTTTGAGGTAGCTATTAAC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000064240.14 ENSMUST00000101499.10 ENSMUST00000185739.8 ENSMUST00000188326.3 |
||
| CDS-3UTR GCA 90 bp | AATAGCTACCTCAAAAGAGGTAGTTTTCCTTCCACAGTCAAAGGTCAATTAAGAGAACCTCGTGTGCACTaGTCAATCCGCTGCACAGGA | + |
|
Preference number: 4 (lower is better) Translates to: NSYLKRGSFPSTVKGQLREPRVH*SIRCTG Trigger: TCCTGTGCAGCGGATTGAGCAGTGCACACGAGGTTC...TCTTAATTGACCTTTGACTGTGGAAGGAAAACTACCTCTTTTGAGGTAGCTATT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000064240.14 ENSMUST00000101499.10 ENSMUST00000185739.8 ENSMUST00000188326.3 |
||
| CDS-3UTR GCA 90 bp | GACTCTAAAGGCACCTTACATGGCACTGAAATTCACAATCTAACCATGACTTTTAGAGAGAACCTCGTGTaGACTGCTCAATCCGCTGCA | + |
|
Preference number: 4 (lower is better) Translates to: DSKGTLHGTEIHNLTMTFRENLV*TAQSAA Trigger: TGCAGCGGATTGAGCAGTGCACACGAGGTTCTCTCT...AAAAGTCATGGTTAGATTGTGAATTTCAGTGCCATGTAAGGTGCCTTTAGAGTC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000064240.14 ENSMUST00000101499.10 ENSMUST00000185739.8 |
||
| CDS-3UTR GCA 90 bp | ACAAGACTTGTGTTAATAGCTACCTCAAAAGAGGTAGTTTTCCTTCCACAGTCAAGAGAGAACCTCGTGTaGACTGCTCAATCCGCTGCA | + |
|
Preference number: 4 (lower is better) Translates to: TRLVLIATSKEVVFLPQSRENLV*TAQSAA Trigger: TGCAGCGGATTGAGCAGTGCACACGAGGTTCTCTCT...TGACTGTGGAAGGAAAACTACCTCTTTTGAGGTAGCTATTAACACAAGTCTTGT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000064240.14 ENSMUST00000101499.10 ENSMUST00000185739.8 ENSMUST00000188326.3 |
||
| CDS-3UTR GCA 90 bp | CTTGTGTTAATAGCTACCTCAAAAGAGGTAGTTTTCCTTCCACAGTCAAAGGTCAGCCATGGACAATTCTaGCGGAGGAGCACGAATATC | + |
|
Preference number: 4 (lower is better) Translates to: LVLIATSKEVVFLPQSKVSHGQF*RRSTNI Trigger: GATATTCGTGCTCCTCCGGCAGAATTGTCCATGGCT...GACCTTTGACTGTGGAAGGAAAACTACCTCTTTTGAGGTAGCTATTAACACAAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000064240.14 ENSMUST00000101499.10 ENSMUST00000185739.8 ENSMUST00000188326.3 |
||
| CDS-3UTR GCA 90 bp | TTAAAATTCTATTACAAAACATTCATCTGGCCTGCCTCCCAGCATAATGGTTTTAGGAGGTGGGGGTGGTaGGTAATGTTGCTGTGGAGG | + |
|
Preference number: 4 (lower is better) Translates to: LKFYYKTFIWPASQHNGFRRWGW*VMLLWR Trigger: CCTCCACAGCAACATTACGCACCACCCCCACCTCCT...AAAACCATTATGCTGGGAGGCAGGCCAGATGAATGTTTTGTAATAGAATTTTAA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 3 transcripts: ENSMUST00000064240.14 ENSMUST00000101499.10 ENSMUST00000185739.8 |
||
| CDS-3UTR GCA 90 bp | ATGATTTTGTATCTGATCATCCACCATGAGAATGTTTTCCTGTACCTGACAGAAAGGTGGCCCTCTTGGTaGAGGCCATATACCAGGACT | + |
|
Preference number: 4 (lower is better) Translates to: MILYLIIHHENVFLYLTERWPSW*RPYTRT Trigger: AGTCCTGGTATATGGCCTGCACCAAGAGGGCCACCT...TTCTGTCAGGTACAGGAAAACATTCTCATGGTGGATGATCAGATACAAAATCAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000064240.14 ENSMUST00000101499.10 ENSMUST00000185739.8 |
||
| CDS-3UTR CCA 90 bp | GTTAATAGCTACCTCAAAAGAGGTAGTTTTCCTTCCACAGTCAAAGGTCAATTACTGCAGAGGAGGCGGTaGCATCATGATGTGCTGCTT | + |
|
Preference number: 4 (lower is better) Translates to: VNSYLKRGSFPSTVKGQLLQRRR*HHDVLL Trigger: AAGCAGCACATCATGATGCCACCGCCTCCTCTGCAG...TAATTGACCTTTGACTGTGGAAGGAAAACTACCTCTTTTGAGGTAGCTATTAAC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000064240.14 ENSMUST00000101499.10 ENSMUST00000185739.8 ENSMUST00000188326.3 |
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| CDS-3UTR CCA 90 bp | AATAGCTACCTCAAAAGAGGTAGTTTTCCTTCCACAGTCAAAGGTCAATTAAGACTGCAGAGGAGGCGGTaGCATCATGATGTGCTGCTT | + |
|
Preference number: 4 (lower is better) Translates to: NSYLKRGSFPSTVKGQLRLQRRR*HHDVLL Trigger: AAGCAGCACATCATGATGCCACCGCCTCCTCTGCAG...TCTTAATTGACCTTTGACTGTGGAAGGAAAACTACCTCTTTTGAGGTAGCTATT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000064240.14 ENSMUST00000101499.10 ENSMUST00000185739.8 ENSMUST00000188326.3 |
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| CDS-3UTR CCA 90 bp | GTTAATAGCTACCTCAAAAGAGGTAGTTTTCCTTCCACAGTCAAAGGTCAATTACGAACGAGGTGGAGGTaGAGCCATGGACAATTCTGC | + |
|
Preference number: 4 (lower is better) Translates to: VNSYLKRGSFPSTVKGQLRTRWR*SHGQFC Trigger: GCAGAATTGTCCATGGCTCCACCTCCACCTCGTTCG...TAATTGACCTTTGACTGTGGAAGGAAAACTACCTCTTTTGAGGTAGCTATTAAC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000064240.14 ENSMUST00000101499.10 ENSMUST00000185739.8 ENSMUST00000188326.3 |
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| CDS-3UTR CCA 90 bp | ATGATTTTGTATCTGATCATCCACCATGAGAATGTTTTCCTGTACCTGACAGAACGAACGAGGTGGAGGTaGAGCCATGGACAATTCTGC | + |
|
Preference number: 4 (lower is better) Translates to: MILYLIIHHENVFLYLTERTRWR*SHGQFC Trigger: GCAGAATTGTCCATGGCTCCACCTCCACCTCGTTCG...TTCTGTCAGGTACAGGAAAACATTCTCATGGTGGATGATCAGATACAAAATCAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000064240.14 ENSMUST00000101499.10 ENSMUST00000185739.8 |
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| CDS-3UTR CCA 90 bp | AATAGCTACCTCAAAAGAGGTAGTTTTCCTTCCACAGTCAAAGGTCAATTAAGACGAACGAGGTGGAGGTaGAGCCATGGACAATTCTGC | + |
|
Preference number: 4 (lower is better) Translates to: NSYLKRGSFPSTVKGQLRRTRWR*SHGQFC Trigger: GCAGAATTGTCCATGGCTCCACCTCCACCTCGTTCG...TCTTAATTGACCTTTGACTGTGGAAGGAAAACTACCTCTTTTGAGGTAGCTATT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000064240.14 ENSMUST00000101499.10 ENSMUST00000185739.8 ENSMUST00000188326.3 |
||
| CDS-3UTR CCA 90 bp | AAAGTAACAGTTAAGATAGAATTGTGCTCAACCAAGCCACTTATCTGCACTACAACTGACCGAACGAGGTaGAGGTGGAGCCATGGACAA | + |
|
Preference number: 4 (lower is better) Translates to: KVTVKIELCSTKPLICTTTDRTR*RWSHGQ Trigger: TTGTCCATGGCTCCACCTCCACCTCGTTCGGTCAGT...TGTAGTGCAGATAAGTGGCTTGGTTGAGCACAATTCTATCTTAACTGTTACTTT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000064240.14 ENSMUST00000101499.10 ENSMUST00000185739.8 |
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| CDS-3UTR CCA 90 bp | TTAAAATTCTATTACAAAACATTCATCTGGCCTGCCTCCCAGCATAATGGTTTTTGGTGGTGGAGGAGGTaGGGGTGGTGCGTAATGTTG | + |
|
Preference number: 4 (lower is better) Translates to: LKFYYKTFIWPASQHNGFWWWRR*GWCVML Trigger: CAACATTACGCACCACCCCCACCTCCTCCACCACCA...AAAACCATTATGCTGGGAGGCAGGCCAGATGAATGTTTTGTAATAGAATTTTAA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 3 transcripts: ENSMUST00000064240.14 ENSMUST00000101499.10 ENSMUST00000185739.8 |
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| CDS-3UTR CCA 90 bp | TTAAAATTCTATTACAAAACATTCATCTGGCCTGCCTCCCAGCATAATGGTTTTTGGATGGCTTATTGGTaGTGGAGGAGGTGGGGGTGG | + |
|
Preference number: 4 (lower is better) Translates to: LKFYYKTFIWPASQHNGFWMAYW*WRRWGW Trigger: CCACCCCCACCTCCTCCACCACCAATAAGCCATCCA...AAAACCATTATGCTGGGAGGCAGGCCAGATGAATGTTTTGTAATAGAATTTTAA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt. Matches the following 3 transcripts: ENSMUST00000064240.14 ENSMUST00000101499.10 ENSMUST00000185739.8 |
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| CDS-3UTR CCA 90 bp | AATAGCTACCTCAAAAGAGGTAGTTTTCCTTCCACAGTCAAAGGTCAATTAAGACATTGGATGGCTTATTaGTGGTGGAGGAGGTGGGGG | + |
|
Preference number: 4 (lower is better) Translates to: NSYLKRGSFPSTVKGQLRHWMAY*WWRRWG Trigger: CCCCCACCTCCTCCACCACCAATAAGCCATCCAATG...TCTTAATTGACCTTTGACTGTGGAAGGAAAACTACCTCTTTTGAGGTAGCTATT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000064240.14 ENSMUST00000101499.10 ENSMUST00000185739.8 |
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| CDS-3UTR CCA 90 bp | TTGAGAGACAAGACTTGTGTTAATAGCTACCTCAAAAGAGGTAGTTTTCCTTCCGGGTGTGGCATTGGATaGCTTATTGGTGGTGGAGGA | + |
|
Preference number: 4 (lower is better) Translates to: LRDKTCVNSYLKRGSFPSGCGIG*LIGGGG Trigger: TCCTCCACCACCAATAAGCCATCCAATGCCACACCC...GGAAGGAAAACTACCTCTTTTGAGGTAGCTATTAACACAAGTCTTGTCTCTCAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000064240.14 ENSMUST00000101499.10 ENSMUST00000185739.8 |
||
| CDS-3UTR CCA 90 bp | ACAAGACTTGTGTTAATAGCTACCTCAAAAGAGGTAGTTTTCCTTCCACAGTCAGGGTGTGGCATTGGATaGCTTATTGGTGGTGGAGGA | + |
|
Preference number: 4 (lower is better) Translates to: TRLVLIATSKEVVFLPQSGCGIG*LIGGGG Trigger: TCCTCCACCACCAATAAGCCATCCAATGCCACACCC...TGACTGTGGAAGGAAAACTACCTCTTTTGAGGTAGCTATTAACACAAGTCTTGT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000064240.14 ENSMUST00000101499.10 ENSMUST00000185739.8 |
||
| CDS-3UTR CCA 90 bp | ATGATTTTGTATCTGATCATCCACCATGAGAATGTTTTCCTGTACCTGACAGAAAGCCTGGGGAGGGTGTaGCATTGGATGGCTTATTGG | + |
|
Preference number: 4 (lower is better) Translates to: MILYLIIHHENVFLYLTESLGRV*HWMAYW Trigger: CCAATAAGCCATCCAATGCCACACCCTCCCCAGGCT...TTCTGTCAGGTACAGGAAAACATTCTCATGGTGGATGATCAGATACAAAATCAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000064240.14 ENSMUST00000101499.10 ENSMUST00000185739.8 |
||
| CDS-3UTR CCA 90 bp | GTTAATAGCTACCTCAAAAGAGGTAGTTTTCCTTCCACAGTCAAAGGTCAATTAAGGGGTTATTGGGGGTaGAGCAGAGGTCATTGGTGG | + |
|
Preference number: 4 (lower is better) Translates to: VNSYLKRGSFPSTVKGQLRGYWG*SRGHWW Trigger: CCACCAATGACCTCTGCTCCACCCCCAATAACCCCT...TAATTGACCTTTGACTGTGGAAGGAAAACTACCTCTTTTGAGGTAGCTATTAAC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 3 transcripts: ENSMUST00000064240.14 ENSMUST00000101499.10 ENSMUST00000185739.8 |
||
| CDS-3UTR CCA 90 bp | TTAAAATTCTATTACAAAACATTCATCTGGCCTGCCTCCCAGCATAATGGTTTTGGGTGCAGTTACAGGTaGACCACCATGCTGAGGTGG | + |
|
Preference number: 4 (lower is better) Translates to: LKFYYKTFIWPASQHNGFGCSYR*TTMLRW Trigger: CCACCTCAGCATGGTGGTCCACCTGTAACTGCACCC...AAAACCATTATGCTGGGAGGCAGGCCAGATGAATGTTTTGTAATAGAATTTTAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000064240.14 ENSMUST00000101499.10 ENSMUST00000185739.8 |
||
| CDS-3UTR CCA 90 bp | CTTGTGTTAATAGCTACCTCAAAAGAGGTAGTTTTCCTTCCACAGTCAAAGGTCAGTAAACGAACGAGGTaGAGGTGGAGCCATGGACAA | + |
|
Preference number: 4 (lower is better) Translates to: LVLIATSKEVVFLPQSKVSKRTR*RWSHGQ Trigger: TTGTCCATGGCTCCACCTCCACCTCGTTCGTTTACT...GACCTTTGACTGTGGAAGGAAAACTACCTCTTTTGAGGTAGCTATTAACACAAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000188326.3 |
||
| CDS-3UTR TCA 90 bp | AATAGCTACCTCAAAAGAGGTAGTTTTCCTTCCACAGTCAAAGGTCAATTAAGATGTCTGGTGGCATTATaGACCGATCGGGGATGTCAG | + |
|
Preference number: 4 (lower is better) Translates to: NSYLKRGSFPSTVKGQLRCLVAL*TDRGCQ Trigger: CTGACATCCCCGATCGGTTCATAATGCCACCAGACA...TCTTAATTGACCTTTGACTGTGGAAGGAAAACTACCTCTTTTGAGGTAGCTATT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 4 transcripts: ENSMUST00000064240.14 ENSMUST00000101499.10 ENSMUST00000185739.8 ENSMUST00000188326.3 |
||
| CDS-3UTR TCA 90 bp | AAAGTAACAGTTAAGATAGAATTGTGCTCAACCAAGCCACTTATCTGCACTACATGTCTGGTGGCATTATaGACCGATCGGGGATGTCAG | + |
|
Preference number: 4 (lower is better) Translates to: KVTVKIELCSTKPLICTTCLVAL*TDRGCQ Trigger: CTGACATCCCCGATCGGTTCATAATGCCACCAGACA...TGTAGTGCAGATAAGTGGCTTGGTTGAGCACAATTCTATCTTAACTGTTACTTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000064240.14 ENSMUST00000101499.10 ENSMUST00000185739.8 ENSMUST00000188326.3 |
||
| CDS-3UTR TCA 90 bp | GACTCTAAAGGCACCTTACATGGCACTGAAATTCACAATCTAACCATGACTTTTATACGAAAGGTTTCCTaGCTGACCGAACGAGGTGGA | + |
|
Preference number: 4 (lower is better) Translates to: DSKGTLHGTEIHNLTMTFIRKVS*LTERGG Trigger: TCCACCTCGTTCGGTCAGTCAGGAAACCTTTCGTAT...AAAAGTCATGGTTAGATTGTGAATTTCAGTGCCATGTAAGGTGCCTTTAGAGTC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000064240.14 ENSMUST00000101499.10 ENSMUST00000185739.8 |
||
| CDS-3UTR TCA 90 bp | CTTGTGTTAATAGCTACCTCAAAAGAGGTAGTTTTCCTTCCACAGTCAAAGGTCTGGTTCTCTAGCACCTaGACTGGAGTCATCCTGAAT | + |
|
Preference number: 4 (lower is better) Translates to: LVLIATSKEVVFLPQSKVWFSST*TGVILN Trigger: ATTCAGGATGACTCCAGTTCAGGTGCTAGAGAACCA...GACCTTTGACTGTGGAAGGAAAACTACCTCTTTTGAGGTAGCTATTAACACAAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000064240.14 ENSMUST00000101499.10 ENSMUST00000185739.8 |
||
| CDS-3UTR GCA 90 bp | ACAAGACTTGTGTTAATAGCTACCTCAAAAGAGGTAGTTTTCCTTCCACAGTCACACTGCTCAATCCGCTaGACAGGATCACTACATCCT | + |
|
Preference number: 4 (lower is better) Translates to: TRLVLIATSKEVVFLPQSHCSIR*TGSLHP Trigger: AGGATGTAGTGATCCTGTGCAGCGGATTGAGCAGTG...TGACTGTGGAAGGAAAACTACCTCTTTTGAGGTAGCTATTAACACAAGTCTTGT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000064240.14 ENSMUST00000101499.10 ENSMUST00000185739.8 ENSMUST00000188326.3 |
||
| CDS-3UTR GCA 90 bp | TTAAAATTCTATTACAAAACATTCATCTGGCCTGCCTCCCAGCATAATGGTTTTGAACCTCGTGTGCACTaGTCAATCCGCTGCACAGGA | + |
|
Preference number: 4 (lower is better) Translates to: LKFYYKTFIWPASQHNGFEPRVH*SIRCTG Trigger: TCCTGTGCAGCGGATTGAGCAGTGCACACGAGGTTC...AAAACCATTATGCTGGGAGGCAGGCCAGATGAATGTTTTGTAATAGAATTTTAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000064240.14 ENSMUST00000101499.10 ENSMUST00000185739.8 |
||
| CDS-3UTR GCA 90 bp | CTTGTGTTAATAGCTACCTCAAAAGAGGTAGTTTTCCTTCCACAGTCAAAGGTCGGCATCATGATGTGCTaGTTTGGAGGAATATGGCTC | + |
|
Preference number: 4 (lower is better) Translates to: LVLIATSKEVVFLPQSKVGIMMC*FGGIWL Trigger: GAGCCATATTCCTCCAAAGCAGCACATCATGATGCC...GACCTTTGACTGTGGAAGGAAAACTACCTCTTTTGAGGTAGCTATTAACACAAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000064240.14 ENSMUST00000101499.10 ENSMUST00000185739.8 ENSMUST00000188326.3 |
||
| CDS-3UTR GCA 90 bp | TTGAGAGACAAGACTTGTGTTAATAGCTACCTCAAAAGAGGTAGTTTTCCTTCCAGCCATGGACAATTCTaGCGGAGGAGCACGAATATC | + |
|
Preference number: 4 (lower is better) Translates to: LRDKTCVNSYLKRGSFPSSHGQF*RRSTNI Trigger: GATATTCGTGCTCCTCCGGCAGAATTGTCCATGGCT...GGAAGGAAAACTACCTCTTTTGAGGTAGCTATTAACACAAGTCTTGTCTCTCAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000064240.14 ENSMUST00000101499.10 ENSMUST00000185739.8 ENSMUST00000188326.3 |
||
| CDS-3UTR CCA 90 bp | CTTGTGTTAATAGCTACCTCAAAAGAGGTAGTTTTCCTTCCACAGTCAAAGGTCATTATAGTGCTCATGTaGCACATGCTGCAGAGGAGG | + |
|
Preference number: 4 (lower is better) Translates to: LVLIATSKEVVFLPQSKVIIVLM*HMLQRR Trigger: CCTCCTCTGCAGCATGTGCCACATGAGCACTATAAT...GACCTTTGACTGTGGAAGGAAAACTACCTCTTTTGAGGTAGCTATTAACACAAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000064240.14 ENSMUST00000101499.10 ENSMUST00000185739.8 ENSMUST00000188326.3 |
||
| CDS-3UTR CCA 90 bp | TTAAAATTCTATTACAAAACATTCATCTGGCCTGCCTCCCAGCATAATGGTTTTACTGACCGAACGAGGTaGAGGTGGAGCCATGGACAA | + |
|
Preference number: 4 (lower is better) Translates to: LKFYYKTFIWPASQHNGFTDRTR*RWSHGQ Trigger: TTGTCCATGGCTCCACCTCCACCTCGTTCGGTCAGT...AAAACCATTATGCTGGGAGGCAGGCCAGATGAATGTTTTGTAATAGAATTTTAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000064240.14 ENSMUST00000101499.10 ENSMUST00000185739.8 |
||
| CDS-3UTR CCA 90 bp | TTAAAATTCTATTACAAAACATTCATCTGGCCTGCCTCCCAGCATAATGGTTTTCATTGGATGGCTTATTaGTGGTGGAGGAGGTGGGGG | + |
|
Preference number: 4 (lower is better) Translates to: LKFYYKTFIWPASQHNGFHWMAY*WWRRWG Trigger: CCCCCACCTCCTCCACCACCAATAAGCCATCCAATG...AAAACCATTATGCTGGGAGGCAGGCCAGATGAATGTTTTGTAATAGAATTTTAA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000064240.14 ENSMUST00000101499.10 ENSMUST00000185739.8 |
||
| CDS-3UTR CCA 90 bp | AAAGTAACAGTTAAGATAGAATTGTGCTCAACCAAGCCACTTATCTGCACTACAGGGTGTGGCATTGGATaGCTTATTGGTGGTGGAGGA | + |
|
Preference number: 4 (lower is better) Translates to: KVTVKIELCSTKPLICTTGCGIG*LIGGGG Trigger: TCCTCCACCACCAATAAGCCATCCAATGCCACACCC...TGTAGTGCAGATAAGTGGCTTGGTTGAGCACAATTCTATCTTAACTGTTACTTT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000064240.14 ENSMUST00000101499.10 ENSMUST00000185739.8 |
||
| CDS-3UTR CCA 90 bp | TTAAAATTCTATTACAAAACATTCATCTGGCCTGCCTCCCAGCATAATGGTTTTAGCCTGGGGAGGGTGTaGCATTGGATGGCTTATTGG | + |
|
Preference number: 4 (lower is better) Translates to: LKFYYKTFIWPASQHNGFSLGRV*HWMAYW Trigger: CCAATAAGCCATCCAATGCCACACCCTCCCCAGGCT...AAAACCATTATGCTGGGAGGCAGGCCAGATGAATGTTTTGTAATAGAATTTTAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 3 transcripts: ENSMUST00000064240.14 ENSMUST00000101499.10 ENSMUST00000185739.8 |
||
| CDS-3UTR CCA 90 bp | GACTCTAAAGGCACCTTACATGGCACTGAAATTCACAATCTAACCATGACTTTTAGCAGAGGTCATTGGTaGAGGTGGAGCTTGGCTATA | + |
|
Preference number: 4 (lower is better) Translates to: DSKGTLHGTEIHNLTMTFSRGHW*RWSLAI Trigger: TATAGCCAAGCTCCACCTCCACCAATGACCTCTGCT...AAAAGTCATGGTTAGATTGTGAATTTCAGTGCCATGTAAGGTGCCTTTAGAGTC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000064240.14 ENSMUST00000101499.10 ENSMUST00000185739.8 |
||
| CDS-3UTR CCA 90 bp | TTAAAATTCTATTACAAAACATTCATCTGGCCTGCCTCCCAGCATAATGGTTTTTGGAGCAGAGGTCATTaGTGGAGGTGGAGCTTGGCT | + |
|
Preference number: 4 (lower is better) Translates to: LKFYYKTFIWPASQHNGFWSRGH*WRWSLA Trigger: AGCCAAGCTCCACCTCCACCAATGACCTCTGCTCCA...AAAACCATTATGCTGGGAGGCAGGCCAGATGAATGTTTTGTAATAGAATTTTAA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000064240.14 ENSMUST00000101499.10 ENSMUST00000185739.8 |
||
| CDS-3UTR CCA 90 bp | GACTCTAAAGGCACCTTACATGGCACTGAAATTCACAATCTAACCATGACTTTTAGGTGGAGGGGGTCCTaGAGGAGGATGATTCATATA | + |
|
Preference number: 4 (lower is better) Translates to: DSKGTLHGTEIHNLTMTFRWRGS*RRMIHI Trigger: TATATGAATCATCCTCCTCCAGGACCCCCTCCACCT...AAAAGTCATGGTTAGATTGTGAATTTCAGTGCCATGTAAGGTGCCTTTAGAGTC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000064240.14 ENSMUST00000101499.10 ENSMUST00000185739.8 |
||
| CDS-3UTR CCA 90 bp | ACAAGACTTGTGTTAATAGCTACCTCAAAAGAGGTAGTTTTCCTTCCACAGTCAGGGCTCAGAGTTCCTTaGTCTTCAGTAAACTGGGGT | + |
|
Preference number: 4 (lower is better) Translates to: TRLVLIATSKEVVFLPQSGLRVP*SSVNWG Trigger: ACCCCAGTTTACTGAAGACCAAGGAACTCTGAGCCC...TGACTGTGGAAGGAAAACTACCTCTTTTGAGGTAGCTATTAACACAAGTCTTGT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000064240.14 ENSMUST00000101499.10 ENSMUST00000185739.8 |
||
| CDS-3UTR CCA 90 bp | GACTCTAAAGGCACCTTACATGGCACTGAAATTCACAATCTAACCATGACTTTTGGGCTCAGAGTTCCTTaGTCTTCAGTAAACTGGGGT | + |
|
Preference number: 4 (lower is better) Translates to: DSKGTLHGTEIHNLTMTFGLRVP*SSVNWG Trigger: ACCCCAGTTTACTGAAGACCAAGGAACTCTGAGCCC...AAAAGTCATGGTTAGATTGTGAATTTCAGTGCCATGTAAGGTGCCTTTAGAGTC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000064240.14 ENSMUST00000101499.10 ENSMUST00000185739.8 |
||
| CDS-3UTR TCA 90 bp | GACTCTAAAGGCACCTTACATGGCACTGAAATTCACAATCTAACCATGACTTTTATGAACATTCTCAAGTaGAGCACGGGTAACGGGCTT | + |
|
Preference number: 4 (lower is better) Translates to: DSKGTLHGTEIHNLTMTFMNILK*STGNGL Trigger: AAGCCCGTTACCCGTGCTTCACTTGAGAATGTTCAT...AAAAGTCATGGTTAGATTGTGAATTTCAGTGCCATGTAAGGTGCCTTTAGAGTC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000064240.14 ENSMUST00000101499.10 ENSMUST00000185739.8 |
||
| CDS-3UTR TCA 90 bp | TTGAGAGACAAGACTTGTGTTAATAGCTACCTCAAAAGAGGTAGTTTTCCTTCCGGGGCAATAGGAGGATaGACATTCTCAAGTGAAGCA | + |
|
Preference number: 4 (lower is better) Translates to: LRDKTCVNSYLKRGSFPSGAIGG*TFSSEA Trigger: TGCTTCACTTGAGAATGTTCATCCTCCTATTGCCCC...GGAAGGAAAACTACCTCTTTTGAGGTAGCTATTAACACAAGTCTTGTCTCTCAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 4 transcripts: ENSMUST00000064240.14 ENSMUST00000101499.10 ENSMUST00000185739.8 ENSMUST00000188326.3 |
||
| CDS-3UTR TCA 90 bp | GACTCTAAAGGCACCTTACATGGCACTGAAATTCACAATCTAACCATGACTTTTGGGGCAATAGGAGGATaGACATTCTCAAGTGAAGCA | + |
|
Preference number: 4 (lower is better) Translates to: DSKGTLHGTEIHNLTMTFGAIGG*TFSSEA Trigger: TGCTTCACTTGAGAATGTTCATCCTCCTATTGCCCC...AAAAGTCATGGTTAGATTGTGAATTTCAGTGCCATGTAAGGTGCCTTTAGAGTC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000064240.14 ENSMUST00000101499.10 ENSMUST00000185739.8 |
||
| CDS-3UTR TCA 90 bp | ATGATTTTGTATCTGATCATCCACCATGAGAATGTTTTCCTGTACCTGACAGAAATACGAAAGGTTTCCTaGCTGACCGAACGAGGTGGA | + |
|
Preference number: 4 (lower is better) Translates to: MILYLIIHHENVFLYLTEIRKVS*LTERGG Trigger: TCCACCTCGTTCGGTCAGTCAGGAAACCTTTCGTAT...TTCTGTCAGGTACAGGAAAACATTCTCATGGTGGATGATCAGATACAAAATCAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000064240.14 ENSMUST00000101499.10 ENSMUST00000185739.8 |
||
| CDS-3UTR TCA 90 bp | GTTAATAGCTACCTCAAAAGAGGTAGTTTTCCTTCCACAGTCAAAGGTCAATTAATACGAAAGGTTTCCTaGCTGACCGAACGAGGTGGA | + |
|
Preference number: 4 (lower is better) Translates to: VNSYLKRGSFPSTVKGQLIRKVS*LTERGG Trigger: TCCACCTCGTTCGGTCAGTCAGGAAACCTTTCGTAT...TAATTGACCTTTGACTGTGGAAGGAAAACTACCTCTTTTGAGGTAGCTATTAAC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000064240.14 ENSMUST00000101499.10 ENSMUST00000185739.8 |
||
| CDS-3UTR GCA 90 bp | TTGAGAGACAAGACTTGTGTTAATAGCTACCTCAAAAGAGGTAGTTTTCCTTCCGGCATCATGATGTGCTaGTTTGGAGGAATATGGCTC | + |
|
Preference number: 4 (lower is better) Translates to: LRDKTCVNSYLKRGSFPSGIMMC*FGGIWL Trigger: GAGCCATATTCCTCCAAAGCAGCACATCATGATGCC...GGAAGGAAAACTACCTCTTTTGAGGTAGCTATTAACACAAGTCTTGTCTCTCAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000064240.14 ENSMUST00000101499.10 ENSMUST00000185739.8 ENSMUST00000188326.3 |
||
| CDS-3UTR GCA 90 bp | ACAAGACTTGTGTTAATAGCTACCTCAAAAGAGGTAGTTTTCCTTCCACAGTCAGGTGGCATCATGATGTaGTGCTTTGGAGGAATATGG | + |
|
Preference number: 4 (lower is better) Translates to: TRLVLIATSKEVVFLPQSGGIMM*CFGGIW Trigger: CCATATTCCTCCAAAGCAGCACATCATGATGCCACC...TGACTGTGGAAGGAAAACTACCTCTTTTGAGGTAGCTATTAACACAAGTCTTGT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000064240.14 ENSMUST00000101499.10 ENSMUST00000185739.8 ENSMUST00000188326.3 |
||
| CDS-3UTR GCA 90 bp | AAAGTAACAGTTAAGATAGAATTGTGCTCAACCAAGCCACTTATCTGCACTACAAGCCATGGACAATTCTaGCGGAGGAGCACGAATATC | + |
|
Preference number: 4 (lower is better) Translates to: KVTVKIELCSTKPLICTTSHGQF*RRSTNI Trigger: GATATTCGTGCTCCTCCGGCAGAATTGTCCATGGCT...TGTAGTGCAGATAAGTGGCTTGGTTGAGCACAATTCTATCTTAACTGTTACTTT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000064240.14 ENSMUST00000101499.10 ENSMUST00000185739.8 ENSMUST00000188326.3 |
||
| CDS-3UTR CCA 90 bp | ACAAGACTTGTGTTAATAGCTACCTCAAAAGAGGTAGTTTTCCTTCCACAGTCAATGATGCTTGTCTGGTaGCATTATGAACCGATCGGG | + |
|
Preference number: 4 (lower is better) Translates to: TRLVLIATSKEVVFLPQSMMLVW*HYEPIG Trigger: CCCGATCGGTTCATAATGCCACCAGACAAGCATCAT...TGACTGTGGAAGGAAAACTACCTCTTTTGAGGTAGCTATTAACACAAGTCTTGT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000064240.14 ENSMUST00000101499.10 ENSMUST00000185739.8 ENSMUST00000188326.3 |
||
| CDS-3UTR CCA 90 bp | GACTCTAAAGGCACCTTACATGGCACTGAAATTCACAATCTAACCATGACTTTTATGATGCTTGTCTGGTaGCATTATGAACCGATCGGG | + |
|
Preference number: 4 (lower is better) Translates to: DSKGTLHGTEIHNLTMTFMMLVW*HYEPIG Trigger: CCCGATCGGTTCATAATGCCACCAGACAAGCATCAT...AAAAGTCATGGTTAGATTGTGAATTTCAGTGCCATGTAAGGTGCCTTTAGAGTC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000064240.14 ENSMUST00000101499.10 ENSMUST00000185739.8 |
||
| CDS-3UTR CCA 90 bp | TTGAGAGACAAGACTTGTGTTAATAGCTACCTCAAAAGAGGTAGTTTTCCTTCCATTATAGTGCTCATGTaGCACATGCTGCAGAGGAGG | + |
|
Preference number: 4 (lower is better) Translates to: LRDKTCVNSYLKRGSFPSIIVLM*HMLQRR Trigger: CCTCCTCTGCAGCATGTGCCACATGAGCACTATAAT...GGAAGGAAAACTACCTCTTTTGAGGTAGCTATTAACACAAGTCTTGTCTCTCAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000064240.14 ENSMUST00000101499.10 ENSMUST00000185739.8 ENSMUST00000188326.3 |
||
| CDS-3UTR CCA 90 bp | ACAAGACTTGTGTTAATAGCTACCTCAAAAGAGGTAGTTTTCCTTCCACAGTCAGGTCATTGGTGGAGGTaGAGCTTGGCTATATACCAA | + |
|
Preference number: 4 (lower is better) Translates to: TRLVLIATSKEVVFLPQSGHWWR*SLAIYQ Trigger: TTGGTATATAGCCAAGCTCCACCTCCACCAATGACC...TGACTGTGGAAGGAAAACTACCTCTTTTGAGGTAGCTATTAACACAAGTCTTGT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000064240.14 ENSMUST00000101499.10 ENSMUST00000185739.8 |
||
| CDS-3UTR CCA 90 bp | AAAGTAACAGTTAAGATAGAATTGTGCTCAACCAAGCCACTTATCTGCACTACAAGCAGAGGTCATTGGTaGAGGTGGAGCTTGGCTATA | + |
|
Preference number: 4 (lower is better) Translates to: KVTVKIELCSTKPLICTTSRGHW*RWSLAI Trigger: TATAGCCAAGCTCCACCTCCACCAATGACCTCTGCT...TGTAGTGCAGATAAGTGGCTTGGTTGAGCACAATTCTATCTTAACTGTTACTTT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000064240.14 ENSMUST00000101499.10 ENSMUST00000185739.8 |
||
| CDS-3UTR CCA 90 bp | GTTAATAGCTACCTCAAAAGAGGTAGTTTTCCTTCCACAGTCAAAGGTCAATTAAGCAGAGGTCATTGGTaGAGGTGGAGCTTGGCTATA | + |
|
Preference number: 4 (lower is better) Translates to: VNSYLKRGSFPSTVKGQLSRGHW*RWSLAI Trigger: TATAGCCAAGCTCCACCTCCACCAATGACCTCTGCT...TAATTGACCTTTGACTGTGGAAGGAAAACTACCTCTTTTGAGGTAGCTATTAAC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000064240.14 ENSMUST00000101499.10 ENSMUST00000185739.8 |
||
| CDS-3UTR CCA 90 bp | GTTAATAGCTACCTCAAAAGAGGTAGTTTTCCTTCCACAGTCAAAGGTCAATTAAGGTGGAGGGGGTCCTaGAGGAGGATGATTCATATA | + |
|
Preference number: 4 (lower is better) Translates to: VNSYLKRGSFPSTVKGQLRWRGS*RRMIHI Trigger: TATATGAATCATCCTCCTCCAGGACCCCCTCCACCT...TAATTGACCTTTGACTGTGGAAGGAAAACTACCTCTTTTGAGGTAGCTATTAAC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000064240.14 ENSMUST00000101499.10 ENSMUST00000185739.8 |
||
| CDS-3UTR CCA 90 bp | GTTAATAGCTACCTCAAAAGAGGTAGTTTTCCTTCCACAGTCAAAGGTCAATTAGGGCTCAGAGTTCCTTaGTCTTCAGTAAACTGGGGT | + |
|
Preference number: 4 (lower is better) Translates to: VNSYLKRGSFPSTVKGQLGLRVP*SSVNWG Trigger: ACCCCAGTTTACTGAAGACCAAGGAACTCTGAGCCC...TAATTGACCTTTGACTGTGGAAGGAAAACTACCTCTTTTGAGGTAGCTATTAAC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000064240.14 ENSMUST00000101499.10 ENSMUST00000185739.8 |
||
| CDS-3UTR CCA 90 bp | GACTCTAAAGGCACCTTACATGGCACTGAAATTCACAATCTAACCATGACTTTTAGGACTCATTCCTCCTaGTTGTGTAAATGGAGGGCT | + |
|
Preference number: 4 (lower is better) Translates to: DSKGTLHGTEIHNLTMTFRTHSS*LCKWRA Trigger: AGCCCTCCATTTACACAACCAGGAGGAATGAGTCCT...AAAAGTCATGGTTAGATTGTGAATTTCAGTGCCATGTAAGGTGCCTTTAGAGTC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000064240.14 ENSMUST00000101499.10 ENSMUST00000185739.8 |
||
| CDS-3UTR CCA 90 bp | TTGAGAGACAAGACTTGTGTTAATAGCTACCTCAAAAGAGGTAGTTTTCCTTCCGGGCTCAGAGTTCCTTaGTCTTCAGTAAACGAACGA | + |
|
Preference number: 4 (lower is better) Translates to: LRDKTCVNSYLKRGSFPSGLRVP*SSVNER Trigger: TCGTTCGTTTACTGAAGACCAAGGAACTCTGAGCCC...GGAAGGAAAACTACCTCTTTTGAGGTAGCTATTAACACAAGTCTTGTCTCTCAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000188326.3 |
||
| CDS-3UTR TCA 90 bp | CTTGTGTTAATAGCTACCTCAAAAGAGGTAGTTTTCCTTCCACAGTCAAAGGTCTCATATGGCGATGGTTaGTATGAGCTTGTAAGTCTC | + |
|
Preference number: 4 (lower is better) Translates to: LVLIATSKEVVFLPQSKVSYGDG*YELVSL Trigger: GAGACTTACAAGCTCATATCAACCATCGCCATATGA...GACCTTTGACTGTGGAAGGAAAACTACCTCTTTTGAGGTAGCTATTAACACAAG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000064240.14 ENSMUST00000101499.10 ENSMUST00000185739.8 ENSMUST00000188326.3 |
||
| CDS-3UTR TCA 90 bp | GTTAATAGCTACCTCAAAAGAGGTAGTTTTCCTTCCACAGTCAAAGGTCAATTAATGAACATTCTCAAGTaGAGCACGGGTAACGGGCTT | + |
|
Preference number: 4 (lower is better) Translates to: VNSYLKRGSFPSTVKGQLMNILK*STGNGL Trigger: AAGCCCGTTACCCGTGCTTCACTTGAGAATGTTCAT...TAATTGACCTTTGACTGTGGAAGGAAAACTACCTCTTTTGAGGTAGCTATTAAC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000064240.14 ENSMUST00000101499.10 ENSMUST00000185739.8 ENSMUST00000188326.3 |
||
| CDS-3UTR TCA 90 bp | AATAGCTACCTCAAAAGAGGTAGTTTTCCTTCCACAGTCAAAGGTCAATTAAGAATGAACATTCTCAAGTaGAGCACGGGTAACGGGCTT | + |
|
Preference number: 4 (lower is better) Translates to: NSYLKRGSFPSTVKGQLRMNILK*STGNGL Trigger: AAGCCCGTTACCCGTGCTTCACTTGAGAATGTTCAT...TCTTAATTGACCTTTGACTGTGGAAGGAAAACTACCTCTTTTGAGGTAGCTATT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000064240.14 ENSMUST00000101499.10 ENSMUST00000185739.8 ENSMUST00000188326.3 |
||
| CDS-3UTR TCA 90 bp | AAAGTAACAGTTAAGATAGAATTGTGCTCAACCAAGCCACTTATCTGCACTACAGGGGCAATAGGAGGATaGACATTCTCAAGTGAAGCA | + |
|
Preference number: 4 (lower is better) Translates to: KVTVKIELCSTKPLICTTGAIGG*TFSSEA Trigger: TGCTTCACTTGAGAATGTTCATCCTCCTATTGCCCC...TGTAGTGCAGATAAGTGGCTTGGTTGAGCACAATTCTATCTTAACTGTTACTTT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000064240.14 ENSMUST00000101499.10 ENSMUST00000185739.8 ENSMUST00000188326.3 |
||
| CDS-3UTR TCA 90 bp | ATGATTTTGTATCTGATCATCCACCATGAGAATGTTTTCCTGTACCTGACAGAATGGTTCTCTAGCACCTaGACTGGAGTCATCCTGAAT | + |
|
Preference number: 4 (lower is better) Translates to: MILYLIIHHENVFLYLTEWFSST*TGVILN Trigger: ATTCAGGATGACTCCAGTTCAGGTGCTAGAGAACCA...TTCTGTCAGGTACAGGAAAACATTCTCATGGTGGATGATCAGATACAAAATCAT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000064240.14 ENSMUST00000101499.10 ENSMUST00000185739.8 |
||
| CDS-3UTR TCA 90 bp | AAAGTAACAGTTAAGATAGAATTGTGCTCAACCAAGCCACTTATCTGCACTACATGGTTCTCTAGCACCTaGACTGGAGTCATCCTGAAT | + |
|
Preference number: 4 (lower is better) Translates to: KVTVKIELCSTKPLICTTWFSST*TGVILN Trigger: ATTCAGGATGACTCCAGTTCAGGTGCTAGAGAACCA...TGTAGTGCAGATAAGTGGCTTGGTTGAGCACAATTCTATCTTAACTGTTACTTT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000064240.14 ENSMUST00000101499.10 ENSMUST00000185739.8 |
||
| CDS-3UTR GCA 90 bp | AAAGTAACAGTTAAGATAGAATTGTGCTCAACCAAGCCACTTATCTGCACTACAGGCATCATGATGTGCTaGTTTGGAGGAATATGGCTC | + |
|
Preference number: 4 (lower is better) Translates to: KVTVKIELCSTKPLICTTGIMMC*FGGIWL Trigger: GAGCCATATTCCTCCAAAGCAGCACATCATGATGCC...TGTAGTGCAGATAAGTGGCTTGGTTGAGCACAATTCTATCTTAACTGTTACTTT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000064240.14 ENSMUST00000101499.10 ENSMUST00000185739.8 ENSMUST00000188326.3 |
||
| CDS-3UTR GCA 90 bp | AAAGTAACAGTTAAGATAGAATTGTGCTCAACCAAGCCACTTATCTGCACTACAGGTGGCATCATGATGTaGTGCTTTGGAGGAATATGG | + |
|
Preference number: 4 (lower is better) Translates to: KVTVKIELCSTKPLICTTGGIMM*CFGGIW Trigger: CCATATTCCTCCAAAGCAGCACATCATGATGCCACC...TGTAGTGCAGATAAGTGGCTTGGTTGAGCACAATTCTATCTTAACTGTTACTTT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000064240.14 ENSMUST00000101499.10 ENSMUST00000185739.8 ENSMUST00000188326.3 |
||
| CDS-3UTR GCA 90 bp | AATAGCTACCTCAAAAGAGGTAGTTTTCCTTCCACAGTCAAAGGTCAATTAAGAGGTGGCATCATGATGTaGTGCTTTGGAGGAATATGG | + |
|
Preference number: 4 (lower is better) Translates to: NSYLKRGSFPSTVKGQLRGGIMM*CFGGIW Trigger: CCATATTCCTCCAAAGCAGCACATCATGATGCCACC...TCTTAATTGACCTTTGACTGTGGAAGGAAAACTACCTCTTTTGAGGTAGCTATT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000064240.14 ENSMUST00000101499.10 ENSMUST00000185739.8 ENSMUST00000188326.3 |
||
| CDS-3UTR CCA 90 bp | AAAGTAACAGTTAAGATAGAATTGTGCTCAACCAAGCCACTTATCTGCACTACAATTATAGTGCTCATGTaGCACATGCTGCAGAGGAGG | + |
|
Preference number: 4 (lower is better) Translates to: KVTVKIELCSTKPLICTTIIVLM*HMLQRR Trigger: CCTCCTCTGCAGCATGTGCCACATGAGCACTATAAT...TGTAGTGCAGATAAGTGGCTTGGTTGAGCACAATTCTATCTTAACTGTTACTTT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000064240.14 ENSMUST00000101499.10 ENSMUST00000185739.8 ENSMUST00000188326.3 |
||
| CDS-3UTR CCA 90 bp | AATAGCTACCTCAAAAGAGGTAGTTTTCCTTCCACAGTCAAAGGTCAATTAAGAGGTCATTGGTGGAGGTaGAGCTTGGCTATATACCAA | + |
|
Preference number: 4 (lower is better) Translates to: NSYLKRGSFPSTVKGQLRGHWWR*SLAIYQ Trigger: TTGGTATATAGCCAAGCTCCACCTCCACCAATGACC...TCTTAATTGACCTTTGACTGTGGAAGGAAAACTACCTCTTTTGAGGTAGCTATT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000064240.14 ENSMUST00000101499.10 ENSMUST00000185739.8 |
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| CDS-3UTR CCA 90 bp | AAAGTAACAGTTAAGATAGAATTGTGCTCAACCAAGCCACTTATCTGCACTACAGGTCATTGGTGGAGGTaGAGCTTGGCTATATACCAA | + |
|
Preference number: 4 (lower is better) Translates to: KVTVKIELCSTKPLICTTGHWWR*SLAIYQ Trigger: TTGGTATATAGCCAAGCTCCACCTCCACCAATGACC...TGTAGTGCAGATAAGTGGCTTGGTTGAGCACAATTCTATCTTAACTGTTACTTT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000064240.14 ENSMUST00000101499.10 ENSMUST00000185739.8 |
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| CDS-3UTR CCA 90 bp | TTAAAATTCTATTACAAAACATTCATCTGGCCTGCCTCCCAGCATAATGGTTTTAGGTGGAGGGGGTCCTaGAGGAGGATGATTCATATA | + |
|
Preference number: 4 (lower is better) Translates to: LKFYYKTFIWPASQHNGFRWRGS*RRMIHI Trigger: TATATGAATCATCCTCCTCCAGGACCCCCTCCACCT...AAAACCATTATGCTGGGAGGCAGGCCAGATGAATGTTTTGTAATAGAATTTTAA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 3 transcripts: ENSMUST00000064240.14 ENSMUST00000101499.10 ENSMUST00000185739.8 |
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| CDS-3UTR CCA 90 bp | AAAGTAACAGTTAAGATAGAATTGTGCTCAACCAAGCCACTTATCTGCACTACAAGGACTCATTCCTCCTaGTTGTGTAAATGGAGGGCT | + |
|
Preference number: 4 (lower is better) Translates to: KVTVKIELCSTKPLICTTRTHSS*LCKWRA Trigger: AGCCCTCCATTTACACAACCAGGAGGAATGAGTCCT...TGTAGTGCAGATAAGTGGCTTGGTTGAGCACAATTCTATCTTAACTGTTACTTT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000064240.14 ENSMUST00000101499.10 ENSMUST00000185739.8 ENSMUST00000188326.3 |
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| CDS-3UTR CCA 90 bp | AATAGCTACCTCAAAAGAGGTAGTTTTCCTTCCACAGTCAAAGGTCAATTAAGAAGGACTCATTCCTCCTaGTTGTGTAAATGGAGGGCT | + |
|
Preference number: 4 (lower is better) Translates to: NSYLKRGSFPSTVKGQLRRTHSS*LCKWRA Trigger: AGCCCTCCATTTACACAACCAGGAGGAATGAGTCCT...TCTTAATTGACCTTTGACTGTGGAAGGAAAACTACCTCTTTTGAGGTAGCTATT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000064240.14 ENSMUST00000101499.10 ENSMUST00000185739.8 ENSMUST00000188326.3 |
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| CDS-3UTR CCA 90 bp | GTTAATAGCTACCTCAAAAGAGGTAGTTTTCCTTCCACAGTCAAAGGTCAATTAAGGACTCATTCCTCCTaGTTGTGTAAATGGAGGGCT | + |
|
Preference number: 4 (lower is better) Translates to: VNSYLKRGSFPSTVKGQLRTHSS*LCKWRA Trigger: AGCCCTCCATTTACACAACCAGGAGGAATGAGTCCT...TAATTGACCTTTGACTGTGGAAGGAAAACTACCTCTTTTGAGGTAGCTATTAAC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000064240.14 ENSMUST00000101499.10 ENSMUST00000185739.8 ENSMUST00000188326.3 |
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| CDS-3UTR TCA 90 bp | TTGAGAGACAAGACTTGTGTTAATAGCTACCTCAAAAGAGGTAGTTTTCCTTCCGCTTGTAAGTCTCTCTaGGACAGATATGTTCTCTTG | + |
|
Preference number: 4 (lower is better) Translates to: LRDKTCVNSYLKRGSFPSACKSL*DRYVLL Trigger: CAAGAGAACATATCTGTCTCAGAGAGACTTACAAGC...GGAAGGAAAACTACCTCTTTTGAGGTAGCTATTAACACAAGTCTTGTCTCTCAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000064240.14 ENSMUST00000101499.10 ENSMUST00000185739.8 ENSMUST00000188326.3 |
||
| CDS-3UTR TCA 90 bp | ACAAGACTTGTGTTAATAGCTACCTCAAAAGAGGTAGTTTTCCTTCCACAGTCAGCTTGTAAGTCTCTCTaGGACAGATATGTTCTCTTG | + |
|
Preference number: 4 (lower is better) Translates to: TRLVLIATSKEVVFLPQSACKSL*DRYVLL Trigger: CAAGAGAACATATCTGTCTCAGAGAGACTTACAAGC...TGACTGTGGAAGGAAAACTACCTCTTTTGAGGTAGCTATTAACACAAGTCTTGT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000064240.14 ENSMUST00000101499.10 ENSMUST00000185739.8 ENSMUST00000188326.3 |
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| CDS-3UTR TCA 90 bp | ACAAGACTTGTGTTAATAGCTACCTCAAAAGAGGTAGTTTTCCTTCCACAGTCATCATATGGCGATGGTTaGTATGAGCTTGTAAGTCTC | + |
|
Preference number: 4 (lower is better) Translates to: TRLVLIATSKEVVFLPQSSYGDG*YELVSL Trigger: GAGACTTACAAGCTCATATCAACCATCGCCATATGA...TGACTGTGGAAGGAAAACTACCTCTTTTGAGGTAGCTATTAACACAAGTCTTGT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000064240.14 ENSMUST00000101499.10 ENSMUST00000185739.8 ENSMUST00000188326.3 |
||
| CDS-3UTR TCA 90 bp | TTGAGAGACAAGACTTGTGTTAATAGCTACCTCAAAAGAGGTAGTTTTCCTTCCTCATATGGCGATGGTTaGTATGAGCTTGTAAGTCTC | + |
|
Preference number: 4 (lower is better) Translates to: LRDKTCVNSYLKRGSFPSSYGDG*YELVSL Trigger: GAGACTTACAAGCTCATATCAACCATCGCCATATGA...GGAAGGAAAACTACCTCTTTTGAGGTAGCTATTAACACAAGTCTTGTCTCTCAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000064240.14 ENSMUST00000101499.10 ENSMUST00000185739.8 ENSMUST00000188326.3 |
||
| CDS-3UTR TCA 90 bp | TTAAAATTCTATTACAAAACATTCATCTGGCCTGCCTCCCAGCATAATGGTTTTATGAACATTCTCAAGTaGAGCACGGGTAACGGGCTT | + |
|
Preference number: 4 (lower is better) Translates to: LKFYYKTFIWPASQHNGFMNILK*STGNGL Trigger: AAGCCCGTTACCCGTGCTTCACTTGAGAATGTTCAT...AAAACCATTATGCTGGGAGGCAGGCCAGATGAATGTTTTGTAATAGAATTTTAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000064240.14 ENSMUST00000101499.10 ENSMUST00000185739.8 |
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| CDS-3UTR GCA 90 bp | TTAAAATTCTATTACAAAACATTCATCTGGCCTGCCTCCCAGCATAATGGTTTTGGCATCATGATGTGCTaGTTTGGAGGAATATGGCTC | + |
|
Preference number: 4 (lower is better) Translates to: LKFYYKTFIWPASQHNGFGIMMC*FGGIWL Trigger: GAGCCATATTCCTCCAAAGCAGCACATCATGATGCC...AAAACCATTATGCTGGGAGGCAGGCCAGATGAATGTTTTGTAATAGAATTTTAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000064240.14 ENSMUST00000101499.10 ENSMUST00000185739.8 |
||
| CDS-3UTR CCA 90 bp | CTTGTGTTAATAGCTACCTCAAAAGAGGTAGTTTTCCTTCCACAGTCAAAGGTCACGAATATCCTCATGTaGCTGATTATAGTGCTCATG | + |
|
Preference number: 4 (lower is better) Translates to: LVLIATSKEVVFLPQSKVTNILM*LIIVLM Trigger: CATGAGCACTATAATCAGCCACATGAGGATATTCGT...GACCTTTGACTGTGGAAGGAAAACTACCTCTTTTGAGGTAGCTATTAACACAAG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000064240.14 ENSMUST00000101499.10 ENSMUST00000185739.8 ENSMUST00000188326.3 |
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| CDS-3UTR CCA 90 bp | TTGAGAGACAAGACTTGTGTTAATAGCTACCTCAAAAGAGGTAGTTTTCCTTCCTGCGTAATGTTGCTGTaGAGGCATAATATGATGAGG | + |
|
Preference number: 4 (lower is better) Translates to: LRDKTCVNSYLKRGSFPSCVMLL*RHNMMR Trigger: CCTCATCATATTATGCCTCCACAGCAACATTACGCA...GGAAGGAAAACTACCTCTTTTGAGGTAGCTATTAACACAAGTCTTGTCTCTCAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000064240.14 ENSMUST00000101499.10 ENSMUST00000185739.8 |
||
| CDS-3UTR CCA 90 bp | ACAAGACTTGTGTTAATAGCTACCTCAAAAGAGGTAGTTTTCCTTCCACAGTCATGCGTAATGTTGCTGTaGAGGCATAATATGATGAGG | + |
|
Preference number: 4 (lower is better) Translates to: TRLVLIATSKEVVFLPQSCVMLL*RHNMMR Trigger: CCTCATCATATTATGCCTCCACAGCAACATTACGCA...TGACTGTGGAAGGAAAACTACCTCTTTTGAGGTAGCTATTAACACAAGTCTTGT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000064240.14 ENSMUST00000101499.10 ENSMUST00000185739.8 |
||
| CDS-3UTR TCA 90 bp | GTTAATAGCTACCTCAAAAGAGGTAGTTTTCCTTCCACAGTCAAAGGTCAATTATCATATGGCGATGGTTaGTATGAGCTTGTAAGTCTC | + |
|
Preference number: 4 (lower is better) Translates to: VNSYLKRGSFPSTVKGQLSYGDG*YELVSL Trigger: GAGACTTACAAGCTCATATCAACCATCGCCATATGA...TAATTGACCTTTGACTGTGGAAGGAAAACTACCTCTTTTGAGGTAGCTATTAAC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000064240.14 ENSMUST00000101499.10 ENSMUST00000185739.8 ENSMUST00000188326.3 |
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| CDS-3UTR GCA 90 bp | ACAAGACTTGTGTTAATAGCTACCTCAAAAGAGGTAGTTTTCCTTCCACAGTCAAGCAAAAGACATGCTTaGATGGAATCATTCTCCCAT | + |
|
Preference number: 4 (lower is better) Translates to: TRLVLIATSKEVVFLPQSSKRHA*MESFSH Trigger: ATGGGAGAATGATTCCATGCAAGCATGTCTTTTGCT...TGACTGTGGAAGGAAAACTACCTCTTTTGAGGTAGCTATTAACACAAGTCTTGT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 4 transcripts: ENSMUST00000064240.14 ENSMUST00000101499.10 ENSMUST00000185739.8 ENSMUST00000188326.3 |
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| CDS-3UTR CCA 90 bp | TTGAGAGACAAGACTTGTGTTAATAGCTACCTCAAAAGAGGTAGTTTTCCTTCCAAAGACATGCTTGCATaGAATCATTCTCCCATAGAC | + |
|
Preference number: 4 (lower is better) Translates to: LRDKTCVNSYLKRGSFPSKDMLA*NHSPID Trigger: GTCTATGGGAGAATGATTCCATGCAAGCATGTCTTT...GGAAGGAAAACTACCTCTTTTGAGGTAGCTATTAACACAAGTCTTGTCTCTCAA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000064240.14 ENSMUST00000101499.10 ENSMUST00000185739.8 ENSMUST00000188326.3 |
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| CDS-3UTR CCA 90 bp | GACTCTAAAGGCACCTTACATGGCACTGAAATTCACAATCTAACCATGACTTTTAAAGACATGCTTGCATaGAATCATTCTCCCATAGAC | + |
|
Preference number: 4 (lower is better) Translates to: DSKGTLHGTEIHNLTMTFKDMLA*NHSPID Trigger: GTCTATGGGAGAATGATTCCATGCAAGCATGTCTTT...AAAAGTCATGGTTAGATTGTGAATTTCAGTGCCATGTAAGGTGCCTTTAGAGTC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000064240.14 ENSMUST00000101499.10 ENSMUST00000185739.8 |
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| CDS-3UTR CCA 90 bp | GTTAATAGCTACCTCAAAAGAGGTAGTTTTCCTTCCACAGTCAAAGGTCAATTATGCGTAATGTTGCTGTaGAGGCATAATATGATGAGG | + |
|
Preference number: 4 (lower is better) Translates to: VNSYLKRGSFPSTVKGQLCVMLL*RHNMMR Trigger: CCTCATCATATTATGCCTCCACAGCAACATTACGCA...TAATTGACCTTTGACTGTGGAAGGAAAACTACCTCTTTTGAGGTAGCTATTAAC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000064240.14 ENSMUST00000101499.10 ENSMUST00000185739.8 |
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| CDS-3UTR TCA 90 bp | AAAGTAACAGTTAAGATAGAATTGTGCTCAACCAAGCCACTTATCTGCACTACAGTTCTCTTGCATCCTTaGACAATGCTACACATAAAG | + |
|
Preference number: 4 (lower is better) Translates to: KVTVKIELCSTKPLICTTVLLHP*TMLHIK Trigger: CTTTATGTGTAGCATTGTTCAAGGATGCAAGAGAAC...TGTAGTGCAGATAAGTGGCTTGGTTGAGCACAATTCTATCTTAACTGTTACTTT 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000064240.14 ENSMUST00000101499.10 ENSMUST00000185739.8 ENSMUST00000188326.3 |
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| CDS-3UTR TCA 90 bp | TTAAAATTCTATTACAAAACATTCATCTGGCCTGCCTCCCAGCATAATGGTTTTGCTTGTAAGTCTCTCTaGGACAGATATGTTCTCTTG | + |
|
Preference number: 4 (lower is better) Translates to: LKFYYKTFIWPASQHNGFACKSL*DRYVLL Trigger: CAAGAGAACATATCTGTCTCAGAGAGACTTACAAGC...AAAACCATTATGCTGGGAGGCAGGCCAGATGAATGTTTTGTAATAGAATTTTAA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000064240.14 ENSMUST00000101499.10 ENSMUST00000185739.8 |
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| CDS-3UTR GCA 90 bp | GTTAATAGCTACCTCAAAAGAGGTAGTTTTCCTTCCACAGTCAAAGGTCAATTAAGCAAAAGACATGCTTaGATGGAATCATTCTCCCAT | + |
|
Preference number: 4 (lower is better) Translates to: VNSYLKRGSFPSTVKGQLSKRHA*MESFSH Trigger: ATGGGAGAATGATTCCATGCAAGCATGTCTTTTGCT...TAATTGACCTTTGACTGTGGAAGGAAAACTACCTCTTTTGAGGTAGCTATTAAC 38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 4 transcripts: ENSMUST00000064240.14 ENSMUST00000101499.10 ENSMUST00000185739.8 ENSMUST00000188326.3 |
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| CDS-3UTR GCA 90 bp | AATAGCTACCTCAAAAGAGGTAGTTTTCCTTCCACAGTCAAAGGTCAATTAAGAAGCAAAAGACATGCTTaGATGGAATCATTCTCCCAT | + |
|
Preference number: 4 (lower is better) Translates to: NSYLKRGSFPSTVKGQLRSKRHA*MESFSH Trigger: ATGGGAGAATGATTCCATGCAAGCATGTCTTTTGCT...TCTTAATTGACCTTTGACTGTGGAAGGAAAACTACCTCTTTTGAGGTAGCTATT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 4 transcripts: ENSMUST00000064240.14 ENSMUST00000101499.10 ENSMUST00000185739.8 ENSMUST00000188326.3 |
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| CDS-3UTR GCA 90 bp | GACTCTAAAGGCACCTTACATGGCACTGAAATTCACAATCTAACCATGACTTTTACAGATATGTTCTCTTaGATCCTTGAACAATGCTAC | + |
|
Preference number: 4 (lower is better) Translates to: DSKGTLHGTEIHNLTMTFTDMFS*ILEQCY Trigger: GTAGCATTGTTCAAGGATGCAAGAGAACATATCTGT...AAAAGTCATGGTTAGATTGTGAATTTCAGTGCCATGTAAGGTGCCTTTAGAGTC 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000064240.14 ENSMUST00000101499.10 ENSMUST00000185739.8 |
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| CDS-3UTR CCA 90 bp | ATGATTTTGTATCTGATCATCCACCATGAGAATGTTTTCCTGTACCTGACAGAAAAAGACATGCTTGCATaGAATCATTCTCCCATAGAC | + |
|
Preference number: 4 (lower is better) Translates to: MILYLIIHHENVFLYLTEKDMLA*NHSPID Trigger: GTCTATGGGAGAATGATTCCATGCAAGCATGTCTTT...TTCTGTCAGGTACAGGAAAACATTCTCATGGTGGATGATCAGATACAAAATCAT 38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000064240.14 ENSMUST00000101499.10 ENSMUST00000185739.8 |
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| CDS-3UTR CCA 90 bp | GTTAATAGCTACCTCAAAAGAGGTAGTTTTCCTTCCACAGTCAAAGGTCAATTAACGAATATCCTCATGTaGCTGATTATAGTGCTCATG | + |
|
Preference number: 4 (lower is better) Translates to: VNSYLKRGSFPSTVKGQLTNILM*LIIVLM Trigger: CATGAGCACTATAATCAGCCACATGAGGATATTCGT...TAATTGACCTTTGACTGTGGAAGGAAAACTACCTCTTTTGAGGTAGCTATTAAC 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000064240.14 ENSMUST00000101499.10 ENSMUST00000185739.8 ENSMUST00000188326.3 |
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| CDS-3UTR CCA 90 bp | AAAGTAACAGTTAAGATAGAATTGTGCTCAACCAAGCCACTTATCTGCACTACAACGAATATCCTCATGTaGCTGATTATAGTGCTCATG | + |
|
Preference number: 4 (lower is better) Translates to: KVTVKIELCSTKPLICTTTNILM*LIIVLM Trigger: CATGAGCACTATAATCAGCCACATGAGGATATTCGT...TGTAGTGCAGATAAGTGGCTTGGTTGAGCACAATTCTATCTTAACTGTTACTTT 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000064240.14 ENSMUST00000101499.10 ENSMUST00000185739.8 ENSMUST00000188326.3 |
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| CDS-3UTR TCA 90 bp | TTAAAATTCTATTACAAAACATTCATCTGGCCTGCCTCCCAGCATAATGGTTTTGTTCTCTTGCATCCTTaGACAATGCTACACATAAAG | + |
|
Preference number: 4 (lower is better) Translates to: LKFYYKTFIWPASQHNGFVLLHP*TMLHIK Trigger: CTTTATGTGTAGCATTGTTCAAGGATGCAAGAGAAC...AAAACCATTATGCTGGGAGGCAGGCCAGATGAATGTTTTGTAATAGAATTTTAA 37% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000064240.14 ENSMUST00000101499.10 ENSMUST00000185739.8 |
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| CDS-3UTR GCA 90 bp | TTAAAATTCTATTACAAAACATTCATCTGGCCTGCCTCCCAGCATAATGGTTTTAGCAAAAGACATGCTTaGATGGAATCATTCTCCCAT | + |
|
Preference number: 4 (lower is better) Translates to: LKFYYKTFIWPASQHNGFSKRHA*MESFSH Trigger: ATGGGAGAATGATTCCATGCAAGCATGTCTTTTGCT...AAAACCATTATGCTGGGAGGCAGGCCAGATGAATGTTTTGTAATAGAATTTTAA 37% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 3 transcripts: ENSMUST00000064240.14 ENSMUST00000101499.10 ENSMUST00000185739.8 |
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| CDS-3UTR GCA 90 bp | GTTAATAGCTACCTCAAAAGAGGTAGTTTTCCTTCCACAGTCAAAGGTCAATTAACAGATATGTTCTCTTaGATCCTTGAACAATGCTAC | + |
|
Preference number: 4 (lower is better) Translates to: VNSYLKRGSFPSTVKGQLTDMFS*ILEQCY Trigger: GTAGCATTGTTCAAGGATGCAAGAGAACATATCTGT...TAATTGACCTTTGACTGTGGAAGGAAAACTACCTCTTTTGAGGTAGCTATTAAC 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000064240.14 ENSMUST00000101499.10 ENSMUST00000185739.8 ENSMUST00000188326.3 |
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| CDS-3UTR GCA 90 bp | AATAGCTACCTCAAAAGAGGTAGTTTTCCTTCCACAGTCAAAGGTCAATTAAGAACAGATATGTTCTCTTaGATCCTTGAACAATGCTAC | + |
|
Preference number: 4 (lower is better) Translates to: NSYLKRGSFPSTVKGQLRTDMFS*ILEQCY Trigger: GTAGCATTGTTCAAGGATGCAAGAGAACATATCTGT...TCTTAATTGACCTTTGACTGTGGAAGGAAAACTACCTCTTTTGAGGTAGCTATT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000064240.14 ENSMUST00000101499.10 ENSMUST00000185739.8 ENSMUST00000188326.3 |
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| CDS-3UTR GCA 90 bp | AAAGTAACAGTTAAGATAGAATTGTGCTCAACCAAGCCACTTATCTGCACTACAACAGATATGTTCTCTTaGATCCTTGAACAATGCTAC | + |
|
Preference number: 4 (lower is better) Translates to: KVTVKIELCSTKPLICTTTDMFS*ILEQCY Trigger: GTAGCATTGTTCAAGGATGCAAGAGAACATATCTGT...TGTAGTGCAGATAAGTGGCTTGGTTGAGCACAATTCTATCTTAACTGTTACTTT 37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000064240.14 ENSMUST00000101499.10 ENSMUST00000185739.8 ENSMUST00000188326.3 |
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| CDS TCA 90 bp | TCATCACCTTGCGGGGCCTTTGCGGGCATCCTGCTGACAGTCCTTTaGGTCCGAGGTGCCGGCTTAACTTTGCTGGCTTGTTTGGAGATG | + |
|
Preference number: 5 (lower is better) Translates to: SSPCGAFAGILLTVL*VRGAGLTLLACLEM Trigger: CATCTCCAAACAAGCCAGCAAAGTTAAGCCGGCACCTCGGACTCAAAGGACTGTCAGCAGGATGCCCGCAAAGGCCCCGCAAGGTGATGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000085487.12 ENSMUST00000101499.10 ENSMUST00000185739.8 |
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| CDS TCA 90 bp | AATCCTTCTTGCGGGGCCTTTGCGGGCATCCTGCTGACAGTCCTTTaGGTCCGAGGTGCCGGCTTAACTTTGCTGGCTTGTTTGGAGATG | + |
|
Preference number: 5 (lower is better) Translates to: NPSCGAFAGILLTVL*VRGAGLTLLACLEM Trigger: CATCTCCAAACAAGCCAGCAAAGTTAAGCCGGCACCTCGGACTCAAAGGACTGTCAGCAGGATGCCCGCAAAGGCCCCGCAAGAAGGATT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000064240.14 |
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| CDS TCA 90 bp | TCAAATCCTTGCGGGGCCTTTGCGGGCATCCTGCTGACAGTCCTTTaGGTCCGAGGTGCCGGCTTAACTTTGCTGGCTTGTTTGGAGATG | + |
|
Preference number: 5 (lower is better) Translates to: SNPCGAFAGILLTVL*VRGAGLTLLACLEM Trigger: CATCTCCAAACAAGCCAGCAAAGTTAAGCCGGCACCTCGGACTCAAAGGACTGTCAGCAGGATGCCCGCAAAGGCCCCGCAAGGATTTGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000188326.3 |
||
| CDS GCA 90 bp | CGGGGCCTTTGCGGGCATCCTGCTGACAGTCCTTTGAGTCCGAGGTaGCGGCTTAACTTTGCTGGCTTGTTTGGAGATGAGCTTTATAGG | + |
|
Preference number: 5 (lower is better) Translates to: RGLCGHPADSPLSPR*RLNFAGLFGDELYR Trigger: CCTATAAAGCTCATCTCCAAACAAGCCAGCAAAGTTAAGCCGGCACCTCGGACTCAAAGGACTGTCAGCAGGATGCCCGCAAAGGCCCCG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000064240.14 ENSMUST00000085487.12 ENSMUST00000101499.10 ENSMUST00000185739.8 ENSMUST00000188326.3 |
||
| CDS GCA 90 bp | CTGTTCTTCGTTATAATCAAATCCTTCATCACCTTGCGGGGCCTTTaGGGGCATCCTGCTGACAGTCCTTTGAGTCCGAGGTGCCGGCTT | + |
|
Preference number: 5 (lower is better) Translates to: LFFVIIKSFITLRGL*GHPADSPLSPRCRL Trigger: AAGCCGGCACCTCGGACTCAAAGGACTGTCAGCAGGATGCCCGCAAAGGCCCCGCAAGGTGATGAAGGATTTGATTATAACGAAGAACAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000185739.8 |
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| CDS GCA 90 bp | GTCATATCGCTGTTCTTCGTTATAATCAAATCCTTGCGGGGCCTTTaGGGGCATCCTGCTGACAGTCCTTTGAGTCCGAGGTGCCGGCTT | + |
|
Preference number: 5 (lower is better) Translates to: VISLFFVIIKSLRGL*GHPADSPLSPRCRL Trigger: AAGCCGGCACCTCGGACTCAAAGGACTGTCAGCAGGATGCCCGCAAAGGCCCCGCAAGGATTTGATTATAACGAAGAACAGCGATATGAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000188326.3 |
||
| CDS GCA 90 bp | ATATCGCTGTTCTTCGTTATAATCAAATCCTTCTTGCGGGGCCTTTaGGGGCATCCTGCTGACAGTCCTTTGAGTCCGAGGTGCCGGCTT | + |
|
Preference number: 5 (lower is better) Translates to: ISLFFVIIKSFLRGL*GHPADSPLSPRCRL Trigger: AAGCCGGCACCTCGGACTCAAAGGACTGTCAGCAGGATGCCCGCAAAGGCCCCGCAAGAAGGATTTGATTATAACGAAGAACAGCGATAT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000064240.14 |
||
| CDS GCA 90 bp | TTCTTCGTTATAATCAAATCCTTCTTCATCACCTTGCGGGGCCTTTaGGGGCATCCTGCTGACAGTCCTTTGAGTCCGAGGTGCCGGCTT | + |
|
Preference number: 5 (lower is better) Translates to: FFVIIKSFFITLRGL*GHPADSPLSPRCRL Trigger: AAGCCGGCACCTCGGACTCAAAGGACTGTCAGCAGGATGCCCGCAAAGGCCCCGCAAGGTGATGAAGAAGGATTTGATTATAACGAAGAA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000085487.12 ENSMUST00000101499.10 |
||
| CDS CCA 90 bp | TGGTGCAGGCCATATACCAGGACTCATTCCTCCTGGTTGTGTAAATaGAGGGCTCAGAGTTCCTTGGTCTTCAGTAAACGAACGAGGTGG | + |
|
Preference number: 5 (lower is better) Translates to: WCRPYTRTHSSWLCK*RAQSSLVFSKRTRW Trigger: CCACCTCGTTCGTTTACTGAAGACCAAGGAACTCTGAGCCCTCCATTTACACAACCAGGAGGAATGAGTCCTGGTATATGGCCTGCACCA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000188326.3 |
||
| CDS-3UTR CAA 90 bp | TTGAGAGACAAGACTTGTGTTAATAGCTACCTCAAAAGAGGTAGTTTTCCTTCCGTGGAGCAGAGGTCATaGGTGGAGGTGGAGCTTGGC | + |
|
Preference number: 5 (lower is better) Translates to: LRDKTCVNSYLKRGSFPSVEQRS*VEVELG Trigger: GCCAAGCTCCACCTCCACCAATGACCTCTGCTCCAC...GGAAGGAAAACTACCTCTTTTGAGGTAGCTATTAACACAAGTCTTGTCTCTCAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000064240.14 ENSMUST00000101499.10 ENSMUST00000185739.8 |
||
| CDS-3UTR CAA 90 bp | GACTCTAAAGGCACCTTACATGGCACTGAAATTCACAATCTAACCATGACTTTTGAGGAGGTGGCCCTCTaGGTGCAGGCCATATACCAG | + |
|
Preference number: 5 (lower is better) Translates to: DSKGTLHGTEIHNLTMTFEEVAL*VQAIYQ Trigger: CTGGTATATGGCCTGCACCAAGAGGGCCACCTCCTC...AAAAGTCATGGTTAGATTGTGAATTTCAGTGCCATGTAAGGTGCCTTTAGAGTC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000064240.14 ENSMUST00000101499.10 ENSMUST00000185739.8 |
||
| CDS-3UTR CAA 90 bp | TTGAGAGACAAGACTTGTGTTAATAGCTACCTCAAAAGAGGTAGTTTTCCTTCCGAGGAGGTGGCCCTCTaGGTGCAGGCCATATACCAG | + |
|
Preference number: 5 (lower is better) Translates to: LRDKTCVNSYLKRGSFPSEEVAL*VQAIYQ Trigger: CTGGTATATGGCCTGCACCAAGAGGGCCACCTCCTC...GGAAGGAAAACTACCTCTTTTGAGGTAGCTATTAACACAAGTCTTGTCTCTCAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000064240.14 ENSMUST00000101499.10 ENSMUST00000185739.8 ENSMUST00000188326.3 |
||
| CDS-3UTR CAA 90 bp | ACAAGACTTGTGTTAATAGCTACCTCAAAAGAGGTAGTTTTCCTTCCACAGTCAGGGGAGGGTGTGGCATaGGATGGCTTATTGGTGGTG | + |
|
Preference number: 5 (lower is better) Translates to: TRLVLIATSKEVVFLPQSGEGVA*DGLLVV Trigger: CACCACCAATAAGCCATCCAATGCCACACCCTCCCC...TGACTGTGGAAGGAAAACTACCTCTTTTGAGGTAGCTATTAACACAAGTCTTGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000064240.14 ENSMUST00000101499.10 ENSMUST00000185739.8 |
||
| CDS-3UTR CAA 90 bp | GTTAATAGCTACCTCAAAAGAGGTAGTTTTCCTTCCACAGTCAAAGGTCAATTAGTGGAGCAGAGGTCATaGGTGGAGGTGGAGCTTGGC | + |
|
Preference number: 5 (lower is better) Translates to: VNSYLKRGSFPSTVKGQLVEQRS*VEVELG Trigger: GCCAAGCTCCACCTCCACCAATGACCTCTGCTCCAC...TAATTGACCTTTGACTGTGGAAGGAAAACTACCTCTTTTGAGGTAGCTATTAAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000064240.14 ENSMUST00000101499.10 ENSMUST00000185739.8 |
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| CDS-3UTR CAA 90 bp | AATAGCTACCTCAAAAGAGGTAGTTTTCCTTCCACAGTCAAAGGTCAATTAAGAGAGGAGGTGGCCCTCTaGGTGCAGGCCATATACCAG | + |
|
Preference number: 5 (lower is better) Translates to: NSYLKRGSFPSTVKGQLREEVAL*VQAIYQ Trigger: CTGGTATATGGCCTGCACCAAGAGGGCCACCTCCTC...TCTTAATTGACCTTTGACTGTGGAAGGAAAACTACCTCTTTTGAGGTAGCTATT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000064240.14 ENSMUST00000101499.10 ENSMUST00000185739.8 ENSMUST00000188326.3 |
||
| CDS-3UTR CAA 90 bp | ATGATTTTGTATCTGATCATCCACCATGAGAATGTTTTCCTGTACCTGACAGAAGAGGAGGTGGCCCTCTaGGTGCAGGCCATATACCAG | + |
|
Preference number: 5 (lower is better) Translates to: MILYLIIHHENVFLYLTEEEVAL*VQAIYQ Trigger: CTGGTATATGGCCTGCACCAAGAGGGCCACCTCCTC...TTCTGTCAGGTACAGGAAAACATTCTCATGGTGGATGATCAGATACAAAATCAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000064240.14 ENSMUST00000101499.10 ENSMUST00000185739.8 |
||
| CDS-3UTR CAA 90 bp | AATAGCTACCTCAAAAGAGGTAGTTTTCCTTCCACAGTCAAAGGTCAATTAAGAGCATTGGATGGCTTATaGGTGGTGGAGGAGGTGGGG | + |
|
Preference number: 5 (lower is better) Translates to: NSYLKRGSFPSTVKGQLRALDGL*VVEEVG Trigger: CCCCACCTCCTCCACCACCAATAAGCCATCCAATGC...TCTTAATTGACCTTTGACTGTGGAAGGAAAACTACCTCTTTTGAGGTAGCTATT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000064240.14 ENSMUST00000101499.10 ENSMUST00000185739.8 |
||
| CDS-3UTR CAA 90 bp | AAAGTAACAGTTAAGATAGAATTGTGCTCAACCAAGCCACTTATCTGCACTACAGCATTGGATGGCTTATaGGTGGTGGAGGAGGTGGGG | + |
|
Preference number: 5 (lower is better) Translates to: KVTVKIELCSTKPLICTTALDGL*VVEEVG Trigger: CCCCACCTCCTCCACCACCAATAAGCCATCCAATGC...TGTAGTGCAGATAAGTGGCTTGGTTGAGCACAATTCTATCTTAACTGTTACTTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000064240.14 ENSMUST00000101499.10 ENSMUST00000185739.8 |
||
| CDS-3UTR CAA 90 bp | AATAGCTACCTCAAAAGAGGTAGTTTTCCTTCCACAGTCAAAGGTCAATTAAGAGGGGAGGGTGTGGCATaGGATGGCTTATTGGTGGTG | + |
|
Preference number: 5 (lower is better) Translates to: NSYLKRGSFPSTVKGQLRGEGVA*DGLLVV Trigger: CACCACCAATAAGCCATCCAATGCCACACCCTCCCC...TCTTAATTGACCTTTGACTGTGGAAGGAAAACTACCTCTTTTGAGGTAGCTATT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000064240.14 ENSMUST00000101499.10 ENSMUST00000185739.8 |
||
| CDS-3UTR CAA 90 bp | ACAAGACTTGTGTTAATAGCTACCTCAAAAGAGGTAGTTTTCCTTCCACAGTCAAAATCCTTCATCACCTaGCGGGGCCTTTGCGGGCAT | + |
|
Preference number: 5 (lower is better) Translates to: TRLVLIATSKEVVFLPQSKSFIT*RGLCGH Trigger: ATGCCCGCAAAGGCCCCGCAAGGTGATGAAGGATTT...TGACTGTGGAAGGAAAACTACCTCTTTTGAGGTAGCTATTAACACAAGTCTTGT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENSMUST00000185739.8 |
||
| CDS-3UTR CAA 90 bp | GACTCTAAAGGCACCTTACATGGCACTGAAATTCACAATCTAACCATGACTTTTGGTGCCGGCTTAACTTaGCTGGCTTGTTTGGAGATG | + |
|
Preference number: 5 (lower is better) Translates to: DSKGTLHGTEIHNLTMTFGAGLT*LACLEM Trigger: CATCTCCAAACAAGCCAGCAAAGTTAAGCCGGCACC...AAAAGTCATGGTTAGATTGTGAATTTCAGTGCCATGTAAGGTGCCTTTAGAGTC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000064240.14 ENSMUST00000101499.10 ENSMUST00000185739.8 |
||
| CDS-3UTR CAA 90 bp | TTGAGAGACAAGACTTGTGTTAATAGCTACCTCAAAAGAGGTAGTTTTCCTTCCGGTGCCGGCTTAACTTaGCTGGCTTGTTTGGAGATG | + |
|
Preference number: 5 (lower is better) Translates to: LRDKTCVNSYLKRGSFPSGAGLT*LACLEM Trigger: CATCTCCAAACAAGCCAGCAAAGTTAAGCCGGCACC...GGAAGGAAAACTACCTCTTTTGAGGTAGCTATTAACACAAGTCTTGTCTCTCAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000064240.14 ENSMUST00000101499.10 ENSMUST00000185739.8 ENSMUST00000188326.3 |
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| CDS-3UTR CAA 90 bp | CTTGTGTTAATAGCTACCTCAAAAGAGGTAGTTTTCCTTCCACAGTCAAAGGTCGGGTGGTGCGTAATGTaGCTGTGGAGGCATAATATG | + |
|
Preference number: 5 (lower is better) Translates to: LVLIATSKEVVFLPQSKVGWCVM*LWRHNM Trigger: CATATTATGCCTCCACAGCAACATTACGCACCACCC...GACCTTTGACTGTGGAAGGAAAACTACCTCTTTTGAGGTAGCTATTAACACAAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000064240.14 ENSMUST00000101499.10 ENSMUST00000185739.8 |
||
| CDS-3UTR CAA 90 bp | TTAAAATTCTATTACAAAACATTCATCTGGCCTGCCTCCCAGCATAATGGTTTTGCATTGGATGGCTTATaGGTGGTGGAGGAGGTGGGG | + |
|
Preference number: 5 (lower is better) Translates to: LKFYYKTFIWPASQHNGFALDGL*VVEEVG Trigger: CCCCACCTCCTCCACCACCAATAAGCCATCCAATGC...AAAACCATTATGCTGGGAGGCAGGCCAGATGAATGTTTTGTAATAGAATTTTAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000064240.14 ENSMUST00000101499.10 ENSMUST00000185739.8 |
||
| CDS-3UTR CAA 90 bp | TTAAAATTCTATTACAAAACATTCATCTGGCCTGCCTCCCAGCATAATGGTTTTGGGGAGGGTGTGGCATaGGATGGCTTATTGGTGGTG | + |
|
Preference number: 5 (lower is better) Translates to: LKFYYKTFIWPASQHNGFGEGVA*DGLLVV Trigger: CACCACCAATAAGCCATCCAATGCCACACCCTCCCC...AAAACCATTATGCTGGGAGGCAGGCCAGATGAATGTTTTGTAATAGAATTTTAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 3 transcripts: ENSMUST00000064240.14 ENSMUST00000101499.10 ENSMUST00000185739.8 |
||
| CDS-3UTR CAA 90 bp | ACAAGACTTGTGTTAATAGCTACCTCAAAAGAGGTAGTTTTCCTTCCACAGTCATGGTGGAGGTGGAGCTaGGCTATATACCAAGTGAGG | + |
|
Preference number: 5 (lower is better) Translates to: TRLVLIATSKEVVFLPQSWWRWS*AIYQVR Trigger: CCTCACTTGGTATATAGCCAAGCTCCACCTCCACCA...TGACTGTGGAAGGAAAACTACCTCTTTTGAGGTAGCTATTAACACAAGTCTTGT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000064240.14 ENSMUST00000101499.10 ENSMUST00000185739.8 |
||
| CDS-3UTR CAA 90 bp | AAAGTAACAGTTAAGATAGAATTGTGCTCAACCAAGCCACTTATCTGCACTACAGGTGCCGGCTTAACTTaGCTGGCTTGTTTGGAGATG | + |
|
Preference number: 5 (lower is better) Translates to: KVTVKIELCSTKPLICTTGAGLT*LACLEM Trigger: CATCTCCAAACAAGCCAGCAAAGTTAAGCCGGCACC...TGTAGTGCAGATAAGTGGCTTGGTTGAGCACAATTCTATCTTAACTGTTACTTT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000064240.14 ENSMUST00000101499.10 ENSMUST00000185739.8 ENSMUST00000188326.3 |
||
| CDS-3UTR CAA 90 bp | AATAGCTACCTCAAAAGAGGTAGTTTTCCTTCCACAGTCAAAGGTCAATTAAGAGGTGCCGGCTTAACTTaGCTGGCTTGTTTGGAGATG | + |
|
Preference number: 5 (lower is better) Translates to: NSYLKRGSFPSTVKGQLRGAGLT*LACLEM Trigger: CATCTCCAAACAAGCCAGCAAAGTTAAGCCGGCACC...TCTTAATTGACCTTTGACTGTGGAAGGAAAACTACCTCTTTTGAGGTAGCTATT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000064240.14 ENSMUST00000101499.10 ENSMUST00000185739.8 ENSMUST00000188326.3 |
||
| CDS-3UTR CAA 90 bp | AAAGTAACAGTTAAGATAGAATTGTGCTCAACCAAGCCACTTATCTGCACTACATGGTGGAGGTGGAGCTaGGCTATATACCAAGTGAGG | + |
|
Preference number: 5 (lower is better) Translates to: KVTVKIELCSTKPLICTTWWRWS*AIYQVR Trigger: CCTCACTTGGTATATAGCCAAGCTCCACCTCCACCA...TGTAGTGCAGATAAGTGGCTTGGTTGAGCACAATTCTATCTTAACTGTTACTTT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000064240.14 ENSMUST00000101499.10 ENSMUST00000185739.8 |
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| CDS-3UTR CAA 90 bp | ATGATTTTGTATCTGATCATCCACCATGAGAATGTTTTCCTGTACCTGACAGAATGGTGGAGGTGGAGCTaGGCTATATACCAAGTGAGG | + |
|
Preference number: 5 (lower is better) Translates to: MILYLIIHHENVFLYLTEWWRWS*AIYQVR Trigger: CCTCACTTGGTATATAGCCAAGCTCCACCTCCACCA...TTCTGTCAGGTACAGGAAAACATTCTCATGGTGGATGATCAGATACAAAATCAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000064240.14 ENSMUST00000101499.10 ENSMUST00000185739.8 |
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| CDS-3UTR CAA 90 bp | GTTAATAGCTACCTCAAAAGAGGTAGTTTTCCTTCCACAGTCAAAGGTCAATTAAGGGCTCAGAGTTCCTaGGTCTTCAGTAAACTGGGG | + |
|
Preference number: 5 (lower is better) Translates to: VNSYLKRGSFPSTVKGQLRAQSS*VFSKLG Trigger: CCCCAGTTTACTGAAGACCAAGGAACTCTGAGCCCT...TAATTGACCTTTGACTGTGGAAGGAAAACTACCTCTTTTGAGGTAGCTATTAAC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000064240.14 ENSMUST00000101499.10 ENSMUST00000185739.8 |
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| CDS-3UTR CAA 90 bp | AATAGCTACCTCAAAAGAGGTAGTTTTCCTTCCACAGTCAAAGGTCAATTAAGAAGGGCTCAGAGTTCCTaGGTCTTCAGTAAACTGGGG | + |
|
Preference number: 5 (lower is better) Translates to: NSYLKRGSFPSTVKGQLRRAQSS*VFSKLG Trigger: CCCCAGTTTACTGAAGACCAAGGAACTCTGAGCCCT...TCTTAATTGACCTTTGACTGTGGAAGGAAAACTACCTCTTTTGAGGTAGCTATT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000064240.14 ENSMUST00000101499.10 ENSMUST00000185739.8 |
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| CDS-3UTR CAA 90 bp | TTGAGAGACAAGACTTGTGTTAATAGCTACCTCAAAAGAGGTAGTTTTCCTTCCACTCATTCCTCCTGGTaGTGTAAATGGAGGGCTCAG | + |
|
Preference number: 5 (lower is better) Translates to: LRDKTCVNSYLKRGSFPSTHSSW*CKWRAQ Trigger: CTGAGCCCTCCATTTACACAACCAGGAGGAATGAGT...GGAAGGAAAACTACCTCTTTTGAGGTAGCTATTAACACAAGTCTTGTCTCTCAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000064240.14 ENSMUST00000101499.10 ENSMUST00000185739.8 ENSMUST00000188326.3 |
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| CDS-3UTR CAA 90 bp | ATGATTTTGTATCTGATCATCCACCATGAGAATGTTTTCCTGTACCTGACAGAAGGGTGGTGCGTAATGTaGCTGTGGAGGCATAATATG | + |
|
Preference number: 5 (lower is better) Translates to: MILYLIIHHENVFLYLTEGWCVM*LWRHNM Trigger: CATATTATGCCTCCACAGCAACATTACGCACCACCC...TTCTGTCAGGTACAGGAAAACATTCTCATGGTGGATGATCAGATACAAAATCAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000064240.14 ENSMUST00000101499.10 ENSMUST00000185739.8 |
||
| CDS-3UTR CAA 90 bp | AAAGTAACAGTTAAGATAGAATTGTGCTCAACCAAGCCACTTATCTGCACTACAGGGTGGTGCGTAATGTaGCTGTGGAGGCATAATATG | + |
|
Preference number: 5 (lower is better) Translates to: KVTVKIELCSTKPLICTTGWCVM*LWRHNM Trigger: CATATTATGCCTCCACAGCAACATTACGCACCACCC...TGTAGTGCAGATAAGTGGCTTGGTTGAGCACAATTCTATCTTAACTGTTACTTT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000064240.14 ENSMUST00000101499.10 ENSMUST00000185739.8 |
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| CDS-3UTR CAA 90 bp | ATGATTTTGTATCTGATCATCCACCATGAGAATGTTTTCCTGTACCTGACAGAAACTCATTCCTCCTGGTaGTGTAAATGGAGGGCTCAG | + |
|
Preference number: 5 (lower is better) Translates to: MILYLIIHHENVFLYLTETHSSW*CKWRAQ Trigger: CTGAGCCCTCCATTTACACAACCAGGAGGAATGAGT...TTCTGTCAGGTACAGGAAAACATTCTCATGGTGGATGATCAGATACAAAATCAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000064240.14 ENSMUST00000101499.10 ENSMUST00000185739.8 |
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| CDS-3UTR CAA 90 bp | AAAGTAACAGTTAAGATAGAATTGTGCTCAACCAAGCCACTTATCTGCACTACAACTCATTCCTCCTGGTaGTGTAAATGGAGGGCTCAG | + |
|
Preference number: 5 (lower is better) Translates to: KVTVKIELCSTKPLICTTTHSSW*CKWRAQ Trigger: CTGAGCCCTCCATTTACACAACCAGGAGGAATGAGT...TGTAGTGCAGATAAGTGGCTTGGTTGAGCACAATTCTATCTTAACTGTTACTTT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000064240.14 ENSMUST00000101499.10 ENSMUST00000185739.8 ENSMUST00000188326.3 |
||
| CDS-3UTR CAA 90 bp | AATAGCTACCTCAAAAGAGGTAGTTTTCCTTCCACAGTCAAAGGTCAATTAAGAAGGGCTCAGAGTTCCTaGGTCTTCAGTAAACGAACG | + |
|
Preference number: 5 (lower is better) Translates to: NSYLKRGSFPSTVKGQLRRAQSS*VFSKRT Trigger: CGTTCGTTTACTGAAGACCAAGGAACTCTGAGCCCT...TCTTAATTGACCTTTGACTGTGGAAGGAAAACTACCTCTTTTGAGGTAGCTATT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000188326.3 |
||
| CDS-3UTR CAA 90 bp | TTAAAATTCTATTACAAAACATTCATCTGGCCTGCCTCCCAGCATAATGGTTTTACTCATTCCTCCTGGTaGTGTAAATGGAGGGCTCAG | + |
|
Preference number: 5 (lower is better) Translates to: LKFYYKTFIWPASQHNGFTHSSW*CKWRAQ Trigger: CTGAGCCCTCCATTTACACAACCAGGAGGAATGAGT...AAAACCATTATGCTGGGAGGCAGGCCAGATGAATGTTTTGTAATAGAATTTTAA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000064240.14 ENSMUST00000101499.10 ENSMUST00000185739.8 |
||
| CDS-3UTR CAA 90 bp | ATGATTTTGTATCTGATCATCCACCATGAGAATGTTTTCCTGTACCTGACAGAAACTTTGCTGGCTTGTTaGGAGATGAGCTTTATAGGG | + |
|
Preference number: 5 (lower is better) Translates to: MILYLIIHHENVFLYLTETLLAC*EMSFIG Trigger: CCCTATAAAGCTCATCTCCAAACAAGCCAGCAAAGT...TTCTGTCAGGTACAGGAAAACATTCTCATGGTGGATGATCAGATACAAAATCAT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000064240.14 ENSMUST00000101499.10 ENSMUST00000185739.8 |
||
| CDS-3UTR CAA 90 bp | AATAGCTACCTCAAAAGAGGTAGTTTTCCTTCCACAGTCAAAGGTCAATTAAGAACTTTGCTGGCTTGTTaGGAGATGAGCTTTATAGGG | + |
|
Preference number: 5 (lower is better) Translates to: NSYLKRGSFPSTVKGQLRTLLAC*EMSFIG Trigger: CCCTATAAAGCTCATCTCCAAACAAGCCAGCAAAGT...TCTTAATTGACCTTTGACTGTGGAAGGAAAACTACCTCTTTTGAGGTAGCTATT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000064240.14 ENSMUST00000101499.10 ENSMUST00000185739.8 ENSMUST00000188326.3 |
||
| CDS-3UTR CAA 90 bp | AAAGTAACAGTTAAGATAGAATTGTGCTCAACCAAGCCACTTATCTGCACTACAACTTTGCTGGCTTGTTaGGAGATGAGCTTTATAGGG | + |
|
Preference number: 5 (lower is better) Translates to: KVTVKIELCSTKPLICTTTLLAC*EMSFIG Trigger: CCCTATAAAGCTCATCTCCAAACAAGCCAGCAAAGT...TGTAGTGCAGATAAGTGGCTTGGTTGAGCACAATTCTATCTTAACTGTTACTTT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000064240.14 ENSMUST00000101499.10 ENSMUST00000185739.8 ENSMUST00000188326.3 |
||
| CDS-3UTR CAA 90 bp | GTTAATAGCTACCTCAAAAGAGGTAGTTTTCCTTCCACAGTCAAAGGTCAATTACTTAACTTTGCTGGCTaGTTTGGAGATGAGCTTTAT | + |
|
Preference number: 5 (lower is better) Translates to: VNSYLKRGSFPSTVKGQLLNFAG*FGDELY Trigger: ATAAAGCTCATCTCCAAACAAGCCAGCAAAGTTAAG...TAATTGACCTTTGACTGTGGAAGGAAAACTACCTCTTTTGAGGTAGCTATTAAC 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000064240.14 ENSMUST00000101499.10 ENSMUST00000185739.8 ENSMUST00000188326.3 |
||
| CDS-3UTR CAA 90 bp | TTAAAATTCTATTACAAAACATTCATCTGGCCTGCCTCCCAGCATAATGGTTTTCTTAACTTTGCTGGCTaGTTTGGAGATGAGCTTTAT | + |
|
Preference number: 5 (lower is better) Translates to: LKFYYKTFIWPASQHNGFLNFAG*FGDELY Trigger: ATAAAGCTCATCTCCAAACAAGCCAGCAAAGTTAAG...AAAACCATTATGCTGGGAGGCAGGCCAGATGAATGTTTTGTAATAGAATTTTAA 37% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000064240.14 ENSMUST00000101499.10 ENSMUST00000185739.8 |
||
| CDS GCA 72 bp | GCCCTGCATTCGTGGAGGAGGAGGTGGCCCTCTTGGTaGAGGCCATATACCAGGACTCATTCCTCCTGGTTG | + |
|
Preference number: 6 (lower is better) Translates to: ALHSWRRRWPSW*RPYTRTHSSWL Trigger: CAACCAGGAGGAATGAGTCCTGGTATATGGCCTGCACCAAGAGGGCCACCTCCTCCTCCACGAATGCAGGGC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000064240.14 ENSMUST00000085487.12 ENSMUST00000101499.10 ENSMUST00000185739.8 ENSMUST00000188326.3 |
||
| CDS CCA 72 bp | AGCCTGGGGAGGGTGTGGCATTGGATGGCTTATTGGTaGTGGAGGAGGTGGGGGTGGTGCGTAATGTTGCTG | + |
|
Preference number: 6 (lower is better) Translates to: SLGRVWHWMAYW*WRRWGWCVMLL Trigger: CAGCAACATTACGCACCACCCCCACCTCCTCCACCACCAATAAGCCATCCAATGCCACACCCTCCCCAGGCT 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000064240.14 ENSMUST00000101499.10 ENSMUST00000185739.8 |
||
| CDS CCA 72 bp | TGCAGCCTGGGGAGGGTGTGGCATTGGATGGCTTATTaGTGGTGGAGGAGGTGGGGGTGGTGCGTAATGTTG | + |
|
Preference number: 6 (lower is better) Translates to: CSLGRVWHWMAY*WWRRWGWCVML Trigger: CAACATTACGCACCACCCCCACCTCCTCCACCACCAATAAGCCATCCAATGCCACACCCTCCCCAGGCTGCA 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000064240.14 ENSMUST00000101499.10 ENSMUST00000185739.8 |
||
| CDS CCA 72 bp | AGGATTGTAATGGTGAGGAGGGGGTGCAGTTACAGGTaGACCACCATGCTGAGGTGGAGGGGGTCCTGGAGG | + |
|
Preference number: 6 (lower is better) Translates to: RIVMVRRGCSYR*TTMLRWRGSWR Trigger: CCTCCAGGACCCCCTCCACCTCAGCATGGTGGTCCACCTGTAACTGCACCCCCTCCTCACCATTACAATCCT 60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 3 transcripts: ENSMUST00000064240.14 ENSMUST00000101499.10 ENSMUST00000185739.8 |
||
| CDS CAA 90 bp | TTCATCACCTTGCGGGGCCTTTGCGGGCATCCTGCTGACAGTCCTTaGAGTCCGAGGTGCCGGCTTAACTTTGCTGGCTTGTTTGGAGAT | + |
|
Preference number: 6 (lower is better) Translates to: FITLRGLCGHPADSP*SPRCRLNFAGLFGD Trigger: ATCTCCAAACAAGCCAGCAAAGTTAAGCCGGCACCTCGGACTCAAAGGACTGTCAGCAGGATGCCCGCAAAGGCCCCGCAAGGTGATGAA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000085487.12 ENSMUST00000101499.10 ENSMUST00000185739.8 |
||
| CDS GCA 72 bp | TGCGGGCATCCTGCTGACAGTCCTTTGAGTCCGAGGTaGCGGCTTAACTTTGCTGGCTTGTTTGGAGATGAG | + |
|
Preference number: 6 (lower is better) Translates to: CGHPADSPLSPR*RLNFAGLFGDE Trigger: CTCATCTCCAAACAAGCCAGCAAAGTTAAGCCGGCACCTCGGACTCAAAGGACTGTCAGCAGGATGCCCGCA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000064240.14 ENSMUST00000085487.12 ENSMUST00000101499.10 ENSMUST00000185739.8 ENSMUST00000188326.3 |
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| CDS CAA 90 bp | AAATCCTTCTTGCGGGGCCTTTGCGGGCATCCTGCTGACAGTCCTTaGAGTCCGAGGTGCCGGCTTAACTTTGCTGGCTTGTTTGGAGAT | + |
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Preference number: 6 (lower is better) Translates to: KSFLRGLCGHPADSP*SPRCRLNFAGLFGD Trigger: ATCTCCAAACAAGCCAGCAAAGTTAAGCCGGCACCTCGGACTCAAAGGACTGTCAGCAGGATGCCCGCAAAGGCCCCGCAAGAAGGATTT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000064240.14 |
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| CDS CAA 90 bp | ATCAAATCCTTGCGGGGCCTTTGCGGGCATCCTGCTGACAGTCCTTaGAGTCCGAGGTGCCGGCTTAACTTTGCTGGCTTGTTTGGAGAT | + |
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Preference number: 6 (lower is better) Translates to: IKSLRGLCGHPADSP*SPRCRLNFAGLFGD Trigger: ATCTCCAAACAAGCCAGCAAAGTTAAGCCGGCACCTCGGACTCAAAGGACTGTCAGCAGGATGCCCGCAAAGGCCCCGCAAGGATTTGAT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000188326.3 |
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| CDS CCA 72 bp | GTGTGGCATTGGATGGCTTATTGGTGGTGGAGGAGGTaGGGGTGGTGCGTAATGTTGCTGTGGAGGCATAAT | + |
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Preference number: 6 (lower is better) Translates to: VWHWMAYWWWRR*GWCVMLLWRHN Trigger: ATTATGCCTCCACAGCAACATTACGCACCACCCCCACCTCCTCCACCACCAATAAGCCATCCAATGCCACAC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000064240.14 ENSMUST00000101499.10 ENSMUST00000185739.8 |
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| CDS GCA 72 bp | GTTATAATCAAATCCTTCATCACCTTGCGGGGCCTTTaGGGGCATCCTGCTGACAGTCCTTTGAGTCCGAGG | + |
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Preference number: 6 (lower is better) Translates to: VIIKSFITLRGL*GHPADSPLSPR Trigger: CCTCGGACTCAAAGGACTGTCAGCAGGATGCCCGCAAAGGCCCCGCAAGGTGATGAAGGATTTGATTATAAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000185739.8 |
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| CDS GCA 72 bp | CTGTTCTTCGTTATAATCAAATCCTTGCGGGGCCTTTaGGGGCATCCTGCTGACAGTCCTTTGAGTCCGAGG | + |
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Preference number: 6 (lower is better) Translates to: LFFVIIKSLRGL*GHPADSPLSPR Trigger: CCTCGGACTCAAAGGACTGTCAGCAGGATGCCCGCAAAGGCCCCGCAAGGATTTGATTATAACGAAGAACAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000188326.3 |
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| CDS CAA 90 bp | TGGCCCTCTTGGTGCAGGCCATATACCAGGACTCATTCCTCCTGGTaGTGTAAATGGAGGGCTCAGAGTTCCTTGGTCTTCAGTAAACTG | + |
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Preference number: 6 (lower is better) Translates to: WPSWCRPYTRTHSSW*CKWRAQSSLVFSKL Trigger: CAGTTTACTGAAGACCAAGGAACTCTGAGCCCTCCATTTACACAACCAGGAGGAATGAGTCCTGGTATATGGCCTGCACCAAGAGGGCCA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000064240.14 ENSMUST00000085487.12 ENSMUST00000101499.10 ENSMUST00000185739.8 |
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| CDS CAA 90 bp | GCCTCCTTTACAGTCATATCGCTGTTCTTCGTTATAATCAAATCCTaGCGGGGCCTTTGCGGGCATCCTGCTGACAGTCCTTTGAGTCCG | + |
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Preference number: 6 (lower is better) Translates to: ASFTVISLFFVIIKS*RGLCGHPADSPLSP Trigger: CGGACTCAAAGGACTGTCAGCAGGATGCCCGCAAAGGCCCCGCAAGGATTTGATTATAACGAAGAACAGCGATATGACTGTAAAGGAGGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000188326.3 |
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| CDS CAA 90 bp | TGGCCCTCTTGGTGCAGGCCATATACCAGGACTCATTCCTCCTGGTaGTGTAAATGGAGGGCTCAGAGTTCCTTGGTCTTCAGTAAACGA | + |
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Preference number: 6 (lower is better) Translates to: WPSWCRPYTRTHSSW*CKWRAQSSLVFSKR Trigger: TCGTTTACTGAAGACCAAGGAACTCTGAGCCCTCCATTTACACAACCAGGAGGAATGAGTCCTGGTATATGGCCTGCACCAAGAGGGCCA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000188326.3 |
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| CDS GCA 72 bp | TTCTTCGTTATAATCAAATCCTTCTTGCGGGGCCTTTaGGGGCATCCTGCTGACAGTCCTTTGAGTCCGAGG | + |
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Preference number: 6 (lower is better) Translates to: FFVIIKSFLRGL*GHPADSPLSPR Trigger: CCTCGGACTCAAAGGACTGTCAGCAGGATGCCCGCAAAGGCCCCGCAAGAAGGATTTGATTATAACGAAGAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000064240.14 |
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| CDS CAA 72 bp | TGGTGCAGGCCATATACCAGGACTCATTCCTCCTGGTaGTGTAAATGGAGGGCTCAGAGTTCCTTGGTCTTC | + |
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Preference number: 6 (lower is better) Translates to: WCRPYTRTHSSW*CKWRAQSSLVF Trigger: GAAGACCAAGGAACTCTGAGCCCTCCATTTACACAACCAGGAGGAATGAGTCCTGGTATATGGCCTGCACCA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000064240.14 ENSMUST00000085487.12 ENSMUST00000101499.10 ENSMUST00000185739.8 ENSMUST00000188326.3 |
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| CDS CAA 72 bp | TCGCTGTTCTTCGTTATAATCAAATCCTTCATCACCTaGCGGGGCCTTTGCGGGCATCCTGCTGACAGTCCT | + |
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Preference number: 6 (lower is better) Translates to: SLFFVIIKSFIT*RGLCGHPADSP Trigger: AGGACTGTCAGCAGGATGCCCGCAAAGGCCCCGCAAGGTGATGAAGGATTTGATTATAACGAAGAACAGCGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000185739.8 |
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| CDS CAA 90 bp | GTCATATCGCTGTTCTTCGTTATAATCAAATCCTTCTTCATCACCTaGCGGGGCCTTTGCGGGCATCCTGCTGACAGTCCTTTGAGTCCG | + |
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Preference number: 6 (lower is better) Translates to: VISLFFVIIKSFFIT*RGLCGHPADSPLSP Trigger: CGGACTCAAAGGACTGTCAGCAGGATGCCCGCAAAGGCCCCGCAAGGTGATGAAGAAGGATTTGATTATAACGAAGAACAGCGATATGAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000085487.12 ENSMUST00000101499.10 |
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| CDS GCA 72 bp | ACAATGCTACACATAAAGAGAGAACCTCGTGTGCACTaGTCAATCCGCTGCACAGGATCACTACATCCTGGG | + |
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Preference number: 6 (lower is better) Translates to: TMLHIKREPRVH*SIRCTGSLHPG Trigger: CCCAGGATGTAGTGATCCTGTGCAGCGGATTGAGCAGTGCACACGAGGTTCTCTCTTTATGTGTAGCATTGT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000064240.14 ENSMUST00000085487.12 ENSMUST00000101499.10 ENSMUST00000185739.8 ENSMUST00000188326.3 |
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| CDS CCA 72 bp | AGGATTGTAATGGTGAGGAGGGGGTGCAGTTACAGGTaGACCACCATGATAAGGTGGCATCTGGGCAATAAT | + |
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Preference number: 6 (lower is better) Translates to: RIVMVRRGCSYR*TTMIRWHLGNN Trigger: ATTATTGCCCAGATGCCACCTTATCATGGTGGTCCACCTGTAACTGCACCCCCTCCTCACCATTACAATCCT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000085487.12 |
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| CDS CAA 72 bp | CCTTTGAGTCCGAGGTGCCGGCTTAACTTTGCTGGCTaGTTTGGAGATGAGCTTTATAGGGATTCTTCTGCG | + |
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Preference number: 6 (lower is better) Translates to: PLSPRCRLNFAG*FGDELYRDSSA Trigger: CGCAGAAGAATCCCTATAAAGCTCATCTCCAAACAAGCCAGCAAAGTTAAGCCGGCACCTCGGACTCAAAGG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000064240.14 ENSMUST00000085487.12 ENSMUST00000101499.10 ENSMUST00000185739.8 ENSMUST00000188326.3 |
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| CDS CAA 72 bp | GTCATATCGCTGTTCTTCGTTATAATCAAATCCTTCTaGCGGGGCCTTTGCGGGCATCCTGCTGACAGTCCT | + |
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Preference number: 6 (lower is better) Translates to: VISLFFVIIKSF*RGLCGHPADSP Trigger: AGGACTGTCAGCAGGATGCCCGCAAAGGCCCCGCAAGAAGGATTTGATTATAACGAAGAACAGCGATATGAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000064240.14 |
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| CDS CAA 72 bp | CTGTTCTTCGTTATAATCAAATCCTTCTTCATCACCTaGCGGGGCCTTTGCGGGCATCCTGCTGACAGTCCT | + |
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Preference number: 6 (lower is better) Translates to: LFFVIIKSFFIT*RGLCGHPADSP Trigger: AGGACTGTCAGCAGGATGCCCGCAAAGGCCCCGCAAGGTGATGAAGAAGGATTTGATTATAACGAAGAACAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000085487.12 ENSMUST00000101499.10 |
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| CDS CAA 72 bp | ACAGTCATATCGCTGTTCTTCGTTATAATCAAATCCTaGCGGGGCCTTTGCGGGCATCCTGCTGACAGTCCT | + |
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Preference number: 6 (lower is better) Translates to: TVISLFFVIIKS*RGLCGHPADSP Trigger: AGGACTGTCAGCAGGATGCCCGCAAAGGCCCCGCAAGGATTTGATTATAACGAAGAACAGCGATATGACTGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000188326.3 |
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| CDS CAA 90 bp | GCTGACAGTCCTTTGAGTCCGAGGTGCCGGCTTAACTTTGCTGGCTaGTTTGGAGATGAGCTTTATAGGGATTCTTCTGCGAACATCAAG | + |
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Preference number: 6 (lower is better) Translates to: ADSPLSPRCRLNFAG*FGDELYRDSSANIK Trigger: CTTGATGTTCGCAGAAGAATCCCTATAAAGCTCATCTCCAAACAAGCCAGCAAAGTTAAGCCGGCACCTCGGACTCAAAGGACTGTCAGC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000064240.14 ENSMUST00000085487.12 ENSMUST00000101499.10 ENSMUST00000185739.8 ENSMUST00000188326.3 |
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| CDS CAA 90 bp | TCCTTTACAGTCATATCGCTGTTCTTCGTTATAATCAAATCCTTCTaGCGGGGCCTTTGCGGGCATCCTGCTGACAGTCCTTTGAGTCCG | + |
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Preference number: 6 (lower is better) Translates to: SFTVISLFFVIIKSF*RGLCGHPADSPLSP Trigger: CGGACTCAAAGGACTGTCAGCAGGATGCCCGCAAAGGCCCCGCAAGAAGGATTTGATTATAACGAAGAACAGCGATATGACTGTAAAGGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000064240.14 |
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| CDS CCA 72 bp | CCATATACCAGGACTCATTCCTCCTGGTTGTGTAAATaGAGGGCTCAGAGTTCCTTGGTCTTCAGTAAACTG | + |
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Preference number: 6 (lower is better) Translates to: PYTRTHSSWLCK*RAQSSLVFSKL Trigger: CAGTTTACTGAAGACCAAGGAACTCTGAGCCCTCCATTTACACAACCAGGAGGAATGAGTCCTGGTATATGG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000064240.14 ENSMUST00000085487.12 ENSMUST00000101499.10 ENSMUST00000185739.8 |
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| CDS CCA 72 bp | CCATATACCAGGACTCATTCCTCCTGGTTGTGTAAATaGAGGGCTCAGAGTTCCTTGGTCTTCAGTAAACGA | + |
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Preference number: 6 (lower is better) Translates to: PYTRTHSSWLCK*RAQSSLVFSKR Trigger: TCGTTTACTGAAGACCAAGGAACTCTGAGCCCTCCATTTACACAACCAGGAGGAATGAGTCCTGGTATATGG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000188326.3 |
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| CDS TCA 72 bp | GGTGGTGGTTCTCTAGCACCTGAACTGGAGTCATCCTaGATAGGGACCGTTATTAAATTGCTGTGTTTTCTT | + |
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Preference number: 6 (lower is better) Translates to: GGGSLAPELESS*IGTVIKLLCFL Trigger: AAGAAAACACAGCAATTTAATAACGGTCCCTATTCAGGATGACTCCAGTTCAGGTGCTAGAGAACCACCACC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000064240.14 ENSMUST00000101499.10 ENSMUST00000185739.8 |
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| CDS TCA 72 bp | GGAGGTGGTTCTCTAGCACCTGAACTGGAGTCATCCTaGATAGGGACCGTTATTAAATTGCTGTGTTTTCTT | + |
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Preference number: 6 (lower is better) Translates to: GGGSLAPELESS*IGTVIKLLCFL Trigger: AAGAAAACACAGCAATTTAATAACGGTCCCTATTCAGGATGACTCCAGTTCAGGTGCTAGAGAACCACCTCC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000085487.12 |
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