Pregenerated sensors for CBLC (Mus musculus)
Ensembl gene IDs: ENSMUSG00000040525Ensembl transcript IDs: ENSMUST00000043822.8, ENSMUST00000108449.9
Found 125 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR-3UTR CCA 90 bp | CCAGCCCCAAGGCTCCCTTCATCCAGTCCAGGTGCCCTAGCCTCTAGGTTTTGGCAACTCGGGGTCCTGTaGGGTCTGCGGGAGGGGTGT | + |
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Preference number: 2 (lower is better) Translates to: PAPRLPSSSPGALASRFWQLGVL*GLREGC Trigger: ACACCCCTCCCGCAGACCCCACAGGACCCCGAGTTG...CCAAAACCTAGAGGCTAGGGCACCTGGACTGGATGAAGGGAGCCTTGGGGCTGG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 2 transcripts: ENSMUST00000043822.8 ENSMUST00000108449.9 |
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| 3UTR-3UTR CCA 90 bp | GCCCCAAGGCTCCCTTCATCCAGTCCAGGTGCCCTAGCCTCTAGGTTTTGGGCACAACTCGGGGTCCTGTaGGGTCTGCGGGAGGGGTGT | + |
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Preference number: 2 (lower is better) Translates to: APRLPSSSPGALASRFWAQLGVL*GLREGC Trigger: ACACCCCTCCCGCAGACCCCACAGGACCCCGAGTTG...TGCCCAAAACCTAGAGGCTAGGGCACCTGGACTGGATGAAGGGAGCCTTGGGGC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 2 transcripts: ENSMUST00000043822.8 ENSMUST00000108449.9 |
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| CDS-3UTR TCA 90 bp | GCCCCAAGGCTCCCTTCATCCAGTCCAGGTGCCCTAGCCTCTAGGTTTTGGGCACCCGGGGCCTGGAGGTaGCTTCCCACAGAACCGAGG | + |
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Preference number: 4 (lower is better) Translates to: APRLPSSSPGALASRFWAPGAWR*LPTEPR Trigger: CCTCGGTTCTGTGGGAAGTCACCTCCAGGCCCCGGG...TGCCCAAAACCTAGAGGCTAGGGCACCTGGACTGGATGAAGGGAGCCTTGGGGC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000043822.8 ENSMUST00000108449.9 |
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| CDS-3UTR TCA 90 bp | CCAGCCCCAAGGCTCCCTTCATCCAGTCCAGGTGCCCTAGCCTCTAGGTTTTGGCCCGGGGCCTGGAGGTaGCTTCCCACAGAACCGAGG | + |
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Preference number: 4 (lower is better) Translates to: PAPRLPSSSPGALASRFWPGAWR*LPTEPR Trigger: CCTCGGTTCTGTGGGAAGTCACCTCCAGGCCCCGGG...CCAAAACCTAGAGGCTAGGGCACCTGGACTGGATGAAGGGAGCCTTGGGGCTGG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000043822.8 ENSMUST00000108449.9 |
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| CDS-3UTR GCA 90 bp | GCCCCAAGGCTCCCTTCATCCAGTCCAGGTGCCCTAGCCTCTAGGTTTTGGGCACAAGTAGCTGCGCGGTaGGGGGCAGCAGGTCCCGCA | + |
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Preference number: 4 (lower is better) Translates to: APRLPSSSPGALASRFWAQVAAR*GAAGPA Trigger: TGCGGGACCTGCTGCCCCGCACCGCGCAGCTACTTG...TGCCCAAAACCTAGAGGCTAGGGCACCTGGACTGGATGAAGGGAGCCTTGGGGC 64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000043822.8 ENSMUST00000108449.9 |
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| CDS-3UTR GCA 90 bp | CCAGCCCCAAGGCTCCCTTCATCCAGTCCAGGTGCCCTAGCCTCTAGGTTTTGGCAAGTAGCTGCGCGGTaGGGGGCAGCAGGTCCCGCA | + |
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Preference number: 4 (lower is better) Translates to: PAPRLPSSSPGALASRFWQVAAR*GAAGPA Trigger: TGCGGGACCTGCTGCCCCGCACCGCGCAGCTACTTG...CCAAAACCTAGAGGCTAGGGCACCTGGACTGGATGAAGGGAGCCTTGGGGCTGG 64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000043822.8 ENSMUST00000108449.9 |
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| CDS-3UTR CCA 90 bp | GCCCCAAGGCTCCCTTCATCCAGTCCAGGTGCCCTAGCCTCTAGGTTTTGGGCACCTGGGCAGGGCGAGTaGTGCCAGTGTCAGCCAGCC | + |
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Preference number: 4 (lower is better) Translates to: APRLPSSSPGALASRFWAPGQGE*CQCQPA Trigger: GGCTGGCTGACACTGGCACCACTCGCCCTGCCCAGG...TGCCCAAAACCTAGAGGCTAGGGCACCTGGACTGGATGAAGGGAGCCTTGGGGC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000043822.8 ENSMUST00000108449.9 |
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| CDS-3UTR CCA 90 bp | CCAGCCCCAAGGCTCCCTTCATCCAGTCCAGGTGCCCTAGCCTCTAGGTTTTGGCCTGGGCAGGGCGAGTaGTGCCAGTGTCAGCCAGCC | + |
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Preference number: 4 (lower is better) Translates to: PAPRLPSSSPGALASRFWPGQGE*CQCQPA Trigger: GGCTGGCTGACACTGGCACCACTCGCCCTGCCCAGG...CCAAAACCTAGAGGCTAGGGCACCTGGACTGGATGAAGGGAGCCTTGGGGCTGG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000043822.8 ENSMUST00000108449.9 |
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| CDS-3UTR GCA 90 bp | CCAGCCCCAAGGCTCCCTTCATCCAGTCCAGGTGCCCTAGCCTCTAGGTTTTGGACCTCTCCAAGTAGCTaGGCGGTGCGGGGCAGCAGG | + |
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Preference number: 4 (lower is better) Translates to: PAPRLPSSSPGALASRFWTSPSS*AVRGSR Trigger: CCTGCTGCCCCGCACCGCGCAGCTACTTGGAGAGGT...CCAAAACCTAGAGGCTAGGGCACCTGGACTGGATGAAGGGAGCCTTGGGGCTGG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000043822.8 ENSMUST00000108449.9 |
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| CDS-3UTR CCA 90 bp | CCAGCCCCAAGGCTCCCTTCATCCAGTCCAGGTGCCCTAGCCTCTAGGTTTTGGCTGCATGGTGGGGCCTaGTTCCACAGGGTGGCAGGC | + |
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Preference number: 4 (lower is better) Translates to: PAPRLPSSSPGALASRFWLHGGA*FHRVAG Trigger: GCCTGCCACCCTGTGGAACCAGGCCCCACCATGCAG...CCAAAACCTAGAGGCTAGGGCACCTGGACTGGATGAAGGGAGCCTTGGGGCTGG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000043822.8 ENSMUST00000108449.9 |
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| CDS-3UTR CCA 90 bp | GCCCCAAGGCTCCCTTCATCCAGTCCAGGTGCCCTAGCCTCTAGGTTTTGGGCACTGCATGGTGGGGCCTaGTTCCACAGGGTGGCAGGC | + |
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Preference number: 4 (lower is better) Translates to: APRLPSSSPGALASRFWALHGGA*FHRVAG Trigger: GCCTGCCACCCTGTGGAACCAGGCCCCACCATGCAG...TGCCCAAAACCTAGAGGCTAGGGCACCTGGACTGGATGAAGGGAGCCTTGGGGC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000043822.8 ENSMUST00000108449.9 |
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| CDS-3UTR TCA 90 bp | CCAGCCCCAAGGCTCCCTTCATCCAGTCCAGGTGCCCTAGCCTCTAGGTTTTGGACAGGTCTGGCTGTCTaGGTCCTGCCAGGCAGCCAG | + |
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Preference number: 4 (lower is better) Translates to: PAPRLPSSSPGALASRFWTGLAV*VLPGSQ Trigger: CTGGCTGCCTGGCAGGACTCAGACAGCCAGACCTGT...CCAAAACCTAGAGGCTAGGGCACCTGGACTGGATGAAGGGAGCCTTGGGGCTGG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000043822.8 |
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| CDS-3UTR GCA 90 bp | CCAGCCCCAAGGCTCCCTTCATCCAGTCCAGGTGCCCTAGCCTCTAGGTTTTGGTGGCTGTCTGAGTCCTaGCAGGCAGCCAGGCAGCAG | + |
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Preference number: 4 (lower is better) Translates to: PAPRLPSSSPGALASRFWWLSES*QAARQQ Trigger: CTGCTGCCTGGCTGCCTGGCAGGACTCAGACAGCCA...CCAAAACCTAGAGGCTAGGGCACCTGGACTGGATGAAGGGAGCCTTGGGGCTGG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000043822.8 |
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| CDS-3UTR GCA 90 bp | GCCCCAAGGCTCCCTTCATCCAGTCCAGGTGCCCTAGCCTCTAGGTTTTGGGCAGGGCAGGGCGAGTGGTaGCAGTGTCAGCCAGCCTTT | + |
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Preference number: 4 (lower is better) Translates to: APRLPSSSPGALASRFWAGQGEW*QCQPAF Trigger: AAAGGCTGGCTGACACTGGCACCACTCGCCCTGCCC...TGCCCAAAACCTAGAGGCTAGGGCACCTGGACTGGATGAAGGGAGCCTTGGGGC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000043822.8 ENSMUST00000108449.9 |
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| CDS-3UTR GCA 90 bp | CCAGCCCCAAGGCTCCCTTCATCCAGTCCAGGTGCCCTAGCCTCTAGGTTTTGGGGGCAGGGCGAGTGGTaGCAGTGTCAGCCAGCCTTT | + |
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Preference number: 4 (lower is better) Translates to: PAPRLPSSSPGALASRFWGQGEW*QCQPAF Trigger: AAAGGCTGGCTGACACTGGCACCACTCGCCCTGCCC...CCAAAACCTAGAGGCTAGGGCACCTGGACTGGATGAAGGGAGCCTTGGGGCTGG 62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000043822.8 ENSMUST00000108449.9 |
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| CDS-3UTR CCA 90 bp | GCCCCAAGGCTCCCTTCATCCAGTCCAGGTGCCCTAGCCTCTAGGTTTTGGGCACTTTTTGCCTCGGGGTaGCAGGAGCTCCGCCACCTG | + |
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Preference number: 4 (lower is better) Translates to: APRLPSSSPGALASRFWALFASG*QELRHL Trigger: CAGGTGGCGGAGCTCCTGCCACCCCGAGGCAAAAAG...TGCCCAAAACCTAGAGGCTAGGGCACCTGGACTGGATGAAGGGAGCCTTGGGGC 62% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 2 transcripts: ENSMUST00000043822.8 ENSMUST00000108449.9 |
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| CDS-3UTR CCA 90 bp | CCAGCCCCAAGGCTCCCTTCATCCAGTCCAGGTGCCCTAGCCTCTAGGTTTTGGCCTGGTTCCACAGGGTaGCAGGCACACAGGAGGGAC | + |
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Preference number: 4 (lower is better) Translates to: PAPRLPSSSPGALASRFWPGSTG*QAHRRD Trigger: GTCCCTCCTGTGTGCCTGCCACCCTGTGGAACCAGG...CCAAAACCTAGAGGCTAGGGCACCTGGACTGGATGAAGGGAGCCTTGGGGCTGG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000043822.8 ENSMUST00000108449.9 |
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| CDS-3UTR CCA 90 bp | CCAGCCCCAAGGCTCCCTTCATCCAGTCCAGGTGCCCTAGCCTCTAGGTTTTGGGCAAGGCCTGCATGGTaGGGCCTGGTTCCACAGGGT | + |
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Preference number: 4 (lower is better) Translates to: PAPRLPSSSPGALASRFWARPAW*GLVPQG Trigger: ACCCTGTGGAACCAGGCCCCACCATGCAGGCCTTGC...CCAAAACCTAGAGGCTAGGGCACCTGGACTGGATGAAGGGAGCCTTGGGGCTGG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000043822.8 ENSMUST00000108449.9 |
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| CDS-3UTR CCA 90 bp | GCCCCAAGGCTCCCTTCATCCAGTCCAGGTGCCCTAGCCTCTAGGTTTTGGGCAGCAAGGCCTGCATGGTaGGGCCTGGTTCCACAGGGT | + |
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Preference number: 4 (lower is better) Translates to: APRLPSSSPGALASRFWAARPAW*GLVPQG Trigger: ACCCTGTGGAACCAGGCCCCACCATGCAGGCCTTGC...TGCCCAAAACCTAGAGGCTAGGGCACCTGGACTGGATGAAGGGAGCCTTGGGGC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000043822.8 ENSMUST00000108449.9 |
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| CDS-3UTR CCA 90 bp | CCAGCCCCAAGGCTCCCTTCATCCAGTCCAGGTGCCCTAGCCTCTAGGTTTTGGACCGCAAGGCCTGCATaGTGGGGCCTGGTTCCACAG | + |
|
Preference number: 4 (lower is better) Translates to: PAPRLPSSSPGALASRFWTARPA*WGLVPQ Trigger: CTGTGGAACCAGGCCCCACCATGCAGGCCTTGCGGT...CCAAAACCTAGAGGCTAGGGCACCTGGACTGGATGAAGGGAGCCTTGGGGCTGG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000043822.8 ENSMUST00000108449.9 |
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| CDS-3UTR TCA 90 bp | GCCCCAAGGCTCCCTTCATCCAGTCCAGGTGCCCTAGCCTCTAGGTTTTGGGCACCACCTGCCTGCCTTTaGCCTCCAGATTGGCCAGGT | + |
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Preference number: 4 (lower is better) Translates to: APRLPSSSPGALASRFWAPPACL*PPDWPG Trigger: ACCTGGCCAATCTGGAGGTCAAAGGCAGGCAGGTGG...TGCCCAAAACCTAGAGGCTAGGGCACCTGGACTGGATGAAGGGAGCCTTGGGGC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000043822.8 ENSMUST00000108449.9 |
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| CDS-3UTR TCA 90 bp | CCAGCCCCAAGGCTCCCTTCATCCAGTCCAGGTGCCCTAGCCTCTAGGTTTTGGGGCCTCTCCTGTGCCTaGCAGATACTCACGGCCTCT | + |
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Preference number: 4 (lower is better) Translates to: PAPRLPSSSPGALASRFWGLSCA*QILTAS Trigger: AGAGGCCGTGAGTATCTGTCAGGCACAGGAGAGGCC...CCAAAACCTAGAGGCTAGGGCACCTGGACTGGATGAAGGGAGCCTTGGGGCTGG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000043822.8 ENSMUST00000108449.9 |
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| CDS-3UTR TCA 90 bp | CCAGCCCCAAGGCTCCCTTCATCCAGTCCAGGTGCCCTAGCCTCTAGGTTTTGGCATCTGCAGCAGTCCTaGCCTCCGTTGGCCTCTCCT | + |
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Preference number: 4 (lower is better) Translates to: PAPRLPSSSPGALASRFWHLQQS*PPLASP Trigger: AGGAGAGGCCAACGGAGGTCAGGACTGCTGCAGATG...CCAAAACCTAGAGGCTAGGGCACCTGGACTGGATGAAGGGAGCCTTGGGGCTGG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000043822.8 ENSMUST00000108449.9 |
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| CDS-3UTR GCA 90 bp | GCCCCAAGGCTCCCTTCATCCAGTCCAGGTGCCCTAGCCTCTAGGTTTTGGGCAAGGAGCTCCGCCACCTaGCTGCCTTTGACCTCCAGA | + |
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Preference number: 4 (lower is better) Translates to: APRLPSSSPGALASRFWARSSAT*LPLTSR Trigger: TCTGGAGGTCAAAGGCAGGCAGGTGGCGGAGCTCCT...TGCCCAAAACCTAGAGGCTAGGGCACCTGGACTGGATGAAGGGAGCCTTGGGGC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000043822.8 ENSMUST00000108449.9 |
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| CDS-3UTR GCA 90 bp | CCAGCCCCAAGGCTCCCTTCATCCAGTCCAGGTGCCCTAGCCTCTAGGTTTTGGCCCAGCAGGGAAGAGTaGGCTCAACTCCGCGTGCAT | + |
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Preference number: 4 (lower is better) Translates to: PAPRLPSSSPGALASRFWPSREE*AQLRVH Trigger: ATGCACGCGGAGTTGAGCGCACTCTTCCCTGCTGGG...CCAAAACCTAGAGGCTAGGGCACCTGGACTGGATGAAGGGAGCCTTGGGGCTGG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000043822.8 ENSMUST00000108449.9 |
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| CDS-3UTR CCA 90 bp | GCCCCAAGGCTCCCTTCATCCAGTCCAGGTGCCCTAGCCTCTAGGTTTTGGGCATGCTCTTCTAGGCGCTaGAGCAACTTCACCGCCCGG | + |
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Preference number: 4 (lower is better) Translates to: APRLPSSSPGALASRFWACSSRR*SNFTAR Trigger: CCGGGCGGTGAAGTTGCTCCAGCGCCTAGAAGAGCA...TGCCCAAAACCTAGAGGCTAGGGCACCTGGACTGGATGAAGGGAGCCTTGGGGC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000043822.8 ENSMUST00000108449.9 |
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| CDS-3UTR CCA 90 bp | CCAGCCCCAAGGCTCCCTTCATCCAGTCCAGGTGCCCTAGCCTCTAGGTTTTGGTGCTCTTCTAGGCGCTaGAGCAACTTCACCGCCCGG | + |
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Preference number: 4 (lower is better) Translates to: PAPRLPSSSPGALASRFWCSSRR*SNFTAR Trigger: CCGGGCGGTGAAGTTGCTCCAGCGCCTAGAAGAGCA...CCAAAACCTAGAGGCTAGGGCACCTGGACTGGATGAAGGGAGCCTTGGGGCTGG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000043822.8 ENSMUST00000108449.9 |
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| CDS-3UTR CCA 90 bp | CCAGCCCCAAGGCTCCCTTCATCCAGTCCAGGTGCCCTAGCCTCTAGGTTTTGGTTTGGGGAGAGGAAGTaGAGGTCGGAGCCTGGGCAG | + |
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Preference number: 4 (lower is better) Translates to: PAPRLPSSSPGALASRFWFGERK*RSEPGQ Trigger: CTGCCCAGGCTCCGACCTCCACTTCCTCTCCCCAAA...CCAAAACCTAGAGGCTAGGGCACCTGGACTGGATGAAGGGAGCCTTGGGGCTGG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000043822.8 ENSMUST00000108449.9 |
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| CDS-3UTR TCA 90 bp | GCCCCAAGGCTCCCTTCATCCAGTCCAGGTGCCCTAGCCTCTAGGTTTTGGGCAAACTCCGCGTGCATGTaGCTGAAGATGAGGGCCAGC | + |
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Preference number: 4 (lower is better) Translates to: APRLPSSSPGALASRFWANSACM*LKMRAS Trigger: GCTGGCCCTCATCTTCAGTCACATGCACGCGGAGTT...TGCCCAAAACCTAGAGGCTAGGGCACCTGGACTGGATGAAGGGAGCCTTGGGGC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000043822.8 ENSMUST00000108449.9 |
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| CDS-3UTR TCA 90 bp | CCAGCCCCAAGGCTCCCTTCATCCAGTCCAGGTGCCCTAGCCTCTAGGTTTTGGAAAGTGGGCCACGGCTaGAAGAGCCTGGTGAAGACG | + |
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Preference number: 4 (lower is better) Translates to: PAPRLPSSSPGALASRFWKVGHG*KSLVKT Trigger: CGTCTTCACCAGGCTCTTTCAGCCGTGGCCCACTTT...CCAAAACCTAGAGGCTAGGGCACCTGGACTGGATGAAGGGAGCCTTGGGGCTGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000043822.8 ENSMUST00000108449.9 |
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| CDS-3UTR TCA 90 bp | GCCCCAAGGCTCCCTTCATCCAGTCCAGGTGCCCTAGCCTCTAGGTTTTGGGCAAAAGTGGGCCACGGCTaGAAGAGCCTGGTGAAGACG | + |
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Preference number: 4 (lower is better) Translates to: APRLPSSSPGALASRFWAKVGHG*KSLVKT Trigger: CGTCTTCACCAGGCTCTTTCAGCCGTGGCCCACTTT...TGCCCAAAACCTAGAGGCTAGGGCACCTGGACTGGATGAAGGGAGCCTTGGGGC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000043822.8 ENSMUST00000108449.9 |
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| CDS-3UTR TCA 90 bp | CCAGCCCCAAGGCTCCCTTCATCCAGTCCAGGTGCCCTAGCCTCTAGGTTTTGGGGACCTCATCGTAGGTaGGGAAGGCCATGTAGCCAG | + |
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Preference number: 4 (lower is better) Translates to: PAPRLPSSSPGALASRFWGPHRR*GRPCSQ Trigger: CTGGCTACATGGCCTTCCTCACCTACGATGAGGTCC...CCAAAACCTAGAGGCTAGGGCACCTGGACTGGATGAAGGGAGCCTTGGGGCTGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000043822.8 ENSMUST00000108449.9 |
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| CDS-3UTR TCA 90 bp | GCCCCAAGGCTCCCTTCATCCAGTCCAGGTGCCCTAGCCTCTAGGTTTTGGGCAGGACCTCATCGTAGGTaGGGAAGGCCATGTAGCCAG | + |
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Preference number: 4 (lower is better) Translates to: APRLPSSSPGALASRFWAGPHRR*GRPCSQ Trigger: CTGGCTACATGGCCTTCCTCACCTACGATGAGGTCC...TGCCCAAAACCTAGAGGCTAGGGCACCTGGACTGGATGAAGGGAGCCTTGGGGC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000043822.8 ENSMUST00000108449.9 |
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| CDS-3UTR GCA 90 bp | CCAGCCCCAAGGCTCCCTTCATCCAGTCCAGGTGCCCTAGCCTCTAGGTTTTGGCAGCTGCAGAGAAGATaGCCACAGGGCTCGATCCTC | + |
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Preference number: 4 (lower is better) Translates to: PAPRLPSSSPGALASRFWQLQRR*PQGSIL Trigger: GAGGATCGAGCCCTGTGGGCATCTTCTCTGCAGCTG...CCAAAACCTAGAGGCTAGGGCACCTGGACTGGATGAAGGGAGCCTTGGGGCTGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000043822.8 |
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| CDS-3UTR CCA 90 bp | CCAGCCCCAAGGCTCCCTTCATCCAGTCCAGGTGCCCTAGCCTCTAGGTTTTGGGAGCCCTTGGTGAGCTaGTACAGGTGCCCACAGTAC | + |
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Preference number: 4 (lower is better) Translates to: PAPRLPSSSPGALASRFWEPLVS*YRCPQY Trigger: GTACTGTGGGCACCTGTACCAGCTCACCAAGGGCTC...CCAAAACCTAGAGGCTAGGGCACCTGGACTGGATGAAGGGAGCCTTGGGGCTGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000043822.8 ENSMUST00000108449.9 |
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| CDS-3UTR CCA 90 bp | CCAGCCCCAAGGCTCCCTTCATCCAGTCCAGGTGCCCTAGCCTCTAGGTTTTGGTGCCTCCAGAAGATGTaGGCAGAGCCCTTGGTGAGC | + |
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Preference number: 4 (lower is better) Translates to: PAPRLPSSSPGALASRFWCLQKM*AEPLVS Trigger: GCTCACCAAGGGCTCTGCCCACATCTTCTGGAGGCA...CCAAAACCTAGAGGCTAGGGCACCTGGACTGGATGAAGGGAGCCTTGGGGCTGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000043822.8 ENSMUST00000108449.9 |
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| CDS-3UTR CCA 90 bp | GCCCCAAGGCTCCCTTCATCCAGTCCAGGTGCCCTAGCCTCTAGGTTTTGGGCATGCCTCCAGAAGATGTaGGCAGAGCCCTTGGTGAGC | + |
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Preference number: 4 (lower is better) Translates to: APRLPSSSPGALASRFWACLQKM*AEPLVS Trigger: GCTCACCAAGGGCTCTGCCCACATCTTCTGGAGGCA...TGCCCAAAACCTAGAGGCTAGGGCACCTGGACTGGATGAAGGGAGCCTTGGGGC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000043822.8 ENSMUST00000108449.9 |
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| CDS-3UTR CCA 90 bp | GCCCCAAGGCTCCCTTCATCCAGTCCAGGTGCCCTAGCCTCTAGGTTTTGGGCACAGGCGGGTACAGCTTaGCCGGAAGATATAGCTGCC | + |
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Preference number: 4 (lower is better) Translates to: APRLPSSSPGALASRFWAQAGTA*PEDIAA Trigger: GGCAGCTATATCTTCCGGCCAAGCTGTACCCGCCTG...TGCCCAAAACCTAGAGGCTAGGGCACCTGGACTGGATGAAGGGAGCCTTGGGGC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000043822.8 ENSMUST00000108449.9 |
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| CDS-3UTR CCA 90 bp | CCAGCCCCAAGGCTCCCTTCATCCAGTCCAGGTGCCCTAGCCTCTAGGTTTTGGAGTCCTGACCTCCGTTaGCCTCTCCTGTGCCTGACA | + |
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Preference number: 4 (lower is better) Translates to: PAPRLPSSSPGALASRFWSPDLR*PLLCLT Trigger: TGTCAGGCACAGGAGAGGCCAACGGAGGTCAGGACT...CCAAAACCTAGAGGCTAGGGCACCTGGACTGGATGAAGGGAGCCTTGGGGCTGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000043822.8 ENSMUST00000108449.9 |
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| CDS-3UTR CCA 90 bp | GCCCCAAGGCTCCCTTCATCCAGTCCAGGTGCCCTAGCCTCTAGGTTTTGGGCAAGTCCTGACCTCCGTTaGCCTCTCCTGTGCCTGACA | + |
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Preference number: 4 (lower is better) Translates to: APRLPSSSPGALASRFWASPDLR*PLLCLT Trigger: TGTCAGGCACAGGAGAGGCCAACGGAGGTCAGGACT...TGCCCAAAACCTAGAGGCTAGGGCACCTGGACTGGATGAAGGGAGCCTTGGGGC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000043822.8 ENSMUST00000108449.9 |
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| CDS-3UTR GCA 90 bp | CCAGCCCCAAGGCTCCCTTCATCCAGTCCAGGTGCCCTAGCCTCTAGGTTTTGGGTGAGCTGGTACAGGTaGCCACAGTACTTCCCAGCA | + |
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Preference number: 4 (lower is better) Translates to: PAPRLPSSSPGALASRFWVSWYR*PQYFPA Trigger: TGCTGGGAAGTACTGTGGGCACCTGTACCAGCTCAC...CCAAAACCTAGAGGCTAGGGCACCTGGACTGGATGAAGGGAGCCTTGGGGCTGG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000043822.8 ENSMUST00000108449.9 |
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| CDS-3UTR GCA 90 bp | GCCCCAAGGCTCCCTTCATCCAGTCCAGGTGCCCTAGCCTCTAGGTTTTGGGCAGTGAGCTGGTACAGGTaGCCACAGTACTTCCCAGCA | + |
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Preference number: 4 (lower is better) Translates to: APRLPSSSPGALASRFWAVSWYR*PQYFPA Trigger: TGCTGGGAAGTACTGTGGGCACCTGTACCAGCTCAC...TGCCCAAAACCTAGAGGCTAGGGCACCTGGACTGGATGAAGGGAGCCTTGGGGC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000043822.8 ENSMUST00000108449.9 |
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| CDS-3UTR CCA 90 bp | CCAGCCCCAAGGCTCCCTTCATCCAGTCCAGGTGCCCTAGCCTCTAGGTTTTGGGATTGGCCAGGTAGATaGCCAGAAAGTCATCGGCGC | + |
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Preference number: 4 (lower is better) Translates to: PAPRLPSSSPGALASRFWDWPGR*PESHRR Trigger: GCGCCGATGACTTTCTGGCCATCTACCTGGCCAATC...CCAAAACCTAGAGGCTAGGGCACCTGGACTGGATGAAGGGAGCCTTGGGGCTGG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000043822.8 ENSMUST00000108449.9 |
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| CDS-3UTR CCA 90 bp | GCCCCAAGGCTCCCTTCATCCAGTCCAGGTGCCCTAGCCTCTAGGTTTTGGGCAGATTGGCCAGGTAGATaGCCAGAAAGTCATCGGCGC | + |
|
Preference number: 4 (lower is better) Translates to: APRLPSSSPGALASRFWADWPGR*PESHRR Trigger: GCGCCGATGACTTTCTGGCCATCTACCTGGCCAATC...TGCCCAAAACCTAGAGGCTAGGGCACCTGGACTGGATGAAGGGAGCCTTGGGGC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000043822.8 ENSMUST00000108449.9 |
||
| CDS-3UTR CCA 90 bp | GCCCCAAGGCTCCCTTCATCCAGTCCAGGTGCCCTAGCCTCTAGGTTTTGGGCAGAACCGAGGCCATTTTaGGGAGAGGAAGTGGAGGTC | + |
|
Preference number: 4 (lower is better) Translates to: APRLPSSSPGALASRFWAEPRPF*GEEVEV Trigger: GACCTCCACTTCCTCTCCCCAAAATGGCCTCGGTTC...TGCCCAAAACCTAGAGGCTAGGGCACCTGGACTGGATGAAGGGAGCCTTGGGGC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000043822.8 ENSMUST00000108449.9 |
||
| CDS-3UTR TCA 90 bp | CCAGCCCCAAGGCTCCCTTCATCCAGTCCAGGTGCCCTAGCCTCTAGGTTTTGGTGTAGCCAGGATGGTTaGCAGCCAGGAGTTGCCAAT | + |
|
Preference number: 4 (lower is better) Translates to: PAPRLPSSSPGALASRFWCSQDG*QPGVAN Trigger: ATTGGCAACTCCTGGCTGTCAACCATCCTGGCTACA...CCAAAACCTAGAGGCTAGGGCACCTGGACTGGATGAAGGGAGCCTTGGGGCTGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000043822.8 ENSMUST00000108449.9 |
||
| CDS-3UTR GCA 90 bp | CCAGCCCCAAGGCTCCCTTCATCCAGTCCAGGTGCCCTAGCCTCTAGGTTTTGGGCCGGAAGATATAGCTaGCTGGTTTGTCCCTGTAGG | + |
|
Preference number: 4 (lower is better) Translates to: PAPRLPSSSPGALASRFWAGRYS*LVCPCR Trigger: CCTACAGGGACAAACCAGGCAGCTATATCTTCCGGC...CCAAAACCTAGAGGCTAGGGCACCTGGACTGGATGAAGGGAGCCTTGGGGCTGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000043822.8 ENSMUST00000108449.9 |
||
| CDS-3UTR GCA 90 bp | GCCCCAAGGCTCCCTTCATCCAGTCCAGGTGCCCTAGCCTCTAGGTTTTGGGCAGCCGGAAGATATAGCTaGCTGGTTTGTCCCTGTAGG | + |
|
Preference number: 4 (lower is better) Translates to: APRLPSSSPGALASRFWAAGRYS*LVCPCR Trigger: CCTACAGGGACAAACCAGGCAGCTATATCTTCCGGC...TGCCCAAAACCTAGAGGCTAGGGCACCTGGACTGGATGAAGGGAGCCTTGGGGC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000043822.8 ENSMUST00000108449.9 |
||
| CDS-3UTR GCA 90 bp | GCCCCAAGGCTCCCTTCATCCAGTCCAGGTGCCCTAGCCTCTAGGTTTTGGGCACCCTTCAGGAGCACCTaGAGCAGAGGTTTGTTGAGA | + |
|
Preference number: 4 (lower is better) Translates to: APRLPSSSPGALASRFWAPFRST*SRGLLR Trigger: TCTCAACAAACCTCTGCTGCAGGTGCTCCTGAAGGG...TGCCCAAAACCTAGAGGCTAGGGCACCTGGACTGGATGAAGGGAGCCTTGGGGC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000043822.8 ENSMUST00000108449.9 |
||
| CDS-3UTR GCA 90 bp | GCCCCAAGGCTCCCTTCATCCAGTCCAGGTGCCCTAGCCTCTAGGTTTTGGGCATCTCTGCGCAGATCTTaGACAGCTGGAACGTGGAGT | + |
|
Preference number: 4 (lower is better) Translates to: APRLPSSSPGALASRFWASLRRS*TAGTWS Trigger: ACTCCACGTTCCAGCTGTGCAAGATCTGCGCAGAGA...TGCCCAAAACCTAGAGGCTAGGGCACCTGGACTGGATGAAGGGAGCCTTGGGGC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000043822.8 |
||
| CDS-3UTR GCA 90 bp | CCAGCCCCAAGGCTCCCTTCATCCAGTCCAGGTGCCCTAGCCTCTAGGTTTTGGCGAACTCCACAATTCTaGCTCCAGAAGATGTGGGCA | + |
|
Preference number: 4 (lower is better) Translates to: PAPRLPSSSPGALASRFWRTPQF*LQKMWA Trigger: TGCCCACATCTTCTGGAGGCAGAATTGTGGAGTTCG...CCAAAACCTAGAGGCTAGGGCACCTGGACTGGATGAAGGGAGCCTTGGGGCTGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000043822.8 ENSMUST00000108449.9 |
||
| CDS-3UTR GCA 90 bp | GCCCCAAGGCTCCCTTCATCCAGTCCAGGTGCCCTAGCCTCTAGGTTTTGGGCACGAACTCCACAATTCTaGCTCCAGAAGATGTGGGCA | + |
|
Preference number: 4 (lower is better) Translates to: APRLPSSSPGALASRFWARTPQF*LQKMWA Trigger: TGCCCACATCTTCTGGAGGCAGAATTGTGGAGTTCG...TGCCCAAAACCTAGAGGCTAGGGCACCTGGACTGGATGAAGGGAGCCTTGGGGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000043822.8 ENSMUST00000108449.9 |
||
| CDS-3UTR CCA 90 bp | GCCCCAAGGCTCCCTTCATCCAGTCCAGGTGCCCTAGCCTCTAGGTTTTGGGCACAGATCTTGCACAGCTaGAACGTGGAGTTCATGGCT | + |
|
Preference number: 4 (lower is better) Translates to: APRLPSSSPGALASRFWAQILHS*NVEFMA Trigger: AGCCATGAACTCCACGTTCCAGCTGTGCAAGATCTG...TGCCCAAAACCTAGAGGCTAGGGCACCTGGACTGGATGAAGGGAGCCTTGGGGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000043822.8 |
||
| CDS-3UTR CCA 90 bp | GCCCCAAGGCTCCCTTCATCCAGTCCAGGTGCCCTAGCCTCTAGGTTTTGGGCATCCCGGAAAACATCCTaGTTCACGTCCTTTTTGCCT | + |
|
Preference number: 4 (lower is better) Translates to: APRLPSSSPGALASRFWASRKTS*FTSFLP Trigger: AGGCAAAAAGGACGTGAACCAGGATGTTTTCCGGGA...TGCCCAAAACCTAGAGGCTAGGGCACCTGGACTGGATGAAGGGAGCCTTGGGGC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 2 transcripts: ENSMUST00000043822.8 ENSMUST00000108449.9 |
||
| CDS-3UTR CCA 90 bp | GCCCCAAGGCTCCCTTCATCCAGTCCAGGTGCCCTAGCCTCTAGGTTTTGGGCAGAGCTCAGTCAGGTCTaGGTTGTGTTTCTTTCCATC | + |
|
Preference number: 4 (lower is better) Translates to: APRLPSSSPGALASRFWAELSQV*VVFLSI Trigger: GATGGAAAGAAACACAACCCAGACCTGACTGAGCTC...TGCCCAAAACCTAGAGGCTAGGGCACCTGGACTGGATGAAGGGAGCCTTGGGGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000043822.8 ENSMUST00000108449.9 |
||
| CDS-3UTR CCA 90 bp | CCAGCCCCAAGGCTCCCTTCATCCAGTCCAGGTGCCCTAGCCTCTAGGTTTTGGGAGCTCAGTCAGGTCTaGGTTGTGTTTCTTTCCATC | + |
|
Preference number: 4 (lower is better) Translates to: PAPRLPSSSPGALASRFWELSQV*VVFLSI Trigger: GATGGAAAGAAACACAACCCAGACCTGACTGAGCTC...CCAAAACCTAGAGGCTAGGGCACCTGGACTGGATGAAGGGAGCCTTGGGGCTGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000043822.8 ENSMUST00000108449.9 |
||
| CDS-3UTR GCA 90 bp | CCAGCCCCAAGGCTCCCTTCATCCAGTCCAGGTGCCCTAGCCTCTAGGTTTTGGTTGACAGCCAGGAGTTaGCAATTCCTCAGTAAAGTG | + |
|
Preference number: 4 (lower is better) Translates to: PAPRLPSSSPGALASRFWLTARS*QFLSKV Trigger: CACTTTACTGAGGAATTGGCAACTCCTGGCTGTCAA...CCAAAACCTAGAGGCTAGGGCACCTGGACTGGATGAAGGGAGCCTTGGGGCTGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000043822.8 ENSMUST00000108449.9 |
||
| CDS CCA 90 bp | GGCCCCGTGACCATCCTGGGATCCCTGCATTGCTCTTCTAGGCGCTaGAGCAACTTCACCGCCCGGCTAAGCGCGCGTGGCTCGCCCCGC | + |
|
Preference number: 5 (lower is better) Translates to: GPVTILGSLHCSSRR*SNFTARLSARGSPR Trigger: GCGGGGCGAGCCACGCGCGCTTAGCCGGGCGGTGAAGTTGCTCCAGCGCCTAGAAGAGCAATGCAGGGATCCCAGGATGGTCACGGGGCC 69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000043822.8 ENSMUST00000108449.9 |
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| CDS GCA 90 bp | TCCCGCAGGGACGGGGGCCCCGTGACCATCCTGGGATCCCTGCATTaGTCTTCTAGGCGCTGGAGCAACTTCACCGCCCGGCTAAGCGCG | + |
|
Preference number: 5 (lower is better) Translates to: SRRDGGPVTILGSLH*SSRRWSNFTARLSA Trigger: CGCGCTTAGCCGGGCGGTGAAGTTGCTCCAGCGCCTAGAAGAGCAATGCAGGGATCCCAGGATGGTCACGGGGCCCCCGTCCCTGCGGGA 68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000043822.8 ENSMUST00000108449.9 |
||
| CDS GCA 90 bp | TTTGGGGAGAGGAAGTGGAGGTCGGAGCCTGGGCAGGGCGAGTGGTaGCAGTGTCAGCCAGCCTTTGTCTTGGGGTCCCTGAGGGAACTG | + |
|
Preference number: 5 (lower is better) Translates to: FGERKWRSEPGQGEW*QCQPAFVLGSLREL Trigger: CAGTTCCCTCAGGGACCCCAAGACAAAGGCTGGCTGACACTGGCACCACTCGCCCTGCCCAGGCTCCGACCTCCACTTCCTCTCCCCAAA 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000043822.8 ENSMUST00000108449.9 |
||
| CDS CCA 90 bp | GGAGGTGACTTCCCACAGAACCGAGGCCATTTTGGGGAGAGGAAGTaGAGGTCGGAGCCTGGGCAGGGCGAGTGGTGCCAGTGTCAGCCA | + |
|
Preference number: 5 (lower is better) Translates to: GGDFPQNRGHFGERK*RSEPGQGEWCQCQP Trigger: TGGCTGACACTGGCACCACTCGCCCTGCCCAGGCTCCGACCTCCACTTCCTCTCCCCAAAATGGCCTCGGTTCTGTGGGAAGTCACCTCC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000043822.8 ENSMUST00000108449.9 |
||
| CDS-3UTR CAA 90 bp | GCCCCAAGGCTCCCTTCATCCAGTCCAGGTGCCCTAGCCTCTAGGTTTTGGGCACCTCGCGCCGGGCCTTaGCCACCTCTCCAAGTAGCT | + |
|
Preference number: 5 (lower is better) Translates to: APRLPSSSPGALASRFWAPRAGP*PPLQVA Trigger: AGCTACTTGGAGAGGTGGCAAAGGCCCGGCGCGAGG...TGCCCAAAACCTAGAGGCTAGGGCACCTGGACTGGATGAAGGGAGCCTTGGGGC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000043822.8 ENSMUST00000108449.9 |
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| CDS CCA 90 bp | ACAGAACCGAGGCCATTTTGGGGAGAGGAAGTGGAGGTCGGAGCCTaGGCAGGGCGAGTGGTGCCAGTGTCAGCCAGCCTTTGTCTTGGG | + |
|
Preference number: 5 (lower is better) Translates to: TEPRPFWGEEVEVGA*AGRVVPVSASLCLG Trigger: CCCAAGACAAAGGCTGGCTGACACTGGCACCACTCGCCCTGCCCAGGCTCCGACCTCCACTTCCTCTCCCCAAAATGGCCTCGGTTCTGT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000043822.8 ENSMUST00000108449.9 |
||
| CDS-3UTR CAA 90 bp | GCCCCAAGGCTCCCTTCATCCAGTCCAGGTGCCCTAGCCTCTAGGTTTTGGGCAGCCACCTGCCTGCCTTaGACCTCCAGATTGGCCAGG | + |
|
Preference number: 5 (lower is better) Translates to: APRLPSSSPGALASRFWAATCLP*TSRLAR Trigger: CCTGGCCAATCTGGAGGTCAAAGGCAGGCAGGTGGC...TGCCCAAAACCTAGAGGCTAGGGCACCTGGACTGGATGAAGGGAGCCTTGGGGC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000043822.8 ENSMUST00000108449.9 |
||
| CDS-3UTR CAA 90 bp | CCAGCCCCAAGGCTCCCTTCATCCAGTCCAGGTGCCCTAGCCTCTAGGTTTTGGGGCCAGCTTGGCCAGTaGTCGCCTGAATCTGGAGCC | + |
|
Preference number: 5 (lower is better) Translates to: PAPRLPSSSPGALASRFWGQLGQ*SPESGA Trigger: GGCTCCAGATTCAGGCGACAACTGGCCAAGCTGGCC...CCAAAACCTAGAGGCTAGGGCACCTGGACTGGATGAAGGGAGCCTTGGGGCTGG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000043822.8 ENSMUST00000108449.9 |
||
| CDS-3UTR CAA 90 bp | CCAGCCCCAAGGCTCCCTTCATCCAGTCCAGGTGCCCTAGCCTCTAGGTTTTGGGGCCTGCAGGCGTGTTaGGACCTCATCGTAGGTGAG | + |
|
Preference number: 5 (lower is better) Translates to: PAPRLPSSSPGALASRFWGLQAC*DLIVGE Trigger: CTCACCTACGATGAGGTCCAAACACGCCTGCAGGCC...CCAAAACCTAGAGGCTAGGGCACCTGGACTGGATGAAGGGAGCCTTGGGGCTGG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000043822.8 ENSMUST00000108449.9 |
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| CDS-3UTR CAA 90 bp | GCCCCAAGGCTCCCTTCATCCAGTCCAGGTGCCCTAGCCTCTAGGTTTTGGGCACAGCCAGCCTTTGTCTaGGGGTCCCTGAGGGAACTG | + |
|
Preference number: 5 (lower is better) Translates to: APRLPSSSPGALASRFWAQPAFV*GSLREL Trigger: CAGTTCCCTCAGGGACCCCAAGACAAAGGCTGGCTG...TGCCCAAAACCTAGAGGCTAGGGCACCTGGACTGGATGAAGGGAGCCTTGGGGC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000043822.8 ENSMUST00000108449.9 |
||
| CDS TCA 90 bp | GAGCCATCTGCAGCAGTCCTGACCTCCGTTGGCCTCTCCTGTGCCTaGCAGATACTCACGGCCTCTCGACCTTTGATCTCACAACGGCAG | + |
|
Preference number: 5 (lower is better) Translates to: EPSAAVLTSVGLSCA*QILTASRPLISQRQ Trigger: CTGCCGTTGTGAGATCAAAGGTCGAGAGGCCGTGAGTATCTGTCAGGCACAGGAGAGGCCAACGGAGGTCAGGACTGCTGCAGATGGCTC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000043822.8 ENSMUST00000108449.9 |
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| CDS TCA 90 bp | GCAGAGGGAATCACCGGCCCCAGTTTCTGCTCAGCAGCCTCCTGGTaGCAGTTGTCTCTTGAGCCATCTGCAGCAGTCCTGACCTCCGTT | + |
|
Preference number: 5 (lower is better) Translates to: AEGITGPSFCSAASW*QLSLEPSAAVLTSV Trigger: AACGGAGGTCAGGACTGCTGCAGATGGCTCAAGAGACAACTGTCACCAGGAGGCTGCTGAGCAGAAACTGGGGCCGGTGATTCCCTCTGC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000043822.8 ENSMUST00000108449.9 |
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| CDS GCA 90 bp | GGTGAGCTGGTACAGGTGCCCACAGTACTTCCCAGCAGGGAAGAGTaGGCTCAACTCCGCGTGCATGTGACTGAAGATGAGGGCCAGCTT | + |
|
Preference number: 5 (lower is better) Translates to: GELVQVPTVLPSREE*AQLRVHVTEDEGQL Trigger: AAGCTGGCCCTCATCTTCAGTCACATGCACGCGGAGTTGAGCGCACTCTTCCCTGCTGGGAAGTACTGTGGGCACCTGTACCAGCTCACC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000043822.8 ENSMUST00000108449.9 |
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| CDS CCA 90 bp | CCACAATTCTGCCTCCAGAAGATGTGGGCAGAGCCCTTGGTGAGCTaGTACAGGTGCCCACAGTACTTCCCAGCAGGGAAGAGTGCGCTC | + |
|
Preference number: 5 (lower is better) Translates to: PQFCLQKMWAEPLVS*YRCPQYFPAGKSAL Trigger: GAGCGCACTCTTCCCTGCTGGGAAGTACTGTGGGCACCTGTACCAGCTCACCAAGGGCTCTGCCCACATCTTCTGGAGGCAGAATTGTGG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000043822.8 ENSMUST00000108449.9 |
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| CDS-3UTR CAA 90 bp | GCCCCAAGGCTCCCTTCATCCAGTCCAGGTGCCCTAGCCTCTAGGTTTTGGGCAAAGATGAGGGCCAGCTaGGCCAGTTGTCGCCTGAAT | + |
|
Preference number: 5 (lower is better) Translates to: APRLPSSSPGALASRFWAKMRAS*ASCRLN Trigger: ATTCAGGCGACAACTGGCCAAGCTGGCCCTCATCTT...TGCCCAAAACCTAGAGGCTAGGGCACCTGGACTGGATGAAGGGAGCCTTGGGGC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000043822.8 ENSMUST00000108449.9 |
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| CDS-3UTR CAA 90 bp | GCCCCAAGGCTCCCTTCATCCAGTCCAGGTGCCCTAGCCTCTAGGTTTTGGGCAGAAGATGCCGTCCTTTaGTCCCTTCAGGAGCACCTG | + |
|
Preference number: 5 (lower is better) Translates to: APRLPSSSPGALASRFWAEDAVL*SLQEHL Trigger: CAGGTGCTCCTGAAGGGACAAAAGGACGGCATCTTC...TGCCCAAAACCTAGAGGCTAGGGCACCTGGACTGGATGAAGGGAGCCTTGGGGC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000043822.8 ENSMUST00000108449.9 |
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| CDS-3UTR CAA 90 bp | CCAGCCCCAAGGCTCCCTTCATCCAGTCCAGGTGCCCTAGCCTCTAGGTTTTGGGAAGATGCCGTCCTTTaGTCCCTTCAGGAGCACCTG | + |
|
Preference number: 5 (lower is better) Translates to: PAPRLPSSSPGALASRFWEDAVL*SLQEHL Trigger: CAGGTGCTCCTGAAGGGACAAAAGGACGGCATCTTC...CCAAAACCTAGAGGCTAGGGCACCTGGACTGGATGAAGGGAGCCTTGGGGCTGG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000043822.8 ENSMUST00000108449.9 |
||
| CDS-3UTR CAA 90 bp | GCCCCAAGGCTCCCTTCATCCAGTCCAGGTGCCCTAGCCTCTAGGTTTTGGGCAACGGCCTCTCGACCTTaGATCTCACAACGGCAGAAG | + |
|
Preference number: 5 (lower is better) Translates to: APRLPSSSPGALASRFWATASRP*ISQRQK Trigger: CTTCTGCCGTTGTGAGATCAAAGGTCGAGAGGCCGT...TGCCCAAAACCTAGAGGCTAGGGCACCTGGACTGGATGAAGGGAGCCTTGGGGC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000043822.8 ENSMUST00000108449.9 |
||
| CDS-3UTR CAA 90 bp | CCAGCCCCAAGGCTCCCTTCATCCAGTCCAGGTGCCCTAGCCTCTAGGTTTTGGACGGCCTCTCGACCTTaGATCTCACAACGGCAGAAG | + |
|
Preference number: 5 (lower is better) Translates to: PAPRLPSSSPGALASRFWTASRP*ISQRQK Trigger: CTTCTGCCGTTGTGAGATCAAAGGTCGAGAGGCCGT...CCAAAACCTAGAGGCTAGGGCACCTGGACTGGATGAAGGGAGCCTTGGGGCTGG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000043822.8 ENSMUST00000108449.9 |
||
| CDS-3UTR CAA 90 bp | GCCCCAAGGCTCCCTTCATCCAGTCCAGGTGCCCTAGCCTCTAGGTTTTGGGCAAGAACCGAGGCCATTTaGGGGAGAGGAAGTGGAGGT | + |
|
Preference number: 5 (lower is better) Translates to: APRLPSSSPGALASRFWARTEAI*GRGSGG Trigger: ACCTCCACTTCCTCTCCCCAAAATGGCCTCGGTTCT...TGCCCAAAACCTAGAGGCTAGGGCACCTGGACTGGATGAAGGGAGCCTTGGGGC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000043822.8 ENSMUST00000108449.9 |
||
| CDS-3UTR CAA 90 bp | CCAGCCCCAAGGCTCCCTTCATCCAGTCCAGGTGCCCTAGCCTCTAGGTTTTGGAGAACCGAGGCCATTTaGGGGAGAGGAAGTGGAGGT | + |
|
Preference number: 5 (lower is better) Translates to: PAPRLPSSSPGALASRFWRTEAI*GRGSGG Trigger: ACCTCCACTTCCTCTCCCCAAAATGGCCTCGGTTCT...CCAAAACCTAGAGGCTAGGGCACCTGGACTGGATGAAGGGAGCCTTGGGGCTGG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000043822.8 ENSMUST00000108449.9 |
||
| CDS CCA 90 bp | CAGGGAAGCACGCACCGAACTCCACAATTCTGCCTCCAGAAGATGTaGGCAGAGCCCTTGGTGAGCTGGTACAGGTGCCCACAGTACTTC | + |
|
Preference number: 5 (lower is better) Translates to: QGSTHRTPQFCLQKM*AEPLVSWYRCPQYF Trigger: GAAGTACTGTGGGCACCTGTACCAGCTCACCAAGGGCTCTGCCCACATCTTCTGGAGGCAGAATTGTGGAGTTCGGTGCGTGCTTCCCTG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000043822.8 ENSMUST00000108449.9 |
||
| CDS-3UTR CAA 90 bp | GCCCCAAGGCTCCCTTCATCCAGTCCAGGTGCCCTAGCCTCTAGGTTTTGGGCAGTTGAGAGGAATGGTTaGCAGGATGCTTCCATCGGA | + |
|
Preference number: 5 (lower is better) Translates to: APRLPSSSPGALASRFWAVERNG*QDASIG Trigger: TCCGATGGAAGCATCCTGCAAACCATTCCTCTCAAC...TGCCCAAAACCTAGAGGCTAGGGCACCTGGACTGGATGAAGGGAGCCTTGGGGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000043822.8 ENSMUST00000108449.9 |
||
| CDS-3UTR CAA 90 bp | CCAGCCCCAAGGCTCCCTTCATCCAGTCCAGGTGCCCTAGCCTCTAGGTTTTGGGTTGAGAGGAATGGTTaGCAGGATGCTTCCATCGGA | + |
|
Preference number: 5 (lower is better) Translates to: PAPRLPSSSPGALASRFWVERNG*QDASIG Trigger: TCCGATGGAAGCATCCTGCAAACCATTCCTCTCAAC...CCAAAACCTAGAGGCTAGGGCACCTGGACTGGATGAAGGGAGCCTTGGGGCTGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000043822.8 ENSMUST00000108449.9 |
||
| CDS-3UTR CAA 90 bp | GCCCCAAGGCTCCCTTCATCCAGTCCAGGTGCCCTAGCCTCTAGGTTTTGGGCAACCTGCAGCAGAGGTTaGTTGAGAGGAATGGTTTGC | + |
|
Preference number: 5 (lower is better) Translates to: APRLPSSSPGALASRFWATCSRG*LRGMVC Trigger: GCAAACCATTCCTCTCAACAAACCTCTGCTGCAGGT...TGCCCAAAACCTAGAGGCTAGGGCACCTGGACTGGATGAAGGGAGCCTTGGGGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000043822.8 ENSMUST00000108449.9 |
||
| CDS-3UTR CAA 90 bp | CCAGCCCCAAGGCTCCCTTCATCCAGTCCAGGTGCCCTAGCCTCTAGGTTTTGGACCTGCAGCAGAGGTTaGTTGAGAGGAATGGTTTGC | + |
|
Preference number: 5 (lower is better) Translates to: PAPRLPSSSPGALASRFWTCSRG*LRGMVC Trigger: GCAAACCATTCCTCTCAACAAACCTCTGCTGCAGGT...CCAAAACCTAGAGGCTAGGGCACCTGGACTGGATGAAGGGAGCCTTGGGGCTGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000043822.8 ENSMUST00000108449.9 |
||
| CDS GCA 90 bp | CCCTTCAGGAGCACCTGCAGCAGAGGTTTGTTGAGAGGAATGGTTTaGAGGATGCTTCCATCGGAGCTCACGTATCCAATGGCCCACTGC | + |
|
Preference number: 5 (lower is better) Translates to: PFRSTCSRGLLRGMV*RMLPSELTYPMAHC Trigger: GCAGTGGGCCATTGGATACGTGAGCTCCGATGGAAGCATCCTGCAAACCATTCCTCTCAACAAACCTCTGCTGCAGGTGCTCCTGAAGGG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000043822.8 ENSMUST00000108449.9 |
||
| CDS GCA 90 bp | AGTTCATGGCTTGGTAGAGCAGCAGTTGTTCCTCTGACACTTGGATaGGTTGGTAGGGTTCTACCCGGCAGAGCTCAGTCAGGTCTGGGT | + |
|
Preference number: 5 (lower is better) Translates to: SSWLGRAAVVPLTLG*VGRVLPGRAQSGLG Trigger: ACCCAGACCTGACTGAGCTCTGCCGGGTAGAACCCTACCAACGCATCCAAGTGTCAGAGGAACAACTGCTGCTCTACCAAGCCATGAACT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000043822.8 |
||
| CDS TCA 90 bp | TGCCGTCCTTTTGTCCCTTCAGGAGCACCTGCAGCAGAGGTTTGTTaGGAGGAATGGTTTGCAGGATGCTTCCATCGGAGCTCACGTATC | + |
|
Preference number: 5 (lower is better) Translates to: CRPFVPSGAPAAEVC*EEWFAGCFHRSSRI Trigger: GATACGTGAGCTCCGATGGAAGCATCCTGCAAACCATTCCTCTCAACAAACCTCTGCTGCAGGTGCTCCTGAAGGGACAAAAGGACGGCA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000043822.8 ENSMUST00000108449.9 |
||
| CDS CCA 90 bp | TTGGATGCGTTGGTAGGGTTCTACCCGGCAGAGCTCAGTCAGGTCTaGGTTGTGTTTCTTTCCATCAGGGAAGAGGAAGATGCCGTCCTT | + |
|
Preference number: 5 (lower is better) Translates to: LDALVGFYPAELSQV*VVFLSIREEEDAVL Trigger: AAGGACGGCATCTTCCTCTTCCCTGATGGAAAGAAACACAACCCAGACCTGACTGAGCTCTGCCGGGTAGAACCCTACCAACGCATCCAA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000043822.8 ENSMUST00000108449.9 |
||
| CDS CCA 90 bp | TGTCCCTCTCTGCGCAGATCTTGCACAGCTGGAACGTGGAGTTCATaGCTTGGTAGAGCAGCAGTTGTTCCTCTGACACTTGGATGCGTT | + |
|
Preference number: 5 (lower is better) Translates to: CPSLRRSCTAGTWSS*LGRAAVVPLTLGCV Trigger: AACGCATCCAAGTGTCAGAGGAACAACTGCTGCTCTACCAAGCCATGAACTCCACGTTCCAGCTGTGCAAGATCTGCGCAGAGAGGGACA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000043822.8 |
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| CDS CCA 90 bp | TCACGTCCTTGTCCCTCTCTGCGCAGATCTTGCACAGCTGGAACGTaGAGTTCATGGCTTGGTAGAGCAGCAGTTGTTCCTCTGACACTT | + |
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Preference number: 5 (lower is better) Translates to: SRPCPSLRRSCTAGT*SSWLGRAAVVPLTL Trigger: AAGTGTCAGAGGAACAACTGCTGCTCTACCAAGCCATGAACTCCACGTTCCAGCTGTGCAAGATCTGCGCAGAGAGGGACAAGGACGTGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000043822.8 |
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| CDS TCA 90 bp | TTGACAGCCAGGAGTTGCCAATTCCTCAGTAAAGTGGGCCACGGCTaGAAGAGCCTGGTGAAGACGTCAAACTCAAAGACAGACACGTGG | + |
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Preference number: 5 (lower is better) Translates to: LTARSCQFLSKVGHG*KSLVKTSNSKTDTW Trigger: CCACGTGTCTGTCTTTGAGTTTGACGTCTTCACCAGGCTCTTTCAGCCGTGGCCCACTTTACTGAGGAATTGGCAACTCCTGGCTGTCAA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000043822.8 ENSMUST00000108449.9 |
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| CDS CCA 72 bp | GCGCTGGAGCAACTTCACCGCCCGGCTAAGCGCGCGTaGCTCGCCCCGCTGCCACCCTCGCGGGGCTGCCGC | + |
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Preference number: 6 (lower is better) Translates to: ALEQLHRPAKRA*LAPLPPSRGCR Trigger: GCGGCAGCCCCGCGAGGGTGGCAGCGGGGCGAGCCACGCGCGCTTAGCCGGGCGGTGAAGTTGCTCCAGCGC 78% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000043822.8 ENSMUST00000108449.9 |
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| CDS GCA 72 bp | GCCTCGCGCCGGGCCTTTGCCACCTCTCCAAGTAGCTaGGCGGTGCGGGGCAGCAGGTCCCGCAGGGACGGG | + |
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Preference number: 6 (lower is better) Translates to: ASRRAFATSPSS*AVRGSRSRRDG Trigger: CCCGTCCCTGCGGGACCTGCTGCCCCGCACCGCGCAGCTACTTGGAGAGGTGGCAAAGGCCCGGCGCGAGGC 75% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000043822.8 ENSMUST00000108449.9 |
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| CDS CAA 90 bp | CGCCACCGGGACCCTCGGGGTCTTCCCTGGCCTCGCGCCGGGCCTTaGCCACCTCTCCAAGTAGCTGCGCGGTGCGGGGCAGCAGGTCCC | + |
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Preference number: 6 (lower is better) Translates to: RHRDPRGLPWPRAGP*PPLQVAARCGAAGP Trigger: GGGACCTGCTGCCCCGCACCGCGCAGCTACTTGGAGAGGTGGCAAAGGCCCGGCGCGAGGCCAGGGAAGACCCCGAGGGTCCCGGTGGCG 74% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000043822.8 ENSMUST00000108449.9 |
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| CDS CAA 72 bp | GACCCTCGGGGTCTTCCCTGGCCTCGCGCCGGGCCTTaGCCACCTCTCCAAGTAGCTGCGCGGTGCGGGGCA | + |
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Preference number: 6 (lower is better) Translates to: DPRGLPWPRAGP*PPLQVAARCGA Trigger: TGCCCCGCACCGCGCAGCTACTTGGAGAGGTGGCAAAGGCCCGGCGCGAGGCCAGGGAAGACCCCGAGGGTC 72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000043822.8 ENSMUST00000108449.9 |
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| CDS GCA 72 bp | GACGGGGGCCCCGTGACCATCCTGGGATCCCTGCATTaGTCTTCTAGGCGCTGGAGCAACTTCACCGCCCGG | + |
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Preference number: 6 (lower is better) Translates to: DGGPVTILGSLH*SSRRWSNFTAR Trigger: CCGGGCGGTGAAGTTGCTCCAGCGCCTAGAAGAGCAATGCAGGGATCCCAGGATGGTCACGGGGCCCCCGTC 67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000043822.8 ENSMUST00000108449.9 |
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| CDS GCA 72 bp | AGGAAGTGGAGGTCGGAGCCTGGGCAGGGCGAGTGGTaGCAGTGTCAGCCAGCCTTTGTCTTGGGGTCCCTG | + |
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Preference number: 6 (lower is better) Translates to: RKWRSEPGQGEW*QCQPAFVLGSL Trigger: CAGGGACCCCAAGACAAAGGCTGGCTGACACTGGCACCACTCGCCCTGCCCAGGCTCCGACCTCCACTTCCT 65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000043822.8 ENSMUST00000108449.9 |
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| CDS CCA 72 bp | ACCATCCTGGGATCCCTGCATTGCTCTTCTAGGCGCTaGAGCAACTTCACCGCCCGGCTAAGCGCGCGTGGC | + |
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Preference number: 6 (lower is better) Translates to: TILGSLHCSSRR*SNFTARLSARG Trigger: GCCACGCGCGCTTAGCCGGGCGGTGAAGTTGCTCCAGCGCCTAGAAGAGCAATGCAGGGATCCCAGGATGGT 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000043822.8 ENSMUST00000108449.9 |
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| CDS CCA 72 bp | AGGCCATTTTGGGGAGAGGAAGTGGAGGTCGGAGCCTaGGCAGGGCGAGTGGTGCCAGTGTCAGCCAGCCTT | + |
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Preference number: 6 (lower is better) Translates to: RPFWGEEVEVGA*AGRVVPVSASL Trigger: AAGGCTGGCTGACACTGGCACCACTCGCCCTGCCCAGGCTCCGACCTCCACTTCCTCTCCCCAAAATGGCCT 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000043822.8 ENSMUST00000108449.9 |
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| CDS CCA 72 bp | TTCCCACAGAACCGAGGCCATTTTGGGGAGAGGAAGTaGAGGTCGGAGCCTGGGCAGGGCGAGTGGTGCCAG | + |
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Preference number: 6 (lower is better) Translates to: FPQNRGHFGERK*RSEPGQGEWCQ Trigger: CTGGCACCACTCGCCCTGCCCAGGCTCCGACCTCCACTTCCTCTCCCCAAAATGGCCTCGGTTCTGTGGGAA 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000043822.8 ENSMUST00000108449.9 |
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| CDS CAA 72 bp | GGCCTGGAGGTGACTTCCCACAGAACCGAGGCCATTTaGGGGAGAGGAAGTGGAGGTCGGAGCCTGGGCAGG | + |
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Preference number: 6 (lower is better) Translates to: GLEVTSHRTEAI*GRGSGGRSLGR Trigger: CCTGCCCAGGCTCCGACCTCCACTTCCTCTCCCCAAAATGGCCTCGGTTCTGTGGGAAGTCACCTCCAGGCC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000043822.8 ENSMUST00000108449.9 |
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| CDS CCA 72 bp | TGCCTCCAGAAGATGTGGGCAGAGCCCTTGGTGAGCTaGTACAGGTGCCCACAGTACTTCCCAGCAGGGAAG | + |
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Preference number: 6 (lower is better) Translates to: CLQKMWAEPLVS*YRCPQYFPAGK Trigger: CTTCCCTGCTGGGAAGTACTGTGGGCACCTGTACCAGCTCACCAAGGGCTCTGCCCACATCTTCTGGAGGCA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000043822.8 ENSMUST00000108449.9 |
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| CDS CAA 72 bp | GCTGCCTGGTTTGTCCCTGTAGGCCTGCAGGCGTGTTaGGACCTCATCGTAGGTGAGGAAGGCCATGTAGCC | + |
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Preference number: 6 (lower is better) Translates to: AAWFVPVGLQAC*DLIVGEEGHVA Trigger: GGCTACATGGCCTTCCTCACCTACGATGAGGTCCAAACACGCCTGCAGGCCTACAGGGACAAACCAGGCAGC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000043822.8 ENSMUST00000108449.9 |
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| CDS CAA 90 bp | CACCGAACTCCACAATTCTGCCTCCAGAAGATGTGGGCAGAGCCCTaGGTGAGCTGGTACAGGTGCCCACAGTACTTCCCAGCAGGGAAG | + |
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Preference number: 6 (lower is better) Translates to: HRTPQFCLQKMWAEP*VSWYRCPQYFPAGK Trigger: CTTCCCTGCTGGGAAGTACTGTGGGCACCTGTACCAGCTCACCAAGGGCTCTGCCCACATCTTCTGGAGGCAGAATTGTGGAGTTCGGTG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000043822.8 ENSMUST00000108449.9 |
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| CDS TCA 72 bp | GCAGCAGTCCTGACCTCCGTTGGCCTCTCCTGTGCCTaGCAGATACTCACGGCCTCTCGACCTTTGATCTCA | + |
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Preference number: 6 (lower is better) Translates to: AAVLTSVGLSCA*QILTASRPLIS Trigger: TGAGATCAAAGGTCGAGAGGCCGTGAGTATCTGTCAGGCACAGGAGAGGCCAACGGAGGTCAGGACTGCTGC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000043822.8 ENSMUST00000108449.9 |
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| CDS CCA 72 bp | ACGCACCGAACTCCACAATTCTGCCTCCAGAAGATGTaGGCAGAGCCCTTGGTGAGCTGGTACAGGTGCCCA | + |
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Preference number: 6 (lower is better) Translates to: THRTPQFCLQKM*AEPLVSWYRCP Trigger: TGGGCACCTGTACCAGCTCACCAAGGGCTCTGCCCACATCTTCTGGAGGCAGAATTGTGGAGTTCGGTGCGT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000043822.8 ENSMUST00000108449.9 |
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| CDS TCA 72 bp | TTTCTGCTCAGCAGCCTCCTGGTGACAGTTGTCTCTTaGGCCATCTGCAGCAGTCCTGACCTCCGTTGGCCT | + |
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Preference number: 6 (lower is better) Translates to: FLLSSLLVTVVS*AICSSPDLRWP Trigger: AGGCCAACGGAGGTCAGGACTGCTGCAGATGGCTCAAGAGACAACTGTCACCAGGAGGCTGCTGAGCAGAAA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000043822.8 ENSMUST00000108449.9 |
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| CDS GCA 72 bp | ATCTGCAGCAGTCCTGACCTCCGTTGGCCTCTCCTGTaGCTGACAGATACTCACGGCCTCTCGACCTTTGAT | + |
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Preference number: 6 (lower is better) Translates to: ICSSPDLRWPLL*LTDTHGLSTFD Trigger: ATCAAAGGTCGAGAGGCCGTGAGTATCTGTCAGGCACAGGAGAGGCCAACGGAGGTCAGGACTGCTGCAGAT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000043822.8 ENSMUST00000108449.9 |
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| CDS GCA 72 bp | GACAGGTCTGGCTGTCTGAGTCCTCTGACACTTGGATaGGTTGGTAGGGTTCTACCCGGCAGAGCTCAGTCA | + |
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Preference number: 6 (lower is better) Translates to: DRSGCLSPLTLG*VGRVLPGRAQS Trigger: TGACTGAGCTCTGCCGGGTAGAACCCTACCAACGCATCCAAGTGTCAGAGGACTCAGACAGCCAGACCTGTC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000108449.9 |
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| CDS GCA 72 bp | CGATCCTCACGTCCTTGTCCCTCTCTGCGCAGATCTTaGACAGCTGGAACGTGGAGTTCATGGCTTGGTAGA | + |
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Preference number: 6 (lower is better) Translates to: RSSRPCPSLRRS*TAGTWSSWLGR Trigger: TCTACCAAGCCATGAACTCCACGTTCCAGCTGTGCAAGATCTGCGCAGAGAGGGACAAGGACGTGAGGATCG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000043822.8 |
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| CDS CCA 72 bp | AGCCTGGTGAAGACGTCAAACTCAAAGACAGACACGTaGCCGTTACAGGTGAGGTCCAAGGTGGACCGCAAG | + |
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Preference number: 6 (lower is better) Translates to: SLVKTSNSKTDT*PLQVRSKVDRK Trigger: CTTGCGGTCCACCTTGGACCTCACCTGTAACGGCCACGTGTCTGTCTTTGAGTTTGACGTCTTCACCAGGCT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000043822.8 ENSMUST00000108449.9 |
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| CDS CCA 72 bp | CGACCTTTGATCTCACAACGGCAGAAGGGACAGGTCTaGCTGTCTGAGTCCTCTGACACTTGGATGCGTTGG | + |
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Preference number: 6 (lower is better) Translates to: RPLISQRQKGQV*LSESSDTWMRW Trigger: CCAACGCATCCAAGTGTCAGAGGACTCAGACAGCCAGACCTGTCCCTTCTGCCGTTGTGAGATCAAAGGTCG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000108449.9 |
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| CDS CAA 90 bp | GAAGATATAGCTGCCTGGTTTGTCCCTGTAGGCCTGCAGGCGTGTTaGGACCTCATCGTAGGTGAGGAAGGCCATGTAGCCAGGATGGTT | + |
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Preference number: 6 (lower is better) Translates to: EDIAAWFVPVGLQAC*DLIVGEEGHVARMV Trigger: AACCATCCTGGCTACATGGCCTTCCTCACCTACGATGAGGTCCAAACACGCCTGCAGGCCTACAGGGACAAACCAGGCAGCTATATCTTC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000043822.8 ENSMUST00000108449.9 |
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| CDS CAA 90 bp | TCCCTTCAGGAGCACCTGCAGCAGAGGTTTGTTGAGAGGAATGGTTaGCAGGATGCTTCCATCGGAGCTCACGTATCCAATGGCCCACTG | + |
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Preference number: 6 (lower is better) Translates to: SLQEHLQQRFVERNG*QDASIGAHVSNGPL Trigger: CAGTGGGCCATTGGATACGTGAGCTCCGATGGAAGCATCCTGCAAACCATTCCTCTCAACAAACCTCTGCTGCAGGTGCTCCTGAAGGGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000043822.8 ENSMUST00000108449.9 |
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| CDS TCA 72 bp | GGAGTTCATGGCTTGGTAGAGCAGCAGTTGTTCCTCTaGCACTTGGATGCGTTGGTAGGGTTCTACCCGGCA | + |
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Preference number: 6 (lower is better) Translates to: GVHGLVEQQLFL*HLDALVGFYPA Trigger: TGCCGGGTAGAACCCTACCAACGCATCCAAGTGTCAGAGGAACAACTGCTGCTCTACCAAGCCATGAACTCC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000043822.8 |
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| CDS GCA 72 bp | CTTGGTAGAGCAGCAGTTGTTCCTCTGACACTTGGATaGGTTGGTAGGGTTCTACCCGGCAGAGCTCAGTCA | + |
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Preference number: 6 (lower is better) Translates to: LGRAAVVPLTLG*VGRVLPGRAQS Trigger: TGACTGAGCTCTGCCGGGTAGAACCCTACCAACGCATCCAAGTGTCAGAGGAACAACTGCTGCTCTACCAAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000043822.8 |
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| CDS CCA 72 bp | TGTCCCTCTCTGCGCAGATCTTGCACAGCTGGAACGTaGAGTTCATGGCTTGGTAGAGCAGCAGTTGTTCCT | + |
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Preference number: 6 (lower is better) Translates to: CPSLRRSCTAGT*SSWLGRAAVVP Trigger: AGGAACAACTGCTGCTCTACCAAGCCATGAACTCCACGTTCCAGCTGTGCAAGATCTGCGCAGAGAGGGACA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000043822.8 |
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| CDS CAA 90 bp | AAGATGCCGTCCTTTTGTCCCTTCAGGAGCACCTGCAGCAGAGGTTaGTTGAGAGGAATGGTTTGCAGGATGCTTCCATCGGAGCTCACG | + |
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Preference number: 6 (lower is better) Translates to: KMPSFCPFRSTCSRG*LRGMVCRMLPSELT Trigger: CGTGAGCTCCGATGGAAGCATCCTGCAAACCATTCCTCTCAACAAACCTCTGCTGCAGGTGCTCCTGAAGGGACAAAAGGACGGCATCTT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000043822.8 ENSMUST00000108449.9 |
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| CDS TCA 72 bp | TTTGTCCCTTCAGGAGCACCTGCAGCAGAGGTTTGTTaGGAGGAATGGTTTGCAGGATGCTTCCATCGGAGC | + |
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Preference number: 6 (lower is better) Translates to: FVPSGAPAAEVC*EEWFAGCFHRS Trigger: GCTCCGATGGAAGCATCCTGCAAACCATTCCTCTCAACAAACCTCTGCTGCAGGTGCTCCTGAAGGGACAAA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000043822.8 ENSMUST00000108449.9 |
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| CDS GCA 72 bp | AGGAAGATGCCGTCCTTTTGTCCCTTCAGGAGCACCTaGAGCAGAGGTTTGTTGAGAGGAATGGTTTGCAGG | + |
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Preference number: 6 (lower is better) Translates to: RKMPSFCPFRST*SRGLLRGMVCR Trigger: CCTGCAAACCATTCCTCTCAACAAACCTCTGCTGCAGGTGCTCCTGAAGGGACAAAAGGACGGCATCTTCCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000043822.8 ENSMUST00000108449.9 |
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| CDS CCA 72 bp | CTGCGCAGATCTTGCACAGCTGGAACGTGGAGTTCATaGCTTGGTAGAGCAGCAGTTGTTCCTCTGACACTT | + |
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Preference number: 6 (lower is better) Translates to: LRRSCTAGTWSS*LGRAAVVPLTL Trigger: AAGTGTCAGAGGAACAACTGCTGCTCTACCAAGCCATGAACTCCACGTTCCAGCTGTGCAAGATCTGCGCAG 53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000043822.8 |
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| CDS CAA 90 bp | ATGCCGTCCTTTTGTCCCTTCAGGAGCACCTGCAGCAGAGGTTTGTaGAGAGGAATGGTTTGCAGGATGCTTCCATCGGAGCTCACGTAT | + |
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Preference number: 6 (lower is better) Translates to: MPSFCPFRSTCSRGL*RGMVCRMLPSELTY Trigger: ATACGTGAGCTCCGATGGAAGCATCCTGCAAACCATTCCTCTCAACAAACCTCTGCTGCAGGTGCTCCTGAAGGGACAAAAGGACGGCAT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000043822.8 ENSMUST00000108449.9 |
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| CDS CAA 72 bp | TTTTGTCCCTTCAGGAGCACCTGCAGCAGAGGTTTGTaGAGAGGAATGGTTTGCAGGATGCTTCCATCGGAG | + |
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Preference number: 6 (lower is better) Translates to: FCPFRSTCSRGL*RGMVCRMLPSE Trigger: CTCCGATGGAAGCATCCTGCAAACCATTCCTCTCAACAAACCTCTGCTGCAGGTGCTCCTGAAGGGACAAAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000043822.8 ENSMUST00000108449.9 |
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| CDS CAA 72 bp | TCCTTTTGTCCCTTCAGGAGCACCTGCAGCAGAGGTTaGTTGAGAGGAATGGTTTGCAGGATGCTTCCATCG | + |
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Preference number: 6 (lower is better) Translates to: SFCPFRSTCSRG*LRGMVCRMLPS Trigger: CGATGGAAGCATCCTGCAAACCATTCCTCTCAACAAACCTCTGCTGCAGGTGCTCCTGAAGGGACAAAAGGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000043822.8 ENSMUST00000108449.9 |
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| CDS CAA 90 bp | TGGGTTGTGTTTCTTTCCATCAGGGAAGAGGAAGATGCCGTCCTTTaGTCCCTTCAGGAGCACCTGCAGCAGAGGTTTGTTGAGAGGAAT | + |
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Preference number: 6 (lower is better) Translates to: WVVFLSIREEEDAVL*SLQEHLQQRFVERN Trigger: ATTCCTCTCAACAAACCTCTGCTGCAGGTGCTCCTGAAGGGACAAAAGGACGGCATCTTCCTCTTCCCTGATGGAAAGAAACACAACCCA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000043822.8 ENSMUST00000108449.9 |
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| CDS CAA 72 bp | TTTCTTTCCATCAGGGAAGAGGAAGATGCCGTCCTTTaGTCCCTTCAGGAGCACCTGCAGCAGAGGTTTGTT | + |
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Preference number: 6 (lower is better) Translates to: FLSIREEEDAVL*SLQEHLQQRFV Trigger: AACAAACCTCTGCTGCAGGTGCTCCTGAAGGGACAAAAGGACGGCATCTTCCTCTTCCCTGATGGAAAGAAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000043822.8 ENSMUST00000108449.9 |
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