Pregenerated sensors for CBFB (Mus musculus)
Ensembl gene IDs: ENSMUSG00000031885Ensembl transcript IDs: ENSMUST00000052209.9, ENSMUST00000109392.9, ENSMUST00000109394.3, ENSMUST00000109395.8
Found 106 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | ACATTAACACCATGTGATCTTACTGACTGCCGGACTGGAAGCTCTTaGCGAGAAGCAACAGAGAAAATGTACCACCGAGATGTTATTTTA | + |
|
Preference number: 1 (lower is better) Translates to: TLTPCDLTDCRTGSS*REATEKMYHRDVIL Trigger: TAAAATAACATCTCGGTGGTACATTTTCTCTGTTGCTTCTCGCCAAGAGCTTCCAGTCCGGCAGTCAGTAAGATCACATGGTGTTAATGT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000052209.9 ENSMUST00000109392.9 ENSMUST00000109394.3 ENSMUST00000109395.8 |
||
| 3UTR GCA 90 bp | ATCTGTGAATGTTTTGCCCGGAATCAATGGGAGAAATGCATCTTCTaGCCAGATGAACATTTTCTAAGACTCATCTTCATCACCCAATTT | + |
|
Preference number: 1 (lower is better) Translates to: ICECFARNQWEKCIF*PDEHFLRLIFITQF Trigger: AAATTGGGTGATGAAGATGAGTCTTAGAAAATGTTCATCTGGGCAGAAGATGCATTTCTCCCATTGATTCCGGGCAAAACATTCACAGAT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000052209.9 ENSMUST00000109392.9 ENSMUST00000109394.3 ENSMUST00000109395.8 |
||
| 3UTR GCA 90 bp | ATCATCTATATCTGTGAATGTTTTGCCCGGAATCAATGGGAGAAATaGATCTTCTGCCCAGATGAACATTTTCTAAGACTCATCTTCATC | + |
|
Preference number: 1 (lower is better) Translates to: IIYICECFARNQWEK*IFCPDEHFLRLIFI Trigger: GATGAAGATGAGTCTTAGAAAATGTTCATCTGGGCAGAAGATGCATTTCTCCCATTGATTCCGGGCAAAACATTCACAGATATAGATGAT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000052209.9 ENSMUST00000109392.9 ENSMUST00000109394.3 ENSMUST00000109395.8 |
||
| 3UTR-3UTR TCA 90 bp | TTTGCCCGGAATCAATGGGAGAAATGCATCTTCTGCCCAGATGAACATTTTCTAAACCATGGCAGTGGGTaGCGTCTTCACTGCCTCAGG | + |
|
Preference number: 2 (lower is better) Translates to: FARNQWEKCIFCPDEHFLNHGSG*RLHCLR Trigger: CCTGAGGCAGTGAAGACGTCACCCACTGCCATGGTT...TAGAAAATGTTCATCTGGGCAGAAGATGCATTTCTCCCATTGATTCCGGGCAAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000052209.9 ENSMUST00000109392.9 ENSMUST00000109394.3 ENSMUST00000109395.8 |
||
| 3UTR-3UTR TCA 90 bp | AAGGAGTTTATGATCTTAACGCCAGCATTAAGACAGACAGAAGCAGTGCAGAACAACCATGGCAGTGGGTaGCGTCTTCACTGCCTCAGG | + |
|
Preference number: 2 (lower is better) Translates to: KEFMILTPALRQTEAVQNNHGSG*RLHCLR Trigger: CCTGAGGCAGTGAAGACGTCACCCACTGCCATGGTT...GTTCTGCACTGCTTCTGTCTGTCTTAATGCTGGCGTTAAGATCATAAACTCCTT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000052209.9 ENSMUST00000109392.9 ENSMUST00000109394.3 ENSMUST00000109395.8 |
||
| 3UTR-3UTR TCA 90 bp | TACCGAAGAAAAGGAGTTTATGATCTTAACGCCAGCATTAAGACAGACAGAAGCAACCATGGCAGTGGGTaGCGTCTTCACTGCCTCAGG | + |
|
Preference number: 2 (lower is better) Translates to: YRRKGVYDLNASIKTDRSNHGSG*RLHCLR Trigger: CCTGAGGCAGTGAAGACGTCACCCACTGCCATGGTT...GCTTCTGTCTGTCTTAATGCTGGCGTTAAGATCATAAACTCCTTTTCTTCGGTA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000052209.9 ENSMUST00000109392.9 ENSMUST00000109394.3 ENSMUST00000109395.8 |
||
| 3UTR-3UTR CCA 90 bp | GTGGCTTTAACAACTGTAAACGTTTGTTTTAGGAGGCTGTGGCAGACAGCTCTAGCAAAACCATGGCAGTaGGTGACGTCTTCACTGCCT | + |
|
Preference number: 2 (lower is better) Translates to: VALTTVNVCFRRLWQTALAKPWQ*VTSSLP Trigger: AGGCAGTGAAGACGTCACCCACTGCCATGGTTTTGC...TAGAGCTGTCTGCCACAGCCTCCTAAAACAAACGTTTACAGTTGTTAAAGCCAC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000052209.9 ENSMUST00000109392.9 ENSMUST00000109394.3 ENSMUST00000109395.8 |
||
| 3UTR-3UTR TCA 90 bp | AATACCATCATCTATATCTGTGAATGTTTTGCCCGGAATCAATGGGAGAAATGCAACCATGGCAGTGGGTaGCGTCTTCACTGCCTCAGG | + |
|
Preference number: 2 (lower is better) Translates to: NTIIYICECFARNQWEKCNHGSG*RLHCLR Trigger: CCTGAGGCAGTGAAGACGTCACCCACTGCCATGGTT...GCATTTCTCCCATTGATTCCGGGCAAAACATTCACAGATATAGATGATGGTATT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000052209.9 ENSMUST00000109392.9 ENSMUST00000109394.3 ENSMUST00000109395.8 |
||
| 3UTR-3UTR CCA 90 bp | TTTGCCCGGAATCAATGGGAGAAATGCATCTTCTGCCCAGATGAACATTTTCTAGCAAAACCATGGCAGTaGGTGACGTCTTCACTGCCT | + |
|
Preference number: 2 (lower is better) Translates to: FARNQWEKCIFCPDEHFLAKPWQ*VTSSLP Trigger: AGGCAGTGAAGACGTCACCCACTGCCATGGTTTTGC...TAGAAAATGTTCATCTGGGCAGAAGATGCATTTCTCCCATTGATTCCGGGCAAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000052209.9 ENSMUST00000109392.9 ENSMUST00000109394.3 ENSMUST00000109395.8 |
||
| 3UTR-3UTR CCA 90 bp | ACATTTGCTATTTACAGAGGGACGGCCACATTAACACCATGTGATCTTACTGACGCAAAACCATGGCAGTaGGTGACGTCTTCACTGCCT | + |
|
Preference number: 2 (lower is better) Translates to: TFAIYRGTATLTPCDLTDAKPWQ*VTSSLP Trigger: AGGCAGTGAAGACGTCACCCACTGCCATGGTTTTGC...GTCAGTAAGATCACATGGTGTTAATGTGGCCGTCCCTCTGTAAATAGCAAATGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000052209.9 ENSMUST00000109392.9 ENSMUST00000109394.3 ENSMUST00000109395.8 |
||
| 3UTR-3UTR TCA 90 bp | ACAGTAAAGCTAACGGCAAAGCAATCTGGAAGCTTAAGGCAAGTTTTAATGGAGGAGGCATCAGGGCACTaGGAGTGTAAACATGTGAGC | + |
|
Preference number: 2 (lower is better) Translates to: TVKLTAKQSGSLRQVLMEEASGH*ECKHVS Trigger: GCTCACATGTTTACACTCTCAGTGCCCTGATGCCTC...CTCCATTAAAACTTGCCTTAAGCTTCCAGATTGCTTTGCCGTTAGCTTTACTGT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000052209.9 ENSMUST00000109392.9 ENSMUST00000109394.3 ENSMUST00000109395.8 |
||
| 3UTR-3UTR CCA 90 bp | TACCGAAGAAAAGGAGTTTATGATCTTAACGCCAGCATTAAGACAGACAGAAGCGCAAAACCATGGCAGTaGGTGACGTCTTCACTGCCT | + |
|
Preference number: 2 (lower is better) Translates to: YRRKGVYDLNASIKTDRSAKPWQ*VTSSLP Trigger: AGGCAGTGAAGACGTCACCCACTGCCATGGTTTTGC...GCTTCTGTCTGTCTTAATGCTGGCGTTAAGATCATAAACTCCTTTTCTTCGGTA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000052209.9 ENSMUST00000109392.9 ENSMUST00000109394.3 ENSMUST00000109395.8 |
||
| 3UTR-3UTR TCA 90 bp | ACATTTGCTATTTACAGAGGGACGGCCACATTAACACCATGTGATCTTACTGACATTTACCTGTGTAGCTaGTTTATCACTGCCTCCAGT | + |
|
Preference number: 2 (lower is better) Translates to: TFAIYRGTATLTPCDLTDIYLCS*FITASS Trigger: ACTGGAGGCAGTGATAAATCAGCTACACAGGTAAAT...GTCAGTAAGATCACATGGTGTTAATGTGGCCGTCCCTCTGTAAATAGCAAATGT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000052209.9 ENSMUST00000109392.9 ENSMUST00000109394.3 ENSMUST00000109395.8 |
||
| 3UTR-3UTR TCA 90 bp | AATACCATCATCTATATCTGTGAATGTTTTGCCCGGAATCAATGGGAGAAATGCCCACTTAACGAAGTTTaGGATCATCACCGCCACCTA | + |
|
Preference number: 2 (lower is better) Translates to: NTIIYICECFARNQWEKCPLNEV*DHHRHL Trigger: TAGGTGGCGGTGATGATCTCAAACTTCGTTAAGTGG...GCATTTCTCCCATTGATTCCGGGCAAAACATTCACAGATATAGATGATGGTATT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000109392.9 |
||
| 3UTR-3UTR TCA 90 bp | AAGGAGTTTATGATCTTAACGCCAGCATTAAGACAGACAGAAGCAGTGCAGAACCATCATCTATATCTGTaGATGTTTTGCCCGGAATCA | + |
|
Preference number: 2 (lower is better) Translates to: KEFMILTPALRQTEAVQNHHLYL*MFCPES Trigger: TGATTCCGGGCAAAACATTCACAGATATAGATGATG...GTTCTGCACTGCTTCTGTCTGTCTTAATGCTGGCGTTAAGATCATAAACTCCTT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000052209.9 ENSMUST00000109392.9 ENSMUST00000109394.3 ENSMUST00000109395.8 |
||
| 3UTR-3UTR TCA 90 bp | GCAAATTCATTCATAGTGCTCAGTAACACAAGGTCAGCATCAGCTTCTGTAACAGTAAGCATGTGCCAATaGCTTAGCACTTTTTCCAGT | + |
|
Preference number: 2 (lower is better) Translates to: ANSFIVLSNTRSASASVTVSMCQ*LSTFSS Trigger: ACTGGAAAAAGTGCTAAGTCATTGGCACATGCTTAC...TGTTACAGAAGCTGATGCTGACCTTGTGTTACTGAGCACTATGAATGAATTTGC 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000052209.9 ENSMUST00000109392.9 ENSMUST00000109394.3 ENSMUST00000109395.8 |
||
| 3UTR-3UTR TCA 90 bp | ACATTTGCTATTTACAGAGGGACGGCCACATTAACACCATGTGATCTTACTGACGAGAGTGTAAACATGTaGGCTGTACAACACCAAATA | + |
|
Preference number: 2 (lower is better) Translates to: TFAIYRGTATLTPCDLTDESVNM*AVQHQI Trigger: TATTTGGTGTTGTACAGCTCACATGTTTACACTCTC...GTCAGTAAGATCACATGGTGTTAATGTGGCCGTCCCTCTGTAAATAGCAAATGT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000052209.9 ENSMUST00000109392.9 ENSMUST00000109394.3 ENSMUST00000109395.8 |
||
| 3UTR-3UTR CCA 90 bp | CTGTACAACACCAAATACCAAGCAAATTCATTCATAGTGCTCAGTAACACAAGGTATAGTGCAAAACCATaGCAGTGGGTGACGTCTTCA | + |
|
Preference number: 2 (lower is better) Translates to: LYNTKYQANSFIVLSNTRYSAKP*QWVTSS Trigger: TGAAGACGTCACCCACTGCCATGGTTTTGCACTATA...CCTTGTGTTACTGAGCACTATGAATGAATTTGCTTGGTATTTGGTGTTGTACAG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000052209.9 ENSMUST00000109392.9 ENSMUST00000109394.3 ENSMUST00000109395.8 |
||
| 3UTR-3UTR TCA 90 bp | ACAGTAAAGCTAACGGCAAAGCAATCTGGAAGCTTAAGGCAAGTTTTAATGGAGCATCTTCTGCCCAGATaGACATTTTCTAAGACTCAT | + |
|
Preference number: 2 (lower is better) Translates to: TVKLTAKQSGSLRQVLMEHLLPR*TFSKTH Trigger: ATGAGTCTTAGAAAATGTTCATCTGGGCAGAAGATG...CTCCATTAAAACTTGCCTTAAGCTTCCAGATTGCTTTGCCGTTAGCTTTACTGT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000052209.9 ENSMUST00000109392.9 ENSMUST00000109394.3 ENSMUST00000109395.8 |
||
| 3UTR-3UTR TCA 90 bp | ACAGTAAAGCTAACGGCAAAGCAATCTGGAAGCTTAAGGCAAGTTTTAATGGAGCATCATCTATATCTGTaGATGTTTTGCCCGGAATCA | + |
|
Preference number: 2 (lower is better) Translates to: TVKLTAKQSGSLRQVLMEHHLYL*MFCPES Trigger: TGATTCCGGGCAAAACATTCACAGATATAGATGATG...CTCCATTAAAACTTGCCTTAAGCTTCCAGATTGCTTTGCCGTTAGCTTTACTGT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000052209.9 ENSMUST00000109392.9 ENSMUST00000109394.3 ENSMUST00000109395.8 |
||
| 3UTR-3UTR TCA 90 bp | ACAGTAAAGCTAACGGCAAAGCAATCTGGAAGCTTAAGGCAAGTTTTAATGGAGGAGAGTGTAAACATGTaGGCTGTACAACACCAAATA | + |
|
Preference number: 2 (lower is better) Translates to: TVKLTAKQSGSLRQVLMEESVNM*AVQHQI Trigger: TATTTGGTGTTGTACAGCTCACATGTTTACACTCTC...CTCCATTAAAACTTGCCTTAAGCTTCCAGATTGCTTTGCCGTTAGCTTTACTGT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000052209.9 ENSMUST00000109392.9 ENSMUST00000109394.3 ENSMUST00000109395.8 |
||
| 3UTR-3UTR GCA 90 bp | ACATTTGCTATTTACAGAGGGACGGCCACATTAACACCATGTGATCTTACTGACGAGAAATGCATCTTCTaGCCAGATGAACATTTTCTA | + |
|
Preference number: 2 (lower is better) Translates to: TFAIYRGTATLTPCDLTDEKCIF*PDEHFL Trigger: TAGAAAATGTTCATCTGGGCAGAAGATGCATTTCTC...GTCAGTAAGATCACATGGTGTTAATGTGGCCGTCCCTCTGTAAATAGCAAATGT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000052209.9 ENSMUST00000109392.9 ENSMUST00000109394.3 ENSMUST00000109395.8 |
||
| 3UTR-3UTR TCA 90 bp | ACATGTGAGCTGTACAACACCAAATACCAAGCAAATTCATTCATAGTGCTCAGTCATCTTCTGCCCAGATaGACATTTTCTAAGACTCAT | + |
|
Preference number: 2 (lower is better) Translates to: TCELYNTKYQANSFIVLSHLLPR*TFSKTH Trigger: ATGAGTCTTAGAAAATGTTCATCTGGGCAGAAGATG...ACTGAGCACTATGAATGAATTTGCTTGGTATTTGGTGTTGTACAGCTCACATGT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000052209.9 ENSMUST00000109392.9 ENSMUST00000109394.3 ENSMUST00000109395.8 |
||
| 3UTR-3UTR TCA 90 bp | CTGTACAACACCAAATACCAAGCAAATTCATTCATAGTGCTCAGTAACACAAGGCATCTTCTGCCCAGATaGACATTTTCTAAGACTCAT | + |
|
Preference number: 2 (lower is better) Translates to: LYNTKYQANSFIVLSNTRHLLPR*TFSKTH Trigger: ATGAGTCTTAGAAAATGTTCATCTGGGCAGAAGATG...CCTTGTGTTACTGAGCACTATGAATGAATTTGCTTGGTATTTGGTGTTGTACAG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000052209.9 ENSMUST00000109392.9 ENSMUST00000109394.3 ENSMUST00000109395.8 |
||
| 3UTR-3UTR TCA 90 bp | AATACCATCATCTATATCTGTGAATGTTTTGCCCGGAATCAATGGGAGAAATGCCATCTTCTGCCCAGATaGACATTTTCTAAGACTCAT | + |
|
Preference number: 2 (lower is better) Translates to: NTIIYICECFARNQWEKCHLLPR*TFSKTH Trigger: ATGAGTCTTAGAAAATGTTCATCTGGGCAGAAGATG...GCATTTCTCCCATTGATTCCGGGCAAAACATTCACAGATATAGATGATGGTATT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000052209.9 ENSMUST00000109392.9 ENSMUST00000109394.3 ENSMUST00000109395.8 |
||
| 3UTR-3UTR TCA 90 bp | ATTAAGACAGACAGAAGCAGTGCAGAACCAGTAAGGAACATTTGCTATTTACAGGAGAGTGTAAACATGTaGGCTGTACAACACCAAATA | + |
|
Preference number: 2 (lower is better) Translates to: IKTDRSSAEPVRNICYLQESVNM*AVQHQI Trigger: TATTTGGTGTTGTACAGCTCACATGTTTACACTCTC...CTGTAAATAGCAAATGTTCCTTACTGGTTCTGCACTGCTTCTGTCTGTCTTAAT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000052209.9 ENSMUST00000109392.9 ENSMUST00000109394.3 ENSMUST00000109395.8 |
||
| 3UTR-3UTR GCA 90 bp | ACAGTAAAGCTAACGGCAAAGCAATCTGGAAGCTTAAGGCAAGTTTTAATGGAGGAGAAATGCATCTTCTaGCCAGATGAACATTTTCTA | + |
|
Preference number: 2 (lower is better) Translates to: TVKLTAKQSGSLRQVLMEEKCIF*PDEHFL Trigger: TAGAAAATGTTCATCTGGGCAGAAGATGCATTTCTC...CTCCATTAAAACTTGCCTTAAGCTTCCAGATTGCTTTGCCGTTAGCTTTACTGT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000052209.9 ENSMUST00000109392.9 ENSMUST00000109394.3 ENSMUST00000109395.8 |
||
| 3UTR-3UTR GCA 90 bp | GCAAATTCATTCATAGTGCTCAGTAACACAAGGTCAGCATCAGCTTCTGTAACAGCCTCCAGTTTAATATaGTGTTACATACAACAAGTT | + |
|
Preference number: 2 (lower is better) Translates to: ANSFIVLSNTRSASASVTASSLI*CYIQQV Trigger: AACTTGTTGTATGTAACAGCATATTAAACTGGAGGC...TGTTACAGAAGCTGATGCTGACCTTGTGTTACTGAGCACTATGAATGAATTTGC 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000052209.9 ENSMUST00000109392.9 ENSMUST00000109394.3 ENSMUST00000109395.8 |
||
| 3UTR-3UTR GCA 90 bp | ACATGTGAGCTGTACAACACCAAATACCAAGCAAATTCATTCATAGTGCTCAGTGCCTCCAGTTTAATATaGTGTTACATACAACAAGTT | + |
|
Preference number: 2 (lower is better) Translates to: TCELYNTKYQANSFIVLSASSLI*CYIQQV Trigger: AACTTGTTGTATGTAACAGCATATTAAACTGGAGGC...ACTGAGCACTATGAATGAATTTGCTTGGTATTTGGTGTTGTACAGCTCACATGT 37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000052209.9 ENSMUST00000109392.9 ENSMUST00000109394.3 ENSMUST00000109395.8 |
||
| 3UTR-3UTR GCA 90 bp | AATACCATCATCTATATCTGTGAATGTTTTGCCCGGAATCAATGGGAGAAATGCGCCTCCAGTTTAATATaGTGTTACATACAACAAGTT | + |
|
Preference number: 2 (lower is better) Translates to: NTIIYICECFARNQWEKCASSLI*CYIQQV Trigger: AACTTGTTGTATGTAACAGCATATTAAACTGGAGGC...GCATTTCTCCCATTGATTCCGGGCAAAACATTCACAGATATAGATGATGGTATT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000052209.9 ENSMUST00000109392.9 ENSMUST00000109394.3 ENSMUST00000109395.8 |
||
| 3UTR GCA 72 bp | ACAGACAGAAGCAGTGCAGAACCAGTAAGGAACATTTaGTATTTACAGAGGGACGGCCACATTAACACCATG | + |
|
Preference number: 3 (lower is better) Translates to: TDRSSAEPVRNI*YLQRDGHINTM Trigger: CATGGTGTTAATGTGGCCGTCCCTCTGTAAATAGCAAATGTTCCTTACTGGTTCTGCACTGCTTCTGTCTGT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000052209.9 ENSMUST00000109392.9 ENSMUST00000109394.3 ENSMUST00000109395.8 |
||
| 3UTR TCA 72 bp | CCGGAATCAATGGGAGAAATGCATCTTCTGCCCAGATaGACATTTTCTAAGACTCATCTTCATCACCCAATT | + |
|
Preference number: 3 (lower is better) Translates to: PESMGEMHLLPR*TFSKTHLHHPI Trigger: AATTGGGTGATGAAGATGAGTCTTAGAAAATGTTCATCTGGGCAGAAGATGCATTTCTCCCATTGATTCCGG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000052209.9 ENSMUST00000109392.9 ENSMUST00000109394.3 ENSMUST00000109395.8 |
||
| 3UTR GCA 72 bp | TGTTTTGCCCGGAATCAATGGGAGAAATGCATCTTCTaGCCAGATGAACATTTTCTAAGACTCATCTTCATC | + |
|
Preference number: 3 (lower is better) Translates to: CFARNQWEKCIF*PDEHFLRLIFI Trigger: GATGAAGATGAGTCTTAGAAAATGTTCATCTGGGCAGAAGATGCATTTCTCCCATTGATTCCGGGCAAAACA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000052209.9 ENSMUST00000109392.9 ENSMUST00000109394.3 ENSMUST00000109395.8 |
||
| 3UTR-3UTR CAA 90 bp | ACATGTGAGCTGTACAACACCAAATACCAAGCAAATTCATTCATAGTGCTCAGTGGTGACTATCAGCATTaGAAAGGATACTGTGGCTTT | + |
|
Preference number: 3 (lower is better) Translates to: TCELYNTKYQANSFIVLSGDYQH*KGYCGF Trigger: AAAGCCACAGTATCCTTTCAAATGCTGATAGTCACC...ACTGAGCACTATGAATGAATTTGCTTGGTATTTGGTGTTGTACAGCTCACATGT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000052209.9 ENSMUST00000109392.9 ENSMUST00000109394.3 ENSMUST00000109395.8 |
||
| 3UTR-3UTR CAA 90 bp | ATTAAGACAGACAGAAGCAGTGCAGAACCAGTAAGGAACATTTGCTATTTACAGGGTGACTATCAGCATTaGAAAGGATACTGTGGCTTT | + |
|
Preference number: 3 (lower is better) Translates to: IKTDRSSAEPVRNICYLQGDYQH*KGYCGF Trigger: AAAGCCACAGTATCCTTTCAAATGCTGATAGTCACC...CTGTAAATAGCAAATGTTCCTTACTGGTTCTGCACTGCTTCTGTCTGTCTTAAT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000052209.9 ENSMUST00000109392.9 ENSMUST00000109394.3 ENSMUST00000109395.8 |
||
| 3UTR-3UTR CAA 90 bp | TGCCTCCAGTTTAATATGCTGTTACATACAACAAGTTCCAGTATCCTTTTTCTGGGTGACTATCAGCATTaGAAAGGATACTGTGGCTTT | + |
|
Preference number: 3 (lower is better) Translates to: CLQFNMLLHTTSSSILFLGDYQH*KGYCGF Trigger: AAAGCCACAGTATCCTTTCAAATGCTGATAGTCACC...CAGAAAAAGGATACTGGAACTTGTTGTATGTAACAGCATATTAAACTGGAGGCA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000052209.9 ENSMUST00000109392.9 ENSMUST00000109394.3 ENSMUST00000109395.8 |
||
| 3UTR-3UTR CAA 90 bp | GCAAATTCATTCATAGTGCTCAGTAACACAAGGTCAGCATCAGCTTCTGTAACACTTCATCACCCAATTTaGTTTCTACAAAAGCATGCA | + |
|
Preference number: 3 (lower is better) Translates to: ANSFIVLSNTRSASASVTLHHPI*FLQKHA Trigger: TGCATGCTTTTGTAGAAACAAAATTGGGTGATGAAG...TGTTACAGAAGCTGATGCTGACCTTGTGTTACTGAGCACTATGAATGAATTTGC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000052209.9 ENSMUST00000109392.9 ENSMUST00000109394.3 ENSMUST00000109395.8 |
||
| 3UTR CCA 72 bp | ATCATCTATATCTGTGAATGTTTTGCCCGGAATCAATaGGAGAAATGCATCTTCTGCCCAGATGAACATTTT | + |
|
Preference number: 3 (lower is better) Translates to: IIYICECFARNQ*EKCIFCPDEHF Trigger: AAAATGTTCATCTGGGCAGAAGATGCATTTCTCCCATTGATTCCGGGCAAAACATTCACAGATATAGATGAT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000052209.9 ENSMUST00000109392.9 ENSMUST00000109394.3 ENSMUST00000109395.8 |
||
| 3UTR-3UTR CAA 90 bp | TTCATAGTGCTCAGTAACACAAGGTCAGCATCAGCTTCTGTAACACATTATTGTCTTCATCACCCAATTTaGTTTCTACAAAAGCATGCA | + |
|
Preference number: 3 (lower is better) Translates to: FIVLSNTRSASASVTHYCLHHPI*FLQKHA Trigger: TGCATGCTTTTGTAGAAACAAAATTGGGTGATGAAG...ACAATAATGTGTTACAGAAGCTGATGCTGACCTTGTGTTACTGAGCACTATGAA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000052209.9 ENSMUST00000109392.9 ENSMUST00000109394.3 ENSMUST00000109395.8 |
||
| CDS-3UTR CCA 90 bp | TGCAGGCATTATAGTGCAAAACCATGGCAGTGGGTGACGTCTTCACTGCCTCAGGTCTGGCGCTCCTCGTaGGGCCGGTCCCTGAAGCCC | + |
|
Preference number: 4 (lower is better) Translates to: CRHYSAKPWQWVTSSLPQVWRSS*GRSLKP Trigger: GGGCTTCAGGGACCGGCCCCACGAGGAGCGCCAGAC...CTGAGGCAGTGAAGACGTCACCCACTGCCATGGTTTTGCACTATAATGCCTGCA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000052209.9 ENSMUST00000109392.9 ENSMUST00000109394.3 ENSMUST00000109395.8 |
||
| CDS-3UTR CCA 90 bp | CCAGTCTGTGGCTTCTTTGGGCATTTCTGTAGAGCATTCTCACCTGTGAAGAGCGTCTGGCGCTCCTCGTaGGGCCGGTCCCTGAAGCCC | + |
|
Preference number: 4 (lower is better) Translates to: PVCGFFGHFCRAFSPVKSVWRSS*GRSLKP Trigger: GGGCTTCAGGGACCGGCCCCACGAGGAGCGCCAGAC...GCTCTTCACAGGTGAGAATGCTCTACAGAAATGCCCAAAGAAGCCACAGACTGG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000052209.9 ENSMUST00000109392.9 ENSMUST00000109394.3 ENSMUST00000109395.8 |
||
| CDS-3UTR CCA 90 bp | TGCAGGCATTATAGTGCAAAACCATGGCAGTGGGTGACGTCTTCACTGCCTCAGTCGAACTTGCTCCTCTaGTCCGGGACGACGCGCGGC | + |
|
Preference number: 4 (lower is better) Translates to: CRHYSAKPWQWVTSSLPQSNLLL*SGTTRG Trigger: GCCGCGCGTCGTCCCGGACCAGAGGAGCAAGTTCGA...CTGAGGCAGTGAAGACGTCACCCACTGCCATGGTTTTGCACTATAATGCCTGCA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000052209.9 ENSMUST00000109392.9 ENSMUST00000109394.3 ENSMUST00000109395.8 |
||
| CDS-3UTR CCA 90 bp | TGCAGGCATTATAGTGCAAAACCATGGCAGTGGGTGACGTCTTCACTGCCTCAGTTCTGGAAGCGTGTCTaGCGCTCCTCGTGGGGCCGG | + |
|
Preference number: 4 (lower is better) Translates to: CRHYSAKPWQWVTSSLPQFWKRV*RSSWGR Trigger: CCGGCCCCACGAGGAGCGCCAGACACGCTTCCAGAA...CTGAGGCAGTGAAGACGTCACCCACTGCCATGGTTTTGCACTATAATGCCTGCA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000052209.9 ENSMUST00000109392.9 ENSMUST00000109394.3 ENSMUST00000109395.8 |
||
| CDS-3UTR CCA 90 bp | CCAGTCTGTGGCTTCTTTGGGCATTTCTGTAGAGCATTCTCACCTGTGAAGAGCTTCTGGAAGCGTGTCTaGCGCTCCTCGTGGGGCCGG | + |
|
Preference number: 4 (lower is better) Translates to: PVCGFFGHFCRAFSPVKSFWKRV*RSSWGR Trigger: CCGGCCCCACGAGGAGCGCCAGACACGCTTCCAGAA...GCTCTTCACAGGTGAGAATGCTCTACAGAAATGCCCAAAGAAGCCACAGACTGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000052209.9 ENSMUST00000109392.9 ENSMUST00000109394.3 ENSMUST00000109395.8 |
||
| CDS-3UTR CCA 90 bp | ACATTTGCTATTTACAGAGGGACGGCCACATTAACACCATGTGATCTTACTGACTCGAACTTGCTCCTCTaGTCCGGGACGACGCGCGGC | + |
|
Preference number: 4 (lower is better) Translates to: TFAIYRGTATLTPCDLTDSNLLL*SGTTRG Trigger: GCCGCGCGTCGTCCCGGACCAGAGGAGCAAGTTCGA...GTCAGTAAGATCACATGGTGTTAATGTGGCCGTCCCTCTGTAAATAGCAAATGT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000052209.9 ENSMUST00000109392.9 ENSMUST00000109394.3 ENSMUST00000109395.8 |
||
| CDS-3UTR CCA 90 bp | ACATTTGCTATTTACAGAGGGACGGCCACATTAACACCATGTGATCTTACTGACTTCTGGAAGCGTGTCTaGCGCTCCTCGTGGGGCCGG | + |
|
Preference number: 4 (lower is better) Translates to: TFAIYRGTATLTPCDLTDFWKRV*RSSWGR Trigger: CCGGCCCCACGAGGAGCGCCAGACACGCTTCCAGAA...GTCAGTAAGATCACATGGTGTTAATGTGGCCGTCCCTCTGTAAATAGCAAATGT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000052209.9 ENSMUST00000109392.9 ENSMUST00000109394.3 ENSMUST00000109395.8 |
||
| CDS-3UTR CCA 90 bp | TGCAGGCATTATAGTGCAAAACCATGGCAGTGGGTGACGTCTTCACTGCCTCAGTGCTGTCTTCTTGCCTaGGCTCGCTCCTCATCAAAC | + |
|
Preference number: 4 (lower is better) Translates to: CRHYSAKPWQWVTSSLPQCCLLA*ARSSSN Trigger: GTTTGATGAGGAGCGAGCCCAGGCAAGAAGACAGCA...CTGAGGCAGTGAAGACGTCACCCACTGCCATGGTTTTGCACTATAATGCCTGCA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000109395.8 |
||
| CDS-3UTR CCA 90 bp | ACAGTAAAGCTAACGGCAAAGCAATCTGGAAGCTTAAGGCAAGTTTTAATGGAGTCGAACTTGCTCCTCTaGTCCGGGACGACGCGCGGC | + |
|
Preference number: 4 (lower is better) Translates to: TVKLTAKQSGSLRQVLMESNLLL*SGTTRG Trigger: GCCGCGCGTCGTCCCGGACCAGAGGAGCAAGTTCGA...CTCCATTAAAACTTGCCTTAAGCTTCCAGATTGCTTTGCCGTTAGCTTTACTGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000052209.9 ENSMUST00000109392.9 ENSMUST00000109394.3 ENSMUST00000109395.8 |
||
| CDS-3UTR CCA 90 bp | TACCGAAGAAAAGGAGTTTATGATCTTAACGCCAGCATTAAGACAGACAGAAGCTTCTGGAAGCGTGTCTaGCGCTCCTCGTGGGGCCGG | + |
|
Preference number: 4 (lower is better) Translates to: YRRKGVYDLNASIKTDRSFWKRV*RSSWGR Trigger: CCGGCCCCACGAGGAGCGCCAGACACGCTTCCAGAA...GCTTCTGTCTGTCTTAATGCTGGCGTTAAGATCATAAACTCCTTTTCTTCGGTA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000052209.9 ENSMUST00000109392.9 ENSMUST00000109394.3 ENSMUST00000109395.8 |
||
| CDS-3UTR CCA 90 bp | ATTAAGACAGACAGAAGCAGTGCAGAACCAGTAAGGAACATTTGCTATTTACAGTCGCGGCAGGCGTTCTaGAAGCGTGTCTGGCGCTCC | + |
|
Preference number: 4 (lower is better) Translates to: IKTDRSSAEPVRNICYLQSRQAF*KRVWRS Trigger: GGAGCGCCAGACACGCTTCCAGAACGCCTGCCGCGA...CTGTAAATAGCAAATGTTCCTTACTGGTTCTGCACTGCTTCTGTCTGTCTTAAT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000052209.9 ENSMUST00000109392.9 ENSMUST00000109394.3 ENSMUST00000109395.8 |
||
| CDS-3UTR CCA 90 bp | TTCATAGTGCTCAGTAACACAAGGTCAGCATCAGCTTCTGTAACACATTATTGTTCGCGGCAGGCGTTCTaGAAGCGTGTCTGGCGCTCC | + |
|
Preference number: 4 (lower is better) Translates to: FIVLSNTRSASASVTHYCSRQAF*KRVWRS Trigger: GGAGCGCCAGACACGCTTCCAGAACGCCTGCCGCGA...ACAATAATGTGTTACAGAAGCTGATGCTGACCTTGTGTTACTGAGCACTATGAA 50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000052209.9 ENSMUST00000109392.9 ENSMUST00000109394.3 ENSMUST00000109395.8 |
||
| CDS-3UTR GCA 90 bp | TTTGCCCGGAATCAATGGGAGAAATGCATCTTCTGCCCAGATGAACATTTTCTACCTCGTTCTCGAACTTaGTCCTCTGGTCCGGGACGA | + |
|
Preference number: 4 (lower is better) Translates to: FARNQWEKCIFCPDEHFLPRSRT*SSGPGR Trigger: TCGTCCCGGACCAGAGGAGCAAGTTCGAGAACGAGG...TAGAAAATGTTCATCTGGGCAGAAGATGCATTTCTCCCATTGATTCCGGGCAAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000052209.9 ENSMUST00000109392.9 ENSMUST00000109394.3 ENSMUST00000109395.8 |
||
| CDS-3UTR CCA 90 bp | TGCCTCCAGTTTAATATGCTGTTACATACAACAAGTTCCAGTATCCTTTTTCTGTCGCGGCAGGCGTTCTaGAAGCGTGTCTGGCGCTCC | + |
|
Preference number: 4 (lower is better) Translates to: CLQFNMLLHTTSSSILFLSRQAF*KRVWRS Trigger: GGAGCGCCAGACACGCTTCCAGAACGCCTGCCGCGA...CAGAAAAAGGATACTGGAACTTGTTGTATGTAACAGCATATTAAACTGGAGGCA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000052209.9 ENSMUST00000109392.9 ENSMUST00000109394.3 ENSMUST00000109395.8 |
||
| CDS-3UTR TCA 90 bp | GCAAATTCATTCATAGTGCTCAGTAACACAAGGTCAGCATCAGCTTCTGTAACACGCGGCTCAGCTTCCTaGAGAACTCCTCGTTCTCGA | + |
|
Preference number: 4 (lower is better) Translates to: ANSFIVLSNTRSASASVTRGSAS*RTPRSR Trigger: TCGAGAACGAGGAGTTCTTCAGGAAGCTGAGCCGCG...TGTTACAGAAGCTGATGCTGACCTTGTGTTACTGAGCACTATGAATGAATTTGC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000052209.9 ENSMUST00000109392.9 ENSMUST00000109394.3 ENSMUST00000109395.8 |
||
| CDS-3UTR GCA 90 bp | TACCGAAGAAAAGGAGTTTATGATCTTAACGCCAGCATTAAGACAGACAGAAGCCCTCGTTCTCGAACTTaGTCCTCTGGTCCGGGACGA | + |
|
Preference number: 4 (lower is better) Translates to: YRRKGVYDLNASIKTDRSPRSRT*SSGPGR Trigger: TCGTCCCGGACCAGAGGAGCAAGTTCGAGAACGAGG...GCTTCTGTCTGTCTTAATGCTGGCGTTAAGATCATAAACTCCTTTTCTTCGGTA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000052209.9 ENSMUST00000109392.9 ENSMUST00000109394.3 ENSMUST00000109395.8 |
||
| CDS-3UTR GCA 90 bp | ACAGTAAAGCTAACGGCAAAGCAATCTGGAAGCTTAAGGCAAGTTTTAATGGAGCCTCGTTCTCGAACTTaGTCCTCTGGTCCGGGACGA | + |
|
Preference number: 4 (lower is better) Translates to: TVKLTAKQSGSLRQVLMEPRSRT*SSGPGR Trigger: TCGTCCCGGACCAGAGGAGCAAGTTCGAGAACGAGG...CTCCATTAAAACTTGCCTTAAGCTTCCAGATTGCTTTGCCGTTAGCTTTACTGT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000052209.9 ENSMUST00000109392.9 ENSMUST00000109394.3 ENSMUST00000109395.8 |
||
| CDS-3UTR GCA 90 bp | TTTGCCCGGAATCAATGGGAGAAATGCATCTTCTGCCCAGATGAACATTTTCTACCAGGACTAGGGTCTTaGTGTCTTCTTGCCTGGGCT | + |
|
Preference number: 4 (lower is better) Translates to: FARNQWEKCIFCPDEHFLPGLGS*CLLAWA Trigger: AGCCCAGGCAAGAAGACAGCAAGACCCTAGTCCTGG...TAGAAAATGTTCATCTGGGCAGAAGATGCATTTCTCCCATTGATTCCGGGCAAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000109395.8 |
||
| CDS-3UTR CCA 90 bp | TGCAGGCATTATAGTGCAAAACCATGGCAGTGGGTGACGTCTTCACTGCCTCAGCTCCATTCAGAATCATaGGAGCCTTCAAGTATACCT | + |
|
Preference number: 4 (lower is better) Translates to: CRHYSAKPWQWVTSSLPQLHSES*EPSSIP Trigger: AGGTATACTTGAAGGCTCCCATGATTCTGAATGGAG...CTGAGGCAGTGAAGACGTCACCCACTGCCATGGTTTTGCACTATAATGCCTGCA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000052209.9 ENSMUST00000109392.9 ENSMUST00000109395.8 |
||
| CDS-3UTR TCA 90 bp | AATACCATCATCTATATCTGTGAATGTTTTGCCCGGAATCAATGGGAGAAATGCCGCGGCTCAGCTTCCTaGAGAACTCCTCGTTCTCGA | + |
|
Preference number: 4 (lower is better) Translates to: NTIIYICECFARNQWEKCRGSAS*RTPRSR Trigger: TCGAGAACGAGGAGTTCTTCAGGAAGCTGAGCCGCG...GCATTTCTCCCATTGATTCCGGGCAAAACATTCACAGATATAGATGATGGTATT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000052209.9 ENSMUST00000109392.9 ENSMUST00000109394.3 ENSMUST00000109395.8 |
||
| CDS-3UTR TCA 90 bp | ACATGTGAGCTGTACAACACCAAATACCAAGCAAATTCATTCATAGTGCTCAGTCGCGGCTCAGCTTCCTaGAGAACTCCTCGTTCTCGA | + |
|
Preference number: 4 (lower is better) Translates to: TCELYNTKYQANSFIVLSRGSAS*RTPRSR Trigger: TCGAGAACGAGGAGTTCTTCAGGAAGCTGAGCCGCG...ACTGAGCACTATGAATGAATTTGCTTGGTATTTGGTGTTGTACAGCTCACATGT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000052209.9 ENSMUST00000109392.9 ENSMUST00000109394.3 ENSMUST00000109395.8 |
||
| CDS-3UTR GCA 90 bp | TTCATAGTGCTCAGTAACACAAGGTCAGCATCAGCTTCTGTAACACATTATTGTCCTCGTTCTCGAACTTaGTCCTCTGGTCCGGGACGA | + |
|
Preference number: 4 (lower is better) Translates to: FIVLSNTRSASASVTHYCPRSRT*SSGPGR Trigger: TCGTCCCGGACCAGAGGAGCAAGTTCGAGAACGAGG...ACAATAATGTGTTACAGAAGCTGATGCTGACCTTGTGTTACTGAGCACTATGAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000052209.9 ENSMUST00000109392.9 ENSMUST00000109394.3 ENSMUST00000109395.8 |
||
| CDS-3UTR GCA 90 bp | ACATTTGCTATTTACAGAGGGACGGCCACATTAACACCATGTGATCTTACTGACGTCTTGCTGTCTTCTTaGCTCCATTTCCTCCCGGTG | + |
|
Preference number: 4 (lower is better) Translates to: TFAIYRGTATLTPCDLTDVLLSS*LHFLPV Trigger: CACCGGGAGGAAATGGAGGCAAGAAGACAGCAAGAC...GTCAGTAAGATCACATGGTGTTAATGTGGCCGTCCCTCTGTAAATAGCAAATGT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000052209.9 ENSMUST00000109394.3 |
||
| CDS-3UTR GCA 90 bp | GTTTTGCCCGGAATCAATGGGAGAAATGCATCTTCTGCCCAGATGAACATTTTCCCAGGACTAGGGTCTTaGTGTCTTCTTGCCTCCATT | + |
|
Preference number: 4 (lower is better) Translates to: VLPGINGRNASSAQMNIFPGLGS*CLLASI Trigger: AATGGAGGCAAGAAGACAGCAAGACCCTAGTCCTGG...GAAAATGTTCATCTGGGCAGAAGATGCATTTCTCCCATTGATTCCGGGCAAAAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000052209.9 ENSMUST00000109394.3 |
||
| CDS-3UTR GCA 90 bp | ACAGTAAAGCTAACGGCAAAGCAATCTGGAAGCTTAAGGCAAGTTTTAATGGAGGTCTTGCTGTCTTCTTaGCTGGGCTCGCTCCTCATC | + |
|
Preference number: 4 (lower is better) Translates to: TVKLTAKQSGSLRQVLMEVLLSS*LGSLLI Trigger: GATGAGGAGCGAGCCCAGGCAAGAAGACAGCAAGAC...CTCCATTAAAACTTGCCTTAAGCTTCCAGATTGCTTTGCCGTTAGCTTTACTGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000109395.8 |
||
| CDS-3UTR CCA 90 bp | GTGGCTTTAACAACTGTAAACGTTTGTTTTAGGAGGCTGTGGCAGACAGCTCTAAATGCATCTTCCTGCTaGGCTCGCTCCTCATCAAAC | + |
|
Preference number: 4 (lower is better) Translates to: VALTTVNVCFRRLWQTALNASSC*ARSSSN Trigger: GTTTGATGAGGAGCGAGCCCAGCAGGAAGATGCATT...TAGAGCTGTCTGCCACAGCCTCCTAAAACAAACGTTTACAGTTGTTAAAGCCAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000052209.9 ENSMUST00000109392.9 ENSMUST00000109394.3 |
||
| CDS-3UTR TCA 90 bp | TGCCTCCAGTTTAATATGCTGTTACATACAACAAGTTCCAGTATCCTTTTTCTGCGCGGCTCAGCTTCCTaGAGAACTCCTCGTTCTCGA | + |
|
Preference number: 4 (lower is better) Translates to: CLQFNMLLHTTSSSILFLRGSAS*RTPRSR Trigger: TCGAGAACGAGGAGTTCTTCAGGAAGCTGAGCCGCG...CAGAAAAAGGATACTGGAACTTGTTGTATGTAACAGCATATTAAACTGGAGGCA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000052209.9 ENSMUST00000109392.9 ENSMUST00000109394.3 ENSMUST00000109395.8 |
||
| CDS-3UTR TCA 90 bp | ACATGTGAGCTGTACAACACCAAATACCAAGCAAATTCATTCATAGTGCTCAGTTCCATTTCCTCCCGGTaGGACCTGTCTCTATCCTCA | + |
|
Preference number: 4 (lower is better) Translates to: TCELYNTKYQANSFIVLSSISSR*DLSLSS Trigger: TGAGGATAGAGACAGGTCTCACCGGGAGGAAATGGA...ACTGAGCACTATGAATGAATTTGCTTGGTATTTGGTGTTGTACAGCTCACATGT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000052209.9 ENSMUST00000109392.9 ENSMUST00000109394.3 |
||
| CDS-3UTR GCA 90 bp | AATACCATCATCTATATCTGTGAATGTTTTGCCCGGAATCAATGGGAGAAATGCGTCTTGCTGTCTTCTTaGCTCCATTTCCTCCCGGTG | + |
|
Preference number: 4 (lower is better) Translates to: NTIIYICECFARNQWEKCVLLSS*LHFLPV Trigger: CACCGGGAGGAAATGGAGGCAAGAAGACAGCAAGAC...GCATTTCTCCCATTGATTCCGGGCAAAACATTCACAGATATAGATGATGGTATT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000052209.9 ENSMUST00000109394.3 |
||
| CDS-3UTR TCA 90 bp | TTCATAGTGCTCAGTAACACAAGGTCAGCATCAGCTTCTGTAACACATTATTGTTACTGCCAGCAGCTGTaGAACTCTCACCTCCATTTC | + |
|
Preference number: 4 (lower is better) Translates to: FIVLSNTRSASASVTHYCYCQQL*NSHLHF Trigger: GAAATGGAGGTGAGAGTTTCACAGCTGCTGGCAGTA...ACAATAATGTGTTACAGAAGCTGATGCTGACCTTGTGTTACTGAGCACTATGAA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000109392.9 |
||
| CDS-3UTR GCA 90 bp | ACATGTGAGCTGTACAACACCAAATACCAAGCAAATTCATTCATAGTGCTCAGTCCAGGACTAGGGTCTTaGTGTCTTCTTGCCTCCATT | + |
|
Preference number: 4 (lower is better) Translates to: TCELYNTKYQANSFIVLSPGLGS*CLLASI Trigger: AATGGAGGCAAGAAGACAGCAAGACCCTAGTCCTGG...ACTGAGCACTATGAATGAATTTGCTTGGTATTTGGTGTTGTACAGCTCACATGT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000052209.9 ENSMUST00000109394.3 |
||
| CDS-3UTR CCA 90 bp | TTTGCCCGGAATCAATGGGAGAAATGCATCTTCTGCCCAGATGAACATTTTCTAATACCATCCAATCTGTaGAGATCAATCCAGCCCTTC | + |
|
Preference number: 4 (lower is better) Translates to: FARNQWEKCIFCPDEHFLIPSNL*RSIQPF Trigger: GAAGGGCTGGATTGATCTCCACAGATTGGATGGTAT...TAGAAAATGTTCATCTGGGCAGAAGATGCATTTCTCCCATTGATTCCGGGCAAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000052209.9 ENSMUST00000109392.9 ENSMUST00000109394.3 ENSMUST00000109395.8 |
||
| CDS-3UTR CCA 90 bp | TTCATAGTGCTCAGTAACACAAGGTCAGCATCAGCTTCTGTAACACATTATTGTAATGCATCTTCCTGCTaGGCTCGCTCCTCATCAAAC | + |
|
Preference number: 4 (lower is better) Translates to: FIVLSNTRSASASVTHYCNASSC*ARSSSN Trigger: GTTTGATGAGGAGCGAGCCCAGCAGGAAGATGCATT...ACAATAATGTGTTACAGAAGCTGATGCTGACCTTGTGTTACTGAGCACTATGAA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000052209.9 ENSMUST00000109392.9 ENSMUST00000109394.3 |
||
| CDS-3UTR CCA 90 bp | TTTGCCCGGAATCAATGGGAGAAATGCATCTTCTGCCCAGATGAACATTTTCTACTCCATTCAGAATCATaGGAGCCTTCAAGTATACCT | + |
|
Preference number: 4 (lower is better) Translates to: FARNQWEKCIFCPDEHFLLHSES*EPSSIP Trigger: AGGTATACTTGAAGGCTCCCATGATTCTGAATGGAG...TAGAAAATGTTCATCTGGGCAGAAGATGCATTTCTCCCATTGATTCCGGGCAAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000052209.9 ENSMUST00000109392.9 ENSMUST00000109395.8 |
||
| CDS-3UTR CCA 90 bp | GCAAATTCATTCATAGTGCTCAGTAACACAAGGTCAGCATCAGCTTCTGTAACAATACCATCCAATCTGTaGAGATCAATCCAGCCCTTC | + |
|
Preference number: 4 (lower is better) Translates to: ANSFIVLSNTRSASASVTIPSNL*RSIQPF Trigger: GAAGGGCTGGATTGATCTCCACAGATTGGATGGTAT...TGTTACAGAAGCTGATGCTGACCTTGTGTTACTGAGCACTATGAATGAATTTGC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000052209.9 ENSMUST00000109392.9 ENSMUST00000109394.3 ENSMUST00000109395.8 |
||
| CDS-3UTR CCA 90 bp | AAGGAGTTTATGATCTTAACGCCAGCATTAAGACAGACAGAAGCAGTGCAGAACCTCCATTCAGAATCATaGGAGCCTTCAAGTATACGA | + |
|
Preference number: 4 (lower is better) Translates to: KEFMILTPALRQTEAVQNLHSES*EPSSIR Trigger: TCGTATACTTGAAGGCTCCCATGATTCTGAATGGAG...GTTCTGCACTGCTTCTGTCTGTCTTAATGCTGGCGTTAAGATCATAAACTCCTT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000109394.3 |
||
| CDS-3UTR GCA 90 bp | ACAGTAAAGCTAACGGCAAAGCAATCTGGAAGCTTAAGGCAAGTTTTAATGGAGCCTTCAAGTATACCTTaGCTGCTTCTCTCTCTAAGT | + |
|
Preference number: 4 (lower is better) Translates to: TVKLTAKQSGSLRQVLMEPSSIP*LLLSLS Trigger: ACTTAGAGAGAGAAGCAGGCAAGGTATACTTGAAGG...CTCCATTAAAACTTGCCTTAAGCTTCCAGATTGCTTTGCCGTTAGCTTTACTGT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000052209.9 ENSMUST00000109392.9 ENSMUST00000109395.8 |
||
| CDS-3UTR CCA 90 bp | AATACCATCATCTATATCTGTGAATGTTTTGCCCGGAATCAATGGGAGAAATGCATACCATCCAATCTGTaGAGATCAATCCAGCCCTTC | + |
|
Preference number: 4 (lower is better) Translates to: NTIIYICECFARNQWEKCIPSNL*RSIQPF Trigger: GAAGGGCTGGATTGATCTCCACAGATTGGATGGTAT...GCATTTCTCCCATTGATTCCGGGCAAAACATTCACAGATATAGATGATGGTATT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000052209.9 ENSMUST00000109392.9 ENSMUST00000109394.3 ENSMUST00000109395.8 |
||
| CDS-3UTR CCA 90 bp | TTCATAGTGCTCAGTAACACAAGGTCAGCATCAGCTTCTGTAACACATTATTGTATACCATCCAATCTGTaGAGATCAATCCAGCCCTTC | + |
|
Preference number: 4 (lower is better) Translates to: FIVLSNTRSASASVTHYCIPSNL*RSIQPF Trigger: GAAGGGCTGGATTGATCTCCACAGATTGGATGGTAT...ACAATAATGTGTTACAGAAGCTGATGCTGACCTTGTGTTACTGAGCACTATGAA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000052209.9 ENSMUST00000109392.9 ENSMUST00000109394.3 ENSMUST00000109395.8 |
||
| CDS-3UTR CCA 90 bp | TTCATAGTGCTCAGTAACACAAGGTCAGCATCAGCTTCTGTAACACATTATTGTCTCCATTCAGAATCATaGGAGCCTTCAAGTATACCT | + |
|
Preference number: 4 (lower is better) Translates to: FIVLSNTRSASASVTHYCLHSES*EPSSIP Trigger: AGGTATACTTGAAGGCTCCCATGATTCTGAATGGAG...ACAATAATGTGTTACAGAAGCTGATGCTGACCTTGTGTTACTGAGCACTATGAA 40% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000052209.9 ENSMUST00000109392.9 ENSMUST00000109395.8 |
||
| 3UTR CAA 72 bp | TTTTGTAAAATACCATCATCTATATCTGTGAATGTTTaGCCCGGAATCAATGGGAGAAATGCATCTTCTGCC | + |
|
Preference number: 4 (lower is better) Translates to: FCKIPSSISVNV*PGINGRNASSA Trigger: GGCAGAAGATGCATTTCTCCCATTGATTCCGGGCAAAACATTCACAGATATAGATGATGGTATTTTACAAAA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000052209.9 ENSMUST00000109392.9 ENSMUST00000109394.3 ENSMUST00000109395.8 |
||
| CDS CCA 90 bp | CGACCGTCGCGGCAGGCGTTCTGGAAGCGTGTCTGGCGCTCCTCGTaGGGCCGGTCCCTGAAGCCCGTGTACTTAATCTCGCACTCGCGG | + |
|
Preference number: 5 (lower is better) Translates to: RPSRQAFWKRVWRSS*GRSLKPVYLISHSR Trigger: CCGCGAGTGCGAGATTAAGTACACGGGCTTCAGGGACCGGCCCCACGAGGAGCGCCAGACACGCTTCCAGAACGCCTGCCGCGACGGTCG 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000052209.9 ENSMUST00000109392.9 ENSMUST00000109394.3 ENSMUST00000109395.8 |
||
| CDS CCA 90 bp | GTAGCCACAAAAGCGATCTCCGAGCGACCGTCGCGGCAGGCGTTCTaGAAGCGTGTCTGGCGCTCCTCGTGGGGCCGGTCCCTGAAGCCC | + |
|
Preference number: 5 (lower is better) Translates to: VATKAISERPSRQAF*KRVWRSSWGRSLKP Trigger: GGGCTTCAGGGACCGGCCCCACGAGGAGCGCCAGACACGCTTCCAGAACGCCTGCCGCGACGGTCGCTCGGAGATCGCTTTTGTGGCTAC 68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000052209.9 ENSMUST00000109392.9 ENSMUST00000109395.8 |
||
| CDS CCA 90 bp | GCGATCTCCGAGCGACCGTCGCGGCAGGCGTTCTGGAAGCGTGTCTaGCGCTCCTCGTGGGGCCGGTCCCTGAAGCCCGTGTACTTAATC | + |
|
Preference number: 5 (lower is better) Translates to: AISERPSRQAFWKRV*RSSWGRSLKPVYLI Trigger: GATTAAGTACACGGGCTTCAGGGACCGGCCCCACGAGGAGCGCCAGACACGCTTCCAGAACGCCTGCCGCGACGGTCGCTCGGAGATCGC 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000052209.9 ENSMUST00000109392.9 ENSMUST00000109395.8 |
||
| CDS CCA 90 bp | GCCTTCAAGTATACGATCTCCGAGCGACCGTCGCGGCAGGCGTTCTaGAAGCGTGTCTGGCGCTCCTCGTGGGGCCGGTCCCTGAAGCCC | + |
|
Preference number: 5 (lower is better) Translates to: AFKYTISERPSRQAF*KRVWRSSWGRSLKP Trigger: GGGCTTCAGGGACCGGCCCCACGAGGAGCGCCAGACACGCTTCCAGAACGCCTGCCGCGACGGTCGCTCGGAGATCGTATACTTGAAGGC 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000109394.3 |
||
| CDS CCA 90 bp | ACGATCTCCGAGCGACCGTCGCGGCAGGCGTTCTGGAAGCGTGTCTaGCGCTCCTCGTGGGGCCGGTCCCTGAAGCCCGTGTACTTAATC | + |
|
Preference number: 5 (lower is better) Translates to: TISERPSRQAFWKRV*RSSWGRSLKPVYLI Trigger: GATTAAGTACACGGGCTTCAGGGACCGGCCCCACGAGGAGCGCCAGACACGCTTCCAGAACGCCTGCCGCGACGGTCGCTCGGAGATCGT 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000109394.3 |
||
| CDS-3UTR CAA 90 bp | CCAGTCTGTGGCTTCTTTGGGCATTTCTGTAGAGCATTCTCACCTGTGAAGAGCTTCCCGGCTAGGTGTTaGTCGCTGTTCTCCCTGCCA | + |
|
Preference number: 5 (lower is better) Translates to: PVCGFFGHFCRAFSPVKSFPARC*SLFSLP Trigger: TGGCAGGGAGAACAGCGACAAACACCTAGCCGGGAA...GCTCTTCACAGGTGAGAATGCTCTACAGAAATGCCCAAAGAAGCCACAGACTGG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000052209.9 ENSMUST00000109392.9 ENSMUST00000109395.8 |
||
| CDS TCA 90 bp | GTTACTGCCAGCAGCTGTGAAACTCTCACCTCCATTTCCTCCCGGTaGGACCTGTCTCTATCCTCAAATTCTCGAGTTCTTCTTCGAGCC | + |
|
Preference number: 5 (lower is better) Translates to: VTASSCETLTSISSR*DLSLSSNSRVLLRA Trigger: GGCTCGAAGAAGAACTCGAGAATTTGAGGATAGAGACAGGTCTCACCGGGAGGAAATGGAGGTGAGAGTTTCACAGCTGCTGGCAGTAAC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000109392.9 |
||
| CDS-3UTR CAA 90 bp | ACATTTGCTATTTACAGAGGGACGGCCACATTAACACCATGTGATCTTACTGACTCCTCGTTCTCGAACTaGCTCCTCTGGTCCGGGACG | + |
|
Preference number: 5 (lower is better) Translates to: TFAIYRGTATLTPCDLTDSSFSN*LLWSGT Trigger: CGTCCCGGACCAGAGGAGCAAGTTCGAGAACGAGGA...GTCAGTAAGATCACATGGTGTTAATGTGGCCGTCCCTCTGTAAATAGCAAATGT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000052209.9 ENSMUST00000109392.9 ENSMUST00000109394.3 ENSMUST00000109395.8 |
||
| CDS-3UTR CAA 90 bp | GTGGCTTTAACAACTGTAAACGTTTGTTTTAGGAGGCTGTGGCAGACAGCTCTATTCCCGGCTAGGTGTTaGTCGCTGTTCTCCCTGCCA | + |
|
Preference number: 5 (lower is better) Translates to: VALTTVNVCFRRLWQTALFPARC*SLFSLP Trigger: TGGCAGGGAGAACAGCGACAAACACCTAGCCGGGAA...TAGAGCTGTCTGCCACAGCCTCCTAAAACAAACGTTTACAGTTGTTAAAGCCAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000052209.9 ENSMUST00000109392.9 ENSMUST00000109395.8 |
||
| CDS CCA 90 bp | GCTCGCTCCTCATCAAACTCCAGGCAACCCATACCATCCAATCTGTaGAGATCAATCCAGCCCTTCCATATAACACACACTCCATTCAGA | + |
|
Preference number: 5 (lower is better) Translates to: ARSSSNSRQPIPSNL*RSIQPFHITHTPFR Trigger: TCTGAATGGAGTGTGTGTTATATGGAAGGGCTGGATTGATCTCCACAGATTGGATGGTATGGGTTGCCTGGAGTTTGATGAGGAGCGAGC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000052209.9 ENSMUST00000109392.9 ENSMUST00000109394.3 ENSMUST00000109395.8 |
||
| CDS-3UTR CAA 90 bp | TGCAGGCATTATAGTGCAAAACCATGGCAGTGGGTGACGTCTTCACTGCCTCAGAACTGGAGAGACAGATaGGTTCCTGTAGCCACAAAA | + |
|
Preference number: 5 (lower is better) Translates to: CRHYSAKPWQWVTSSLPQNWRDR*VPVATK Trigger: TTTTGTGGCTACAGGAACCAATCTGTCTCTCCAGTT...CTGAGGCAGTGAAGACGTCACCCACTGCCATGGTTTTGCACTATAATGCCTGCA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000052209.9 ENSMUST00000109392.9 ENSMUST00000109395.8 |
||
| CDS-3UTR CAA 90 bp | AATACCATCATCTATATCTGTGAATGTTTTGCCCGGAATCAATGGGAGAAATGCTCCTCGTTCTCGAACTaGCTCCTCTGGTCCGGGACG | + |
|
Preference number: 5 (lower is better) Translates to: NTIIYICECFARNQWEKCSSFSN*LLWSGT Trigger: CGTCCCGGACCAGAGGAGCAAGTTCGAGAACGAGGA...GCATTTCTCCCATTGATTCCGGGCAAAACATTCACAGATATAGATGATGGTATT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000052209.9 ENSMUST00000109392.9 ENSMUST00000109394.3 ENSMUST00000109395.8 |
||
| CDS-3UTR CAA 90 bp | TTCATAGTGCTCAGTAACACAAGGTCAGCATCAGCTTCTGTAACACATTATTGTTCCTCGTTCTCGAACTaGCTCCTCTGGTCCGGGACG | + |
|
Preference number: 5 (lower is better) Translates to: FIVLSNTRSASASVTHYCSSFSN*LLWSGT Trigger: CGTCCCGGACCAGAGGAGCAAGTTCGAGAACGAGGA...ACAATAATGTGTTACAGAAGCTGATGCTGACCTTGTGTTACTGAGCACTATGAA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000052209.9 ENSMUST00000109392.9 ENSMUST00000109394.3 ENSMUST00000109395.8 |
||
| CDS-3UTR CAA 90 bp | CTGTACAACACCAAATACCAAGCAAATTCATTCATAGTGCTCAGTAACACAAGGTCCTCGTTCTCGAACTaGCTCCTCTGGTCCGGGACG | + |
|
Preference number: 5 (lower is better) Translates to: LYNTKYQANSFIVLSNTRSSFSN*LLWSGT Trigger: CGTCCCGGACCAGAGGAGCAAGTTCGAGAACGAGGA...CCTTGTGTTACTGAGCACTATGAATGAATTTGCTTGGTATTTGGTGTTGTACAG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000052209.9 ENSMUST00000109392.9 ENSMUST00000109394.3 ENSMUST00000109395.8 |
||
| CDS-3UTR CAA 90 bp | AAGGAGTTTATGATCTTAACGCCAGCATTAAGACAGACAGAAGCAGTGCAGAACGGTCTTGCTGTCTTCTaGCCTCCATTTCCTCCCGGT | + |
|
Preference number: 5 (lower is better) Translates to: KEFMILTPALRQTEAVQNGLAVF*PPFPPG Trigger: ACCGGGAGGAAATGGAGGCAAGAAGACAGCAAGACC...GTTCTGCACTGCTTCTGTCTGTCTTAATGCTGGCGTTAAGATCATAAACTCCTT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000052209.9 ENSMUST00000109394.3 |
||
| CDS-3UTR CAA 90 bp | GTGGCTTTAACAACTGTAAACGTTTGTTTTAGGAGGCTGTGGCAGACAGCTCTAACCAGGACTAGGGTCTaGCTGTCTTCTTGCCTCCAT | + |
|
Preference number: 5 (lower is better) Translates to: VALTTVNVCFRRLWQTALTRTRV*LSSCLH Trigger: ATGGAGGCAAGAAGACAGCAAGACCCTAGTCCTGGT...TAGAGCTGTCTGCCACAGCCTCCTAAAACAAACGTTTACAGTTGTTAAAGCCAC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000052209.9 ENSMUST00000109394.3 |
||
| CDS-3UTR CAA 90 bp | ACATGTGAGCTGTACAACACCAAATACCAAGCAAATTCATTCATAGTGCTCAGTTTCCCGGCTAGGTGTTaGTCGCTGTTCTCCCTGCCA | + |
|
Preference number: 5 (lower is better) Translates to: TCELYNTKYQANSFIVLSFPARC*SLFSLP Trigger: TGGCAGGGAGAACAGCGACAAACACCTAGCCGGGAA...ACTGAGCACTATGAATGAATTTGCTTGGTATTTGGTGTTGTACAGCTCACATGT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000052209.9 ENSMUST00000109392.9 ENSMUST00000109395.8 |
||
| CDS-3UTR CAA 90 bp | ACATTTGCTATTTACAGAGGGACGGCCACATTAACACCATGTGATCTTACTGACACCAGGACTAGGGTCTaGCTGTCTTCTTGCCTCCAT | + |
|
Preference number: 5 (lower is better) Translates to: TFAIYRGTATLTPCDLTDTRTRV*LSSCLH Trigger: ATGGAGGCAAGAAGACAGCAAGACCCTAGTCCTGGT...GTCAGTAAGATCACATGGTGTTAATGTGGCCGTCCCTCTGTAAATAGCAAATGT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000052209.9 ENSMUST00000109394.3 |
||
| CDS-3UTR CAA 90 bp | TTCATAGTGCTCAGTAACACAAGGTCAGCATCAGCTTCTGTAACACATTATTGTACCAGGACTAGGGTCTaGCTGTCTTCTTGCCTGGGC | + |
|
Preference number: 5 (lower is better) Translates to: FIVLSNTRSASASVTHYCTRTRV*LSSCLG Trigger: GCCCAGGCAAGAAGACAGCAAGACCCTAGTCCTGGT...ACAATAATGTGTTACAGAAGCTGATGCTGACCTTGTGTTACTGAGCACTATGAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000109395.8 |
||
| CDS-3UTR CAA 90 bp | ACATGTGAGCTGTACAACACCAAATACCAAGCAAATTCATTCATAGTGCTCAGTGGTCTTGCTGTCTTCTaGCCTCCATTTCCTCCCGGT | + |
|
Preference number: 5 (lower is better) Translates to: TCELYNTKYQANSFIVLSGLAVF*PPFPPG Trigger: ACCGGGAGGAAATGGAGGCAAGAAGACAGCAAGACC...ACTGAGCACTATGAATGAATTTGCTTGGTATTTGGTGTTGTACAGCTCACATGT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000052209.9 ENSMUST00000109394.3 |
||
| CDS-3UTR CAA 90 bp | ACATTTGCTATTTACAGAGGGACGGCCACATTAACACCATGTGATCTTACTGACGCCTTCAAGTATACCTaGCCTGCTTCTCTCTCTAAG | + |
|
Preference number: 5 (lower is better) Translates to: TFAIYRGTATLTPCDLTDAFKYT*PASLSK Trigger: CTTAGAGAGAGAAGCAGGCAAGGTATACTTGAAGGC...GTCAGTAAGATCACATGGTGTTAATGTGGCCGTCCCTCTGTAAATAGCAAATGT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000052209.9 ENSMUST00000109392.9 ENSMUST00000109395.8 |
||
| CDS-3UTR CAA 90 bp | ACAGTAAAGCTAACGGCAAAGCAATCTGGAAGCTTAAGGCAAGTTTTAATGGAGGCCTTCAAGTATACCTaGCCTGCTTCTCTCTCTAAG | + |
|
Preference number: 5 (lower is better) Translates to: TVKLTAKQSGSLRQVLMEAFKYT*PASLSK Trigger: CTTAGAGAGAGAAGCAGGCAAGGTATACTTGAAGGC...CTCCATTAAAACTTGCCTTAAGCTTCCAGATTGCTTTGCCGTTAGCTTTACTGT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000052209.9 ENSMUST00000109392.9 ENSMUST00000109395.8 |
||
| CDS-3UTR CAA 90 bp | ATTAAGACAGACAGAAGCAGTGCAGAACCAGTAAGGAACATTTGCTATTTACAGGCCTTCAAGTATACCTaGCCTGCTTCTCTCTCTAAG | + |
|
Preference number: 5 (lower is better) Translates to: IKTDRSSAEPVRNICYLQAFKYT*PASLSK Trigger: CTTAGAGAGAGAAGCAGGCAAGGTATACTTGAAGGC...CTGTAAATAGCAAATGTTCCTTACTGGTTCTGCACTGCTTCTGTCTGTCTTAAT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000052209.9 ENSMUST00000109392.9 ENSMUST00000109395.8 |
||
| CDS GCA 72 bp | TCACCGCCACCTAAGTTAGAACCAGGACTAGGGTCTTaGTGTCTTCTTGCCTGGGCTCGCTCCTCATCAAAC | + |
|
Preference number: 6 (lower is better) Translates to: SPPPKLEPGLGS*CLLAWARSSSN Trigger: GTTTGATGAGGAGCGAGCCCAGGCAAGAAGACAGCAAGACCCTAGTCCTGGTTCTAACTTAGGTGGCGGTGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000109395.8 |
||
| CDS TCA 72 bp | AGCAGCTGTGAAACTCTCACCTCCATTTCCTCCCGGTaGGACCTGTCTCTATCCTCAAATTCTCGAGTTCTT | + |
|
Preference number: 6 (lower is better) Translates to: SSCETLTSISSR*DLSLSSNSRVL Trigger: AAGAACTCGAGAATTTGAGGATAGAGACAGGTCTCACCGGGAGGAAATGGAGGTGAGAGTTTCACAGCTGCT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000109392.9 |
||
| CDS CCA 72 bp | TCATCAAACTCCAGGCAACCCATACCATCCAATCTGTaGAGATCAATCCAGCCCTTCCATATAACACACACT | + |
|
Preference number: 6 (lower is better) Translates to: SSNSRQPIPSNL*RSIQPFHITHT Trigger: AGTGTGTGTTATATGGAAGGGCTGGATTGATCTCCACAGATTGGATGGTATGGGTTGCCTGGAGTTTGATGA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000052209.9 ENSMUST00000109392.9 ENSMUST00000109394.3 ENSMUST00000109395.8 |
||