Pregenerated sensors for CBARP (Mus musculus)
Ensembl gene IDs: ENSMUSG00000035640Ensembl transcript IDs: ENSMUST00000105369.8, ENSMUST00000123967.2, ENSMUST00000132523.8, ENSMUST00000147778.9, ENSMUST00000169546.9, ENSMUST00000170219.9
Found 390 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | CCTCAAAGCAGGTGGAGACTCCGGAGGGGGTGGGAAGGCGGGTGCTaGCCCTCCACCTCCGGAACCCGAGCCCGAGCTATCGCCGCTGCG | + |
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Preference number: 1 (lower is better) Translates to: PQSRWRLRRGWEGGC*PSTSGTRARAIAAA Trigger: CGCAGCGGCGATAGCTCGGGCTCGGGTTCCGGAGGTGGAGGGGCAGCACCCGCCTTCCCACCCCCTCCGGAGTCTCCACCTGCTTTGAGG 71% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000147778.9 |
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| 3UTR GCA 90 bp | AGGCCTCAAAGCAGGTGGAGACTCCGGAGGGGGTGGGAAGGCGGGTaGTGCCCCTCCACCTCCGGAACCCGAGCCCGAGCTATCGCCGCT | + |
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Preference number: 1 (lower is better) Translates to: RPQSRWRLRRGWEGG*CPSTSGTRARAIAA Trigger: AGCGGCGATAGCTCGGGCTCGGGTTCCGGAGGTGGAGGGGCAGCACCCGCCTTCCCACCCCCTCCGGAGTCTCCACCTGCTTTGAGGCCT 70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000147778.9 |
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| 3UTR GCA 90 bp | TGGCGCACGTGTAGGGCGGGCCACTCCAGGGGGCGTGGCTGCACGTaGACCACCGGGGTCGCTGTGCTGCCGTCCTCTCTGTTGCCATTG | + |
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Preference number: 1 (lower is better) Translates to: WRTCRAGHSRGRGCT*TTGVAVLPSSLLPL Trigger: CAATGGCAACAGAGAGGACGGCAGCACAGCGACCCCGGTGGTGCACGTGCAGCCACGCCCCCTGGAGTGGCCCGCCCTACACGTGCGCCA 70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000147778.9 |
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| 3UTR TCA 90 bp | GCTCTTGCTGCGGGTCCTGCTGCTGCGCATGCTCGGGCCCCAAACTaGTGCCATGCTCCGGAGGAGTCTCAGGGCTCGCTCCTCCCGCCG | + |
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Preference number: 1 (lower is better) Translates to: ALAAGPAAAHARAPN*CHAPEESQGSLLPP Trigger: CGGCGGGAGGAGCGAGCCCTGAGACTCCTCCGGAGCATGGCATCAGTTTGGGGCCCGAGCATGCGCAGCAGCAGGACCCGCAGCAAGAGC 69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000147778.9 |
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| 3UTR TCA 90 bp | CCCTCCACCTCCGGAACCCGAGCCCGAGCTATCGCCGCTGCGCACTaGGTCGCGGTCATTGCCGCTGCTGCTGTGGTCCGATGCAGTGGC | + |
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Preference number: 1 (lower is better) Translates to: PSTSGTRARAIAAAH*VAVIAAAAVVRCSG Trigger: GCCACTGCATCGGACCACAGCAGCAGCGGCAATGACCGCGACTCAGTGCGCAGCGGCGATAGCTCGGGCTCGGGTTCCGGAGGTGGAGGG 69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000147778.9 |
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| 3UTR GCA 90 bp | GTGCTGCCCCTCCACCTCCGGAACCCGAGCCCGAGCTATCGCCGCTaGGCACTGAGTCGCGGTCATTGCCGCTGCTGCTGTGGTCCGATG | + |
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Preference number: 1 (lower is better) Translates to: VLPLHLRNPSPSYRR*ALSRGHCRCCCGPM Trigger: CATCGGACCACAGCAGCAGCGGCAATGACCGCGACTCAGTGCGCAGCGGCGATAGCTCGGGCTCGGGTTCCGGAGGTGGAGGGGCAGCAC 69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000147778.9 |
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| 3UTR GCA 90 bp | GCATGCTCGGCGTCCTGCTCTTGCTGCGGGTCCTGCTGCTGCGCATaGTCGGGCCCCAAACTGATGCCATGCTCCGGAGGAGTCTCAGGG | + |
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Preference number: 1 (lower is better) Translates to: ACSASCSCCGSCCCA*SGPKLMPCSGGVSG Trigger: CCCTGAGACTCCTCCGGAGCATGGCATCAGTTTGGGGCCCGAGCATGCGCAGCAGCAGGACCCGCAGCAAGAGCAGGACGCCGAGCATGC 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000147778.9 |
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| 3UTR GCA 90 bp | CACTGTGCATGCTCGGCGTCCTGCTCTTGCTGCGGGTCCTGCTGCTaGGCATGCTCGGGCCCCAAACTGATGCCATGCTCCGGAGGAGTC | + |
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Preference number: 1 (lower is better) Translates to: HCACSASCSCCGSCC*ACSGPKLMPCSGGV Trigger: GACTCCTCCGGAGCATGGCATCAGTTTGGGGCCCGAGCATGCGCAGCAGCAGGACCCGCAGCAAGAGCAGGACGCCGAGCATGCACAGTG 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000147778.9 |
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| 3UTR GCA 90 bp | CTGCACTGTGCATGCTCGGCGTCCTGCTCTTGCTGCGGGTCCTGCTaGTGCGCATGCTCGGGCCCCAAACTGATGCCATGCTCCGGAGGA | + |
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Preference number: 1 (lower is better) Translates to: LHCACSASCSCCGSC*CACSGPKLMPCSGG Trigger: TCCTCCGGAGCATGGCATCAGTTTGGGGCCCGAGCATGCGCAGCAGCAGGACCCGCAGCAAGAGCAGGACGCCGAGCATGCACAGTGCAG 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000147778.9 |
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| 3UTR GCA 90 bp | CCGAGCTATCGCCGCTGCGCACTGAGTCGCGGTCATTGCCGCTGCTaGTGTGGTCCGATGCAGTGGCTGCATGGAGCTCGAGCGAAGCAC | + |
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Preference number: 1 (lower is better) Translates to: PSYRRCALSRGHCRC*CGPMQWLHGARAKH Trigger: GTGCTTCGCTCGAGCTCCATGCAGCCACTGCATCGGACCACAGCAGCAGCGGCAATGACCGCGACTCAGTGCGCAGCGGCGATAGCTCGG 66% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000147778.9 |
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| 3UTR GCA 90 bp | AGCCCGAGCTATCGCCGCTGCGCACTGAGTCGCGGTCATTGCCGCTaGTGCTGTGGTCCGATGCAGTGGCTGCATGGAGCTCGAGCGAAG | + |
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Preference number: 1 (lower is better) Translates to: SPSYRRCALSRGHCR*CCGPMQWLHGARAK Trigger: CTTCGCTCGAGCTCCATGCAGCCACTGCATCGGACCACAGCAGCAGCGGCAATGACCGCGACTCAGTGCGCAGCGGCGATAGCTCGGGCT 66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000147778.9 |
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| 3UTR GCA 90 bp | AACCCGAGCCCGAGCTATCGCCGCTGCGCACTGAGTCGCGGTCATTaGCGCTGCTGCTGTGGTCCGATGCAGTGGCTGCATGGAGCTCGA | + |
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Preference number: 1 (lower is better) Translates to: NPSPSYRRCALSRGH*RCCCGPMQWLHGAR Trigger: TCGAGCTCCATGCAGCCACTGCATCGGACCACAGCAGCAGCGGCAATGACCGCGACTCAGTGCGCAGCGGCGATAGCTCGGGCTCGGGTT 66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000147778.9 |
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| 3UTR GCA 90 bp | CATGGCGCAGGAACTCATGGAAAAGAGCGTCCGTCTTCTCGTCGATaGTGTAATCGCGGCGCGGCCTGCGTGGCCAGGCTCGCGGGCTGC | + |
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Preference number: 1 (lower is better) Translates to: HGAGTHGKERPSSRR*CNRGAACVARLAGC Trigger: GCAGCCCGCGAGCCTGGCCACGCAGGCCGCGCCGCGATTACAGCATCGACGAGAAGACGGACGCTCTTTTCCATGAGTTCCTGCGCCATG 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000147778.9 |
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| 3UTR TCA 90 bp | CCTTGTCCTGAGCCTTGCGGCTCTGTTCAAACAGGGCAGCCTCGTTaGAGGACACGCGGCGGCCGGTGGAGCTGGTGGCTAGGAAGCGCT | + |
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Preference number: 1 (lower is better) Translates to: PCPEPCGSVQTGQPR*RTRGGRWSWWLGSA Trigger: AGCGCTTCCTAGCCACCAGCTCCACCGGCCGCCGCGTGTCCTTCAACGAGGCTGCCCTGTTTGAACAGAGCCGCAAGGCTCAGGACAAGG 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000132523.8 ENSMUST00000147778.9 |
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| 3UTR CCA 90 bp | GGAGAGTCCAGTCTCGTCATCCTCCCTGCAGTTGAGCCTGGGTCCTaGAGCCTCTTGCTTCCGGAGGCCACTGCGCTAAGTGCCCAGGGG | + |
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Preference number: 1 (lower is better) Translates to: GESSLVILPAVEPGS*SLLLPEATALSAQG Trigger: CCCCTGGGCACTTAGCGCAGTGGCCTCCGGAAGCAAGAGGCTCCAGGACCCAGGCTCAACTGCAGGGAGGATGACGAGACTGGACTCTCC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000105369.8 ENSMUST00000147778.9 ENSMUST00000169546.9 ENSMUST00000170219.9 |
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| 3UTR CCA 90 bp | CTATCGCCGCTGCGCACTGAGTCGCGGTCATTGCCGCTGCTGCTGTaGTCCGATGCAGTGGCTGCATGGAGCTCGAGCGAAGCACGAAGG | + |
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Preference number: 1 (lower is better) Translates to: LSPLRTESRSLPLLL*SDAVAAWSSSEARR Trigger: CCTTCGTGCTTCGCTCGAGCTCCATGCAGCCACTGCATCGGACCACAGCAGCAGCGGCAATGACCGCGACTCAGTGCGCAGCGGCGATAG 64% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000147778.9 |
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| 3UTR CCA 90 bp | ACCACCGCCTCCACCGCCAGGCTCCTCCTCGATGACAGGAATGGATaGGTCATCACCCGTGATGGGCAGCGCACGGCCTTCAGGAGGACA | + |
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Preference number: 1 (lower is better) Translates to: TTASTARLLLDDRNG*VITRDGQRTAFRRT Trigger: TGTCCTCCTGAAGGCCGTGCGCTGCCCATCACGGGTGATGACCCATCCATTCCTGTCATCGAGGAGGAGCCTGGCGGTGGAGGCGGTGGT 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000147778.9 |
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| 3UTR TCA 90 bp | ACGTCCCCCTCCTGCTCCATGCTCTCACTGGCTGCCCGCTGCCGCTaGAAGTGGTGCCTCTTAGGGGAACCTCTCGTGTCCAGACTGGAC | + |
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Preference number: 1 (lower is better) Translates to: TSPSCSMLSLAARCR*KWCLLGEPLVSRLD Trigger: GTCCAGTCTGGACACGAGAGGTTCCCCTAAGAGGCACCACTTTCAGCGGCAGCGGGCAGCCAGTGAGAGCATGGAGCAGGAGGGGGACGT 63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000147778.9 |
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| 3UTR GCA 90 bp | GAGCAGGAAGTTCTGAAACTTCGTCGCCTGCTCCGCGCCCCTCGATaGTCGCATAGCCACTGTCCATCTGTAGCAGGCGGCGGGCTTCGC | + |
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Preference number: 1 (lower is better) Translates to: EQEVLKLRRLLRAPR*SHSHCPSVAGGGLR Trigger: GCGAAGCCCGCCGCCTGCTACAGATGGACAGTGGCTATGCGAGCATCGAGGGGCGCGGAGCAGGCGACGAAGTTTCAGAACTTCCTGCTC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000147778.9 |
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| 3UTR CCA 90 bp | GCACTGAGTCGCGGTCATTGCCGCTGCTGCTGTGGTCCGATGCAGTaGCTGCATGGAGCTCGAGCGAAGCACGAAGGCTCCACAGGTCAC | + |
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Preference number: 1 (lower is better) Translates to: ALSRGHCRCCCGPMQ*LHGARAKHEGSTGH Trigger: GTGACCTGTGGAGCCTTCGTGCTTCGCTCGAGCTCCATGCAGCCACTGCATCGGACCACAGCAGCAGCGGCAATGACCGCGACTCAGTGC 63% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000147778.9 |
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| 3UTR CCA 90 bp | CAACTGGCTCAGCAAGACGGGGAGAGAAGAGTCTCTCGTCGAGGCTaGCTGCTAGCTTGTCTAGCAGGGCCCCGGCGGGCTCAACGCACA | + |
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Preference number: 1 (lower is better) Translates to: QLAQQDGERRVSRRG*LLACLAGPRRAQRT Trigger: TGTGCGTTGAGCCCGCCGGGGCCCTGCTAGACAAGCTAGCAGCCAGCCTCGACGAGAGACTCTTCTCTCCCCGTCTTGCTGAGCCAGTTG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000147778.9 |
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| 3UTR TCA 90 bp | CTGTTCTGTCCGTTGTGTCCAAAGCCCAAGGCTCTCGGGGAGGAATaGGACGGGGAGCCTGTGCACATGCAGAGAGCAGGCGCGGTCGGT | + |
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Preference number: 1 (lower is better) Translates to: LFCPLCPKPKALGEE*DGEPVHMQRAGAVG Trigger: ACCGACCGCGCCTGCTCTCTGCATGTGCACAGGCTCCCCGTCTCATTCCTCCCCGAGAGCCTTGGGCTTTGGACACAACGGACAGAACAG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000105369.8 ENSMUST00000147778.9 ENSMUST00000169546.9 ENSMUST00000170219.9 |
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| 3UTR TCA 90 bp | TTGAGGGGCGGTAGGTGGAGGTGGGTGAGGCGGGCATTCTTGAGGTaGTGGAAATCCCCTTCTGTCAGGGTGTACCGGCGGCCCTTGTCC | + |
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Preference number: 1 (lower is better) Translates to: LRGGRWRWVRRAFLR*WKSPSVRVYRRPLS Trigger: GGACAAGGGCCGCCGGTACACCCTGACAGAAGGGGATTTCCATCACCTCAAGAATGCCCGCCTCACCCACCTCCACCTACCGCCCCTCAA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000123967.2 ENSMUST00000147778.9 |
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| 3UTR GCA 90 bp | GCCTGGGTCCTGGAGCCTCTTGCTTCCGGAGGCCACTGCGCTAAGTaGCCAGGGGACACTATATGTGCACACTTGGGATTTGGGGGCCGT | + |
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Preference number: 1 (lower is better) Translates to: AWVLEPLASGGHCAK*PGDTICAHLGFGGR Trigger: ACGGCCCCCAAATCCCAAGTGTGCACATATAGTGTCCCCTGGGCACTTAGCGCAGTGGCCTCCGGAAGCAAGAGGCTCCAGGACCCAGGC 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000105369.8 ENSMUST00000147778.9 ENSMUST00000169546.9 ENSMUST00000170219.9 |
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| 3UTR GCA 90 bp | GGTTGCTCCCGCTGTTGCCACCATTCCCACAGCAGCCCCATGTGCTaGCGGAGAAGCAGCAGAGAGGCAGGTCCAGTACAGAGCTTAGGC | + |
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Preference number: 1 (lower is better) Translates to: GCSRCCHHSHSSPMC*RRSSREAGPVQSLG Trigger: GCCTAAGCTCTGTACTGGACCTGCCTCTCTGCTGCTTCTCCGGCAGCACATGGGGCTGCTGTGGGAATGGTGGCAACAGCGGGAGCAACC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000147778.9 |
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| 3UTR TCA 90 bp | CCATATATGGACCGGAGAGTCCAGTCTCGTCATCCTCCCTGCAGTTaGGCCTGGGTCCTGGAGCCTCTTGCTTCCGGAGGCCACTGCGCT | + |
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Preference number: 1 (lower is better) Translates to: PYMDRRVQSRHPPCS*AWVLEPLASGGHCA Trigger: AGCGCAGTGGCCTCCGGAAGCAAGAGGCTCCAGGACCCAGGCTCAACTGCAGGGAGGATGACGAGACTGGACTCTCCGGTCCATATATGG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000105369.8 ENSMUST00000147778.9 ENSMUST00000169546.9 ENSMUST00000170219.9 |
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| 3UTR TCA 90 bp | CAGGCAGTGTTACTGCCTGCCAGTGCTCACGAGTGGAGGGTCAGCTaGTCCTGGAGGGAGGCTGCACATGCACCTCAGAACCTGCTCCAC | + |
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Preference number: 1 (lower is better) Translates to: QAVLLPASAHEWRVS*SWREAAHAPQNLLH Trigger: GTGGAGCAGGTTCTGAGGTGCATGTGCAGCCTCCCTCCAGGATCAGCTGACCCTCCACTCGTGAGCACTGGCAGGCAGTAACACTGCCTG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000105369.8 ENSMUST00000147778.9 ENSMUST00000169546.9 ENSMUST00000170219.9 |
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| 3UTR GCA 90 bp | TGCCAGTGCTCACGAGTGGAGGGTCAGCTGATCCTGGAGGGAGGCTaGACATGCACCTCAGAACCTGCTCCACCAGCATCTGTGGCCAGA | + |
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Preference number: 1 (lower is better) Translates to: CQCSRVEGQLILEGG*TCTSEPAPPASVAR Trigger: TCTGGCCACAGATGCTGGTGGAGCAGGTTCTGAGGTGCATGTGCAGCCTCCCTCCAGGATCAGCTGACCCTCCACTCGTGAGCACTGGCA 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000105369.8 ENSMUST00000147778.9 ENSMUST00000169546.9 ENSMUST00000170219.9 |
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| 3UTR GCA 90 bp | ACCTCCAGTAGGTTCGCTCACACAGTGGCAGGCAGTGTTACTGCCTaGCAGTGCTCACGAGTGGAGGGTCAGCTGATCCTGGAGGGAGGC | + |
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Preference number: 1 (lower is better) Translates to: TSSRFAHTVAGSVTA*QCSRVEGQLILEGG Trigger: GCCTCCCTCCAGGATCAGCTGACCCTCCACTCGTGAGCACTGGCAGGCAGTAACACTGCCTGCCACTGTGTGAGCGAACCTACTGGAGGT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000105369.8 ENSMUST00000147778.9 ENSMUST00000169546.9 ENSMUST00000170219.9 |
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| 3UTR CCA 90 bp | GAGGCCACTGCGCTAAGTGCCCAGGGGACACTATATGTGCACACTTaGGATTTGGGGGCCGTGTACCCATGCACGGCCACCTCAGGTTGC | + |
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Preference number: 1 (lower is better) Translates to: EATALSAQGTLYVHT*DLGAVYPCTATSGC Trigger: GCAACCTGAGGTGGCCGTGCATGGGTACACGGCCCCCAAATCCCAAGTGTGCACATATAGTGTCCCCTGGGCACTTAGCGCAGTGGCCTC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000105369.8 ENSMUST00000147778.9 ENSMUST00000169546.9 ENSMUST00000170219.9 |
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| 3UTR GCA 90 bp | GGGACACTATATGTGCACACTTGGGATTTGGGGGCCGTGTACCCATaGACGGCCACCTCAGGTTGCTCCCGCTGTTGCCACCATTCCCAC | + |
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Preference number: 1 (lower is better) Translates to: GTLYVHTWDLGAVYP*TATSGCSRCCHHSH Trigger: GTGGGAATGGTGGCAACAGCGGGAGCAACCTGAGGTGGCCGTGCATGGGTACACGGCCCCCAAATCCCAAGTGTGCACATATAGTGTCCC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000105369.8 ENSMUST00000147778.9 ENSMUST00000169546.9 ENSMUST00000170219.9 |
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| 3UTR CCA 90 bp | AGGGAGGCTGCACATGCACCTCAGAACCTGCTCCACCAGCATCTGTaGCCAGAGGCTGGGTGCTGGGGTCAACCATATATGGACCGGAGA | + |
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Preference number: 1 (lower is better) Translates to: REAAHAPQNLLHQHL*PEAGCWGQPYMDRR Trigger: TCTCCGGTCCATATATGGTTGACCCCAGCACCCAGCCTCTGGCCACAGATGCTGGTGGAGCAGGTTCTGAGGTGCATGTGCAGCCTCCCT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000105369.8 ENSMUST00000147778.9 ENSMUST00000169546.9 ENSMUST00000170219.9 |
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| 3UTR CCA 90 bp | ACCAGCATCTGTGGCCAGAGGCTGGGTGCTGGGGTCAACCATATATaGACCGGAGAGTCCAGTCTCGTCATCCTCCCTGCAGTTGAGCCT | + |
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Preference number: 1 (lower is better) Translates to: TSICGQRLGAGVNHI*TGESSLVILPAVEP Trigger: AGGCTCAACTGCAGGGAGGATGACGAGACTGGACTCTCCGGTCCATATATGGTTGACCCCAGCACCCAGCCTCTGGCCACAGATGCTGGT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000105369.8 ENSMUST00000147778.9 ENSMUST00000169546.9 ENSMUST00000170219.9 |
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| 3UTR TCA 90 bp | CATCTAACGAAATGCCCTCCCCAGAGTCACTGGAGGTTGAGGGGCTaGTCTCTGAGAAGTCCACGGAGTTGTAGGGACCTCCTGGCAGGG | + |
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Preference number: 1 (lower is better) Translates to: HLTKCPPQSHWRLRG*SLRSPRSCRDLLAG Trigger: CCCTGCCAGGAGGTCCCTACAACTCCGTGGACTTCTCAGAGATCAGCCCCTCAACCTCCAGTGACTCTGGGGAGGGCATTTCGTTAGATG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000147778.9 |
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| 3UTR GCA 90 bp | GACGGGGAGCCTGTGCACATGCAGAGAGCAGGCGCGGTCGGTTATTaGTCAGAGAGGAAAGGTAGAGCGCATACCATGGACAGGGTAAAT | + |
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Preference number: 1 (lower is better) Translates to: DGEPVHMQRAGAVGY*SERKGRAHTMDRVN Trigger: ATTTACCCTGTCCATGGTATGCGCTCTACCTTTCCTCTCTGAGCAATAACCGACCGCGCCTGCTCTCTGCATGTGCACAGGCTCCCCGTC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000105369.8 ENSMUST00000147778.9 ENSMUST00000169546.9 ENSMUST00000170219.9 |
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| 3UTR GCA 90 bp | CTTCCGCGCATGAGTGTGAGGATGTGCACGTGTGCGGTGACGCGGTaGATCGTCAAAATGAGGGTCATGGCGCAGGAACTCATGGAAAAG | + |
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Preference number: 1 (lower is better) Translates to: LPRMSVRMCTCAVTR*IVKMRVMAQELMEK Trigger: CTTTTCCATGAGTTCCTGCGCCATGACCCTCATTTTGACGATGCACCGCGTCACCGCACACGTGCACATCCTCACACTCATGCGCGGAAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000147778.9 |
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| 3UTR GCA 90 bp | AATCAACTCAGAATATGGGGCGGCGAGCTCCTCTCTGATCCTCAGTaGCCCACAGTCACTTCACCTCCAGTAGGTTCGCTCACACAGTGG | + |
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Preference number: 1 (lower is better) Translates to: NQLRIWGGELLSDPQ*PTVTSPPVGSLTQW Trigger: CCACTGTGTGAGCGAACCTACTGGAGGTGAAGTGACTGTGGGGCACTGAGGATCAGAGAGGAGCTCGCCGCCCCATATTCTGAGTTGATT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000105369.8 ENSMUST00000147778.9 ENSMUST00000169546.9 ENSMUST00000170219.9 |
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| 3UTR CCA 90 bp | AAAGGTAGAGCGCATACCATGGACAGGGTAAATCAACTCAGAATATaGGGCGGCGAGCTCCTCTCTGATCCTCAGTGCCCCACAGTCACT | + |
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Preference number: 1 (lower is better) Translates to: KGRAHTMDRVNQLRI*GGELLSDPQCPTVT Trigger: AGTGACTGTGGGGCACTGAGGATCAGAGAGGAGCTCGCCGCCCCATATTCTGAGTTGATTTACCCTGTCCATGGTATGCGCTCTACCTTT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000105369.8 ENSMUST00000147778.9 ENSMUST00000169546.9 ENSMUST00000170219.9 |
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| 3UTR TCA 90 bp | GCGAGTCTGCCCTATCTTTTGGCAATAAATAAAGCTTGGGAAACTTaGAGCTGCCACCTGGGCTGTTCTGTCCGTTGTGTCCAAAGCCCA | + |
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Preference number: 1 (lower is better) Translates to: ASLPYLLAINKAWET*SCHLGCSVRCVQSP Trigger: TGGGCTTTGGACACAACGGACAGAACAGCCCAGGTGGCAGCTTCAAGTTTCCCAAGCTTTATTTATTGCCAAAAGATAGGGCAGACTCGC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000105369.8 ENSMUST00000147778.9 ENSMUST00000169546.9 ENSMUST00000170219.9 |
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| 3UTR-3UTR GCA 90 bp | GGTGGGAAGGCGGGTGCTGCCCCTCCACCTCCGGAACCCGAGCCCGAGCTATCGGAGACGGGGAGCCTGTaGACATGCAGAGAGCAGGCG | + |
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Preference number: 2 (lower is better) Translates to: GGKAGAAPPPPEPEPELSETGSL*TCREQA Trigger: CGCCTGCTCTCTGCATGTGCACAGGCTCCCCGTCTC...CGATAGCTCGGGCTCGGGTTCCGGAGGTGGAGGGGCAGCACCCGCCTTCCCACC 69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000147778.9 |
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| 3UTR CAA 90 bp | GAACCCGAGCCCGAGCTATCGCCGCTGCGCACTGAGTCGCGGTCATaGCCGCTGCTGCTGTGGTCCGATGCAGTGGCTGCATGGAGCTCG | + |
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Preference number: 2 (lower is better) Translates to: EPEPELSPLRTESRS*PLLLWSDAVAAWSS Trigger: CGAGCTCCATGCAGCCACTGCATCGGACCACAGCAGCAGCGGCAATGACCGCGACTCAGTGCGCAGCGGCGATAGCTCGGGCTCGGGTTC 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000147778.9 |
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| 3UTR-3UTR CCA 90 bp | GGCTCTCGGGGAGGAATGAGACGGGGAGCCTGTGCACATGCAGAGAGCAGGCGCCAGGCCCAGCAGCCTTaGCACCCCGGGTACCTGCAT | + |
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Preference number: 2 (lower is better) Translates to: GSRGGMRRGACAHAESRRQAQQP*HPGYLH Trigger: ATGCAGGTACCCGGGGTGCCAAGGCTGCTGGGCCTG...GCGCCTGCTCTCTGCATGTGCACAGGCTCCCCGTCTCATTCCTCCCCGAGAGCC 67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000147778.9 |
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| 3UTR-3UTR GCA 90 bp | GGCTCTCGGGGAGGAATGAGACGGGGAGCCTGTGCACATGCAGAGAGCAGGCGCGAGACGGGGAGCCTGTaGACATGCAGAGAGCAGGCG | + |
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Preference number: 2 (lower is better) Translates to: GSRGGMRRGACAHAESRRETGSL*TCREQA Trigger: CGCCTGCTCTCTGCATGTGCACAGGCTCCCCGTCTC...GCGCCTGCTCTCTGCATGTGCACAGGCTCCCCGTCTCATTCCTCCCCGAGAGCC 66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 4 transcripts: ENSMUST00000105369.8 ENSMUST00000147778.9 ENSMUST00000169546.9 ENSMUST00000170219.9 |
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| 3UTR-3UTR CCA 90 bp | GCCTGTGCCCATCTCCCCAGGCACTGTTTCAGGCCCAGCAGCCTTGGCACCCCGGTTGAGCCTGGGTCCTaGAGCCTCTTGCTTCCGGAG | + |
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Preference number: 2 (lower is better) Translates to: ACAHLPRHCFRPSSLGTPVEPGS*SLLLPE Trigger: CTCCGGAAGCAAGAGGCTCCAGGACCCAGGCTCAAC...CGGGGTGCCAAGGCTGCTGGGCCTGAAACAGTGCCTGGGGAGATGGGCACAGGC 66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000147778.9 |
||
| 3UTR CAA 90 bp | GGCTGCACGTGCACCACCGGGGTCGCTGTGCTGCCGTCCTCTCTGTaGCCATTGCTTCCGCGCATGAGTGTGAGGATGTGCACGTGTGCG | + |
|
Preference number: 2 (lower is better) Translates to: GCTCTTGVAVLPSSL*PLLPRMSVRMCTCA Trigger: CGCACACGTGCACATCCTCACACTCATGCGCGGAAGCAATGGCAACAGAGAGGACGGCAGCACAGCGACCCCGGTGGTGCACGTGCAGCC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000147778.9 |
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| 3UTR CAA 90 bp | GCAAGACGGGGAGAGAAGAGTCTCTCGTCGAGGCTGGCTGCTAGCTaGTCTAGCAGGGCCCCGGCGGGCTCAACGCACAACCCAGAGCCT | + |
|
Preference number: 2 (lower is better) Translates to: ARRGEKSLSSRLAAS*SSRAPAGSTHNPEP Trigger: AGGCTCTGGGTTGTGCGTTGAGCCCGCCGGGGCCCTGCTAGACAAGCTAGCAGCCAGCCTCGACGAGAGACTCTTCTCTCCCCGTCTTGC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000147778.9 |
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| 3UTR-3UTR TCA 90 bp | GAGTCGCGGTCATTGCCGCTGCTGCTGTGGTCCGATGCAGTGGCTGCATGGAGCCATCCTCCCTGCAGTTaGGCCTGGGTCCTGGAGCCT | + |
|
Preference number: 2 (lower is better) Translates to: ESRSLPLLLWSDAVAAWSHPPCS*AWVLEP Trigger: AGGCTCCAGGACCCAGGCTCAACTGCAGGGAGGATG...GCTCCATGCAGCCACTGCATCGGACCACAGCAGCAGCGGCAATGACCGCGACTC 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000147778.9 |
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| 3UTR-3UTR GCA 90 bp | AATGAAGTCGGCATGGGGGACGTCCCCCTCCTGCTCCATGCTCTCACTGGCTGCGCTTCCGGAGGCCACTaGGCTAAGTGCCCAGGGGAC | + |
|
Preference number: 2 (lower is better) Translates to: NEVGMGDVPLLLHALTGCASGGH*AKCPGD Trigger: GTCCCCTGGGCACTTAGCGCAGTGGCCTCCGGAAGC...GCAGCCAGTGAGAGCATGGAGCAGGAGGGGGACGTCCCCCATGCCGACTTCATT 64% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000147778.9 |
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| 3UTR-3UTR GCA 90 bp | GCACTGAGTCGCGGTCATTGCCGCTGCTGCTGTGGTCCGATGCAGTGGCTGCATGGGAGCCTGTGCACATaGAGAGAGCAGGCGCGGTCG | + |
|
Preference number: 2 (lower is better) Translates to: ALSRGHCRCCCGPMQWLHGSLCT*REQARS Trigger: CGACCGCGCCTGCTCTCTGCATGTGCACAGGCTCCC...ATGCAGCCACTGCATCGGACCACAGCAGCAGCGGCAATGACCGCGACTCAGTGC 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000147778.9 |
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| 3UTR-3UTR CCA 90 bp | GTGAGGGTTTTCCCAGGGGGCGGCGGCCCTTGTCCTGAGCCTTGCGGCTCTGTTGGCCGGTGGAGCTGGTaGCTAGGAAGCGCTCTGTTT | + |
|
Preference number: 2 (lower is better) Translates to: VRVFPGGGGPCPEPCGSVGRWSW*LGSALF Trigger: AAACAGAGCGCTTCCTAGCCACCAGCTCCACCGGCC...AACAGAGCCGCAAGGCTCAGGACAAGGGCCGCCGCCCCCTGGGAAAACCCTCAC 64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000132523.8 |
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| 3UTR-3UTR CCA 90 bp | AAAGAGCGTCCGTCTTCTCGTCGATGCTGTAATCGCGGCGCGGCCTGCGTGGCCTGGCTCCATCCAGGCTaGCATGTCGGCGTAGCCGAG | + |
|
Preference number: 2 (lower is better) Translates to: KERPSSRRCCNRGAACVAWLHPG*HVGVAE Trigger: CTCGGCTACGCCGACATGCCAGCCTGGATGGAGCCA...GGCCACGCAGGCCGCGCCGCGATTACAGCATCGACGAGAAGACGGACGCTCTTT 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000147778.9 |
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| 3UTR CAA 90 bp | CACTTGGGATTTGGGGGCCGTGTACCCATGCACGGCCACCTCAGGTaGCTCCCGCTGTTGCCACCATTCCCACAGCAGCCCCATGTGCTG | + |
|
Preference number: 2 (lower is better) Translates to: HLGFGGRVPMHGHLR*LPLLPPFPQQPHVL Trigger: CAGCACATGGGGCTGCTGTGGGAATGGTGGCAACAGCGGGAGCAACCTGAGGTGGCCGTGCATGGGTACACGGCCCCCAAATCCCAAGTG 63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000105369.8 ENSMUST00000147778.9 ENSMUST00000169546.9 ENSMUST00000170219.9 |
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| 3UTR CAA 90 bp | ACGTGCACCACCGGGGTCGCTGTGCTGCCGTCCTCTCTGTTGCCATaGCTTCCGCGCATGAGTGTGAGGATGTGCACGTGTGCGGTGACG | + |
|
Preference number: 2 (lower is better) Translates to: TCTTGVAVLPSSLLP*LPRMSVRMCTCAVT Trigger: CGTCACCGCACACGTGCACATCCTCACACTCATGCGCGGAAGCAATGGCAACAGAGAGGACGGCAGCACAGCGACCCCGGTGGTGCACGT 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000147778.9 |
||
| 3UTR-3UTR TCA 90 bp | GCTGATCCTGGAGGGAGGCTGCACATGCACCTCAGAACCTGCTCCACCAGCATCGGAGCTGGGGCCGACTaGGTGGCCGGTGAGGGTTTT | + |
|
Preference number: 2 (lower is better) Translates to: ADPGGRLHMHLRTCSTSIGAGAD*VAGEGF Trigger: AAAACCCTCACCGGCCACTCAGTCGGCCCCAGCTCC...GATGCTGGTGGAGCAGGTTCTGAGGTGCATGTGCAGCCTCCCTCCAGGATCAGC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000147778.9 |
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| 3UTR-3UTR TCA 90 bp | GGCCAGAGGCTGGGTGCTGGGGTCAACCATATATGGACCGGAGAGTCCAGTCTCCGGCGGCCCTTGTCCTaGGCCTTGCGGCTCTGTTCA | + |
|
Preference number: 2 (lower is better) Translates to: GQRLGAGVNHIWTGESSLRRPLS*ALRLCS Trigger: TGAACAGAGCCGCAAGGCTCAGGACAAGGGCCGCCG...GAGACTGGACTCTCCGGTCCATATATGGTTGACCCCAGCACCCAGCCTCTGGCC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000147778.9 |
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| 3UTR-3UTR GCA 90 bp | GGCCGTGTACCCATGCACGGCCACCTCAGGTTGCTCCCGCTGTTGCCACCATTCAGCAGCCCCATGTGCTaGCGGAGAAGCAGCAGAGAG | + |
|
Preference number: 2 (lower is better) Translates to: GRVPMHGHLRLLPLLPPFSSPMC*RRSSRE Trigger: CTCTCTGCTGCTTCTCCGGCAGCACATGGGGCTGCT...GAATGGTGGCAACAGCGGGAGCAACCTGAGGTGGCCGTGCATGGGTACACGGCC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000105369.8 ENSMUST00000147778.9 ENSMUST00000169546.9 ENSMUST00000170219.9 |
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| 3UTR-3UTR GCA 90 bp | CTCTCGGGGAGGAATGAGACGGGGAGCCTGTGCACATGCAGAGAGCAGGCGCGGGAGGGAGGCTGCACATaGACCTCAGAACCTGCTCCA | + |
|
Preference number: 2 (lower is better) Translates to: LSGRNETGSLCTCREQAREGGCT*TSEPAP Trigger: TGGAGCAGGTTCTGAGGTGCATGTGCAGCCTCCCTC...CCGCGCCTGCTCTCTGCATGTGCACAGGCTCCCCGTCTCATTCCTCCCCGAGAG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000105369.8 ENSMUST00000147778.9 ENSMUST00000169546.9 ENSMUST00000170219.9 |
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| 3UTR-3UTR GCA 90 bp | CACTCATGGATAGTAGCGATTTTGAGGGGCGGTAGGTGGAGGTGGGTGAGGCGGGTGGGGTGTGGCCGCTaGACTGGCCTCCCCCGAATC | + |
|
Preference number: 2 (lower is better) Translates to: HSWIVAILRGGRWRWVRRVGCGR*TGLPRI Trigger: GATTCGGGGGAGGCCAGTGCAGCGGCCACACCCCAC...CCGCCTCACCCACCTCCACCTACCGCCCCTCAAAATCGCTACTATCCATGAGTG 63% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 2 transcripts: ENSMUST00000123967.2 ENSMUST00000147778.9 |
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| 3UTR-3UTR TCA 90 bp | GGCCAGAGGCTGGGTGCTGGGGTCAACCATATATGGACCGGAGAGTCCAGTCTCCATCCTCCCTGCAGTTaGGCCTGGGTCCTGGAGCCT | + |
|
Preference number: 2 (lower is better) Translates to: GQRLGAGVNHIWTGESSLHPPCS*AWVLEP Trigger: AGGCTCCAGGACCCAGGCTCAACTGCAGGGAGGATG...GAGACTGGACTCTCCGGTCCATATATGGTTGACCCCAGCACCCAGCCTCTGGCC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000105369.8 ENSMUST00000147778.9 ENSMUST00000169546.9 ENSMUST00000170219.9 |
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| 3UTR-3UTR TCA 90 bp | ACGGGGAGCCTGTGCACATGCAGAGAGCAGGCGCGGTCGGTTATTGCTCAGAGACGGCGAGCTCCTCTCTaGTCCTCAGTGCCCCACAGT | + |
|
Preference number: 2 (lower is better) Translates to: TGSLCTCREQARSVIAQRRRAPL*SSVPHS Trigger: ACTGTGGGGCACTGAGGATCAGAGAGGAGCTCGCCG...TCTCTGAGCAATAACCGACCGCGCCTGCTCTCTGCATGTGCACAGGCTCCCCGT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000105369.8 ENSMUST00000147778.9 ENSMUST00000169546.9 ENSMUST00000170219.9 |
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| 3UTR-3UTR CCA 90 bp | GGCTCTCGGGGAGGAATGAGACGGGGAGCCTGTGCACATGCAGAGAGCAGGCGCCCAGAGGCTGGGTGCTaGGGTCAACCATATATGGAC | + |
|
Preference number: 2 (lower is better) Translates to: GSRGGMRRGACAHAESRRPEAGC*GQPYMD Trigger: GTCCATATATGGTTGACCCCAGCACCCAGCCTCTGG...GCGCCTGCTCTCTGCATGTGCACAGGCTCCCCGTCTCATTCCTCCCCGAGAGCC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000105369.8 ENSMUST00000147778.9 ENSMUST00000169546.9 ENSMUST00000170219.9 |
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| 3UTR-3UTR CCA 90 bp | GGCACTGTTTCAGGCCCAGCAGCCTTGGCACCCCGGGTACCTGCATCTAACGAACTCCACCAGCATCTGTaGCCAGAGGCTGGGTGCTGG | + |
|
Preference number: 2 (lower is better) Translates to: GTVSGPAALAPRVPASNELHQHL*PEAGCW Trigger: CCAGCACCCAGCCTCTGGCCACAGATGCTGGTGGAG...TTCGTTAGATGCAGGTACCCGGGGTGCCAAGGCTGCTGGGCCTGAAACAGTGCC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000147778.9 |
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| 3UTR CAA 90 bp | ACTGCGCTAAGTGCCCAGGGGACACTATATGTGCACACTTGGGATTaGGGGGCCGTGTACCCATGCACGGCCACCTCAGGTTGCTCCCGC | + |
|
Preference number: 2 (lower is better) Translates to: TALSAQGTLYVHTWD*GAVYPCTATSGCSR Trigger: GCGGGAGCAACCTGAGGTGGCCGTGCATGGGTACACGGCCCCCAAATCCCAAGTGTGCACATATAGTGTCCCCTGGGCACTTAGCGCAGT 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000105369.8 ENSMUST00000147778.9 ENSMUST00000169546.9 ENSMUST00000170219.9 |
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| 3UTR CAA 90 bp | GGAGGCCACTGCGCTAAGTGCCCAGGGGACACTATATGTGCACACTaGGGATTTGGGGGCCGTGTACCCATGCACGGCCACCTCAGGTTG | + |
|
Preference number: 2 (lower is better) Translates to: GGHCAKCPGDTICAH*GFGGRVPMHGHLRL Trigger: CAACCTGAGGTGGCCGTGCATGGGTACACGGCCCCCAAATCCCAAGTGTGCACATATAGTGTCCCCTGGGCACTTAGCGCAGTGGCCTCC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000105369.8 ENSMUST00000147778.9 ENSMUST00000169546.9 ENSMUST00000170219.9 |
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| 3UTR-3UTR GCA 90 bp | TCAGCTGATCCTGGAGGGAGGCTGCACATGCACCTCAGAACCTGCTCCACCAGCAGCAGCCCCATGTGCTaGCGGAGAAGCAGCAGAGAG | + |
|
Preference number: 2 (lower is better) Translates to: SADPGGRLHMHLRTCSTSSSPMC*RRSSRE Trigger: CTCTCTGCTGCTTCTCCGGCAGCACATGGGGCTGCT...GCTGGTGGAGCAGGTTCTGAGGTGCATGTGCAGCCTCCCTCCAGGATCAGCTGA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000105369.8 ENSMUST00000147778.9 ENSMUST00000169546.9 ENSMUST00000170219.9 |
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| 3UTR-3UTR GCA 90 bp | ACGGGGAGCCTGTGCACATGCAGAGAGCAGGCGCGGTCGGTTATTGCTCAGAGAAGCAGCCCCATGTGCTaGCGGAGAAGCAGCAGAGAG | + |
|
Preference number: 2 (lower is better) Translates to: TGSLCTCREQARSVIAQRSSPMC*RRSSRE Trigger: CTCTCTGCTGCTTCTCCGGCAGCACATGGGGCTGCT...TCTCTGAGCAATAACCGACCGCGCCTGCTCTCTGCATGTGCACAGGCTCCCCGT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000105369.8 ENSMUST00000147778.9 ENSMUST00000169546.9 ENSMUST00000170219.9 |
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| 3UTR-3UTR GCA 90 bp | CCTGTGCACATGCAGAGAGCAGGCGCGGTCGGTTATTGCTCAGAGAGGAAAGGTGCTTCCGGAGGCCACTaGGCTAAGTGCCCAGGGGAC | + |
|
Preference number: 2 (lower is better) Translates to: PVHMQRAGAVGYCSERKGASGGH*AKCPGD Trigger: GTCCCCTGGGCACTTAGCGCAGTGGCCTCCGGAAGC...ACCTTTCCTCTCTGAGCAATAACCGACCGCGCCTGCTCTCTGCATGTGCACAGG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000105369.8 ENSMUST00000147778.9 ENSMUST00000169546.9 ENSMUST00000170219.9 |
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| 3UTR-3UTR GCA 90 bp | CGGGGAGCCTGTGCACATGCAGAGAGCAGGCGCGGTCGGTTATTGCTCAGAGAGGAGGGAGGCTGCACATaGACCTCAGAACCTGCTCCA | + |
|
Preference number: 2 (lower is better) Translates to: RGACAHAESRRGRLLLREEGGCT*TSEPAP Trigger: TGGAGCAGGTTCTGAGGTGCATGTGCAGCCTCCCTC...CTCTCTGAGCAATAACCGACCGCGCCTGCTCTCTGCATGTGCACAGGCTCCCCG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000105369.8 ENSMUST00000147778.9 ENSMUST00000169546.9 ENSMUST00000170219.9 |
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| 3UTR-3UTR GCA 90 bp | CTTGAAGCTGCCACCTGGGCTGTTCTGTCCGTTGTGTCCAAAGCCCAAGGCTCTGGGAGCCTGTGCACATaGAGAGAGCAGGCGCGGTCG | + |
|
Preference number: 2 (lower is better) Translates to: LEAATWAVLSVVSKAQGSGSLCT*REQARS Trigger: CGACCGCGCCTGCTCTCTGCATGTGCACAGGCTCCC...AGAGCCTTGGGCTTTGGACACAACGGACAGAACAGCCCAGGTGGCAGCTTCAAG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000105369.8 ENSMUST00000147778.9 ENSMUST00000169546.9 ENSMUST00000170219.9 |
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| 3UTR-3UTR CCA 90 bp | GCAGGCGCGGTCGGTTATTGCTCAGAGAGGAAAGGTAGAGCGCATACCATGGACGAGGTGGTAGCTGGGTaGGGTGTGGCCGCTGCACTG | + |
|
Preference number: 2 (lower is better) Translates to: AGAVGYCSERKGRAHTMDEVVAG*GVAAAL Trigger: CAGTGCAGCGGCCACACCCCACCCAGCTACCACCTC...GTCCATGGTATGCGCTCTACCTTTCCTCTCTGAGCAATAACCGACCGCGCCTGC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000147778.9 |
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| 3UTR-3UTR CCA 90 bp | ATCCTGGAGGGAGGCTGCACATGCACCTCAGAACCTGCTCCACCAGCATCTGTGCTGGGGCCGACTGAGTaGCCGGTGAGGGTTTTCCCA | + |
|
Preference number: 2 (lower is better) Translates to: ILEGGCTCTSEPAPPASVLGPTE*PVRVFP Trigger: TGGGAAAACCCTCACCGGCCACTCAGTCGGCCCCAG...CACAGATGCTGGTGGAGCAGGTTCTGAGGTGCATGTGCAGCCTCCCTCCAGGAT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000147778.9 |
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| 3UTR CAA 90 bp | AGTCTCGTCATCCTCCCTGCAGTTGAGCCTGGGTCCTGGAGCCTCTaGCTTCCGGAGGCCACTGCGCTAAGTGCCCAGGGGACACTATAT | + |
|
Preference number: 2 (lower is better) Translates to: SLVILPAVEPGSWSL*LPEATALSAQGTLY Trigger: ATATAGTGTCCCCTGGGCACTTAGCGCAGTGGCCTCCGGAAGCAAGAGGCTCCAGGACCCAGGCTCAACTGCAGGGAGGATGACGAGACT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000105369.8 ENSMUST00000147778.9 ENSMUST00000169546.9 ENSMUST00000170219.9 |
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| 3UTR CAA 90 bp | GCTGCACTGGCCTCCCCCGAATCACACTCATGGATAGTAGCGATTTaGAGGGGCGGTAGGTGGAGGTGGGTGAGGCGGGCATTCTTGAGG | + |
|
Preference number: 2 (lower is better) Translates to: AALASPESHSWIVAI*RGGRWRWVRRAFLR Trigger: CCTCAAGAATGCCCGCCTCACCCACCTCCACCTACCGCCCCTCAAAATCGCTACTATCCATGAGTGTGATTCGGGGGAGGCCAGTGCAGC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000123967.2 ENSMUST00000147778.9 |
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| 3UTR-3UTR TCA 90 bp | CCTGTGCACATGCAGAGAGCAGGCGCGGTCGGTTATTGCTCAGAGAGGAAAGGTGAGTGGAGGGTCAGCTaGTCCTGGAGGGAGGCTGCA | + |
|
Preference number: 2 (lower is better) Translates to: PVHMQRAGAVGYCSERKGEWRVS*SWREAA Trigger: TGCAGCCTCCCTCCAGGATCAGCTGACCCTCCACTC...ACCTTTCCTCTCTGAGCAATAACCGACCGCGCCTGCTCTCTGCATGTGCACAGG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000105369.8 ENSMUST00000147778.9 ENSMUST00000169546.9 ENSMUST00000170219.9 |
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| 3UTR-3UTR GCA 90 bp | ATCCTGGAGGGAGGCTGCACATGCACCTCAGAACCTGCTCCACCAGCATCTGTGAGCAGCCCCATGTGCTaGCGGAGAAGCAGCAGAGAG | + |
|
Preference number: 2 (lower is better) Translates to: ILEGGCTCTSEPAPPASVSSPMC*RRSSRE Trigger: CTCTCTGCTGCTTCTCCGGCAGCACATGGGGCTGCT...CACAGATGCTGGTGGAGCAGGTTCTGAGGTGCATGTGCAGCCTCCCTCCAGGAT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000105369.8 ENSMUST00000147778.9 ENSMUST00000169546.9 ENSMUST00000170219.9 |
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| 3UTR-3UTR GCA 90 bp | GGAAACTTGAAGCTGCCACCTGGGCTGTTCTGTCCGTTGTGTCCAAAGCCCAAGGGGAGCCTGTGCACATaGAGAGAGCAGGCGCGGTCG | + |
|
Preference number: 2 (lower is better) Translates to: GNLKLPPGLFCPLCPKPKGSLCT*REQARS Trigger: CGACCGCGCCTGCTCTCTGCATGTGCACAGGCTCCC...CTTGGGCTTTGGACACAACGGACAGAACAGCCCAGGTGGCAGCTTCAAGTTTCC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000105369.8 ENSMUST00000147778.9 ENSMUST00000169546.9 ENSMUST00000170219.9 |
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| 3UTR-3UTR CCA 90 bp | TCAGCTGATCCTGGAGGGAGGCTGCACATGCACCTCAGAACCTGCTCCACCAGCTCTGTGGCCAGAGGCTaGGTGCTGGGGTCAACCATA | + |
|
Preference number: 2 (lower is better) Translates to: SADPGGRLHMHLRTCSTSSVARG*VLGSTI Trigger: TATGGTTGACCCCAGCACCCAGCCTCTGGCCACAGA...GCTGGTGGAGCAGGTTCTGAGGTGCATGTGCAGCCTCCCTCCAGGATCAGCTGA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000105369.8 ENSMUST00000147778.9 ENSMUST00000169546.9 ENSMUST00000170219.9 |
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| 3UTR-3UTR CCA 90 bp | GCAGGCGCGGTCGGTTATTGCTCAGAGAGGAAAGGTAGAGCGCATACCATGGACCTCCACCAGCATCTGTaGCCAGAGGCTGGGTGCTGG | + |
|
Preference number: 2 (lower is better) Translates to: AGAVGYCSERKGRAHTMDLHQHL*PEAGCW Trigger: CCAGCACCCAGCCTCTGGCCACAGATGCTGGTGGAG...GTCCATGGTATGCGCTCTACCTTTCCTCTCTGAGCAATAACCGACCGCGCCTGC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000105369.8 ENSMUST00000147778.9 ENSMUST00000169546.9 ENSMUST00000170219.9 |
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| 3UTR-3UTR CCA 90 bp | GAAATGCCCTCCCCAGAGTCACTGGAGGTTGAGGGGCTGATCTCTGAGAAGTCCCTGGGGCCGACTGAGTaGCCGGTGAGGGTTTTCCCA | + |
|
Preference number: 2 (lower is better) Translates to: EMPSPESLEVEGLISEKSLGPTE*PVRVFP Trigger: TGGGAAAACCCTCACCGGCCACTCAGTCGGCCCCAG...GGACTTCTCAGAGATCAGCCCCTCAACCTCCAGTGACTCTGGGGAGGGCATTTC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 2 transcripts: ENSMUST00000132523.8 ENSMUST00000147778.9 |
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| 3UTR-3UTR TCA 90 bp | AACTTGAAGCTGCCACCTGGGCTGTTCTGTCCGTTGTGTCCAAAGCCCAAGGCTCATCCTCCCTGCAGTTaGGCCTGGGTCCTGGAGCCT | + |
|
Preference number: 2 (lower is better) Translates to: NLKLPPGLFCPLCPKPKAHPPCS*AWVLEP Trigger: AGGCTCCAGGACCCAGGCTCAACTGCAGGGAGGATG...AGCCTTGGGCTTTGGACACAACGGACAGAACAGCCCAGGTGGCAGCTTCAAGTT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000105369.8 ENSMUST00000147778.9 ENSMUST00000169546.9 ENSMUST00000170219.9 |
||
| 3UTR-3UTR TCA 90 bp | TGCAGAGAGCAGGCGCGGTCGGTTATTGCTCAGAGAGGAAAGGTAGAGCGCATACATCCTCCCTGCAGTTaGGCCTGGGTCCTGGAGCCT | + |
|
Preference number: 2 (lower is better) Translates to: CREQARSVIAQRGKVERIHPPCS*AWVLEP Trigger: AGGCTCCAGGACCCAGGCTCAACTGCAGGGAGGATG...TATGCGCTCTACCTTTCCTCTCTGAGCAATAACCGACCGCGCCTGCTCTCTGCA 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000105369.8 ENSMUST00000147778.9 ENSMUST00000169546.9 ENSMUST00000170219.9 |
||
| 3UTR-3UTR GCA 90 bp | TCAGCTGATCCTGGAGGGAGGCTGCACATGCACCTCAGAACCTGCTCCACCAGCCCTTGTCCTGAGCCTTaGGGCTCTGTTCAAACAGGG | + |
|
Preference number: 2 (lower is better) Translates to: SADPGGRLHMHLRTCSTSPCPEP*GSVQTG Trigger: CCCTGTTTGAACAGAGCCGCAAGGCTCAGGACAAGG...GCTGGTGGAGCAGGTTCTGAGGTGCATGTGCAGCCTCCCTCCAGGATCAGCTGA 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000147778.9 |
||
| 3UTR-3UTR CCA 90 bp | TCAGCTGATCCTGGAGGGAGGCTGCACATGCACCTCAGAACCTGCTCCACCAGCCCAGAGGCTGGGTGCTaGGGTCAACCATATATGGAC | + |
|
Preference number: 2 (lower is better) Translates to: SADPGGRLHMHLRTCSTSPEAGC*GQPYMD Trigger: GTCCATATATGGTTGACCCCAGCACCCAGCCTCTGG...GCTGGTGGAGCAGGTTCTGAGGTGCATGTGCAGCCTCCCTCCAGGATCAGCTGA 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000105369.8 ENSMUST00000147778.9 ENSMUST00000169546.9 ENSMUST00000170219.9 |
||
| 3UTR-3UTR CCA 90 bp | AACTTGAAGCTGCCACCTGGGCTGTTCTGTCCGTTGTGTCCAAAGCCCAAGGCTCTCCACCAGCATCTGTaGCCAGAGGCTGGGTGCTGG | + |
|
Preference number: 2 (lower is better) Translates to: NLKLPPGLFCPLCPKPKALHQHL*PEAGCW Trigger: CCAGCACCCAGCCTCTGGCCACAGATGCTGGTGGAG...AGCCTTGGGCTTTGGACACAACGGACAGAACAGCCCAGGTGGCAGCTTCAAGTT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000105369.8 ENSMUST00000147778.9 ENSMUST00000169546.9 ENSMUST00000170219.9 |
||
| 3UTR-3UTR CCA 90 bp | ACGGGGAGCCTGTGCACATGCAGAGAGCAGGCGCGGTCGGTTATTGCTCAGAGAGGTTCGCTCACACAGTaGCAGGCAGTGTTACTGCCT | + |
|
Preference number: 2 (lower is better) Translates to: TGSLCTCREQARSVIAQRGSLTQ*QAVLLP Trigger: AGGCAGTAACACTGCCTGCCACTGTGTGAGCGAACC...TCTCTGAGCAATAACCGACCGCGCCTGCTCTCTGCATGTGCACAGGCTCCCCGT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000105369.8 ENSMUST00000147778.9 ENSMUST00000169546.9 ENSMUST00000170219.9 |
||
| 3UTR-3UTR CCA 90 bp | AAGCACGAAGGCTCCACAGGTCACGGTAGCTGCACTGTGCATGCTCGGCGTCCTCTTGAAGCTGCCACCTaGGCTGTTCTGTCCGTTGTG | + |
|
Preference number: 2 (lower is better) Translates to: KHEGSTGHGSCTVHARRPLEAAT*AVLSVV Trigger: CACAACGGACAGAACAGCCCAGGTGGCAGCTTCAAG...AGGACGCCGAGCATGCACAGTGCAGCTACCGTGACCTGTGGAGCCTTCGTGCTT 59% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000147778.9 |
||
| 3UTR-3UTR CCA 90 bp | TGTGGCCGCTGCACTGGCCTCCCCCGAATCACACTCATGGATAGTAGCGATTTTGGCGGTAGGTGGAGGTaGGTGAGGCGGGCATTCTTG | + |
|
Preference number: 2 (lower is better) Translates to: CGRCTGLPRITLMDSSDFGGRWR*VRRAFL Trigger: CAAGAATGCCCGCCTCACCCACCTCCACCTACCGCC...AAAATCGCTACTATCCATGAGTGTGATTCGGGGGAGGCCAGTGCAGCGGCCACA 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000123967.2 ENSMUST00000147778.9 |
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| 3UTR-3UTR TCA 90 bp | GCCAGAGGCTGGGTGCTGGGGTCAACCATATATGGACCGGAGAGTCCAGTCTCGAAAGCTTGGGAAACTTaGAGCTGCCACCTGGGCTGT | + |
|
Preference number: 2 (lower is better) Translates to: ARGWVLGSTIYGPESPVSKAWET*SCHLGC Trigger: ACAGCCCAGGTGGCAGCTTCAAGTTTCCCAAGCTTT...CGAGACTGGACTCTCCGGTCCATATATGGTTGACCCCAGCACCCAGCCTCTGGC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000105369.8 ENSMUST00000147778.9 ENSMUST00000169546.9 ENSMUST00000170219.9 |
||
| 3UTR-3UTR TCA 90 bp | CCCATGTGCTGCCGGAGAAGCAGCAGAGAGGCAGGTCCAGTACAGAGCTTAGGCCGGGCATTCTTGAGGTaGTGGAAATCCCCTTCTGTC | + |
|
Preference number: 2 (lower is better) Translates to: PMCCRRSSREAGPVQSLGRAFLR*WKSPSV Trigger: GACAGAAGGGGATTTCCATCACCTCAAGAATGCCCG...GCCTAAGCTCTGTACTGGACCTGCCTCTCTGCTGCTTCTCCGGCAGCACATGGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000147778.9 |
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| 3UTR-3UTR GCA 90 bp | GGGAAACTTGAAGCTGCCACCTGGGCTGTTCTGTCCGTTGTGTCCAAAGCCCAACACAGCAGCCCCATGTaGTGCCGGAGAAGCAGCAGA | + |
|
Preference number: 2 (lower is better) Translates to: GKLEAATWAVLSVVSKAQHSSPM*CRRSSR Trigger: TCTGCTGCTTCTCCGGCAGCACATGGGGCTGCTGTG...TTGGGCTTTGGACACAACGGACAGAACAGCCCAGGTGGCAGCTTCAAGTTTCCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000105369.8 ENSMUST00000147778.9 ENSMUST00000169546.9 ENSMUST00000170219.9 |
||
| 3UTR-3UTR GCA 90 bp | CCAGAGGCTGGGTGCTGGGGTCAACCATATATGGACCGGAGAGTCCAGTCTCGTGGCCACTGCGCTAAGTaGCCAGGGGACACTATATGT | + |
|
Preference number: 2 (lower is better) Translates to: PEAGCWGQPYMDRRVQSRGHCAK*PGDTIC Trigger: ACATATAGTGTCCCCTGGGCACTTAGCGCAGTGGCC...ACGAGACTGGACTCTCCGGTCCATATATGGTTGACCCCAGCACCCAGCCTCTGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000105369.8 ENSMUST00000147778.9 ENSMUST00000169546.9 ENSMUST00000170219.9 |
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| 3UTR-3UTR GCA 90 bp | GGAGCCTGTGCACATGCAGAGAGCAGGCGCGGTCGGTTATTGCTCAGAGAGGAATGGCCAGAGGCTGGGTaGTGGGGTCAACCATATATG | + |
|
Preference number: 2 (lower is better) Translates to: GACAHAESRRGRLLLREEWPEAG*WGQPYM Trigger: CATATATGGTTGACCCCAGCACCCAGCCTCTGGCCA...TTCCTCTCTGAGCAATAACCGACCGCGCCTGCTCTCTGCATGTGCACAGGCTCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000105369.8 ENSMUST00000147778.9 ENSMUST00000169546.9 ENSMUST00000170219.9 |
||
| 3UTR-3UTR CCA 90 bp | TGCAGAGAGCAGGCGCGGTCGGTTATTGCTCAGAGAGGAAAGGTAGAGCGCATAGTTGAGCCTGGGTCCTaGAGCCTCTTGCTTCCGGAG | + |
|
Preference number: 2 (lower is better) Translates to: CREQARSVIAQRGKVERIVEPGS*SLLLPE Trigger: CTCCGGAAGCAAGAGGCTCCAGGACCCAGGCTCAAC...TATGCGCTCTACCTTTCCTCTCTGAGCAATAACCGACCGCGCCTGCTCTCTGCA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000105369.8 ENSMUST00000147778.9 ENSMUST00000169546.9 ENSMUST00000170219.9 |
||
| 3UTR-3UTR CCA 90 bp | TCAGCTGATCCTGGAGGGAGGCTGCACATGCACCTCAGAACCTGCTCCACCAGCGGGGTCAACCATATATaGACCGGAGAGTCCAGTCTC | + |
|
Preference number: 2 (lower is better) Translates to: SADPGGRLHMHLRTCSTSGVNHI*TGESSL Trigger: GAGACTGGACTCTCCGGTCCATATATGGTTGACCCC...GCTGGTGGAGCAGGTTCTGAGGTGCATGTGCAGCCTCCCTCCAGGATCAGCTGA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000105369.8 ENSMUST00000147778.9 ENSMUST00000169546.9 ENSMUST00000170219.9 |
||
| 3UTR-3UTR CCA 90 bp | GCCATTGCTTCCGCGCATGAGTGTGAGGATGTGCACGTGTGCGGTGACGCGGTGAATCAACTCAGAATATaGGGCGGCGAGCTCCTCTCT | + |
|
Preference number: 2 (lower is better) Translates to: AIASAHECEDVHVCGDAVNQLRI*GGELLS Trigger: AGAGAGGAGCTCGCCGCCCCATATTCTGAGTTGATT...CACCGCGTCACCGCACACGTGCACATCCTCACACTCATGCGCGGAAGCAATGGC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000147778.9 |
||
| 3UTR-3UTR CCA 90 bp | GGAAACTTGAAGCTGCCACCTGGGCTGTTCTGTCCGTTGTGTCCAAAGCCCAAGGGCCGGTGGAGCTGGTaGCTAGGAAGCGCTCTGTTT | + |
|
Preference number: 2 (lower is better) Translates to: GNLKLPPGLFCPLCPKPKGRWSW*LGSALF Trigger: AAACAGAGCGCTTCCTAGCCACCAGCTCCACCGGCC...CTTGGGCTTTGGACACAACGGACAGAACAGCCCAGGTGGCAGCTTCAAGTTTCC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000147778.9 |
||
| 3UTR-3UTR GCA 90 bp | TCAGCTGATCCTGGAGGGAGGCTGCACATGCACCTCAGAACCTGCTCCACCAGCAGGGGACACTATATGTaGACACTTGGGATTTGGGGG | + |
|
Preference number: 2 (lower is better) Translates to: SADPGGRLHMHLRTCSTSRGHYM*TLGIWG Trigger: CCCCCAAATCCCAAGTGTGCACATATAGTGTCCCCT...GCTGGTGGAGCAGGTTCTGAGGTGCATGTGCAGCCTCCCTCCAGGATCAGCTGA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000105369.8 ENSMUST00000147778.9 ENSMUST00000169546.9 ENSMUST00000170219.9 |
||
| 3UTR-3UTR GCA 90 bp | GCAGGCGCGGTCGGTTATTGCTCAGAGAGGAAAGGTAGAGCGCATACCATGGACGGCCACTGCGCTAAGTaGCCAGGGGACACTATATGT | + |
|
Preference number: 2 (lower is better) Translates to: AGAVGYCSERKGRAHTMDGHCAK*PGDTIC Trigger: ACATATAGTGTCCCCTGGGCACTTAGCGCAGTGGCC...GTCCATGGTATGCGCTCTACCTTTCCTCTCTGAGCAATAACCGACCGCGCCTGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000105369.8 ENSMUST00000147778.9 ENSMUST00000169546.9 ENSMUST00000170219.9 |
||
| 3UTR-3UTR GCA 90 bp | AACTTGAAGCTGCCACCTGGGCTGTTCTGTCCGTTGTGTCCAAAGCCCAAGGCTGAGGGAGGCTGCACATaGACCTCAGAACCTGCTCCA | + |
|
Preference number: 2 (lower is better) Translates to: NLKLPPGLFCPLCPKPKAEGGCT*TSEPAP Trigger: TGGAGCAGGTTCTGAGGTGCATGTGCAGCCTCCCTC...AGCCTTGGGCTTTGGACACAACGGACAGAACAGCCCAGGTGGCAGCTTCAAGTT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000105369.8 ENSMUST00000147778.9 ENSMUST00000169546.9 ENSMUST00000170219.9 |
||
| 3UTR-3UTR GCA 90 bp | CCTGTGCACATGCAGAGAGCAGGCGCGGTCGGTTATTGCTCAGAGAGGAAAGGTATCCTGGAGGGAGGCTaGACATGCACCTCAGAACCT | + |
|
Preference number: 2 (lower is better) Translates to: PVHMQRAGAVGYCSERKGILEGG*TCTSEP Trigger: AGGTTCTGAGGTGCATGTGCAGCCTCCCTCCAGGAT...ACCTTTCCTCTCTGAGCAATAACCGACCGCGCCTGCTCTCTGCATGTGCACAGG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000105369.8 ENSMUST00000147778.9 ENSMUST00000169546.9 ENSMUST00000170219.9 |
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| 3UTR-3UTR GCA 90 bp | TGCAGAGAGCAGGCGCGGTCGGTTATTGCTCAGAGAGGAAAGGTAGAGCGCATAGGCAGGCAGTGTTACTaGCTGCCAGTGCTCACGAGT | + |
|
Preference number: 2 (lower is better) Translates to: CREQARSVIAQRGKVERIGRQCY*LPVLTS Trigger: ACTCGTGAGCACTGGCAGGCAGTAACACTGCCTGCC...TATGCGCTCTACCTTTCCTCTCTGAGCAATAACCGACCGCGCCTGCTCTCTGCA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000105369.8 ENSMUST00000147778.9 ENSMUST00000169546.9 ENSMUST00000170219.9 |
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| 3UTR-3UTR CCA 90 bp | GATCCTGGAGGGAGGCTGCACATGCACCTCAGAACCTGCTCCACCAGCATCTGTGGGGTCAACCATATATaGACCGGAGAGTCCAGTCTC | + |
|
Preference number: 2 (lower is better) Translates to: DPGGRLHMHLRTCSTSICGVNHI*TGESSL Trigger: GAGACTGGACTCTCCGGTCCATATATGGTTGACCCC...ACAGATGCTGGTGGAGCAGGTTCTGAGGTGCATGTGCAGCCTCCCTCCAGGATC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000105369.8 ENSMUST00000147778.9 ENSMUST00000169546.9 ENSMUST00000170219.9 |
||
| 3UTR-3UTR CCA 90 bp | GCAGGCGCGGTCGGTTATTGCTCAGAGAGGAAAGGTAGAGCGCATACCATGGACGGTTCGCTCACACAGTaGCAGGCAGTGTTACTGCCT | + |
|
Preference number: 2 (lower is better) Translates to: AGAVGYCSERKGRAHTMDGSLTQ*QAVLLP Trigger: AGGCAGTAACACTGCCTGCCACTGTGTGAGCGAACC...GTCCATGGTATGCGCTCTACCTTTCCTCTCTGAGCAATAACCGACCGCGCCTGC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000105369.8 ENSMUST00000147778.9 ENSMUST00000169546.9 ENSMUST00000170219.9 |
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| 3UTR-3UTR TCA 90 bp | GTGGCCGCTGCACTGGCCTCCCCCGAATCACACTCATGGATAGTAGCGATTTTGCGGGCATTCTTGAGGTaGTGGAAATCCCCTTCTGTC | + |
|
Preference number: 2 (lower is better) Translates to: VAAALASPESHSWIVAILRAFLR*WKSPSV Trigger: GACAGAAGGGGATTTCCATCACCTCAAGAATGCCCG...CAAAATCGCTACTATCCATGAGTGTGATTCGGGGGAGGCCAGTGCAGCGGCCAC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000123967.2 ENSMUST00000147778.9 |
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| 3UTR-3UTR GCA 90 bp | GATCCTGGAGGGAGGCTGCACATGCACCTCAGAACCTGCTCCACCAGCATCTGTAGGGGACACTATATGTaGACACTTGGGATTTGGGGG | + |
|
Preference number: 2 (lower is better) Translates to: DPGGRLHMHLRTCSTSICRGHYM*TLGIWG Trigger: CCCCCAAATCCCAAGTGTGCACATATAGTGTCCCCT...ACAGATGCTGGTGGAGCAGGTTCTGAGGTGCATGTGCAGCCTCCCTCCAGGATC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000105369.8 ENSMUST00000147778.9 ENSMUST00000169546.9 ENSMUST00000170219.9 |
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| 3UTR-3UTR GCA 90 bp | CCAGAGGCTGGGTGCTGGGGTCAACCATATATGGACCGGAGAGTCCAGTCTCGTAGGGGACACTATATGTaGACACTTGGGATTTGGGGG | + |
|
Preference number: 2 (lower is better) Translates to: PEAGCWGQPYMDRRVQSRRGHYM*TLGIWG Trigger: CCCCCAAATCCCAAGTGTGCACATATAGTGTCCCCT...ACGAGACTGGACTCTCCGGTCCATATATGGTTGACCCCAGCACCCAGCCTCTGG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000105369.8 ENSMUST00000147778.9 ENSMUST00000169546.9 ENSMUST00000170219.9 |
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| 3UTR-3UTR GCA 90 bp | GGAAACTTGAAGCTGCCACCTGGGCTGTTCTGTCCGTTGTGTCCAAAGCCCAAGGGCCACTGCGCTAAGTaGCCAGGGGACACTATATGT | + |
|
Preference number: 2 (lower is better) Translates to: GNLKLPPGLFCPLCPKPKGHCAK*PGDTIC Trigger: ACATATAGTGTCCCCTGGGCACTTAGCGCAGTGGCC...CTTGGGCTTTGGACACAACGGACAGAACAGCCCAGGTGGCAGCTTCAAGTTTCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000105369.8 ENSMUST00000147778.9 ENSMUST00000169546.9 ENSMUST00000170219.9 |
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| 3UTR-3UTR GCA 90 bp | ACCATATATGGACCGGAGAGTCCAGTCTCGTCATCCTCCCTGCAGTTGAGCCTGGGCCACTGCGCTAAGTaGCCAGGGGACACTATATGT | + |
|
Preference number: 2 (lower is better) Translates to: TIYGPESPVSSSSLQLSLGHCAK*PGDTIC Trigger: ACATATAGTGTCCCCTGGGCACTTAGCGCAGTGGCC...CAGGCTCAACTGCAGGGAGGATGACGAGACTGGACTCTCCGGTCCATATATGGT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000105369.8 ENSMUST00000147778.9 ENSMUST00000169546.9 ENSMUST00000170219.9 |
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| 3UTR-3UTR GCA 90 bp | GATCCTCAGTGCCCCACAGTCACTTCACCTCCAGTAGGTTCGCTCACACAGTGGGGCGCGGTCGGTTATTaGTCAGAGAGGAAAGGTAGA | + |
|
Preference number: 2 (lower is better) Translates to: DPQCPTVTSPPVGSLTQWGAVGY*SERKGR Trigger: TCTACCTTTCCTCTCTGAGCAATAACCGACCGCGCC...CCACTGTGTGAGCGAACCTACTGGAGGTGAAGTGACTGTGGGGCACTGAGGATC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000105369.8 ENSMUST00000147778.9 ENSMUST00000169546.9 ENSMUST00000170219.9 |
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| 3UTR-3UTR TCA 90 bp | AGTGGGCAGGCACTCACAGCGAGTCTGCCCTATCTTTTGGCAATAAATAAAGCTCGGCGAGCTCCTCTCTaGTCCTCAGTGCCCCACAGT | + |
|
Preference number: 2 (lower is better) Translates to: SGQALTASLPYLLAINKARRAPL*SSVPHS Trigger: ACTGTGGGGCACTGAGGATCAGAGAGGAGCTCGCCG...AGCTTTATTTATTGCCAAAAGATAGGGCAGACTCGCTGTGAGTGCCTGCCCACT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000105369.8 ENSMUST00000147778.9 ENSMUST00000169546.9 ENSMUST00000170219.9 |
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| 3UTR-3UTR GCA 90 bp | GGTTATTGCTCAGAGAGGAAAGGTAGAGCGCATACCATGGACAGGGTAAATCAAGCTTCCGGAGGCCACTaGGCTAAGTGCCCAGGGGAC | + |
|
Preference number: 2 (lower is better) Translates to: GYCSERKGRAHTMDRVNQASGGH*AKCPGD Trigger: GTCCCCTGGGCACTTAGCGCAGTGGCCTCCGGAAGC...TTGATTTACCCTGTCCATGGTATGCGCTCTACCTTTCCTCTCTGAGCAATAACC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000105369.8 ENSMUST00000147778.9 ENSMUST00000169546.9 ENSMUST00000170219.9 |
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| 3UTR-3UTR GCA 90 bp | GGAAACTTGAAGCTGCCACCTGGGCTGTTCTGTCCGTTGTGTCCAAAGCCCAAGCTGCATCTAACGAAATaGCCTCCCCAGAGTCACTGG | + |
|
Preference number: 2 (lower is better) Translates to: GNLKLPPGLFCPLCPKPKLHLTK*PPQSHW Trigger: CCAGTGACTCTGGGGAGGGCATTTCGTTAGATGCAG...CTTGGGCTTTGGACACAACGGACAGAACAGCCCAGGTGGCAGCTTCAAGTTTCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000147778.9 |
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| 3UTR-3UTR CCA 90 bp | GGAAACTTGAAGCTGCCACCTGGGCTGTTCTGTCCGTTGTGTCCAAAGCCCAAGGGGGTCAACCATATATaGACCGGAGAGTCCAGTCTC | + |
|
Preference number: 2 (lower is better) Translates to: GNLKLPPGLFCPLCPKPKGVNHI*TGESSL Trigger: GAGACTGGACTCTCCGGTCCATATATGGTTGACCCC...CTTGGGCTTTGGACACAACGGACAGAACAGCCCAGGTGGCAGCTTCAAGTTTCC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000105369.8 ENSMUST00000147778.9 ENSMUST00000169546.9 ENSMUST00000170219.9 |
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| 3UTR-3UTR CCA 90 bp | TGCAGAGAGCAGGCGCGGTCGGTTATTGCTCAGAGAGGAAAGGTAGAGCGCATAAATCAACTCAGAATATaGGGCGGCGAGCTCCTCTCT | + |
|
Preference number: 2 (lower is better) Translates to: CREQARSVIAQRGKVERINQLRI*GGELLS Trigger: AGAGAGGAGCTCGCCGCCCCATATTCTGAGTTGATT...TATGCGCTCTACCTTTCCTCTCTGAGCAATAACCGACCGCGCCTGCTCTCTGCA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000105369.8 ENSMUST00000147778.9 ENSMUST00000169546.9 ENSMUST00000170219.9 |
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| 3UTR-3UTR CCA 90 bp | AGTGGGCAGGCACTCACAGCGAGTCTGCCCTATCTTTTGGCAATAAATAAAGCTCTTGAAGCTGCCACCTaGGCTGTTCTGTCCGTTGTG | + |
|
Preference number: 2 (lower is better) Translates to: SGQALTASLPYLLAINKALEAAT*AVLSVV Trigger: CACAACGGACAGAACAGCCCAGGTGGCAGCTTCAAG...AGCTTTATTTATTGCCAAAAGATAGGGCAGACTCGCTGTGAGTGCCTGCCCACT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000105369.8 ENSMUST00000147778.9 ENSMUST00000169546.9 ENSMUST00000170219.9 |
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| 3UTR-3UTR CCA 90 bp | AGTGGGCAGGCACTCACAGCGAGTCTGCCCTATCTTTTGGCAATAAATAAAGCTAATCAACTCAGAATATaGGGCGGCGAGCTCCTCTCT | + |
|
Preference number: 2 (lower is better) Translates to: SGQALTASLPYLLAINKANQLRI*GGELLS Trigger: AGAGAGGAGCTCGCCGCCCCATATTCTGAGTTGATT...AGCTTTATTTATTGCCAAAAGATAGGGCAGACTCGCTGTGAGTGCCTGCCCACT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000105369.8 ENSMUST00000147778.9 ENSMUST00000169546.9 ENSMUST00000170219.9 |
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| 3UTR-3UTR CCA 90 bp | AAACCCAGAGCAAACAAATATGCAGAGACATTTATGATTAACCAGACAACACGACCAGAGGCTGGGTGCTaGGGTCAACCATATATGGAC | + |
|
Preference number: 2 (lower is better) Translates to: KPRANKYAETFMINQTTRPEAGC*GQPYMD Trigger: GTCCATATATGGTTGACCCCAGCACCCAGCCTCTGG...TCGTGTTGTCTGGTTAATCATAAATGTCTCTGCATATTTGTTTGCTCTGGGTTT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000169546.9 ENSMUST00000170219.9 |
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| 3UTR GCA 72 bp | CGCACGTGTAGGGCGGGCCACTCCAGGGGGCGTGGCTaGACGTGCACCACCGGGGTCGCTGTGCTGCCGTCC | + |
|
Preference number: 3 (lower is better) Translates to: RTCRAGHSRGRG*TCTTGVAVLPS Trigger: GGACGGCAGCACAGCGACCCCGGTGGTGCACGTGCAGCCACGCCCCCTGGAGTGGCCCGCCCTACACGTGCG 75% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000147778.9 |
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| 3UTR CCA 72 bp | CAGGGCCCCGGCGGGCTCAACGCACAACCCAGAGCCTaGGCAACCACCGCCTCCACCGCCAGGCTCCTCCTC | + |
|
Preference number: 3 (lower is better) Translates to: QGPGGLNAQPRA*ATTASTARLLL Trigger: GAGGAGGAGCCTGGCGGTGGAGGCGGTGGTTGCCCAGGCTCTGGGTTGTGCGTTGAGCCCGCCGGGGCCCTG 74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000147778.9 |
||
| 3UTR GCA 72 bp | AGCAGGTGGAGACTCCGGAGGGGGTGGGAAGGCGGGTaGTGCCCCTCCACCTCCGGAACCCGAGCCCGAGCT | + |
|
Preference number: 3 (lower is better) Translates to: SRWRLRRGWEGG*CPSTSGTRARA Trigger: AGCTCGGGCTCGGGTTCCGGAGGTGGAGGGGCAGCACCCGCCTTCCCACCCCCTCCGGAGTCTCCACCTGCT 72% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000147778.9 |
||
| 3UTR GCA 72 bp | CCGTCTTCTCGTCGATGCTGTAATCGCGGCGCGGCCTaGGTGGCCAGGCTCGCGGGCTGCGGGGAGGACTGC | + |
|
Preference number: 3 (lower is better) Translates to: PSSRRCCNRGAA*VARLAGCGEDC Trigger: GCAGTCCTCCCCGCAGCCCGCGAGCCTGGCCACGCAGGCCGCGCCGCGATTACAGCATCGACGAGAAGACGG 72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000147778.9 |
||
| 3UTR GCA 72 bp | TGTAGGGCGGGCCACTCCAGGGGGCGTGGCTGCACGTaGACCACCGGGGTCGCTGTGCTGCCGTCCTCTCTG | + |
|
Preference number: 3 (lower is better) Translates to: CRAGHSRGRGCT*TTGVAVLPSSL Trigger: CAGAGAGGACGGCAGCACAGCGACCCCGGTGGTGCACGTGCAGCCACGCCCCCTGGAGTGGCCCGCCCTACA 72% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000147778.9 |
||
| 3UTR CCA 72 bp | GCGGCGGGCTTCGCCGTCCTTAGGCCTCAAAGCAGGTaGAGACTCCGGAGGGGGTGGGAAGGCGGGTGCTGC | + |
|
Preference number: 3 (lower is better) Translates to: AAGFAVLRPQSR*RLRRGWEGGCC Trigger: GCAGCACCCGCCTTCCCACCCCCTCCGGAGTCTCCACCTGCTTTGAGGCCTAAGGACGGCGAAGCCCGCCGC 71% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000147778.9 |
||
| 3UTR-3UTR CAA 90 bp | GGCTCTCGGGGAGGAATGAGACGGGGAGCCTGTGCACATGCAGAGAGCAGGCGCGGGTCCTGGAGCCTCTaGCTTCCGGAGGCCACTGCG | + |
|
Preference number: 3 (lower is better) Translates to: GSRGGMRRGACAHAESRRGSWSL*LPEATA Trigger: CGCAGTGGCCTCCGGAAGCAAGAGGCTCCAGGACCC...GCGCCTGCTCTCTGCATGTGCACAGGCTCCCCGTCTCATTCCTCCCCGAGAGCC 68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000105369.8 ENSMUST00000147778.9 ENSMUST00000169546.9 ENSMUST00000170219.9 |
||
| 3UTR TCA 72 bp | GCGGGTCCTGCTGCTGCGCATGCTCGGGCCCCAAACTaGTGCCATGCTCCGGAGGAGTCTCAGGGCTCGCTC | + |
|
Preference number: 3 (lower is better) Translates to: AGPAAAHARAPN*CHAPEESQGSL Trigger: GAGCGAGCCCTGAGACTCCTCCGGAGCATGGCATCAGTTTGGGGCCCGAGCATGCGCAGCAGCAGGACCCGC 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000147778.9 |
||
| 3UTR TCA 72 bp | TCCGGAACCCGAGCCCGAGCTATCGCCGCTGCGCACTaGGTCGCGGTCATTGCCGCTGCTGCTGTGGTCCGA | + |
|
Preference number: 3 (lower is better) Translates to: SGTRARAIAAAH*VAVIAAAAVVR Trigger: TCGGACCACAGCAGCAGCGGCAATGACCGCGACTCAGTGCGCAGCGGCGATAGCTCGGGCTCGGGTTCCGGA 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000147778.9 |
||
| 3UTR GCA 72 bp | TGCTGCTGCGCATGCTCGGGCCCCAAACTGATGCCATaGTCCGGAGGAGTCTCAGGGCTCGCTCCTCCCGCC | + |
|
Preference number: 3 (lower is better) Translates to: CCCACSGPKLMP*SGGVSGLAPPA Trigger: GGCGGGAGGAGCGAGCCCTGAGACTCCTCCGGAGCATGGCATCAGTTTGGGGCCCGAGCATGCGCAGCAGCA 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000147778.9 |
||
| 3UTR GCA 72 bp | CTCCACCTCCGGAACCCGAGCCCGAGCTATCGCCGCTaGGCACTGAGTCGCGGTCATTGCCGCTGCTGCTGT | + |
|
Preference number: 3 (lower is better) Translates to: LHLRNPSPSYRR*ALSRGHCRCCC Trigger: ACAGCAGCAGCGGCAATGACCGCGACTCAGTGCGCAGCGGCGATAGCTCGGGCTCGGGTTCCGGAGGTGGAG 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000147778.9 |
||
| 3UTR CCA 72 bp | CTTAGGCCTCAAAGCAGGTGGAGACTCCGGAGGGGGTaGGAAGGCGGGTGCTGCCCCTCCACCTCCGGAACC | + |
|
Preference number: 3 (lower is better) Translates to: LRPQSRWRLRRG*EGGCCPSTSGT Trigger: GGTTCCGGAGGTGGAGGGGCAGCACCCGCCTTCCCACCCCCTCCGGAGTCTCCACCTGCTTTGAGGCCTAAG 68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000147778.9 |
||
| 3UTR TCA 72 bp | GGTGAGGGTTTTCCCAGGGGGCGGCGGCCCTTGTCCTaGGCCTTGCGGCTCTGTTCAAACAGGGCAGCCTCG | + |
|
Preference number: 3 (lower is better) Translates to: GEGFPRGRRPLS*ALRLCSNRAAS Trigger: CGAGGCTGCCCTGTTTGAACAGAGCCGCAAGGCTCAGGACAAGGGCCGCCGCCCCCTGGGAAAACCCTCACC 67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000132523.8 |
||
| 3UTR GCA 72 bp | GCGTCCTGCTCTTGCTGCGGGTCCTGCTGCTGCGCATaGTCGGGCCCCAAACTGATGCCATGCTCCGGAGGA | + |
|
Preference number: 3 (lower is better) Translates to: ASCSCCGSCCCA*SGPKLMPCSGG Trigger: TCCTCCGGAGCATGGCATCAGTTTGGGGCCCGAGCATGCGCAGCAGCAGGACCCGCAGCAAGAGCAGGACGC 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000147778.9 |
||
| 3UTR GCA 72 bp | GCATGCTCGGCGTCCTGCTCTTGCTGCGGGTCCTGCTaGTGCGCATGCTCGGGCCCCAAACTGATGCCATGC | + |
|
Preference number: 3 (lower is better) Translates to: ACSASCSCCGSC*CACSGPKLMPC Trigger: GCATGGCATCAGTTTGGGGCCCGAGCATGCGCAGCAGCAGGACCCGCAGCAAGAGCAGGACGCCGAGCATGC 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000147778.9 |
||
| 3UTR GCA 72 bp | CGCCGCTGCGCACTGAGTCGCGGTCATTGCCGCTGCTaGTGTGGTCCGATGCAGTGGCTGCATGGAGCTCGA | + |
|
Preference number: 3 (lower is better) Translates to: RRCALSRGHCRC*CGPMQWLHGAR Trigger: TCGAGCTCCATGCAGCCACTGCATCGGACCACAGCAGCAGCGGCAATGACCGCGACTCAGTGCGCAGCGGCG 67% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000147778.9 |
||
| 3UTR TCA 72 bp | GAGCCTTGCGGCTCTGTTCAAACAGGGCAGCCTCGTTaGAGGACACGCGGCGGCCGGTGGAGCTGGTGGCTA | + |
|
Preference number: 3 (lower is better) Translates to: EPCGSVQTGQPR*RTRGGRWSWWL Trigger: TAGCCACCAGCTCCACCGGCCGCCGCGTGTCCTTCAACGAGGCTGCCCTGTTTGAACAGAGCCGCAAGGCTC 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000132523.8 ENSMUST00000147778.9 |
||
| 3UTR TCA 72 bp | GGGAAGGCCACCGAGTCGCCTGCGCTGGCAATGTACTaGATGAAGTCGGCATGGGGGACGTCCCCCTCCTGC | + |
|
Preference number: 3 (lower is better) Translates to: GKATESPALAMY*MKSAWGTSPSC Trigger: GCAGGAGGGGGACGTCCCCCATGCCGACTTCATTCAGTACATTGCCAGCGCAGGCGACTCGGTGGCCTTCCC 65% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000147778.9 |
||
| 3UTR GCA 72 bp | TGTGCATGCTCGGCGTCCTGCTCTTGCTGCGGGTCCTaGTGCTGCGCATGCTCGGGCCCCAAACTGATGCCA | + |
|
Preference number: 3 (lower is better) Translates to: CACSASCSCCGS*CCACSGPKLMP Trigger: TGGCATCAGTTTGGGGCCCGAGCATGCGCAGCAGCAGGACCCGCAGCAAGAGCAGGACGCCGAGCATGCACA 65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000147778.9 |
||
| 3UTR GCA 72 bp | CCGAGCTATCGCCGCTGCGCACTGAGTCGCGGTCATTaGCGCTGCTGCTGTGGTCCGATGCAGTGGCTGCAT | + |
|
Preference number: 3 (lower is better) Translates to: PSYRRCALSRGH*RCCCGPMQWLH Trigger: ATGCAGCCACTGCATCGGACCACAGCAGCAGCGGCAATGACCGCGACTCAGTGCGCAGCGGCGATAGCTCGG 65% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000147778.9 |
||
| 3UTR CCA 72 bp | CGCGGTCATTGCCGCTGCTGCTGTGGTCCGATGCAGTaGCTGCATGGAGCTCGAGCGAAGCACGAAGGCTCC | + |
|
Preference number: 3 (lower is better) Translates to: RGHCRCCCGPMQ*LHGARAKHEGS Trigger: GGAGCCTTCGTGCTTCGCTCGAGCTCCATGCAGCCACTGCATCGGACCACAGCAGCAGCGGCAATGACCGCG 65% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000147778.9 |
||
| 3UTR CCA 72 bp | CAGCAAGACGGGGAGAGAAGAGTCTCTCGTCGAGGCTaGCTGCTAGCTTGTCTAGCAGGGCCCCGGCGGGCT | + |
|
Preference number: 3 (lower is better) Translates to: QQDGERRVSRRG*LLACLAGPRRA Trigger: AGCCCGCCGGGGCCCTGCTAGACAAGCTAGCAGCCAGCCTCGACGAGAGACTCTTCTCTCCCCGTCTTGCTG 65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000147778.9 |
||
| 3UTR-3UTR CAA 90 bp | TCAGCTGATCCTGGAGGGAGGCTGCACATGCACCTCAGAACCTGCTCCACCAGCGGGTCCTGGAGCCTCTaGCTTCCGGAGGCCACTGCG | + |
|
Preference number: 3 (lower is better) Translates to: SADPGGRLHMHLRTCSTSGSWSL*LPEATA Trigger: CGCAGTGGCCTCCGGAAGCAAGAGGCTCCAGGACCC...GCTGGTGGAGCAGGTTCTGAGGTGCATGTGCAGCCTCCCTCCAGGATCAGCTGA 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000105369.8 ENSMUST00000147778.9 ENSMUST00000169546.9 ENSMUST00000170219.9 |
||
| 3UTR-3UTR CAA 90 bp | GCCAGAGGCTGGGTGCTGGGGTCAACCATATATGGACCGGAGAGTCCAGTCTCGAACAGGGCAGCCTCGTaGAAGGACACGCGGCGGCCG | + |
|
Preference number: 3 (lower is better) Translates to: ARGWVLGSTIYGPESPVSNRAAS*KDTRRP Trigger: CGGCCGCCGCGTGTCCTTCAACGAGGCTGCCCTGTT...CGAGACTGGACTCTCCGGTCCATATATGGTTGACCCCAGCACCCAGCCTCTGGC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000147778.9 |
||
| 3UTR TCA 72 bp | TCCCCTTCTGTCAGGGTGTACCGGCGGCCCTTGTCCTaGGCCTTGCGGCTCTGTTCAAACAGGGCAGCCTCG | + |
|
Preference number: 3 (lower is better) Translates to: SPSVRVYRRPLS*ALRLCSNRAAS Trigger: CGAGGCTGCCCTGTTTGAACAGAGCCGCAAGGCTCAGGACAAGGGCCGCCGGTACACCCTGACAGAAGGGGA 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000147778.9 |
||
| 3UTR TCA 72 bp | AGGCCACCGAGTCGCCTGCGCTGGCAATGTACTGAATaGAGTCGGCATGGGGGACGTCCCCCTCCTGCTCCA | + |
|
Preference number: 3 (lower is better) Translates to: RPPSRLRWQCTE*SRHGGRPPPAP Trigger: TGGAGCAGGAGGGGGACGTCCCCCATGCCGACTTCATTCAGTACATTGCCAGCGCAGGCGACTCGGTGGCCT 64% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000147778.9 |
||
| 3UTR GCA 72 bp | AGCACGAAGGCTCCACAGGTCACGGTAGCTGCACTGTaGATGCTCGGCGTCCTGCTCTTGCTGCGGGTCCTG | + |
|
Preference number: 3 (lower is better) Translates to: STKAPQVTVAAL*MLGVLLLLRVL Trigger: CAGGACCCGCAGCAAGAGCAGGACGCCGAGCATGCACAGTGCAGCTACCGTGACCTGTGGAGCCTTCGTGCT 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000147778.9 |
||
| 3UTR GCA 72 bp | CGAGCGAAGCACGAAGGCTCCACAGGTCACGGTAGCTaGACTGTGCATGCTCGGCGTCCTGCTCTTGCTGCG | + |
|
Preference number: 3 (lower is better) Translates to: RAKHEGSTGHGS*TVHARRPALAA Trigger: CGCAGCAAGAGCAGGACGCCGAGCATGCACAGTGCAGCTACCGTGACCTGTGGAGCCTTCGTGCTTCGCTCG 64% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000147778.9 |
||
| 3UTR GCA 72 bp | TATCGCCGCTGCGCACTGAGTCGCGGTCATTGCCGCTaGTGCTGTGGTCCGATGCAGTGGCTGCATGGAGCT | + |
|
Preference number: 3 (lower is better) Translates to: YRRCALSRGHCR*CCGPMQWLHGA Trigger: AGCTCCATGCAGCCACTGCATCGGACCACAGCAGCAGCGGCAATGACCGCGACTCAGTGCGCAGCGGCGATA 64% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000147778.9 |
||
| 3UTR CCA 72 bp | CTGCGCACTGAGTCGCGGTCATTGCCGCTGCTGCTGTaGTCCGATGCAGTGGCTGCATGGAGCTCGAGCGAA | + |
|
Preference number: 3 (lower is better) Translates to: LRTESRSLPLLL*SDAVAAWSSSE Trigger: TTCGCTCGAGCTCCATGCAGCCACTGCATCGGACCACAGCAGCAGCGGCAATGACCGCGACTCAGTGCGCAG 64% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000147778.9 |
||
| 3UTR CCA 72 bp | TCCACCGCCAGGCTCCTCCTCGATGACAGGAATGGATaGGTCATCACCCGTGATGGGCAGCGCACGGCCTTC | + |
|
Preference number: 3 (lower is better) Translates to: STARLLLDDRNG*VITRDGQRTAF Trigger: GAAGGCCGTGCGCTGCCCATCACGGGTGATGACCCATCCATTCCTGTCATCGAGGAGGAGCCTGGCGGTGGA 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000147778.9 |
||
| 3UTR-3UTR CAA 90 bp | AAAGAGCGTCCGTCTTCTCGTCGATGCTGTAATCGCGGCGCGGCCTGCGTGGCCATAGCCAAGCTGTCCTaGGAGGTGGTAGCTGGGTGG | + |
|
Preference number: 3 (lower is better) Translates to: KERPSSRRCCNRGAACVAIAKLS*EVVAGW Trigger: CCACCCAGCTACCACCTCCAAGGACAGCTTGGCTAT...GGCCACGCAGGCCGCGCCGCGATTACAGCATCGACGAGAAGACGGACGCTCTTT 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000147778.9 |
||
| 3UTR TCA 72 bp | CCGTTGTGTCCAAAGCCCAAGGCTCTCGGGGAGGAATaGGACGGGGAGCCTGTGCACATGCAGAGAGCAGGC | + |
|
Preference number: 3 (lower is better) Translates to: PLCPKPKALGEE*DGEPVHMQRAG Trigger: GCCTGCTCTCTGCATGTGCACAGGCTCCCCGTCTCATTCCTCCCCGAGAGCCTTGGGCTTTGGACACAACGG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000105369.8 ENSMUST00000147778.9 ENSMUST00000169546.9 ENSMUST00000170219.9 |
||
| 3UTR TCA 72 bp | TCCTGCTCCATGCTCTCACTGGCTGCCCGCTGCCGCTaGAAGTGGTGCCTCTTAGGGGAACCTCTCGTGTCC | + |
|
Preference number: 3 (lower is better) Translates to: SCSMLSLAARCR*KWCLLGEPLVS Trigger: GGACACGAGAGGTTCCCCTAAGAGGCACCACTTTCAGCGGCAGCGGGCAGCCAGTGAGAGCATGGAGCAGGA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000147778.9 |
||
| 3UTR GCA 72 bp | CGCTGTTGCCACCATTCCCACAGCAGCCCCATGTGCTaGCGGAGAAGCAGCAGAGAGGCAGGTCCAGTACAG | + |
|
Preference number: 3 (lower is better) Translates to: RCCHHSHSSPMC*RRSSREAGPVQ Trigger: CTGTACTGGACCTGCCTCTCTGCTGCTTCTCCGGCAGCACATGGGGCTGCTGTGGGAATGGTGGCAACAGCG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000105369.8 ENSMUST00000147778.9 ENSMUST00000169546.9 ENSMUST00000170219.9 |
||
| 3UTR GCA 72 bp | GTGGAGGGTCAGCTGATCCTGGAGGGAGGCTGCACATaGACCTCAGAACCTGCTCCACCAGCATCTGTGGCC | + |
|
Preference number: 3 (lower is better) Translates to: VEGQLILEGGCT*TSEPAPPASVA Trigger: GGCCACAGATGCTGGTGGAGCAGGTTCTGAGGTGCATGTGCAGCCTCCCTCCAGGATCAGCTGACCCTCCAC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000105369.8 ENSMUST00000147778.9 ENSMUST00000169546.9 ENSMUST00000170219.9 |
||
| 3UTR GCA 72 bp | CCAAGGCTCTCGGGGAGGAATGAGACGGGGAGCCTGTaGACATGCAGAGAGCAGGCGCGGTCGGTTATTGCT | + |
|
Preference number: 3 (lower is better) Translates to: PRLSGRNETGSL*TCREQARSVIA Trigger: AGCAATAACCGACCGCGCCTGCTCTCTGCATGTGCACAGGCTCCCCGTCTCATTCCTCCCCGAGAGCCTTGG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000105369.8 ENSMUST00000147778.9 ENSMUST00000169546.9 ENSMUST00000170219.9 |
||
| 3UTR GCA 72 bp | TCCAGGCTGGCATGTCGGCGTAGCCGAGTGAAGAATTaGAAAACAGTGCCCGACCCGGAGGAGCCTGTGCCC | + |
|
Preference number: 3 (lower is better) Translates to: SRLACRRSRVKN*KTVPDPEEPVP Trigger: GGGCACAGGCTCCTCCGGGTCGGGCACTGTTTTGCAATTCTTCACTCGGCTACGCCGACATGCCAGCCTGGA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000147778.9 |
||
| 3UTR GCA 72 bp | GTCATTGCCGCTGCTGCTGTGGTCCGATGCAGTGGCTaGATGGAGCTCGAGCGAAGCACGAAGGCTCCACAG | + |
|
Preference number: 3 (lower is better) Translates to: VIAAAAVVRCSG*MELERSTKAPQ Trigger: CTGTGGAGCCTTCGTGCTTCGCTCGAGCTCCATGCAGCCACTGCATCGGACCACAGCAGCAGCGGCAATGAC 62% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000147778.9 |
||
| 3UTR GCA 72 bp | GTTCTGAAACTTCGTCGCCTGCTCCGCGCCCCTCGATaGTCGCATAGCCACTGTCCATCTGTAGCAGGCGGC | + |
|
Preference number: 3 (lower is better) Translates to: VLKLRRLLRAPR*SHSHCPSVAGG Trigger: GCCGCCTGCTACAGATGGACAGTGGCTATGCGAGCATCGAGGGGCGCGGAGCAGGCGACGAAGTTTCAGAAC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000147778.9 |
||
| 3UTR GCA 72 bp | GGAACTCATGGAAAAGAGCGTCCGTCTTCTCGTCGATaGTGTAATCGCGGCGCGGCCTGCGTGGCCAGGCTC | + |
|
Preference number: 3 (lower is better) Translates to: GTHGKERPSSRR*CNRGAACVARL Trigger: GAGCCTGGCCACGCAGGCCGCGCCGCGATTACAGCATCGACGAGAAGACGGACGCTCTTTTCCATGAGTTCC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000147778.9 |
||
| 3UTR CCA 72 bp | TTGCCGCTGCTGCTGTGGTCCGATGCAGTGGCTGCATaGAGCTCGAGCGAAGCACGAAGGCTCCACAGGTCA | + |
|
Preference number: 3 (lower is better) Translates to: LPLLLWSDAVAA*SSSEARRLHRS Trigger: TGACCTGTGGAGCCTTCGTGCTTCGCTCGAGCTCCATGCAGCCACTGCATCGGACCACAGCAGCAGCGGCAA 62% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000147778.9 |
||
| 3UTR-3UTR CAA 90 bp | AACTTGAAGCTGCCACCTGGGCTGTTCTGTCCGTTGTGTCCAAAGCCCAAGGCTGGGTCCTGGAGCCTCTaGCTTCCGGAGGCCACTGCG | + |
|
Preference number: 3 (lower is better) Translates to: NLKLPPGLFCPLCPKPKAGSWSL*LPEATA Trigger: CGCAGTGGCCTCCGGAAGCAAGAGGCTCCAGGACCC...AGCCTTGGGCTTTGGACACAACGGACAGAACAGCCCAGGTGGCAGCTTCAAGTT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000105369.8 ENSMUST00000147778.9 ENSMUST00000169546.9 ENSMUST00000170219.9 |
||
| 3UTR-3UTR CAA 90 bp | GGAAACTTGAAGCTGCCACCTGGGCTGTTCTGTCCGTTGTGTCCAAAGCCCAAGGGGTCCTGGAGCCTCTaGCTTCCGGAGGCCACTGCG | + |
|
Preference number: 3 (lower is better) Translates to: GNLKLPPGLFCPLCPKPKGSWSL*LPEATA Trigger: CGCAGTGGCCTCCGGAAGCAAGAGGCTCCAGGACCC...CTTGGGCTTTGGACACAACGGACAGAACAGCCCAGGTGGCAGCTTCAAGTTTCC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000105369.8 ENSMUST00000147778.9 ENSMUST00000169546.9 ENSMUST00000170219.9 |
||
| 3UTR TCA 72 bp | TGGCTCCATCCAGGCTGGCATGTCGGCGTAGCCGAGTaGAGAATTGCAAAACAGTGCCCGACCCGGAGGAGC | + |
|
Preference number: 3 (lower is better) Translates to: WLHPGWHVGVAE*RIAKQCPTRRS Trigger: GCTCCTCCGGGTCGGGCACTGTTTTGCAATTCTTCACTCGGCTACGCCGACATGCCAGCCTGGATGGAGCCA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000147778.9 |
||
| 3UTR GCA 72 bp | TATGTGCACACTTGGGATTTGGGGGCCGTGTACCCATaGACGGCCACCTCAGGTTGCTCCCGCTGTTGCCAC | + |
|
Preference number: 3 (lower is better) Translates to: YVHTWDLGAVYP*TATSGCSRCCH Trigger: GTGGCAACAGCGGGAGCAACCTGAGGTGGCCGTGCATGGGTACACGGCCCCCAAATCCCAAGTGTGCACATA 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000105369.8 ENSMUST00000147778.9 ENSMUST00000169546.9 ENSMUST00000170219.9 |
||
| 3UTR GCA 72 bp | AGAATTGCAAAACAGTGCCCGACCCGGAGGAGCCTGTaGCCATCTCCCCAGGCACTGTTTCAGGCCCAGCAG | + |
|
Preference number: 3 (lower is better) Translates to: RIAKQCPTRRSL*PSPQALFQAQQ Trigger: CTGCTGGGCCTGAAACAGTGCCTGGGGAGATGGGCACAGGCTCCTCCGGGTCGGGCACTGTTTTGCAATTCT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000147778.9 |
||
| 3UTR CCA 72 bp | GCGCTAAGTGCCCAGGGGACACTATATGTGCACACTTaGGATTTGGGGGCCGTGTACCCATGCACGGCCACC | + |
|
Preference number: 3 (lower is better) Translates to: ALSAQGTLYVHT*DLGAVYPCTAT Trigger: GGTGGCCGTGCATGGGTACACGGCCCCCAAATCCCAAGTGTGCACATATAGTGTCCCCTGGGCACTTAGCGC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000105369.8 ENSMUST00000147778.9 ENSMUST00000169546.9 ENSMUST00000170219.9 |
||
| 3UTR CCA 72 bp | CCATCTCCCCAGGCACTGTTTCAGGCCCAGCAGCCTTaGCACCCCGGGTACCTGCATCTAACGAAATGCCCT | + |
|
Preference number: 3 (lower is better) Translates to: PSPQALFQAQQP*HPGYLHLTKCP Trigger: AGGGCATTTCGTTAGATGCAGGTACCCGGGGTGCCAAGGCTGCTGGGCCTGAAACAGTGCCTGGGGAGATGG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000147778.9 |
||
| 3UTR TCA 72 bp | TTACTGCCTGCCAGTGCTCACGAGTGGAGGGTCAGCTaGTCCTGGAGGGAGGCTGCACATGCACCTCAGAAC | + |
|
Preference number: 3 (lower is better) Translates to: LLPASAHEWRVS*SWREAAHAPQN Trigger: GTTCTGAGGTGCATGTGCAGCCTCCCTCCAGGATCAGCTGACCCTCCACTCGTGAGCACTGGCAGGCAGTAA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000105369.8 ENSMUST00000147778.9 ENSMUST00000169546.9 ENSMUST00000170219.9 |
||
| 3UTR GCA 72 bp | AACCTGCTCCACCAGCATCTGTGGCCAGAGGCTGGGTaGTGGGGTCAACCATATATGGACCGGAGAGTCCAG | + |
|
Preference number: 3 (lower is better) Translates to: NLLHQHLWPEAG*WGQPYMDRRVQ Trigger: CTGGACTCTCCGGTCCATATATGGTTGACCCCAGCACCCAGCCTCTGGCCACAGATGCTGGTGGAGCAGGTT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000105369.8 ENSMUST00000147778.9 ENSMUST00000169546.9 ENSMUST00000170219.9 |
||
| 3UTR CCA 72 bp | TGTGGCCAGAGGCTGGGTGCTGGGGTCAACCATATATaGACCGGAGAGTCCAGTCTCGTCATCCTCCCTGCA | + |
|
Preference number: 3 (lower is better) Translates to: CGQRLGAGVNHI*TGESSLVILPA Trigger: TGCAGGGAGGATGACGAGACTGGACTCTCCGGTCCATATATGGTTGACCCCAGCACCCAGCCTCTGGCCACA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000105369.8 ENSMUST00000147778.9 ENSMUST00000169546.9 ENSMUST00000170219.9 |
||
| 3UTR-3UTR CAA 90 bp | CACTCATGGATAGTAGCGATTTTGAGGGGCGGTAGGTGGAGGTGGGTGAGGCGGATAGCCAAGCTGTCCTaGGAGGTGGTAGCTGGGTGG | + |
|
Preference number: 3 (lower is better) Translates to: HSWIVAILRGGRWRWVRRIAKLS*EVVAGW Trigger: CCACCCAGCTACCACCTCCAAGGACAGCTTGGCTAT...CCGCCTCACCCACCTCCACCTACCGCCCCTCAAAATCGCTACTATCCATGAGTG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000123967.2 ENSMUST00000147778.9 |
||
| 3UTR CCA 72 bp | TCAGAACCTGCTCCACCAGCATCTGTGGCCAGAGGCTaGGTGCTGGGGTCAACCATATATGGACCGGAGAGT | + |
|
Preference number: 3 (lower is better) Translates to: SEPAPPASVARG*VLGSTIYGPES Trigger: ACTCTCCGGTCCATATATGGTTGACCCCAGCACCCAGCCTCTGGCCACAGATGCTGGTGGAGCAGGTTCTGA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000105369.8 ENSMUST00000147778.9 ENSMUST00000169546.9 ENSMUST00000170219.9 |
||
| 3UTR GCA 72 bp | CCTGTGCACATGCAGAGAGCAGGCGCGGTCGGTTATTaGTCAGAGAGGAAAGGTAGAGCGCATACCATGGAC | + |
|
Preference number: 3 (lower is better) Translates to: PVHMQRAGAVGY*SERKGRAHTMD Trigger: GTCCATGGTATGCGCTCTACCTTTCCTCTCTGAGCAATAACCGACCGCGCCTGCTCTCTGCATGTGCACAGG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000105369.8 ENSMUST00000147778.9 ENSMUST00000169546.9 ENSMUST00000170219.9 |
||
| 3UTR GCA 72 bp | ATGAGTGTGAGGATGTGCACGTGTGCGGTGACGCGGTaGATCGTCAAAATGAGGGTCATGGCGCAGGAACTC | + |
|
Preference number: 3 (lower is better) Translates to: MSVRMCTCAVTR*IVKMRVMAQEL Trigger: GAGTTCCTGCGCCATGACCCTCATTTTGACGATGCACCGCGTCACCGCACACGTGCACATCCTCACACTCAT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000147778.9 |
||
| 3UTR-3UTR CAA 90 bp | GGCTCTCGGGGAGGAATGAGACGGGGAGCCTGTGCACATGCAGAGAGCAGGCGCAGTCTGCCCTATCTTTaGGCAATAAATAAAGCTTGG | + |
|
Preference number: 3 (lower is better) Translates to: GSRGGMRRGACAHAESRRSLPYL*AINKAW Trigger: CCAAGCTTTATTTATTGCCAAAAGATAGGGCAGACT...GCGCCTGCTCTCTGCATGTGCACAGGCTCCCCGTCTCATTCCTCCCCGAGAGCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000105369.8 ENSMUST00000147778.9 ENSMUST00000169546.9 ENSMUST00000170219.9 |
||
| 3UTR GCA 72 bp | ATTGCTTCCGCGCATGAGTGTGAGGATGTGCACGTGTaGGGTGACGCGGTGCATCGTCAAAATGAGGGTCAT | + |
|
Preference number: 3 (lower is better) Translates to: IASAHECEDVHV*GDAVHRQNEGH Trigger: ATGACCCTCATTTTGACGATGCACCGCGTCACCGCACACGTGCACATCCTCACACTCATGCGCGGAAGCAAT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000147778.9 |
||
| 3UTR CCA 72 bp | TTAGGGGAACCTCTCGTGTCCAGACTGGACGCTCTCTaGCTGGGCTCCAGCTTCCATTTCTTGACCTTGAAG | + |
|
Preference number: 3 (lower is better) Translates to: LGEPLVSRLDAL*LGSSFHFLTLK Trigger: CTTCAAGGTCAAGAAATGGAAGCTGGAGCCCAGCCAGAGAGCGTCCAGTCTGGACACGAGAGGTTCCCCTAA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000147778.9 |
||
| 3UTR-3UTR CAA 90 bp | AGTGGGCAGGCACTCACAGCGAGTCTGCCCTATCTTTTGGCAATAAATAAAGCTTCATCCTCCCTGCAGTaGAGCCTGGGTCCTGGAGCC | + |
|
Preference number: 3 (lower is better) Translates to: SGQALTASLPYLLAINKASSSLQ*SLGPGA Trigger: GGCTCCAGGACCCAGGCTCAACTGCAGGGAGGATGA...AGCTTTATTTATTGCCAAAAGATAGGGCAGACTCGCTGTGAGTGCCTGCCCACT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000105369.8 ENSMUST00000147778.9 ENSMUST00000169546.9 ENSMUST00000170219.9 |
||
| 3UTR CCA 72 bp | GGGTGTTTGGAAATATGGAGCAGGCGGGGCACAGGGTaGCCTGCAGAGAAAACCCAGAGCAAACAAATATGC | + |
|
Preference number: 3 (lower is better) Translates to: GCLEIWSRRGTG*PAEKTQSKQIC Trigger: GCATATTTGTTTGCTCTGGGTTTTCTCTGCAGGCCACCCTGTGCCCCGCCTGCTCCATATTTCCAAACACCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000169546.9 ENSMUST00000170219.9 |
||
| 3UTR-3UTR CAA 90 bp | GGAGCCTGTGCACATGCAGAGAGCAGGCGCGGTCGGTTATTGCTCAGAGAGGAAAGTCTGCCCTATCTTTaGGCAATAAATAAAGCTTGG | + |
|
Preference number: 3 (lower is better) Translates to: GACAHAESRRGRLLLREESLPYL*AINKAW Trigger: CCAAGCTTTATTTATTGCCAAAAGATAGGGCAGACT...TTCCTCTCTGAGCAATAACCGACCGCGCCTGCTCTCTGCATGTGCACAGGCTCC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000105369.8 ENSMUST00000147778.9 ENSMUST00000169546.9 ENSMUST00000170219.9 |
||
| 3UTR TCA 72 bp | CCCTATCTTTTGGCAATAAATAAAGCTTGGGAAACTTaGAGCTGCCACCTGGGCTGTTCTGTCCGTTGTGTC | + |
|
Preference number: 3 (lower is better) Translates to: PYLLAINKAWET*SCHLGCSVRCV Trigger: GACACAACGGACAGAACAGCCCAGGTGGCAGCTTCAAGTTTCCCAAGCTTTATTTATTGCCAAAAGATAGGG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000105369.8 ENSMUST00000147778.9 ENSMUST00000169546.9 ENSMUST00000170219.9 |
||
| 3UTR TCA 72 bp | GAAAACCCAGAGCAAACAAATATGCAGAGACATTTATaGTTAACCAGACAACACGACCAACCACAGAGGGCG | + |
|
Preference number: 3 (lower is better) Translates to: ENPEQTNMQRHL*LTRQHDQPQRA Trigger: CGCCCTCTGTGGTTGGTCGTGTTGTCTGGTTAATCATAAATGTCTCTGCATATTTGTTTGCTCTGGGTTTTC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000169546.9 ENSMUST00000170219.9 |
||
| CDS-3UTR CCA 90 bp | GGGCCGACTGAGTGGCCGGTGAGGGTTTTCCCAGGGGGCGGCGGCCCTTGTCCTCCGCCGTGGGGCGGCTaGTGGCATTGTCCCACGAAG | + |
|
Preference number: 4 (lower is better) Translates to: GPTEWPVRVFPGGGGPCPPPWGG*WHCPTK Trigger: CTTCGTGGGACAATGCCACCAGCCGCCCCACGGCGG...AGGACAAGGGCCGCCGCCCCCTGGGAAAACCCTCACCGGCCACTCAGTCGGCCC 71% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000132523.8 |
||
| CDS-3UTR CCA 90 bp | AAGGCGGGTGCTGCCCCTCCACCTCCGGAACCCGAGCCCGAGCTATCGCCGCTGGCCCTGTTGAAGCGCTaGTGCACCTCCCAGCAGCGT | + |
|
Preference number: 4 (lower is better) Translates to: KAGAAPPPPEPEPELSPLALLKR*CTSQQR Trigger: ACGCTGCTGGGAGGTGCACCAGCGCTTCAACAGGGC...CAGCGGCGATAGCTCGGGCTCGGGTTCCGGAGGTGGAGGGGCAGCACCCGCCTT 69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000147778.9 |
||
| CDS-3UTR CCA 90 bp | CTCTCGGGGAGGAATGAGACGGGGAGCCTGTGCACATGCAGAGAGCAGGCGCGGAGACTCCGGAGGGGGTaGGAAGGCGGGTGCTGCCCC | + |
|
Preference number: 4 (lower is better) Translates to: LSGRNETGSLCTCREQARRLRRG*EGGCCP Trigger: GGGGCAGCACCCGCCTTCCCACCCCCTCCGGAGTCT...CCGCGCCTGCTCTCTGCATGTGCACAGGCTCCCCGTCTCATTCCTCCCCGAGAG 69% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000105369.8 ENSMUST00000169546.9 ENSMUST00000170219.9 |
||
| CDS-3UTR TCA 90 bp | CTCTCGGGGAGGAATGAGACGGGGAGCCTGTGCACATGCAGAGAGCAGGCGCGGGGAGCTGGGGCCGACTaGGTGGCCGGTGAGGGTTTT | + |
|
Preference number: 4 (lower is better) Translates to: LSGRNETGSLCTCREQARGAGAD*VAGEGF Trigger: AAAACCCTCACCGGCCACTCAGTCGGCCCCAGCTCC...CCGCGCCTGCTCTCTGCATGTGCACAGGCTCCCCGTCTCATTCCTCCCCGAGAG 67% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 3 transcripts: ENSMUST00000105369.8 ENSMUST00000169546.9 ENSMUST00000170219.9 |
||
| CDS-3UTR GCA 90 bp | CTCTCGGGGAGGAATGAGACGGGGAGCCTGTGCACATGCAGAGAGCAGGCGCGGTCGGCGTCCTGCTCTTaGTGCGGGTCCTGCTGCTGC | + |
|
Preference number: 4 (lower is better) Translates to: LSGRNETGSLCTCREQARSASCS*CGSCCC Trigger: GCAGCAGCAGGACCCGCAGCAAGAGCAGGACGCCGA...CCGCGCCTGCTCTCTGCATGTGCACAGGCTCCCCGTCTCATTCCTCCCCGAGAG 67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000105369.8 ENSMUST00000169546.9 ENSMUST00000170219.9 |
||
| CDS-3UTR GCA 90 bp | CTCTCGGGGAGGAATGAGACGGGGAGCCTGTGCACATGCAGAGAGCAGGCGCGGGGCTGCGGGGAGGACTaGGGGCTGGAGCAGGAAGTT | + |
|
Preference number: 4 (lower is better) Translates to: LSGRNETGSLCTCREQARGCGED*GLEQEV Trigger: AACTTCCTGCTCCAGCCCGCAGTCCTCCCCGCAGCC...CCGCGCCTGCTCTCTGCATGTGCACAGGCTCCCCGTCTCATTCCTCCCCGAGAG 67% GC, longest homopolymer 4 nt, total homopolymer stretches 20 nt. Matches the following 3 transcripts: ENSMUST00000105369.8 ENSMUST00000169546.9 ENSMUST00000170219.9 |
||
| CDS-3UTR CCA 90 bp | GGGGCGGCGGCCCTTGTCCTGAGCCTTGCGGCTCTGTTCAAACAGGGCAGCCTCGCCCTGTTGAAGCGCTaGTGCACCTCCCAGCAGCGT | + |
|
Preference number: 4 (lower is better) Translates to: GAAALVLSLAALFKQGSLALLKR*CTSQQR Trigger: ACGCTGCTGGGAGGTGCACCAGCGCTTCAACAGGGC...GAGGCTGCCCTGTTTGAACAGAGCCGCAAGGCTCAGGACAAGGGCCGCCGCCCC 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000132523.8 |
||
| CDS-3UTR CCA 90 bp | GGCTCTCGGGGAGGAATGAGACGGGGAGCCTGTGCACATGCAGAGAGCAGGCGCGAGGTGGTAGCTGGGTaGGGTGTGGCCGCTGCACTG | + |
|
Preference number: 4 (lower is better) Translates to: GSRGGMRRGACAHAESRREVVAG*GVAAAL Trigger: CAGTGCAGCGGCCACACCCCACCCAGCTACCACCTC...GCGCCTGCTCTCTGCATGTGCACAGGCTCCCCGTCTCATTCCTCCCCGAGAGCC 67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000105369.8 ENSMUST00000169546.9 ENSMUST00000170219.9 |
||
| 3UTR CAA 72 bp | CCCGAGCTATCGCCGCTGCGCACTGAGTCGCGGTCATaGCCGCTGCTGCTGTGGTCCGATGCAGTGGCTGCA | + |
|
Preference number: 4 (lower is better) Translates to: PELSPLRTESRS*PLLLWSDAVAA Trigger: TGCAGCCACTGCATCGGACCACAGCAGCAGCGGCAATGACCGCGACTCAGTGCGCAGCGGCGATAGCTCGGG 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000147778.9 |
||
| CDS-3UTR TCA 90 bp | CTGTTCAAACAGGGCAGCCTCGTTGAAGGACACGCGGCGGCCGGTGGAGCTGGTCCTCCATGGCCCTGTTaGAGCGCTGGTGCACCTCCC | + |
|
Preference number: 4 (lower is better) Translates to: LFKQGSLVEGHAAAGGAGPPWPC*SAGAPP Trigger: GGGAGGTGCACCAGCGCTTCAACAGGGCCATGGAGG...ACCAGCTCCACCGGCCGCCGCGTGTCCTTCAACGAGGCTGCCCTGTTTGAACAG 66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000132523.8 ENSMUST00000147778.9 |
||
| CDS-3UTR TCA 90 bp | AAAGAGCGTCCGTCTTCTCGTCGATGCTGTAATCGCGGCGCGGCCTGCGTGGCCCCTCCATGGCCCTGTTaGAGCGCTGGTGCACCTCCC | + |
|
Preference number: 4 (lower is better) Translates to: KERPSSRRCCNRGAACVAPPWPC*SAGAPP Trigger: GGGAGGTGCACCAGCGCTTCAACAGGGCCATGGAGG...GGCCACGCAGGCCGCGCCGCGATTACAGCATCGACGAGAAGACGGACGCTCTTT 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000147778.9 |
||
| CDS-3UTR TCA 90 bp | GGCCGTGTACCCATGCACGGCCACCTCAGGTTGCTCCCGCTGTTGCCACCATTCGCTGCCCGCTGCCGCTaGAAGTGGTGCCTCTTAGGG | + |
|
Preference number: 4 (lower is better) Translates to: GRVPMHGHLRLLPLLPPFAARCR*KWCLLG Trigger: CCCTAAGAGGCACCACTTTCAGCGGCAGCGGGCAGC...GAATGGTGGCAACAGCGGGAGCAACCTGAGGTGGCCGTGCATGGGTACACGGCC 66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000105369.8 ENSMUST00000169546.9 ENSMUST00000170219.9 |
||
| CDS-3UTR GCA 90 bp | CTCTCGGGGAGGAATGAGACGGGGAGCCTGTGCACATGCAGAGAGCAGGCGCGGCTCCGCGCCCCTCGATaGTCGCATAGCCACTGTCCA | + |
|
Preference number: 4 (lower is better) Translates to: LSGRNETGSLCTCREQARLRAPR*SHSHCP Trigger: TGGACAGTGGCTATGCGAGCATCGAGGGGCGCGGAG...CCGCGCCTGCTCTCTGCATGTGCACAGGCTCCCCGTCTCATTCCTCCCCGAGAG 66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000105369.8 ENSMUST00000169546.9 ENSMUST00000170219.9 |
||
| CDS-3UTR CCA 90 bp | AAACTGATGCCATGCTCCGGAGGAGTCTCAGGGCTCGCTCCTCCCGCCGCCTCTCCGTGGGGCGGCTGGTaGCATTGTCCCACGAAGTCG | + |
|
Preference number: 4 (lower is better) Translates to: KLMPCSGGVSGLAPPAASPWGGW*HCPTKS Trigger: CGACTTCGTGGGACAATGCCACCAGCCGCCCCACGG...AGAGGCGGCGGGAGGAGCGAGCCCTGAGACTCCTCCGGAGCATGGCATCAGTTT 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000147778.9 |
||
| CDS-3UTR CCA 90 bp | GGCTCTCGGGGAGGAATGAGACGGGGAGCCTGTGCACATGCAGAGAGCAGGCGCTGGCTCCATCCAGGCTaGCATGTCGGCGTAGCCGAG | + |
|
Preference number: 4 (lower is better) Translates to: GSRGGMRRGACAHAESRRWLHPG*HVGVAE Trigger: CTCGGCTACGCCGACATGCCAGCCTGGATGGAGCCA...GCGCCTGCTCTCTGCATGTGCACAGGCTCCCCGTCTCATTCCTCCCCGAGAGCC 66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000105369.8 ENSMUST00000169546.9 ENSMUST00000170219.9 |
||
| CDS-3UTR CCA 90 bp | GGCTCTCGGGGAGGAATGAGACGGGGAGCCTGTGCACATGCAGAGAGCAGGCGCAGGCCTCAAAGCAGGTaGAGACTCCGGAGGGGGTGG | + |
|
Preference number: 4 (lower is better) Translates to: GSRGGMRRGACAHAESRRRPQSR*RLRRGW Trigger: CCACCCCCTCCGGAGTCTCCACCTGCTTTGAGGCCT...GCGCCTGCTCTCTGCATGTGCACAGGCTCCCCGTCTCATTCCTCCCCGAGAGCC 66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000105369.8 ENSMUST00000169546.9 ENSMUST00000170219.9 |
||
| CDS-3UTR CCA 90 bp | GGAAATCCCCTTCTGTCAGGGTGTACCGGCGGCCCTTGTCCTGAGCCTTGCGGCTCTCTGCTTCCTCCATaGCCCGTGGGGCGGCTGGTG | + |
|
Preference number: 4 (lower is better) Translates to: GNPLLSGCTGGPCPEPCGSLLPP*PVGRLV Trigger: CACCAGCCGCCCCACGGGCCATGGAGGAAGCAGAGA...GCCGCAAGGCTCAGGACAAGGGCCGCCGGTACACCCTGACAGAAGGGGATTTCC 66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000123967.2 |
||
| 3UTR CAA 72 bp | GTACCCATGCACGGCCACCTCAGGTTGCTCCCGCTGTaGCCACCATTCCCACAGCAGCCCCATGTGCTGCCG | + |
|
Preference number: 4 (lower is better) Translates to: VPMHGHLRLLPL*PPFPQQPHVLP Trigger: CGGCAGCACATGGGGCTGCTGTGGGAATGGTGGCAACAGCGGGAGCAACCTGAGGTGGCCGTGCATGGGTAC 65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000105369.8 ENSMUST00000147778.9 ENSMUST00000169546.9 ENSMUST00000170219.9 |
||
| 3UTR CAA 72 bp | TTTGGGGGCCGTGTACCCATGCACGGCCACCTCAGGTaGCTCCCGCTGTTGCCACCATTCCCACAGCAGCCC | + |
|
Preference number: 4 (lower is better) Translates to: FGGRVPMHGHLR*LPLLPPFPQQP Trigger: GGGCTGCTGTGGGAATGGTGGCAACAGCGGGAGCAACCTGAGGTGGCCGTGCATGGGTACACGGCCCCCAAA 65% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000105369.8 ENSMUST00000147778.9 ENSMUST00000169546.9 ENSMUST00000170219.9 |
||
| 3UTR CAA 72 bp | ATCCTCCCTGCAGTTGAGCCTGGGTCCTGGAGCCTCTaGCTTCCGGAGGCCACTGCGCTAAGTGCCCAGGGG | + |
|
Preference number: 4 (lower is better) Translates to: ILPAVEPGSWSL*LPEATALSAQG Trigger: CCCCTGGGCACTTAGCGCAGTGGCCTCCGGAAGCAAGAGGCTCCAGGACCCAGGCTCAACTGCAGGGAGGAT 65% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000105369.8 ENSMUST00000147778.9 ENSMUST00000169546.9 ENSMUST00000170219.9 |
||
| CDS-3UTR TCA 90 bp | CGGGGAGCCTGTGCACATGCAGAGAGCAGGCGCGGTCGGTTATTGCTCAGAGAGGGAGCTGGGGCCGACTaGGTGGCCGGTGAGGGTTTT | + |
|
Preference number: 4 (lower is better) Translates to: RGACAHAESRRGRLLLREGAGAD*VAGEGF Trigger: AAAACCCTCACCGGCCACTCAGTCGGCCCCAGCTCC...CTCTCTGAGCAATAACCGACCGCGCCTGCTCTCTGCATGTGCACAGGCTCCCCG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000105369.8 ENSMUST00000169546.9 ENSMUST00000170219.9 |
||
| CDS-3UTR TCA 90 bp | GTTACTGCCTGCCAGTGCTCACGAGTGGAGGGTCAGCTGATCCTGGAGGGAGGCATCGCCGCTGCGCACTaGGTCGCGGTCATTGCCGCT | + |
|
Preference number: 4 (lower is better) Translates to: VTACQCSRVEGQLILEGGIAAAH*VAVIAA Trigger: AGCGGCAATGACCGCGACTCAGTGCGCAGCGGCGAT...GCCTCCCTCCAGGATCAGCTGACCCTCCACTCGTGAGCACTGGCAGGCAGTAAC 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000105369.8 ENSMUST00000169546.9 ENSMUST00000170219.9 |
||
| CDS-3UTR GCA 90 bp | CCGGTGGAGCTGGTGGCTAGGAAGCGCTCTGTTTCGGTGTCCTGGCCCTCGGGGACAGCACCACCAGCGTaGCTCCAACGAACAGCGACA | + |
|
Preference number: 4 (lower is better) Translates to: PVELVARKRSVSVSWPSGTAPPA*LQRTAT Trigger: TGTCGCTGTTCGTTGGAGGCACGCTGGTGGTGCTGT...CCCCGAGGGCCAGGACACCGAAACAGAGCGCTTCCTAGCCACCAGCTCCACCGG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000132523.8 ENSMUST00000147778.9 |
||
| CDS-3UTR GCA 90 bp | CCGGTGGAGCTGGTGGCTAGGAAGCGCTCTGTTTCGGTGTCCTGGCCCTCGGGGCCTCCCAGCAGCGTTTaGAGAGCAGAAGAACGCCAG | + |
|
Preference number: 4 (lower is better) Translates to: PVELVARKRSVSVSWPSGPPSSV*RAEERQ Trigger: CTGGCGTTCTTCTGCTCTGCAAACGCTGCTGGGAGG...CCCCGAGGGCCAGGACACCGAAACAGAGCGCTTCCTAGCCACCAGCTCCACCGG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000132523.8 ENSMUST00000147778.9 |
||
| CDS-3UTR GCA 90 bp | GCCAGAGGCTGGGTGCTGGGGTCAACCATATATGGACCGGAGAGTCCAGTCTCGGTGGGGTGTGGCCGCTaGACTGGCCTCCCCCGAATC | + |
|
Preference number: 4 (lower is better) Translates to: ARGWVLGSTIYGPESPVSVGCGR*TGLPRI Trigger: GATTCGGGGGAGGCCAGTGCAGCGGCCACACCCCAC...CGAGACTGGACTCTCCGGTCCATATATGGTTGACCCCAGCACCCAGCCTCTGGC 64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000105369.8 ENSMUST00000169546.9 ENSMUST00000170219.9 |
||
| CDS-3UTR GCA 90 bp | GTTACTGCCTGCCAGTGCTCACGAGTGGAGGGTCAGCTGATCCTGGAGGGAGGCACCCGGAGGAGCCTGTaGCCATCTCCCCAGGCACTG | + |
|
Preference number: 4 (lower is better) Translates to: VTACQCSRVEGQLILEGGTRRSL*PSPQAL Trigger: CAGTGCCTGGGGAGATGGGCACAGGCTCCTCCGGGT...GCCTCCCTCCAGGATCAGCTGACCCTCCACTCGTGAGCACTGGCAGGCAGTAAC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000105369.8 ENSMUST00000169546.9 ENSMUST00000170219.9 |
||
| CDS-3UTR GCA 90 bp | GGGAGGAATGAGACGGGGAGCCTGTGCACATGCAGAGAGCAGGCGCGGTCGGTTCCGTCTTCTCGTCGATaGTGTAATCGCGGCGCGGCC | + |
|
Preference number: 4 (lower is better) Translates to: GRNETGSLCTCREQARSVPSSRR*CNRGAA Trigger: GGCCGCGCCGCGATTACAGCATCGACGAGAAGACGG...AACCGACCGCGCCTGCTCTCTGCATGTGCACAGGCTCCCCGTCTCATTCCTCCC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000105369.8 ENSMUST00000169546.9 ENSMUST00000170219.9 |
||
| CDS-3UTR CCA 90 bp | TGGAGCTGGTGGCTAGGAAGCGCTCTGTTTCGGTGTCCTGGCCCTCGGGGTCTTCCGTGGGGCGGCTGGTaGCATTGTCCCACGAAGTCG | + |
|
Preference number: 4 (lower is better) Translates to: WSWWLGSALFRCPGPRGLPWGGW*HCPTKS Trigger: CGACTTCGTGGGACAATGCCACCAGCCGCCCCACGG...AAGACCCCGAGGGCCAGGACACCGAAACAGAGCGCTTCCTAGCCACCAGCTCCA 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000132523.8 ENSMUST00000147778.9 |
||
| CDS-3UTR CCA 90 bp | GCTGATCCTGGAGGGAGGCTGCACATGCACCTCAGAACCTGCTCCACCAGCATCCCGCCGTGGGGCGGCTaGTGGCATTGTCCCACGAAG | + |
|
Preference number: 4 (lower is better) Translates to: ADPGGRLHMHLRTCSTSIPPWGG*WHCPTK Trigger: CTTCGTGGGACAATGCCACCAGCCGCCCCACGGCGG...GATGCTGGTGGAGCAGGTTCTGAGGTGCATGTGCAGCCTCCCTCCAGGATCAGC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000105369.8 ENSMUST00000147778.9 ENSMUST00000169546.9 ENSMUST00000170219.9 |
||
| CDS-3UTR CCA 90 bp | GGCTCTCGGGGAGGAATGAGACGGGGAGCCTGTGCACATGCAGAGAGCAGGCGCGGCCGGTGGAGCTGGTaGCTAGGAAGCGCTCTGTTT | + |
|
Preference number: 4 (lower is better) Translates to: GSRGGMRRGACAHAESRRGRWSW*LGSALF Trigger: AAACAGAGCGCTTCCTAGCCACCAGCTCCACCGGCC...GCGCCTGCTCTCTGCATGTGCACAGGCTCCCCGTCTCATTCCTCCCCGAGAGCC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000105369.8 ENSMUST00000169546.9 ENSMUST00000170219.9 |
||
| CDS-3UTR CCA 90 bp | GGAGCCTGTGCACATGCAGAGAGCAGGCGCGGTCGGTTATTGCTCAGAGAGGAAAGACTCCGGAGGGGGTaGGAAGGCGGGTGCTGCCCC | + |
|
Preference number: 4 (lower is better) Translates to: GACAHAESRRGRLLLREERLRRG*EGGCCP Trigger: GGGGCAGCACCCGCCTTCCCACCCCCTCCGGAGTCT...TTCCTCTCTGAGCAATAACCGACCGCGCCTGCTCTCTGCATGTGCACAGGCTCC 64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000105369.8 ENSMUST00000169546.9 ENSMUST00000170219.9 |
||
| CDS-3UTR CCA 90 bp | GATCCTGGAGGGAGGCTGCACATGCACCTCAGAACCTGCTCCACCAGCATCTGTAGACTCCGGAGGGGGTaGGAAGGCGGGTGCTGCCCC | + |
|
Preference number: 4 (lower is better) Translates to: DPGGRLHMHLRTCSTSICRLRRG*EGGCCP Trigger: GGGGCAGCACCCGCCTTCCCACCCCCTCCGGAGTCT...ACAGATGCTGGTGGAGCAGGTTCTGAGGTGCATGTGCAGCCTCCCTCCAGGATC 64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000105369.8 ENSMUST00000169546.9 ENSMUST00000170219.9 |
||
| CDS-3UTR CCA 90 bp | CGGGGAGCCTGTGCACATGCAGAGAGCAGGCGCGGTCGGTTATTGCTCAGAGAGGCACAACCCAGAGCCTaGGCAACCACCGCCTCCACC | + |
|
Preference number: 4 (lower is better) Translates to: RGACAHAESRRGRLLLREAQPRA*ATTAST Trigger: GGTGGAGGCGGTGGTTGCCCAGGCTCTGGGTTGTGC...CTCTCTGAGCAATAACCGACCGCGCCTGCTCTCTGCATGTGCACAGGCTCCCCG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000105369.8 ENSMUST00000169546.9 ENSMUST00000170219.9 |
||
| 3UTR CAA 72 bp | GGAGAGAAGAGTCTCTCGTCGAGGCTGGCTGCTAGCTaGTCTAGCAGGGCCCCGGCGGGCTCAACGCACAAC | + |
|
Preference number: 4 (lower is better) Translates to: GEKSLSSRLAAS*SSRAPAGSTHN Trigger: GTTGTGCGTTGAGCCCGCCGGGGCCCTGCTAGACAAGCTAGCAGCCAGCCTCGACGAGAGACTCTTCTCTCC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000147778.9 |
||
| CDS-3UTR TCA 90 bp | GCCAGAGGCTGGGTGCTGGGGTCAACCATATATGGACCGGAGAGTCCAGTCTCGATCGCCGCTGCGCACTaGGTCGCGGTCATTGCCGCT | + |
|
Preference number: 4 (lower is better) Translates to: ARGWVLGSTIYGPESPVSIAAAH*VAVIAA Trigger: AGCGGCAATGACCGCGACTCAGTGCGCAGCGGCGAT...CGAGACTGGACTCTCCGGTCCATATATGGTTGACCCCAGCACCCAGCCTCTGGC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000105369.8 ENSMUST00000169546.9 ENSMUST00000170219.9 |
||
| CDS-3UTR TCA 90 bp | AAGGCGGGTGCTGCCCCTCCACCTCCGGAACCCGAGCCCGAGCTATCGCCGCTGTTAAGGAAACAGAGATaGGTCGGACTCGAACTGCGC | + |
|
Preference number: 4 (lower is better) Translates to: KAGAAPPPPEPEPELSPLLRKQR*VGLELR Trigger: GCGCAGTTCGAGTCCGACTCATCTCTGTTTCCTTAA...CAGCGGCGATAGCTCGGGCTCGGGTTCCGGAGGTGGAGGGGCAGCACCCGCCTT 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000147778.9 |
||
| CDS-3UTR GCA 90 bp | CGGTGGAGCTGGTGGCTAGGAAGCGCTCTGTTTCGGTGTCCTGGCCCTCGGGGTCTGTTGAAGCGCTGGTaGACCTCCCAGCAGCGTTTG | + |
|
Preference number: 4 (lower is better) Translates to: RWSWWLGSALFRCPGPRGLLKRW*TSQQRL Trigger: CAAACGCTGCTGGGAGGTGCACCAGCGCTTCAACAG...ACCCCGAGGGCCAGGACACCGAAACAGAGCGCTTCCTAGCCACCAGCTCCACCG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000132523.8 ENSMUST00000147778.9 |
||
| CDS-3UTR GCA 90 bp | GCGCTAAGTGCCCAGGGGACACTATATGTGCACACTTGGGATTTGGGGGCCGTGGTGGGGTGTGGCCGCTaGACTGGCCTCCCCCGAATC | + |
|
Preference number: 4 (lower is better) Translates to: ALSAQGTLYVHTWDLGAVVGCGR*TGLPRI Trigger: GATTCGGGGGAGGCCAGTGCAGCGGCCACACCCCAC...CACGGCCCCCAAATCCCAAGTGTGCACATATAGTGTCCCCTGGGCACTTAGCGC 63% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt. Matches the following 3 transcripts: ENSMUST00000105369.8 ENSMUST00000169546.9 ENSMUST00000170219.9 |
||
| CDS-3UTR GCA 90 bp | GGCCAGAGGCTGGGTGCTGGGGTCAACCATATATGGACCGGAGAGTCCAGTCTCTCGGCGTCCTGCTCTTaGTGCGGGTCCTGCTGCTGC | + |
|
Preference number: 4 (lower is better) Translates to: GQRLGAGVNHIWTGESSLSASCS*CGSCCC Trigger: GCAGCAGCAGGACCCGCAGCAAGAGCAGGACGCCGA...GAGACTGGACTCTCCGGTCCATATATGGTTGACCCCAGCACCCAGCCTCTGGCC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000105369.8 ENSMUST00000169546.9 ENSMUST00000170219.9 |
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| CDS-3UTR GCA 90 bp | GCTGATCCTGGAGGGAGGCTGCACATGCACCTCAGAACCTGCTCCACCAGCATCTCGGCGTCCTGCTCTTaGTGCGGGTCCTGCTGCTGC | + |
|
Preference number: 4 (lower is better) Translates to: ADPGGRLHMHLRTCSTSISASCS*CGSCCC Trigger: GCAGCAGCAGGACCCGCAGCAAGAGCAGGACGCCGA...GATGCTGGTGGAGCAGGTTCTGAGGTGCATGTGCAGCCTCCCTCCAGGATCAGC 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000105369.8 ENSMUST00000169546.9 ENSMUST00000170219.9 |
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| CDS-3UTR CCA 90 bp | GCTGATCCTGGAGGGAGGCTGCACATGCACCTCAGAACCTGCTCCACCAGCATCCCGTGGGGCGGCTGGTaGCATTGTCCCACGAAGTCG | + |
|
Preference number: 4 (lower is better) Translates to: ADPGGRLHMHLRTCSTSIPWGGW*HCPTKS Trigger: CGACTTCGTGGGACAATGCCACCAGCCGCCCCACGG...GATGCTGGTGGAGCAGGTTCTGAGGTGCATGTGCAGCCTCCCTCCAGGATCAGC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000105369.8 ENSMUST00000147778.9 ENSMUST00000169546.9 ENSMUST00000170219.9 |
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| CDS-3UTR CCA 90 bp | GGGAGGAATGAGACGGGGAGCCTGTGCACATGCAGAGAGCAGGCGCGGTCGGTTGGCCGGTGGAGCTGGTaGCTAGGAAGCGCTCTGTTT | + |
|
Preference number: 4 (lower is better) Translates to: GRNETGSLCTCREQARSVGRWSW*LGSALF Trigger: AAACAGAGCGCTTCCTAGCCACCAGCTCCACCGGCC...AACCGACCGCGCCTGCTCTCTGCATGTGCACAGGCTCCCCGTCTCATTCCTCCC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000105369.8 ENSMUST00000169546.9 ENSMUST00000170219.9 |
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| CDS-3UTR CCA 90 bp | GGAAATCCCCTTCTGTCAGGGTGTACCGGCGGCCCTTGTCCTGAGCCTTGCGGCGGCCGGTGGAGCTGGTaGCTAGGAAGCGCTCTGTTT | + |
|
Preference number: 4 (lower is better) Translates to: GNPLLSGCTGGPCPEPCGGRWSW*LGSALF Trigger: AAACAGAGCGCTTCCTAGCCACCAGCTCCACCGGCC...GCCGCAAGGCTCAGGACAAGGGCCGCCGGTACACCCTGACAGAAGGGGATTTCC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000123967.2 |
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| CDS-3UTR CCA 90 bp | GCCAGAGGCTGGGTGCTGGGGTCAACCATATATGGACCGGAGAGTCCAGTCTCGCAGGCCCAGCAGCCTTaGCACCCCGGGTACCTGCAT | + |
|
Preference number: 4 (lower is better) Translates to: ARGWVLGSTIYGPESPVSQAQQP*HPGYLH Trigger: ATGCAGGTACCCGGGGTGCCAAGGCTGCTGGGCCTG...CGAGACTGGACTCTCCGGTCCATATATGGTTGACCCCAGCACCCAGCCTCTGGC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000105369.8 ENSMUST00000169546.9 ENSMUST00000170219.9 |
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| CDS-3UTR CCA 90 bp | GGCCAGAGGCTGGGTGCTGGGGTCAACCATATATGGACCGGAGAGTCCAGTCTCCAGGCCCAGCAGCCTTaGCACCCCGGGTACCTGCAT | + |
|
Preference number: 4 (lower is better) Translates to: GQRLGAGVNHIWTGESSLQAQQP*HPGYLH Trigger: ATGCAGGTACCCGGGGTGCCAAGGCTGCTGGGCCTG...GAGACTGGACTCTCCGGTCCATATATGGTTGACCCCAGCACCCAGCCTCTGGCC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000105369.8 ENSMUST00000169546.9 ENSMUST00000170219.9 |
||
| CDS-3UTR CCA 90 bp | GGGAGGAATGAGACGGGGAGCCTGTGCACATGCAGAGAGCAGGCGCGGTCGGTTTTGCCGCTGCTGCTGTaGTCCGATGCAGTGGCTGCA | + |
|
Preference number: 4 (lower is better) Translates to: GRNETGSLCTCREQARSVLPLLL*SDAVAA Trigger: TGCAGCCACTGCATCGGACCACAGCAGCAGCGGCAA...AACCGACCGCGCCTGCTCTCTGCATGTGCACAGGCTCCCCGTCTCATTCCTCCC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000105369.8 ENSMUST00000169546.9 ENSMUST00000170219.9 |
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| CDS-3UTR TCA 90 bp | CCAGAGGCTGGGTGCTGGGGTCAACCATATATGGACCGGAGAGTCCAGTCTCGTGCTGCCCGCTGCCGCTaGAAGTGGTGCCTCTTAGGG | + |
|
Preference number: 4 (lower is better) Translates to: PEAGCWGQPYMDRRVQSRAARCR*KWCLLG Trigger: CCCTAAGAGGCACCACTTTCAGCGGCAGCGGGCAGC...ACGAGACTGGACTCTCCGGTCCATATATGGTTGACCCCAGCACCCAGCCTCTGG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000105369.8 ENSMUST00000169546.9 ENSMUST00000170219.9 |
||
| CDS-3UTR GCA 90 bp | GGCCGGTGGAGCTGGTGGCTAGGAAGCGCTCTGTTTCGGTGTCCTGGCCCTCGGAGTGGTGGTCTTCTCTaGTTCCTCCATGGCCCTGTT | + |
|
Preference number: 4 (lower is better) Translates to: GRWSWWLGSALFRCPGPRSGGLL*FLHGPV Trigger: AACAGGGCCATGGAGGAAGCAGAGAAGACCACCACT...CCGAGGGCCAGGACACCGAAACAGAGCGCTTCCTAGCCACCAGCTCCACCGGCC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000132523.8 ENSMUST00000147778.9 |
||
| CDS-3UTR GCA 90 bp | GCTTCCGGAGGCCACTGCGCTAAGTGCCCAGGGGACACTATATGTGCACACTTGACCCGGAGGAGCCTGTaGCCATCTCCCCAGGCACTG | + |
|
Preference number: 4 (lower is better) Translates to: ASGGHCAKCPGDTICAHLTRRSL*PSPQAL Trigger: CAGTGCCTGGGGAGATGGGCACAGGCTCCTCCGGGT...CAAGTGTGCACATATAGTGTCCCCTGGGCACTTAGCGCAGTGGCCTCCGGAAGC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000105369.8 ENSMUST00000169546.9 ENSMUST00000170219.9 |
||
| CDS-3UTR GCA 90 bp | ACGGGGAGCCTGTGCACATGCAGAGAGCAGGCGCGGTCGGTTATTGCTCAGAGAGGGACGTCCCCCTCCTaGTCCATGCTCTCACTGGCT | + |
|
Preference number: 4 (lower is better) Translates to: TGSLCTCREQARSVIAQRGTSPS*SMLSLA Trigger: AGCCAGTGAGAGCATGGAGCAGGAGGGGGACGTCCC...TCTCTGAGCAATAACCGACCGCGCCTGCTCTCTGCATGTGCACAGGCTCCCCGT 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000105369.8 ENSMUST00000169546.9 ENSMUST00000170219.9 |
||
| CDS-3UTR GCA 90 bp | CCTCCAGTAGGTTCGCTCACACAGTGGCAGGCAGTGTTACTGCCTGCCAGTGCTGCGTCCTGCTCTTGCTaGGGGTCCTGCTGCTGCGCA | + |
|
Preference number: 4 (lower is better) Translates to: PPVGSLTQWQAVLLPASAASCSC*GSCCCA Trigger: TGCGCAGCAGCAGGACCCGCAGCAAGAGCAGGACGC...AGCACTGGCAGGCAGTAACACTGCCTGCCACTGTGTGAGCGAACCTACTGGAGG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000105369.8 ENSMUST00000169546.9 ENSMUST00000170219.9 |
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| CDS-3UTR GCA 90 bp | CGGGGAGCCTGTGCACATGCAGAGAGCAGGCGCGGTCGGTTATTGCTCAGAGAGGGTCATTGCCGCTGCTaGTGTGGTCCGATGCAGTGG | + |
|
Preference number: 4 (lower is better) Translates to: RGACAHAESRRGRLLLREGHCRC*CGPMQW Trigger: CCACTGCATCGGACCACAGCAGCAGCGGCAATGACC...CTCTCTGAGCAATAACCGACCGCGCCTGCTCTCTGCATGTGCACAGGCTCCCCG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000105369.8 ENSMUST00000169546.9 ENSMUST00000170219.9 |
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| CDS-3UTR GCA 90 bp | TCAGCTGATCCTGGAGGGAGGCTGCACATGCACCTCAGAACCTGCTCCACCAGCCGCGGTCATTGCCGCTaGTGCTGTGGTCCGATGCAG | + |
|
Preference number: 4 (lower is better) Translates to: SADPGGRLHMHLRTCSTSRGHCR*CCGPMQ Trigger: CTGCATCGGACCACAGCAGCAGCGGCAATGACCGCG...GCTGGTGGAGCAGGTTCTGAGGTGCATGTGCAGCCTCCCTCCAGGATCAGCTGA 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000105369.8 ENSMUST00000169546.9 ENSMUST00000170219.9 |
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| CDS-3UTR GCA 90 bp | GCTGATCCTGGAGGGAGGCTGCACATGCACCTCAGAACCTGCTCCACCAGCATCCCGTCTTCTCGTCGATaGTGTAATCGCGGCGCGGCC | + |
|
Preference number: 4 (lower is better) Translates to: ADPGGRLHMHLRTCSTSIPSSRR*CNRGAA Trigger: GGCCGCGCCGCGATTACAGCATCGACGAGAAGACGG...GATGCTGGTGGAGCAGGTTCTGAGGTGCATGTGCAGCCTCCCTCCAGGATCAGC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000105369.8 ENSMUST00000169546.9 ENSMUST00000170219.9 |
||
| CDS-3UTR GCA 90 bp | ATCCCCTTCTGTCAGGGTGTACCGGCGGCCCTTGTCCTGAGCCTTGCGGCTCTGAGTGGTGGTCTTCTCTaGTTCCTCCATGGCCCGTGG | + |
|
Preference number: 4 (lower is better) Translates to: IPFCQGVPAALVLSLAALSGGLL*FLHGPW Trigger: CCACGGGCCATGGAGGAAGCAGAGAAGACCACCACT...CAGAGCCGCAAGGCTCAGGACAAGGGCCGCCGGTACACCCTGACAGAAGGGGAT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000123967.2 |
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| CDS-3UTR CCA 90 bp | GTGGCCGCTGCACTGGCCTCCCCCGAATCACACTCATGGATAGTAGCGATTTTGCCGCCGTGGGGCGGCTaGTGGCATTGTCCCACGAAG | + |
|
Preference number: 4 (lower is better) Translates to: VAAALASPESHSWIVAILPPWGG*WHCPTK Trigger: CTTCGTGGGACAATGCCACCAGCCGCCCCACGGCGG...CAAAATCGCTACTATCCATGAGTGTGATTCGGGGGAGGCCAGTGCAGCGGCCAC 62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000147778.9 |
||
| CDS-3UTR CCA 90 bp | GCAGGCGCGGTCGGTTATTGCTCAGAGAGGAAAGGTAGAGCGCATACCATGGACCCGCCGTGGGGCGGCTaGTGGCATTGTCCCACGAAG | + |
|
Preference number: 4 (lower is better) Translates to: AGAVGYCSERKGRAHTMDPPWGG*WHCPTK Trigger: CTTCGTGGGACAATGCCACCAGCCGCCCCACGGCGG...GTCCATGGTATGCGCTCTACCTTTCCTCTCTGAGCAATAACCGACCGCGCCTGC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000105369.8 ENSMUST00000147778.9 ENSMUST00000169546.9 ENSMUST00000170219.9 |
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| CDS-3UTR CCA 90 bp | CCAGAGGCTGGGTGCTGGGGTCAACCATATATGGACCGGAGAGTCCAGTCTCGTGAGGTGGTAGCTGGGTaGGGTGTGGCCGCTGCACTG | + |
|
Preference number: 4 (lower is better) Translates to: PEAGCWGQPYMDRRVQSREVVAG*GVAAAL Trigger: CAGTGCAGCGGCCACACCCCACCCAGCTACCACCTC...ACGAGACTGGACTCTCCGGTCCATATATGGTTGACCCCAGCACCCAGCCTCTGG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000105369.8 ENSMUST00000169546.9 ENSMUST00000170219.9 |
||
| CDS-3UTR CCA 90 bp | CCTCCAGTAGGTTCGCTCACACAGTGGCAGGCAGTGTTACTGCCTGCCAGTGCTCAGGCCCAGCAGCCTTaGCACCCCGGGTACCTGCAT | + |
|
Preference number: 4 (lower is better) Translates to: PPVGSLTQWQAVLLPASAQAQQP*HPGYLH Trigger: ATGCAGGTACCCGGGGTGCCAAGGCTGCTGGGCCTG...AGCACTGGCAGGCAGTAACACTGCCTGCCACTGTGTGAGCGAACCTACTGGAGG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000105369.8 ENSMUST00000169546.9 ENSMUST00000170219.9 |
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| CDS-3UTR CCA 90 bp | GGCCAGAGGCTGGGTGCTGGGGTCAACCATATATGGACCGGAGAGTCCAGTCTCTGGCTCCATCCAGGCTaGCATGTCGGCGTAGCCGAG | + |
|
Preference number: 4 (lower is better) Translates to: GQRLGAGVNHIWTGESSLWLHPG*HVGVAE Trigger: CTCGGCTACGCCGACATGCCAGCCTGGATGGAGCCA...GAGACTGGACTCTCCGGTCCATATATGGTTGACCCCAGCACCCAGCCTCTGGCC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000105369.8 ENSMUST00000169546.9 ENSMUST00000170219.9 |
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| CDS-3UTR TCA 90 bp | GATCCTCAGTGCCCCACAGTCACTTCACCTCCAGTAGGTTCGCTCACACAGTGGCCTCCATGGCCCTGTTaGAGCGCTGGTGCACCTCCC | + |
|
Preference number: 4 (lower is better) Translates to: DPQCPTVTSPPVGSLTQWPPWPC*SAGAPP Trigger: GGGAGGTGCACCAGCGCTTCAACAGGGCCATGGAGG...CCACTGTGTGAGCGAACCTACTGGAGGTGAAGTGACTGTGGGGCACTGAGGATC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000105369.8 ENSMUST00000147778.9 ENSMUST00000169546.9 ENSMUST00000170219.9 |
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| CDS-3UTR TCA 90 bp | CATATATGGACCGGAGAGTCCAGTCTCGTCATCCTCCCTGCAGTTGAGCCTGGGCGGCGGCCCTTGTCCTaGGCCTTGCGGCTCTGTTCA | + |
|
Preference number: 4 (lower is better) Translates to: HIWTGESSLVILPAVEPGRRPLS*ALRLCS Trigger: TGAACAGAGCCGCAAGGCTCAGGACAAGGGCCGCCG...CCCAGGCTCAACTGCAGGGAGGATGACGAGACTGGACTCTCCGGTCCATATATG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000105369.8 ENSMUST00000169546.9 ENSMUST00000170219.9 |
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| CDS-3UTR TCA 90 bp | CCTGTGCACATGCAGAGAGCAGGCGCGGTCGGTTATTGCTCAGAGAGGAAAGGTCGGCGGCCCTTGTCCTaGGCCTTGCGGCTCTGTTCA | + |
|
Preference number: 4 (lower is better) Translates to: PVHMQRAGAVGYCSERKGRRPLS*ALRLCS Trigger: TGAACAGAGCCGCAAGGCTCAGGACAAGGGCCGCCG...ACCTTTCCTCTCTGAGCAATAACCGACCGCGCCTGCTCTCTGCATGTGCACAGG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000105369.8 ENSMUST00000169546.9 ENSMUST00000170219.9 |
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| CDS-3UTR TCA 90 bp | GCAGGCGCGGTCGGTTATTGCTCAGAGAGGAAAGGTAGAGCGCATACCATGGACCGGCGGCCCTTGTCCTaGGCCTTGCGGCTCTGTTCA | + |
|
Preference number: 4 (lower is better) Translates to: AGAVGYCSERKGRAHTMDRRPLS*ALRLCS Trigger: TGAACAGAGCCGCAAGGCTCAGGACAAGGGCCGCCG...GTCCATGGTATGCGCTCTACCTTTCCTCTCTGAGCAATAACCGACCGCGCCTGC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000105369.8 ENSMUST00000169546.9 ENSMUST00000170219.9 |
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| CDS-3UTR TCA 90 bp | CATATATGGACCGGAGAGTCCAGTCTCGTCATCCTCCCTGCAGTTGAGCCTGGGGCTGCCCGCTGCCGCTaGAAGTGGTGCCTCTTAGGG | + |
|
Preference number: 4 (lower is better) Translates to: HIWTGESSLVILPAVEPGAARCR*KWCLLG Trigger: CCCTAAGAGGCACCACTTTCAGCGGCAGCGGGCAGC...CCCAGGCTCAACTGCAGGGAGGATGACGAGACTGGACTCTCCGGTCCATATATG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000105369.8 ENSMUST00000169546.9 ENSMUST00000170219.9 |
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| CDS-3UTR TCA 90 bp | CAGGGGGCGGCGGCCCTTGTCCTGAGCCTTGCGGCTCTGTTCAAACAGGGCAGCTTAAGGAAACAGAGATaGGTCGGACTCGAACTGCGC | + |
|
Preference number: 4 (lower is better) Translates to: QGAAALVLSLAALFKQGSLRKQR*VGLELR Trigger: GCGCAGTTCGAGTCCGACTCATCTCTGTTTCCTTAA...GCTGCCCTGTTTGAACAGAGCCGCAAGGCTCAGGACAAGGGCCGCCGCCCCCTG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000132523.8 |
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| CDS-3UTR GCA 90 bp | GGAAACTTGAAGCTGCCACCTGGGCTGTTCTGTCCGTTGTGTCCAAAGCCCAAGGTGGGGTGTGGCCGCTaGACTGGCCTCCCCCGAATC | + |
|
Preference number: 4 (lower is better) Translates to: GNLKLPPGLFCPLCPKPKVGCGR*TGLPRI Trigger: GATTCGGGGGAGGCCAGTGCAGCGGCCACACCCCAC...CTTGGGCTTTGGACACAACGGACAGAACAGCCCAGGTGGCAGCTTCAAGTTTCC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000105369.8 ENSMUST00000169546.9 ENSMUST00000170219.9 |
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| CDS-3UTR GCA 90 bp | GCTGATCCTGGAGGGAGGCTGCACATGCACCTCAGAACCTGCTCCACCAGCATCCATGCTCTCACTGGCTaGCCGCTGCCGCTGAAAGTG | + |
|
Preference number: 4 (lower is better) Translates to: ADPGGRLHMHLRTCSTSIHALTG*PLPLKV Trigger: CACTTTCAGCGGCAGCGGGCAGCCAGTGAGAGCATG...GATGCTGGTGGAGCAGGTTCTGAGGTGCATGTGCAGCCTCCCTCCAGGATCAGC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000105369.8 ENSMUST00000169546.9 ENSMUST00000170219.9 |
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| CDS-3UTR GCA 90 bp | ACGGGGAGCCTGTGCACATGCAGAGAGCAGGCGCGGTCGGTTATTGCTCAGAGACATGCTCTCACTGGCTaGCCGCTGCCGCTGAAAGTG | + |
|
Preference number: 4 (lower is better) Translates to: TGSLCTCREQARSVIAQRHALTG*PLPLKV Trigger: CACTTTCAGCGGCAGCGGGCAGCCAGTGAGAGCATG...TCTCTGAGCAATAACCGACCGCGCCTGCTCTCTGCATGTGCACAGGCTCCCCGT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000105369.8 ENSMUST00000169546.9 ENSMUST00000170219.9 |
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| CDS-3UTR GCA 90 bp | ACGGGGAGCCTGTGCACATGCAGAGAGCAGGCGCGGTCGGTTATTGCTCAGAGAGGTCATTGCCGCTGCTaGTGTGGTCCGATGCAGTGG | + |
|
Preference number: 4 (lower is better) Translates to: TGSLCTCREQARSVIAQRGHCRC*CGPMQW Trigger: CCACTGCATCGGACCACAGCAGCAGCGGCAATGACC...TCTCTGAGCAATAACCGACCGCGCCTGCTCTCTGCATGTGCACAGGCTCCCCGT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000105369.8 ENSMUST00000169546.9 ENSMUST00000170219.9 |
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| CDS-3UTR GCA 90 bp | GGAGCCTGTGCACATGCAGAGAGCAGGCGCGGTCGGTTATTGCTCAGAGAGGAACGCGGTCATTGCCGCTaGTGCTGTGGTCCGATGCAG | + |
|
Preference number: 4 (lower is better) Translates to: GACAHAESRRGRLLLREERGHCR*CCGPMQ Trigger: CTGCATCGGACCACAGCAGCAGCGGCAATGACCGCG...TTCCTCTCTGAGCAATAACCGACCGCGCCTGCTCTCTGCATGTGCACAGGCTCC 61% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000105369.8 ENSMUST00000169546.9 ENSMUST00000170219.9 |
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| CDS-3UTR GCA 90 bp | GCTTCCGGAGGCCACTGCGCTAAGTGCCCAGGGGACACTATATGTGCACACTTGCTGAGTCGCGGTCATTaGCGCTGCTGCTGTGGTCCG | + |
|
Preference number: 4 (lower is better) Translates to: ASGGHCAKCPGDTICAHLLSRGH*RCCCGP Trigger: CGGACCACAGCAGCAGCGGCAATGACCGCGACTCAG...CAAGTGTGCACATATAGTGTCCCCTGGGCACTTAGCGCAGTGGCCTCCGGAAGC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000105369.8 ENSMUST00000169546.9 ENSMUST00000170219.9 |
||
| CDS-3UTR GCA 90 bp | GCGCTAAGTGCCCAGGGGACACTATATGTGCACACTTGGGATTTGGGGGCCGTGCTGAGTCGCGGTCATTaGCGCTGCTGCTGTGGTCCG | + |
|
Preference number: 4 (lower is better) Translates to: ALSAQGTLYVHTWDLGAVLSRGH*RCCCGP Trigger: CGGACCACAGCAGCAGCGGCAATGACCGCGACTCAG...CACGGCCCCCAAATCCCAAGTGTGCACATATAGTGTCCCCTGGGCACTTAGCGC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000105369.8 ENSMUST00000169546.9 ENSMUST00000170219.9 |
||
| CDS-3UTR GCA 90 bp | GGAGCCTGTGCACATGCAGAGAGCAGGCGCGGTCGGTTATTGCTCAGAGAGGAACTCCGCGCCCCTCGATaGTCGCATAGCCACTGTCCA | + |
|
Preference number: 4 (lower is better) Translates to: GACAHAESRRGRLLLREELRAPR*SHSHCP Trigger: TGGACAGTGGCTATGCGAGCATCGAGGGGCGCGGAG...TTCCTCTCTGAGCAATAACCGACCGCGCCTGCTCTCTGCATGTGCACAGGCTCC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000105369.8 ENSMUST00000169546.9 ENSMUST00000170219.9 |
||
| CDS-3UTR CCA 90 bp | CCTGTGCACATGCAGAGAGCAGGCGCGGTCGGTTATTGCTCAGAGAGGAAAGGTCCGTGGGGCGGCTGGTaGCATTGTCCCACGAAGTCG | + |
|
Preference number: 4 (lower is better) Translates to: PVHMQRAGAVGYCSERKGPWGGW*HCPTKS Trigger: CGACTTCGTGGGACAATGCCACCAGCCGCCCCACGG...ACCTTTCCTCTCTGAGCAATAACCGACCGCGCCTGCTCTCTGCATGTGCACAGG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000105369.8 ENSMUST00000147778.9 ENSMUST00000169546.9 ENSMUST00000170219.9 |
||
| CDS-3UTR CCA 90 bp | GTGGCCGCTGCACTGGCCTCCCCCGAATCACACTCATGGATAGTAGCGATTTTGCCGTGGGGCGGCTGGTaGCATTGTCCCACGAAGTCG | + |
|
Preference number: 4 (lower is better) Translates to: VAAALASPESHSWIVAILPWGGW*HCPTKS Trigger: CGACTTCGTGGGACAATGCCACCAGCCGCCCCACGG...CAAAATCGCTACTATCCATGAGTGTGATTCGGGGGAGGCCAGTGCAGCGGCCAC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000123967.2 ENSMUST00000147778.9 |
||
| CDS-3UTR CCA 90 bp | GATCCTGGAGGGAGGCTGCACATGCACCTCAGAACCTGCTCCACCAGCATCTGTGCCCTGTTGAAGCGCTaGTGCACCTCCCAGCAGCGT | + |
|
Preference number: 4 (lower is better) Translates to: DPGGRLHMHLRTCSTSICALLKR*CTSQQR Trigger: ACGCTGCTGGGAGGTGCACCAGCGCTTCAACAGGGC...ACAGATGCTGGTGGAGCAGGTTCTGAGGTGCATGTGCAGCCTCCCTCCAGGATC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000105369.8 ENSMUST00000147778.9 ENSMUST00000169546.9 ENSMUST00000170219.9 |
||
| CDS-3UTR CCA 90 bp | CCTCCAGTAGGTTCGCTCACACAGTGGCAGGCAGTGTTACTGCCTGCCAGTGCTGGCGGTAGGTGGAGGTaGGTGAGGCGGGCATTCTTG | + |
|
Preference number: 4 (lower is better) Translates to: PPVGSLTQWQAVLLPASAGGRWR*VRRAFL Trigger: CAAGAATGCCCGCCTCACCCACCTCCACCTACCGCC...AGCACTGGCAGGCAGTAACACTGCCTGCCACTGTGTGAGCGAACCTACTGGAGG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000105369.8 ENSMUST00000169546.9 ENSMUST00000170219.9 |
||
| CDS-3UTR CCA 90 bp | GATCCTCAGTGCCCCACAGTCACTTCACCTCCAGTAGGTTCGCTCACACAGTGGGAGGTGGTAGCTGGGTaGGGTGTGGCCGCTGCACTG | + |
|
Preference number: 4 (lower is better) Translates to: DPQCPTVTSPPVGSLTQWEVVAG*GVAAAL Trigger: CAGTGCAGCGGCCACACCCCACCCAGCTACCACCTC...CCACTGTGTGAGCGAACCTACTGGAGGTGAAGTGACTGTGGGGCACTGAGGATC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000105369.8 ENSMUST00000169546.9 ENSMUST00000170219.9 |
||
| CDS-3UTR CCA 90 bp | CCAGAGGCTGGGTGCTGGGGTCAACCATATATGGACCGGAGAGTCCAGTCTCGTCTGGGGCCGACTGAGTaGCCGGTGAGGGTTTTCCCA | + |
|
Preference number: 4 (lower is better) Translates to: PEAGCWGQPYMDRRVQSRLGPTE*PVRVFP Trigger: TGGGAAAACCCTCACCGGCCACTCAGTCGGCCCCAG...ACGAGACTGGACTCTCCGGTCCATATATGGTTGACCCCAGCACCCAGCCTCTGG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000105369.8 ENSMUST00000169546.9 ENSMUST00000170219.9 |
||
| CDS-3UTR CCA 90 bp | GGCCGTGTACCCATGCACGGCCACCTCAGGTTGCTCCCGCTGTTGCCACCATTCTGGACGCTCTCTGGCTaGGCTCCAGCTTCCATTTCT | + |
|
Preference number: 4 (lower is better) Translates to: GRVPMHGHLRLLPLLPPFWTLSG*APASIS Trigger: AGAAATGGAAGCTGGAGCCCAGCCAGAGAGCGTCCA...GAATGGTGGCAACAGCGGGAGCAACCTGAGGTGGCCGTGCATGGGTACACGGCC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000105369.8 ENSMUST00000169546.9 ENSMUST00000170219.9 |
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| CDS-3UTR CCA 90 bp | GGCCAGAGGCTGGGTGCTGGGGTCAACCATATATGGACCGGAGAGTCCAGTCTCCTCTCGTGTCCAGACTaGACGCTCTCTGGCTGGGCT | + |
|
Preference number: 4 (lower is better) Translates to: GQRLGAGVNHIWTGESSLLSCPD*TLSGWA Trigger: AGCCCAGCCAGAGAGCGTCCAGTCTGGACACGAGAG...GAGACTGGACTCTCCGGTCCATATATGGTTGACCCCAGCACCCAGCCTCTGGCC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000105369.8 ENSMUST00000169546.9 ENSMUST00000170219.9 |
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| CDS-3UTR CCA 90 bp | GAGCCTCTTGCTTCCGGAGGCCACTGCGCTAAGTGCCCAGGGGACACTATATGTGCTCCATGCTCTCACTaGCTGCCCGCTGCCGCTGAA | + |
|
Preference number: 4 (lower is better) Translates to: EPLASGGHCAKCPGDTICAPCSH*LPAAAE Trigger: TTCAGCGGCAGCGGGCAGCCAGTGAGAGCATGGAGC...ACATATAGTGTCCCCTGGGCACTTAGCGCAGTGGCCTCCGGAAGCAAGAGGCTC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000105369.8 ENSMUST00000169546.9 ENSMUST00000170219.9 |
||
| CDS-3UTR CCA 90 bp | GCCAGAGGCTGGGTGCTGGGGTCAACCATATATGGACCGGAGAGTCCAGTCTCGTTGCCGCTGCTGCTGTaGTCCGATGCAGTGGCTGCA | + |
|
Preference number: 4 (lower is better) Translates to: ARGWVLGSTIYGPESPVSLPLLL*SDAVAA Trigger: TGCAGCCACTGCATCGGACCACAGCAGCAGCGGCAA...CGAGACTGGACTCTCCGGTCCATATATGGTTGACCCCAGCACCCAGCCTCTGGC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000105369.8 ENSMUST00000169546.9 ENSMUST00000170219.9 |
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| CDS-3UTR CCA 90 bp | GATCCTGGAGGGAGGCTGCACATGCACCTCAGAACCTGCTCCACCAGCATCTGTAGGCCTCAAAGCAGGTaGAGACTCCGGAGGGGGTGG | + |
|
Preference number: 4 (lower is better) Translates to: DPGGRLHMHLRTCSTSICRPQSR*RLRRGW Trigger: CCACCCCCTCCGGAGTCTCCACCTGCTTTGAGGCCT...ACAGATGCTGGTGGAGCAGGTTCTGAGGTGCATGTGCAGCCTCCCTCCAGGATC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000105369.8 ENSMUST00000169546.9 ENSMUST00000170219.9 |
||
| CDS-3UTR CCA 90 bp | GCGCTAAGTGCCCAGGGGACACTATATGTGCACACTTGGGATTTGGGGGCCGTGAGGCCTCAAAGCAGGTaGAGACTCCGGAGGGGGTGG | + |
|
Preference number: 4 (lower is better) Translates to: ALSAQGTLYVHTWDLGAVRPQSR*RLRRGW Trigger: CCACCCCCTCCGGAGTCTCCACCTGCTTTGAGGCCT...CACGGCCCCCAAATCCCAAGTGTGCACATATAGTGTCCCCTGGGCACTTAGCGC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 3 transcripts: ENSMUST00000105369.8 ENSMUST00000169546.9 ENSMUST00000170219.9 |
||
| CDS-3UTR CCA 90 bp | GCAGGCGCGGTCGGTTATTGCTCAGAGAGGAAAGGTAGAGCGCATACCATGGACGCACAACCCAGAGCCTaGGCAACCACCGCCTCCACC | + |
|
Preference number: 4 (lower is better) Translates to: AGAVGYCSERKGRAHTMDAQPRA*ATTAST Trigger: GGTGGAGGCGGTGGTTGCCCAGGCTCTGGGTTGTGC...GTCCATGGTATGCGCTCTACCTTTCCTCTCTGAGCAATAACCGACCGCGCCTGC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000105369.8 ENSMUST00000169546.9 ENSMUST00000170219.9 |
||
| CDS-3UTR CCA 90 bp | GGGAGGAATGAGACGGGGAGCCTGTGCACATGCAGAGAGCAGGCGCGGTCGGTTGCGACAATCAGCACCTaGGATGAGGCAACTGGCTCA | + |
|
Preference number: 4 (lower is better) Translates to: GRNETGSLCTCREQARSVATIST*DEATGS Trigger: TGAGCCAGTTGCCTCATCCCAGGTGCTGATTGTCGC...AACCGACCGCGCCTGCTCTCTGCATGTGCACAGGCTCCCCGTCTCATTCCTCCC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000105369.8 ENSMUST00000169546.9 ENSMUST00000170219.9 |
||
| CDS-3UTR CCA 90 bp | TGTGGCCGCTGCACTGGCCTCCCCCGAATCACACTCATGGATAGTAGCGATTTTGGCCCGTGGGGCGGCTaGTGGCATTGTCCCACGAAG | + |
|
Preference number: 4 (lower is better) Translates to: CGRCTGLPRITLMDSSDFGPWGG*WHCPTK Trigger: CTTCGTGGGACAATGCCACCAGCCGCCCCACGGGCC...AAAATCGCTACTATCCATGAGTGTGATTCGGGGGAGGCCAGTGCAGCGGCCACA 61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000123967.2 |
||
| 3UTR CAA 72 bp | ACCGGGGTCGCTGTGCTGCCGTCCTCTCTGTTGCCATaGCTTCCGCGCATGAGTGTGAGGATGTGCACGTGT | + |
|
Preference number: 4 (lower is better) Translates to: TGVAVLPSSLLP*LPRMSVRMCTC Trigger: ACACGTGCACATCCTCACACTCATGCGCGGAAGCAATGGCAACAGAGAGGACGGCAGCACAGCGACCCCGGT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000147778.9 |
||
| CDS-3UTR TCA 90 bp | ACCATATATGGACCGGAGAGTCCAGTCTCGTCATCCTCCCTGCAGTTGAGCCTGCCTCCATGGCCCTGTTaGAGCGCTGGTGCACCTCCC | + |
|
Preference number: 4 (lower is better) Translates to: TIYGPESPVSSSSLQLSLPPWPC*SAGAPP Trigger: GGGAGGTGCACCAGCGCTTCAACAGGGCCATGGAGG...CAGGCTCAACTGCAGGGAGGATGACGAGACTGGACTCTCCGGTCCATATATGGT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000105369.8 ENSMUST00000147778.9 ENSMUST00000169546.9 ENSMUST00000170219.9 |
||
| CDS-3UTR TCA 90 bp | AACTTGAAGCTGCCACCTGGGCTGTTCTGTCCGTTGTGTCCAAAGCCCAAGGCTCCTCCATGGCCCTGTTaGAGCGCTGGTGCACCTCCC | + |
|
Preference number: 4 (lower is better) Translates to: NLKLPPGLFCPLCPKPKAPPWPC*SAGAPP Trigger: GGGAGGTGCACCAGCGCTTCAACAGGGCCATGGAGG...AGCCTTGGGCTTTGGACACAACGGACAGAACAGCCCAGGTGGCAGCTTCAAGTT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000105369.8 ENSMUST00000147778.9 ENSMUST00000169546.9 ENSMUST00000170219.9 |
||
| CDS-3UTR TCA 90 bp | CTAAGTGCCCAGGGGACACTATATGTGCACACTTGGGATTTGGGGGCCGTGTACGGAGCTGGGGCCGACTaGGTGGCCGGTGAGGGTTTT | + |
|
Preference number: 4 (lower is better) Translates to: LSAQGTLYVHTWDLGAVYGAGAD*VAGEGF Trigger: AAAACCCTCACCGGCCACTCAGTCGGCCCCAGCTCC...GTACACGGCCCCCAAATCCCAAGTGTGCACATATAGTGTCCCCTGGGCACTTAG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000105369.8 ENSMUST00000169546.9 ENSMUST00000170219.9 |
||
| CDS-3UTR TCA 90 bp | ACGGGGAGCCTGTGCACATGCAGAGAGCAGGCGCGGTCGGTTATTGCTCAGAGAGCGCTGGCAATGTACTaGATGAAGTCGGCATGGGGG | + |
|
Preference number: 4 (lower is better) Translates to: TGSLCTCREQARSVIAQRALAMY*MKSAWG Trigger: CCCCCATGCCGACTTCATTCAGTACATTGCCAGCGC...TCTCTGAGCAATAACCGACCGCGCCTGCTCTCTGCATGTGCACAGGCTCCCCGT 60% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000105369.8 ENSMUST00000169546.9 ENSMUST00000170219.9 |
||
| CDS-3UTR TCA 90 bp | GGCCAGAGGCTGGGTGCTGGGGTCAACCATATATGGACCGGAGAGTCCAGTCTCGCGCTGGCAATGTACTaGATGAAGTCGGCATGGGGG | + |
|
Preference number: 4 (lower is better) Translates to: GQRLGAGVNHIWTGESSLALAMY*MKSAWG Trigger: CCCCCATGCCGACTTCATTCAGTACATTGCCAGCGC...GAGACTGGACTCTCCGGTCCATATATGGTTGACCCCAGCACCCAGCCTCTGGCC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000105369.8 ENSMUST00000169546.9 ENSMUST00000170219.9 |
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| CDS-3UTR GCA 90 bp | TCAGCTGATCCTGGAGGGAGGCTGCACATGCACCTCAGAACCTGCTCCACCAGCACAGCACCACCAGCGTaGCTCCAACGAACAGCGACA | + |
|
Preference number: 4 (lower is better) Translates to: SADPGGRLHMHLRTCSTSTAPPA*LQRTAT Trigger: TGTCGCTGTTCGTTGGAGGCACGCTGGTGGTGCTGT...GCTGGTGGAGCAGGTTCTGAGGTGCATGTGCAGCCTCCCTCCAGGATCAGCTGA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000105369.8 ENSMUST00000147778.9 ENSMUST00000169546.9 ENSMUST00000170219.9 |
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| CDS-3UTR GCA 90 bp | GGCACTGTTTCAGGCCCAGCAGCCTTGGCACCCCGGGTACCTGCATCTAACGAACCTCCCAGCAGCGTTTaGAGAGCAGAAGAACGCCAG | + |
|
Preference number: 4 (lower is better) Translates to: GTVSGPAALAPRVPASNEPPSSV*RAEERQ Trigger: CTGGCGTTCTTCTGCTCTGCAAACGCTGCTGGGAGG...TTCGTTAGATGCAGGTACCCGGGGTGCCAAGGCTGCTGGGCCTGAAACAGTGCC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000147778.9 |
||
| CDS-3UTR GCA 90 bp | TCAGCTGATCCTGGAGGGAGGCTGCACATGCACCTCAGAACCTGCTCCACCAGCCCTCCCAGCAGCGTTTaGAGAGCAGAAGAACGCCAG | + |
|
Preference number: 4 (lower is better) Translates to: SADPGGRLHMHLRTCSTSPPSSV*RAEERQ Trigger: CTGGCGTTCTTCTGCTCTGCAAACGCTGCTGGGAGG...GCTGGTGGAGCAGGTTCTGAGGTGCATGTGCAGCCTCCCTCCAGGATCAGCTGA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000105369.8 ENSMUST00000147778.9 ENSMUST00000169546.9 ENSMUST00000170219.9 |
||
| CDS-3UTR GCA 90 bp | ACCATATATGGACCGGAGAGTCCAGTCTCGTCATCCTCCCTGCAGTTGAGCCTGACCCGGAGGAGCCTGTaGCCATCTCCCCAGGCACTG | + |
|
Preference number: 4 (lower is better) Translates to: TIYGPESPVSSSSLQLSLTRRSL*PSPQAL Trigger: CAGTGCCTGGGGAGATGGGCACAGGCTCCTCCGGGT...CAGGCTCAACTGCAGGGAGGATGACGAGACTGGACTCTCCGGTCCATATATGGT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000105369.8 ENSMUST00000169546.9 ENSMUST00000170219.9 |
||
| CDS-3UTR GCA 90 bp | GGGAAACTTGAAGCTGCCACCTGGGCTGTTCTGTCCGTTGTGTCCAAAGCCCAAGCGTCCTGCTCTTGCTaGGGGTCCTGCTGCTGCGCA | + |
|
Preference number: 4 (lower is better) Translates to: GKLEAATWAVLSVVSKAQASCSC*GSCCCA Trigger: TGCGCAGCAGCAGGACCCGCAGCAAGAGCAGGACGC...TTGGGCTTTGGACACAACGGACAGAACAGCCCAGGTGGCAGCTTCAAGTTTCCC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000105369.8 ENSMUST00000169546.9 ENSMUST00000170219.9 |
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| CDS-3UTR GCA 90 bp | GATCCTGGAGGGAGGCTGCACATGCACCTCAGAACCTGCTCCACCAGCATCTGTGGTCATTGCCGCTGCTaGTGTGGTCCGATGCAGTGG | + |
|
Preference number: 4 (lower is better) Translates to: DPGGRLHMHLRTCSTSICGHCRC*CGPMQW Trigger: CCACTGCATCGGACCACAGCAGCAGCGGCAATGACC...ACAGATGCTGGTGGAGCAGGTTCTGAGGTGCATGTGCAGCCTCCCTCCAGGATC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000105369.8 ENSMUST00000169546.9 ENSMUST00000170219.9 |
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| CDS-3UTR GCA 90 bp | GCAGGCGCGGTCGGTTATTGCTCAGAGAGGAAAGGTAGAGCGCATACCATGGACCCGAGCTATCGCCGCTaGGCACTGAGTCGCGGTCAT | + |
|
Preference number: 4 (lower is better) Translates to: AGAVGYCSERKGRAHTMDPSYRR*ALSRGH Trigger: ATGACCGCGACTCAGTGCGCAGCGGCGATAGCTCGG...GTCCATGGTATGCGCTCTACCTTTCCTCTCTGAGCAATAACCGACCGCGCCTGC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000105369.8 ENSMUST00000169546.9 ENSMUST00000170219.9 |
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| CDS-3UTR GCA 90 bp | TGCGCTAAGTGCCCAGGGGACACTATATGTGCACACTTGGGATTTGGGGGCCGTCCGAGCTATCGCCGCTaGGCACTGAGTCGCGGTCAT | + |
|
Preference number: 4 (lower is better) Translates to: CAKCPGDTICAHLGFGGRPSYRR*ALSRGH Trigger: ATGACCGCGACTCAGTGCGCAGCGGCGATAGCTCGG...ACGGCCCCCAAATCCCAAGTGTGCACATATAGTGTCCCCTGGGCACTTAGCGCA 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000105369.8 ENSMUST00000169546.9 ENSMUST00000170219.9 |
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| CDS-3UTR GCA 90 bp | CATATATGGACCGGAGAGTCCAGTCTCGTCATCCTCCCTGCAGTTGAGCCTGGGCTCCGCGCCCCTCGATaGTCGCATAGCCACTGTCCA | + |
|
Preference number: 4 (lower is better) Translates to: HIWTGESSLVILPAVEPGLRAPR*SHSHCP Trigger: TGGACAGTGGCTATGCGAGCATCGAGGGGCGCGGAG...CCCAGGCTCAACTGCAGGGAGGATGACGAGACTGGACTCTCCGGTCCATATATG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000105369.8 ENSMUST00000169546.9 ENSMUST00000170219.9 |
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| CDS-3UTR GCA 90 bp | TGCAGAGAGCAGGCGCGGTCGGTTATTGCTCAGAGAGGAAAGGTAGAGCGCATAGGCTGCGGGGAGGACTaGGGGCTGGAGCAGGAAGTT | + |
|
Preference number: 4 (lower is better) Translates to: CREQARSVIAQRGKVERIGCGED*GLEQEV Trigger: AACTTCCTGCTCCAGCCCGCAGTCCTCCCCGCAGCC...TATGCGCTCTACCTTTCCTCTCTGAGCAATAACCGACCGCGCCTGCTCTCTGCA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000105369.8 ENSMUST00000169546.9 ENSMUST00000170219.9 |
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| CDS-3UTR GCA 90 bp | TGCGCTAAGTGCCCAGGGGACACTATATGTGCACACTTGGGATTTGGGGGCCGTCCGTCTTCTCGTCGATaGTGTAATCGCGGCGCGGCC | + |
|
Preference number: 4 (lower is better) Translates to: CAKCPGDTICAHLGFGGRPSSRR*CNRGAA Trigger: GGCCGCGCCGCGATTACAGCATCGACGAGAAGACGG...ACGGCCCCCAAATCCCAAGTGTGCACATATAGTGTCCCCTGGGCACTTAGCGCA 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000105369.8 ENSMUST00000169546.9 ENSMUST00000170219.9 |
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| CDS-3UTR CCA 90 bp | GCAGGCGCGGTCGGTTATTGCTCAGAGAGGAAAGGTAGAGCGCATACCATGGACGCCCTGTTGAAGCGCTaGTGCACCTCCCAGCAGCGT | + |
|
Preference number: 4 (lower is better) Translates to: AGAVGYCSERKGRAHTMDALLKR*CTSQQR Trigger: ACGCTGCTGGGAGGTGCACCAGCGCTTCAACAGGGC...GTCCATGGTATGCGCTCTACCTTTCCTCTCTGAGCAATAACCGACCGCGCCTGC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000105369.8 ENSMUST00000147778.9 ENSMUST00000169546.9 ENSMUST00000170219.9 |
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| CDS-3UTR CCA 90 bp | CCTGTGCACATGCAGAGAGCAGGCGCGGTCGGTTATTGCTCAGAGAGGAAAGGTGCCCTGTTGAAGCGCTaGTGCACCTCCCAGCAGCGT | + |
|
Preference number: 4 (lower is better) Translates to: PVHMQRAGAVGYCSERKGALLKR*CTSQQR Trigger: ACGCTGCTGGGAGGTGCACCAGCGCTTCAACAGGGC...ACCTTTCCTCTCTGAGCAATAACCGACCGCGCCTGCTCTCTGCATGTGCACAGG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000105369.8 ENSMUST00000147778.9 ENSMUST00000169546.9 ENSMUST00000170219.9 |
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| CDS-3UTR CCA 90 bp | CATATATGGACCGGAGAGTCCAGTCTCGTCATCCTCCCTGCAGTTGAGCCTGGGGGCGGTAGGTGGAGGTaGGTGAGGCGGGCATTCTTG | + |
|
Preference number: 4 (lower is better) Translates to: HIWTGESSLVILPAVEPGGGRWR*VRRAFL Trigger: CAAGAATGCCCGCCTCACCCACCTCCACCTACCGCC...CCCAGGCTCAACTGCAGGGAGGATGACGAGACTGGACTCTCCGGTCCATATATG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000105369.8 ENSMUST00000169546.9 ENSMUST00000170219.9 |
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| CDS-3UTR CCA 90 bp | GCAGGCGCGGTCGGTTATTGCTCAGAGAGGAAAGGTAGAGCGCATACCATGGACCTGGGGCCGACTGAGTaGCCGGTGAGGGTTTTCCCA | + |
|
Preference number: 4 (lower is better) Translates to: AGAVGYCSERKGRAHTMDLGPTE*PVRVFP Trigger: TGGGAAAACCCTCACCGGCCACTCAGTCGGCCCCAG...GTCCATGGTATGCGCTCTACCTTTCCTCTCTGAGCAATAACCGACCGCGCCTGC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000105369.8 ENSMUST00000169546.9 ENSMUST00000170219.9 |
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| CDS-3UTR CCA 90 bp | CTTGAAGCTGCCACCTGGGCTGTTCTGTCCGTTGTGTCCAAAGCCCAAGGCTCTTGGCTCCATCCAGGCTaGCATGTCGGCGTAGCCGAG | + |
|
Preference number: 4 (lower is better) Translates to: LEAATWAVLSVVSKAQGSWLHPG*HVGVAE Trigger: CTCGGCTACGCCGACATGCCAGCCTGGATGGAGCCA...AGAGCCTTGGGCTTTGGACACAACGGACAGAACAGCCCAGGTGGCAGCTTCAAG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000105369.8 ENSMUST00000169546.9 ENSMUST00000170219.9 |
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| 3UTR CAA 72 bp | TGCGCTAAGTGCCCAGGGGACACTATATGTGCACACTaGGGATTTGGGGGCCGTGTACCCATGCACGGCCAC | + |
|
Preference number: 4 (lower is better) Translates to: CAKCPGDTICAH*GFGGRVPMHGH Trigger: GTGGCCGTGCATGGGTACACGGCCCCCAAATCCCAAGTGTGCACATATAGTGTCCCCTGGGCACTTAGCGCA 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000105369.8 ENSMUST00000147778.9 ENSMUST00000169546.9 ENSMUST00000170219.9 |
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| CDS-3UTR TCA 90 bp | GGCCAGAGGCTGGGTGCTGGGGTCAACCATATATGGACCGGAGAGTCCAGTCTCTGGAGCAGGAAGTTCTaGAACTTCGTCGCCTGCTCC | + |
|
Preference number: 4 (lower is better) Translates to: GQRLGAGVNHIWTGESSLWSRKF*NFVACS Trigger: GGAGCAGGCGACGAAGTTTCAGAACTTCCTGCTCCA...GAGACTGGACTCTCCGGTCCATATATGGTTGACCCCAGCACCCAGCCTCTGGCC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000105369.8 ENSMUST00000169546.9 ENSMUST00000170219.9 |
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| CDS-3UTR TCA 90 bp | GGAAATCCCCTTCTGTCAGGGTGTACCGGCGGCCCTTGTCCTGAGCCTTGCGGCTTAAGGAAACAGAGATaGGTCGGACTCGAACTGCGC | + |
|
Preference number: 4 (lower is better) Translates to: GNPLLSGCTGGPCPEPCGLRKQR*VGLELR Trigger: GCGCAGTTCGAGTCCGACTCATCTCTGTTTCCTTAA...GCCGCAAGGCTCAGGACAAGGGCCGCCGGTACACCCTGACAGAAGGGGATTTCC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000123967.2 ENSMUST00000147778.9 |
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| CDS-3UTR GCA 90 bp | GAGCCTCTTGCTTCCGGAGGCCACTGCGCTAAGTGCCCAGGGGACACTATATGTACAGCACCACCAGCGTaGCTCCAACGAACAGCGACA | + |
|
Preference number: 4 (lower is better) Translates to: EPLASGGHCAKCPGDTICTAPPA*LQRTAT Trigger: TGTCGCTGTTCGTTGGAGGCACGCTGGTGGTGCTGT...ACATATAGTGTCCCCTGGGCACTTAGCGCAGTGGCCTCCGGAAGCAAGAGGCTC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000105369.8 ENSMUST00000147778.9 ENSMUST00000169546.9 ENSMUST00000170219.9 |
||
| CDS-3UTR GCA 90 bp | GCTTCCGGAGGCCACTGCGCTAAGTGCCCAGGGGACACTATATGTGCACACTTGCCTCCCAGCAGCGTTTaGAGAGCAGAAGAACGCCAG | + |
|
Preference number: 4 (lower is better) Translates to: ASGGHCAKCPGDTICAHLPPSSV*RAEERQ Trigger: CTGGCGTTCTTCTGCTCTGCAAACGCTGCTGGGAGG...CAAGTGTGCACATATAGTGTCCCCTGGGCACTTAGCGCAGTGGCCTCCGGAAGC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000105369.8 ENSMUST00000147778.9 ENSMUST00000169546.9 ENSMUST00000170219.9 |
||
| CDS-3UTR GCA 90 bp | CGGGGAGCCTGTGCACATGCAGAGAGCAGGCGCGGTCGGTTATTGCTCAGAGAGAGTGGTGGTCTTCTCTaGTTCCTCCATGGCCCTGTT | + |
|
Preference number: 4 (lower is better) Translates to: RGACAHAESRRGRLLLRESGGLL*FLHGPV Trigger: AACAGGGCCATGGAGGAAGCAGAGAAGACCACCACT...CTCTCTGAGCAATAACCGACCGCGCCTGCTCTCTGCATGTGCACAGGCTCCCCG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000105369.8 ENSMUST00000147778.9 ENSMUST00000169546.9 ENSMUST00000170219.9 |
||
| CDS-3UTR GCA 90 bp | CGGGGAGCCTGTGCACATGCAGAGAGCAGGCGCGGTCGGTTATTGCTCAGAGAGCTGCATCTAACGAAATaGCCTCCCCAGAGTCACTGG | + |
|
Preference number: 4 (lower is better) Translates to: RGACAHAESRRGRLLLRELHLTK*PPQSHW Trigger: CCAGTGACTCTGGGGAGGGCATTTCGTTAGATGCAG...CTCTCTGAGCAATAACCGACCGCGCCTGCTCTCTGCATGTGCACAGGCTCCCCG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000105369.8 ENSMUST00000169546.9 ENSMUST00000170219.9 |
||
| CDS-3UTR GCA 90 bp | TGCAGAGAGCAGGCGCGGTCGGTTATTGCTCAGAGAGGAAAGGTAGAGCGCATAGGGACGTCCCCCTCCTaGTCCATGCTCTCACTGGCT | + |
|
Preference number: 4 (lower is better) Translates to: CREQARSVIAQRGKVERIGTSPS*SMLSLA Trigger: AGCCAGTGAGAGCATGGAGCAGGAGGGGGACGTCCC...TATGCGCTCTACCTTTCCTCTCTGAGCAATAACCGACCGCGCCTGCTCTCTGCA 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000105369.8 ENSMUST00000169546.9 ENSMUST00000170219.9 |
||
| CDS-3UTR GCA 90 bp | CTAAGTGCCCAGGGGACACTATATGTGCACACTTGGGATTTGGGGGCCGTGTACGGGACGTCCCCCTCCTaGTCCATGCTCTCACTGGCT | + |
|
Preference number: 4 (lower is better) Translates to: LSAQGTLYVHTWDLGAVYGTSPS*SMLSLA Trigger: AGCCAGTGAGAGCATGGAGCAGGAGGGGGACGTCCC...GTACACGGCCCCCAAATCCCAAGTGTGCACATATAGTGTCCCCTGGGCACTTAG 59% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 3 transcripts: ENSMUST00000105369.8 ENSMUST00000169546.9 ENSMUST00000170219.9 |
||
| CDS-3UTR GCA 90 bp | TGCAGAGAGCAGGCGCGGTCGGTTATTGCTCAGAGAGGAAAGGTAGAGCGCATACGCGGTCATTGCCGCTaGTGCTGTGGTCCGATGCAG | + |
|
Preference number: 4 (lower is better) Translates to: CREQARSVIAQRGKVERIRGHCR*CCGPMQ Trigger: CTGCATCGGACCACAGCAGCAGCGGCAATGACCGCG...TATGCGCTCTACCTTTCCTCTCTGAGCAATAACCGACCGCGCCTGCTCTCTGCA 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000105369.8 ENSMUST00000169546.9 ENSMUST00000170219.9 |
||
| CDS-3UTR GCA 90 bp | TGCAGAGAGCAGGCGCGGTCGGTTATTGCTCAGAGAGGAAAGGTAGAGCGCATACTGAGTCGCGGTCATTaGCGCTGCTGCTGTGGTCCG | + |
|
Preference number: 4 (lower is better) Translates to: CREQARSVIAQRGKVERILSRGH*RCCCGP Trigger: CGGACCACAGCAGCAGCGGCAATGACCGCGACTCAG...TATGCGCTCTACCTTTCCTCTCTGAGCAATAACCGACCGCGCCTGCTCTCTGCA 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000105369.8 ENSMUST00000169546.9 ENSMUST00000170219.9 |
||
| CDS-3UTR GCA 90 bp | AACTTGAAGCTGCCACCTGGGCTGTTCTGTCCGTTGTGTCCAAAGCCCAAGGCTCCGAGCTATCGCCGCTaGGCACTGAGTCGCGGTCAT | + |
|
Preference number: 4 (lower is better) Translates to: NLKLPPGLFCPLCPKPKAPSYRR*ALSRGH Trigger: ATGACCGCGACTCAGTGCGCAGCGGCGATAGCTCGG...AGCCTTGGGCTTTGGACACAACGGACAGAACAGCCCAGGTGGCAGCTTCAAGTT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000105369.8 ENSMUST00000169546.9 ENSMUST00000170219.9 |
||
| CDS-3UTR CCA 90 bp | GGGAAACTTGAAGCTGCCACCTGGGCTGTTCTGTCCGTTGTGTCCAAAGCCCAACTGGGGCCGACTGAGTaGCCGGTGAGGGTTTTCCCA | + |
|
Preference number: 4 (lower is better) Translates to: GKLEAATWAVLSVVSKAQLGPTE*PVRVFP Trigger: TGGGAAAACCCTCACCGGCCACTCAGTCGGCCCCAG...TTGGGCTTTGGACACAACGGACAGAACAGCCCAGGTGGCAGCTTCAAGTTTCCC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000105369.8 ENSMUST00000169546.9 ENSMUST00000170219.9 |
||
| CDS-3UTR CCA 90 bp | CATATATGGACCGGAGAGTCCAGTCTCGTCATCCTCCCTGCAGTTGAGCCTGGGCTCTCGTGTCCAGACTaGACGCTCTCTGGCTGGGCT | + |
|
Preference number: 4 (lower is better) Translates to: HIWTGESSLVILPAVEPGLSCPD*TLSGWA Trigger: AGCCCAGCCAGAGAGCGTCCAGTCTGGACACGAGAG...CCCAGGCTCAACTGCAGGGAGGATGACGAGACTGGACTCTCCGGTCCATATATG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000105369.8 ENSMUST00000169546.9 ENSMUST00000170219.9 |
||
| CDS-3UTR CCA 90 bp | ACCATATATGGACCGGAGAGTCCAGTCTCGTCATCCTCCCTGCAGTTGAGCCTGGCTCCATGCTCTCACTaGCTGCCCGCTGCCGCTGAA | + |
|
Preference number: 4 (lower is better) Translates to: TIYGPESPVSSSSLQLSLAPCSH*LPAAAE Trigger: TTCAGCGGCAGCGGGCAGCCAGTGAGAGCATGGAGC...CAGGCTCAACTGCAGGGAGGATGACGAGACTGGACTCTCCGGTCCATATATGGT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000105369.8 ENSMUST00000169546.9 ENSMUST00000170219.9 |
||
| CDS-3UTR CCA 90 bp | GATCCTCAGTGCCCCACAGTCACTTCACCTCCAGTAGGTTCGCTCACACAGTGGTTGCCGCTGCTGCTGTaGTCCGATGCAGTGGCTGCA | + |
|
Preference number: 4 (lower is better) Translates to: DPQCPTVTSPPVGSLTQWLPLLL*SDAVAA Trigger: TGCAGCCACTGCATCGGACCACAGCAGCAGCGGCAA...CCACTGTGTGAGCGAACCTACTGGAGGTGAAGTGACTGTGGGGCACTGAGGATC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000105369.8 ENSMUST00000169546.9 ENSMUST00000170219.9 |
||
| CDS-3UTR CCA 90 bp | GCCAGAGGCTGGGTGCTGGGGTCAACCATATATGGACCGGAGAGTCCAGTCTCGGCGACAATCAGCACCTaGGATGAGGCAACTGGCTCA | + |
|
Preference number: 4 (lower is better) Translates to: ARGWVLGSTIYGPESPVSATIST*DEATGS Trigger: TGAGCCAGTTGCCTCATCCCAGGTGCTGATTGTCGC...CGAGACTGGACTCTCCGGTCCATATATGGTTGACCCCAGCACCCAGCCTCTGGC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000105369.8 ENSMUST00000169546.9 ENSMUST00000170219.9 |
||
| CDS-3UTR TCA 90 bp | TCAGCTGATCCTGGAGGGAGGCTGCACATGCACCTCAGAACCTGCTCCACCAGCCGGGCATTCTTGAGGTaGTGGAAATCCCCTTCTGTC | + |
|
Preference number: 4 (lower is better) Translates to: SADPGGRLHMHLRTCSTSRAFLR*WKSPSV Trigger: GACAGAAGGGGATTTCCATCACCTCAAGAATGCCCG...GCTGGTGGAGCAGGTTCTGAGGTGCATGTGCAGCCTCCCTCCAGGATCAGCTGA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000105369.8 ENSMUST00000169546.9 ENSMUST00000170219.9 |
||
| CDS-3UTR TCA 90 bp | ATCCTGGAGGGAGGCTGCACATGCACCTCAGAACCTGCTCCACCAGCATCTGTGTGGAGCAGGAAGTTCTaGAACTTCGTCGCCTGCTCC | + |
|
Preference number: 4 (lower is better) Translates to: ILEGGCTCTSEPAPPASVWSRKF*NFVACS Trigger: GGAGCAGGCGACGAAGTTTCAGAACTTCCTGCTCCA...CACAGATGCTGGTGGAGCAGGTTCTGAGGTGCATGTGCAGCCTCCCTCCAGGAT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000105369.8 ENSMUST00000169546.9 ENSMUST00000170219.9 |
||
| CDS-3UTR GCA 90 bp | CCTGTGCACATGCAGAGAGCAGGCGCGGTCGGTTATTGCTCAGAGAGGAAAGGTACAGCACCACCAGCGTaGCTCCAACGAACAGCGACA | + |
|
Preference number: 4 (lower is better) Translates to: PVHMQRAGAVGYCSERKGTAPPA*LQRTAT Trigger: TGTCGCTGTTCGTTGGAGGCACGCTGGTGGTGCTGT...ACCTTTCCTCTCTGAGCAATAACCGACCGCGCCTGCTCTCTGCATGTGCACAGG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000105369.8 ENSMUST00000147778.9 ENSMUST00000169546.9 ENSMUST00000170219.9 |
||
| CDS-3UTR GCA 90 bp | CCTGTGCACATGCAGAGAGCAGGCGCGGTCGGTTATTGCTCAGAGAGGAAAGGTCTGTTGAAGCGCTGGTaGACCTCCCAGCAGCGTTTG | + |
|
Preference number: 4 (lower is better) Translates to: PVHMQRAGAVGYCSERKGLLKRW*TSQQRL Trigger: CAAACGCTGCTGGGAGGTGCACCAGCGCTTCAACAG...ACCTTTCCTCTCTGAGCAATAACCGACCGCGCCTGCTCTCTGCATGTGCACAGG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000105369.8 ENSMUST00000147778.9 ENSMUST00000169546.9 ENSMUST00000170219.9 |
||
| CDS-3UTR GCA 90 bp | GATCCTCAGTGCCCCACAGTCACTTCACCTCCAGTAGGTTCGCTCACACAGTGGCTGTTGAAGCGCTGGTaGACCTCCCAGCAGCGTTTG | + |
|
Preference number: 4 (lower is better) Translates to: DPQCPTVTSPPVGSLTQWLLKRW*TSQQRL Trigger: CAAACGCTGCTGGGAGGTGCACCAGCGCTTCAACAG...CCACTGTGTGAGCGAACCTACTGGAGGTGAAGTGACTGTGGGGCACTGAGGATC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000105369.8 ENSMUST00000147778.9 ENSMUST00000169546.9 ENSMUST00000170219.9 |
||
| CDS-3UTR GCA 90 bp | CCTCCAGTAGGTTCGCTCACACAGTGGCAGGCAGTGTTACTGCCTGCCAGTGCTCCTTGTCCTGAGCCTTaGGGCTCTGTTCAAACAGGG | + |
|
Preference number: 4 (lower is better) Translates to: PPVGSLTQWQAVLLPASAPCPEP*GSVQTG Trigger: CCCTGTTTGAACAGAGCCGCAAGGCTCAGGACAAGG...AGCACTGGCAGGCAGTAACACTGCCTGCCACTGTGTGAGCGAACCTACTGGAGG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000105369.8 ENSMUST00000169546.9 ENSMUST00000170219.9 |
||
| CDS-3UTR GCA 90 bp | GCCAGAGGCTGGGTGCTGGGGTCAACCATATATGGACCGGAGAGTCCAGTCTCGCTGCATCTAACGAAATaGCCTCCCCAGAGTCACTGG | + |
|
Preference number: 4 (lower is better) Translates to: ARGWVLGSTIYGPESPVSLHLTK*PPQSHW Trigger: CCAGTGACTCTGGGGAGGGCATTTCGTTAGATGCAG...CGAGACTGGACTCTCCGGTCCATATATGGTTGACCCCAGCACCCAGCCTCTGGC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000105369.8 ENSMUST00000169546.9 ENSMUST00000170219.9 |
||
| CDS-3UTR GCA 90 bp | AACTTGAAGCTGCCACCTGGGCTGTTCTGTCCGTTGTGTCCAAAGCCCAAGGCTCATGCTCTCACTGGCTaGCCGCTGCCGCTGAAAGTG | + |
|
Preference number: 4 (lower is better) Translates to: NLKLPPGLFCPLCPKPKAHALTG*PLPLKV Trigger: CACTTTCAGCGGCAGCGGGCAGCCAGTGAGAGCATG...AGCCTTGGGCTTTGGACACAACGGACAGAACAGCCCAGGTGGCAGCTTCAAGTT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000105369.8 ENSMUST00000169546.9 ENSMUST00000170219.9 |
||
| CDS-3UTR CCA 90 bp | GGGAAACTTGAAGCTGCCACCTGGGCTGTTCTGTCCGTTGTGTCCAAAGCCCAAGGCCGGTGGAGCTGGTaGCTAGGAAGCGCTCTGTTT | + |
|
Preference number: 4 (lower is better) Translates to: GKLEAATWAVLSVVSKAQGRWSW*LGSALF Trigger: AAACAGAGCGCTTCCTAGCCACCAGCTCCACCGGCC...TTGGGCTTTGGACACAACGGACAGAACAGCCCAGGTGGCAGCTTCAAGTTTCCC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000105369.8 ENSMUST00000169546.9 ENSMUST00000170219.9 |
||
| CDS-3UTR CCA 90 bp | CTAAGTGCCCAGGGGACACTATATGTGCACACTTGGGATTTGGGGGCCGTGTACCTCTCGTGTCCAGACTaGACGCTCTCTGGCTGGGCT | + |
|
Preference number: 4 (lower is better) Translates to: LSAQGTLYVHTWDLGAVYLSCPD*TLSGWA Trigger: AGCCCAGCCAGAGAGCGTCCAGTCTGGACACGAGAG...GTACACGGCCCCCAAATCCCAAGTGTGCACATATAGTGTCCCCTGGGCACTTAG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000105369.8 ENSMUST00000169546.9 ENSMUST00000170219.9 |
||
| CDS-3UTR CCA 90 bp | GGCCAGAGGCTGGGTGCTGGGGTCAACCATATATGGACCGGAGAGTCCAGTCTCTGGCGCAGGAACTCATaGAAAAGAGCGTCCGTCTTC | + |
|
Preference number: 4 (lower is better) Translates to: GQRLGAGVNHIWTGESSLWRRNS*KRASVF Trigger: GAAGACGGACGCTCTTTTCCATGAGTTCCTGCGCCA...GAGACTGGACTCTCCGGTCCATATATGGTTGACCCCAGCACCCAGCCTCTGGCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000105369.8 ENSMUST00000169546.9 ENSMUST00000170219.9 |
||
| CDS-3UTR CCA 90 bp | ATCCTGGAGGGAGGCTGCACATGCACCTCAGAACCTGCTCCACCAGCATCTGTGGTCTCTCGTCGAGGCTaGCTGCTAGCTTGTCTAGCA | + |
|
Preference number: 4 (lower is better) Translates to: ILEGGCTCTSEPAPPASVVSRRG*LLACLA Trigger: TGCTAGACAAGCTAGCAGCCAGCCTCGACGAGAGAC...CACAGATGCTGGTGGAGCAGGTTCTGAGGTGCATGTGCAGCCTCCCTCCAGGAT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000105369.8 ENSMUST00000169546.9 ENSMUST00000170219.9 |
||
| CDS-3UTR TCA 90 bp | GCGCTAAGTGCCCAGGGGACACTATATGTGCACACTTGGGATTTGGGGGCCGTGCGGGCATTCTTGAGGTaGTGGAAATCCCCTTCTGTC | + |
|
Preference number: 4 (lower is better) Translates to: ALSAQGTLYVHTWDLGAVRAFLR*WKSPSV Trigger: GACAGAAGGGGATTTCCATCACCTCAAGAATGCCCG...CACGGCCCCCAAATCCCAAGTGTGCACATATAGTGTCCCCTGGGCACTTAGCGC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000105369.8 ENSMUST00000169546.9 ENSMUST00000170219.9 |
||
| CDS-3UTR TCA 90 bp | GGAAACTTGAAGCTGCCACCTGGGCTGTTCTGTCCGTTGTGTCCAAAGCCCAAGGCGCTGGCAATGTACTaGATGAAGTCGGCATGGGGG | + |
|
Preference number: 4 (lower is better) Translates to: GNLKLPPGLFCPLCPKPKALAMY*MKSAWG Trigger: CCCCCATGCCGACTTCATTCAGTACATTGCCAGCGC...CTTGGGCTTTGGACACAACGGACAGAACAGCCCAGGTGGCAGCTTCAAGTTTCC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000105369.8 ENSMUST00000169546.9 ENSMUST00000170219.9 |
||
| CDS-3UTR TCA 90 bp | GAGCCTCTTGCTTCCGGAGGCCACTGCGCTAAGTGCCCAGGGGACACTATATGTGTAAGGAAACAGAGATaGGTCGGACTCGAACTGCGC | + |
|
Preference number: 4 (lower is better) Translates to: EPLASGGHCAKCPGDTICVRKQR*VGLELR Trigger: GCGCAGTTCGAGTCCGACTCATCTCTGTTTCCTTAC...ACATATAGTGTCCCCTGGGCACTTAGCGCAGTGGCCTCCGGAAGCAAGAGGCTC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000169546.9 |
||
| CDS-3UTR GCA 90 bp | GGAAACTTGAAGCTGCCACCTGGGCTGTTCTGTCCGTTGTGTCCAAAGCCCAAGACAGCACCACCAGCGTaGCTCCAACGAACAGCGACA | + |
|
Preference number: 4 (lower is better) Translates to: GNLKLPPGLFCPLCPKPKTAPPA*LQRTAT Trigger: TGTCGCTGTTCGTTGGAGGCACGCTGGTGGTGCTGT...CTTGGGCTTTGGACACAACGGACAGAACAGCCCAGGTGGCAGCTTCAAGTTTCC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000105369.8 ENSMUST00000147778.9 ENSMUST00000169546.9 ENSMUST00000170219.9 |
||
| CDS-3UTR GCA 90 bp | CTAAGTGCCCAGGGGACACTATATGTGCACACTTGGGATTTGGGGGCCGTGTACCCTCCCAGCAGCGTTTaGAGAGCAGAAGAACGCCAG | + |
|
Preference number: 4 (lower is better) Translates to: LSAQGTLYVHTWDLGAVYPPSSV*RAEERQ Trigger: CTGGCGTTCTTCTGCTCTGCAAACGCTGCTGGGAGG...GTACACGGCCCCCAAATCCCAAGTGTGCACATATAGTGTCCCCTGGGCACTTAG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000105369.8 ENSMUST00000147778.9 ENSMUST00000169546.9 ENSMUST00000170219.9 |
||
| CDS-3UTR GCA 90 bp | CTAAGTGCCCAGGGGACACTATATGTGCACACTTGGGATTTGGGGGCCGTGTACCTGTTGAAGCGCTGGTaGACCTCCCAGCAGCGTTTG | + |
|
Preference number: 4 (lower is better) Translates to: LSAQGTLYVHTWDLGAVYLLKRW*TSQQRL Trigger: CAAACGCTGCTGGGAGGTGCACCAGCGCTTCAACAG...GTACACGGCCCCCAAATCCCAAGTGTGCACATATAGTGTCCCCTGGGCACTTAG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000105369.8 ENSMUST00000147778.9 ENSMUST00000169546.9 ENSMUST00000170219.9 |
||
| CDS-3UTR GCA 90 bp | AACTTGAAGCTGCCACCTGGGCTGTTCTGTCCGTTGTGTCCAAAGCCCAAGGCTCTGTTGAAGCGCTGGTaGACCTCCCAGCAGCGTTTG | + |
|
Preference number: 4 (lower is better) Translates to: NLKLPPGLFCPLCPKPKALLKRW*TSQQRL Trigger: CAAACGCTGCTGGGAGGTGCACCAGCGCTTCAACAG...AGCCTTGGGCTTTGGACACAACGGACAGAACAGCCCAGGTGGCAGCTTCAAGTT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000105369.8 ENSMUST00000147778.9 ENSMUST00000169546.9 ENSMUST00000170219.9 |
||
| CDS-3UTR GCA 90 bp | GGAGCCTGTGCACATGCAGAGAGCAGGCGCGGTCGGTTATTGCTCAGAGAGGAAAGCCGAGTGAAGAATTaGAAAACAGTGCCCGACCCG | + |
|
Preference number: 4 (lower is better) Translates to: GACAHAESRRGRLLLREESRVKN*KTVPDP Trigger: CGGGTCGGGCACTGTTTTGCAATTCTTCACTCGGCT...TTCCTCTCTGAGCAATAACCGACCGCGCCTGCTCTCTGCATGTGCACAGGCTCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000105369.8 ENSMUST00000169546.9 ENSMUST00000170219.9 |
||
| CDS-3UTR CCA 90 bp | CTTGAAGCTGCCACCTGGGCTGTTCTGTCCGTTGTGTCCAAAGCCCAAGGCTCTTGGACGCTCTCTGGCTaGGCTCCAGCTTCCATTTCT | + |
|
Preference number: 4 (lower is better) Translates to: LEAATWAVLSVVSKAQGSWTLSG*APASIS Trigger: AGAAATGGAAGCTGGAGCCCAGCCAGAGAGCGTCCA...AGAGCCTTGGGCTTTGGACACAACGGACAGAACAGCCCAGGTGGCAGCTTCAAG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000105369.8 ENSMUST00000169546.9 ENSMUST00000170219.9 |
||
| CDS-3UTR CCA 90 bp | GCGCTAAGTGCCCAGGGGACACTATATGTGCACACTTGGGATTTGGGGGCCGTGTGGCGCAGGAACTCATaGAAAAGAGCGTCCGTCTTC | + |
|
Preference number: 4 (lower is better) Translates to: ALSAQGTLYVHTWDLGAVWRRNS*KRASVF Trigger: GAAGACGGACGCTCTTTTCCATGAGTTCCTGCGCCA...CACGGCCCCCAAATCCCAAGTGTGCACATATAGTGTCCCCTGGGCACTTAGCGC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000105369.8 ENSMUST00000169546.9 ENSMUST00000170219.9 |
||
| CDS-3UTR CCA 90 bp | GCGCTAAGTGCCCAGGGGACACTATATGTGCACACTTGGGATTTGGGGGCCGTGGATGACAGGAATGGATaGGTCATCACCCGTGATGGG | + |
|
Preference number: 4 (lower is better) Translates to: ALSAQGTLYVHTWDLGAVDDRNG*VITRDG Trigger: CCCATCACGGGTGATGACCCATCCATTCCTGTCATC...CACGGCCCCCAAATCCCAAGTGTGCACATATAGTGTCCCCTGGGCACTTAGCGC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000105369.8 ENSMUST00000169546.9 ENSMUST00000170219.9 |
||
| CDS-3UTR CCA 90 bp | GCAGGCGCGGTCGGTTATTGCTCAGAGAGGAAAGGTAGAGCGCATACCATGGACGTCTCTCGTCGAGGCTaGCTGCTAGCTTGTCTAGCA | + |
|
Preference number: 4 (lower is better) Translates to: AGAVGYCSERKGRAHTMDVSRRG*LLACLA Trigger: TGCTAGACAAGCTAGCAGCCAGCCTCGACGAGAGAC...GTCCATGGTATGCGCTCTACCTTTCCTCTCTGAGCAATAACCGACCGCGCCTGC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000105369.8 ENSMUST00000169546.9 ENSMUST00000170219.9 |
||
| CDS-3UTR GCA 90 bp | TGCGCTAAGTGCCCAGGGGACACTATATGTGCACACTTGGGATTTGGGGGCCGTAGTGGTGGTCTTCTCTaGTTCCTCCATGGCCCTGTT | + |
|
Preference number: 4 (lower is better) Translates to: CAKCPGDTICAHLGFGGRSGGLL*FLHGPV Trigger: AACAGGGCCATGGAGGAAGCAGAGAAGACCACCACT...ACGGCCCCCAAATCCCAAGTGTGCACATATAGTGTCCCCTGGGCACTTAGCGCA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000105369.8 ENSMUST00000147778.9 ENSMUST00000169546.9 ENSMUST00000170219.9 |
||
| CDS-3UTR GCA 90 bp | ACCATATATGGACCGGAGAGTCCAGTCTCGTCATCCTCCCTGCAGTTGAGCCTGCCTTGTCCTGAGCCTTaGGGCTCTGTTCAAACAGGG | + |
|
Preference number: 4 (lower is better) Translates to: TIYGPESPVSSSSLQLSLPCPEP*GSVQTG Trigger: CCCTGTTTGAACAGAGCCGCAAGGCTCAGGACAAGG...CAGGCTCAACTGCAGGGAGGATGACGAGACTGGACTCTCCGGTCCATATATGGT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000105369.8 ENSMUST00000169546.9 ENSMUST00000170219.9 |
||
| CDS-3UTR GCA 90 bp | TGCGCTAAGTGCCCAGGGGACACTATATGTGCACACTTGGGATTTGGGGGCCGTCTGCATCTAACGAAATaGCCTCCCCAGAGTCACTGG | + |
|
Preference number: 4 (lower is better) Translates to: CAKCPGDTICAHLGFGGRLHLTK*PPQSHW Trigger: CCAGTGACTCTGGGGAGGGCATTTCGTTAGATGCAG...ACGGCCCCCAAATCCCAAGTGTGCACATATAGTGTCCCCTGGGCACTTAGCGCA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000105369.8 ENSMUST00000169546.9 ENSMUST00000170219.9 |
||
| CDS-3UTR GCA 90 bp | CCTGTGCACATGCAGAGAGCAGGCGCGGTCGGTTATTGCTCAGAGAGGAAAGGTAGCCGAGTGAAGAATTaGAAAACAGTGCCCGACCCG | + |
|
Preference number: 4 (lower is better) Translates to: PVHMQRAGAVGYCSERKGSRVKN*KTVPDP Trigger: CGGGTCGGGCACTGTTTTGCAATTCTTCACTCGGCT...ACCTTTCCTCTCTGAGCAATAACCGACCGCGCCTGCTCTCTGCATGTGCACAGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000105369.8 ENSMUST00000169546.9 ENSMUST00000170219.9 |
||
| CDS-3UTR CCA 90 bp | GGGAAACTTGAAGCTGCCACCTGGGCTGTTCTGTCCGTTGTGTCCAAAGCCCAAGTCTCTCGTCGAGGCTaGCTGCTAGCTTGTCTAGCA | + |
|
Preference number: 4 (lower is better) Translates to: GKLEAATWAVLSVVSKAQVSRRG*LLACLA Trigger: TGCTAGACAAGCTAGCAGCCAGCCTCGACGAGAGAC...TTGGGCTTTGGACACAACGGACAGAACAGCCCAGGTGGCAGCTTCAAGTTTCCC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000105369.8 ENSMUST00000169546.9 ENSMUST00000170219.9 |
||
| CDS-3UTR CCA 90 bp | ACCATATATGGACCGGAGAGTCCAGTCTCGTCATCCTCCCTGCAGTTGAGCCTGGCGACAATCAGCACCTaGGATGAGGCAACTGGCTCA | + |
|
Preference number: 4 (lower is better) Translates to: TIYGPESPVSSSSLQLSLATIST*DEATGS Trigger: TGAGCCAGTTGCCTCATCCCAGGTGCTGATTGTCGC...CAGGCTCAACTGCAGGGAGGATGACGAGACTGGACTCTCCGGTCCATATATGGT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000105369.8 ENSMUST00000169546.9 ENSMUST00000170219.9 |
||
| CDS-3UTR TCA 90 bp | CTAAGTGCCCAGGGGACACTATATGTGCACACTTGGGATTTGGGGGCCGTGTACCGGGCATTCTTGAGGTaGTGGAAATCCCCTTCTGTC | + |
|
Preference number: 4 (lower is better) Translates to: LSAQGTLYVHTWDLGAVYRAFLR*WKSPSV Trigger: GACAGAAGGGGATTTCCATCACCTCAAGAATGCCCG...GTACACGGCCCCCAAATCCCAAGTGTGCACATATAGTGTCCCCTGGGCACTTAG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000105369.8 ENSMUST00000169546.9 ENSMUST00000170219.9 |
||
| CDS-3UTR TCA 90 bp | GGTTATTGCTCAGAGAGGAAAGGTAGAGCGCATACCATGGACAGGGTAAATCAAATCGCCGCTGCGCACTaGGTCGCGGTCATTGCCGCT | + |
|
Preference number: 4 (lower is better) Translates to: GYCSERKGRAHTMDRVNQIAAAH*VAVIAA Trigger: AGCGGCAATGACCGCGACTCAGTGCGCAGCGGCGAT...TTGATTTACCCTGTCCATGGTATGCGCTCTACCTTTCCTCTCTGAGCAATAACC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000105369.8 ENSMUST00000169546.9 ENSMUST00000170219.9 |
||
| CDS-3UTR GCA 90 bp | TGTGGCCGCTGCACTGGCCTCCCCCGAATCACACTCATGGATAGTAGCGATTTTAGTGGTGGTCTTCTCTaGTTCCTCCATGGCCCTGTT | + |
|
Preference number: 4 (lower is better) Translates to: CGRCTGLPRITLMDSSDFSGGLL*FLHGPV Trigger: AACAGGGCCATGGAGGAAGCAGAGAAGACCACCACT...AAAATCGCTACTATCCATGAGTGTGATTCGGGGGAGGCCAGTGCAGCGGCCACA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000147778.9 |
||
| CDS-3UTR GCA 90 bp | AACTTGAAGCTGCCACCTGGGCTGTTCTGTCCGTTGTGTCCAAAGCCCAAGGCTAGTGGTGGTCTTCTCTaGTTCCTCCATGGCCCTGTT | + |
|
Preference number: 4 (lower is better) Translates to: NLKLPPGLFCPLCPKPKASGGLL*FLHGPV Trigger: AACAGGGCCATGGAGGAAGCAGAGAAGACCACCACT...AGCCTTGGGCTTTGGACACAACGGACAGAACAGCCCAGGTGGCAGCTTCAAGTT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000105369.8 ENSMUST00000147778.9 ENSMUST00000169546.9 ENSMUST00000170219.9 |
||
| CDS-3UTR GCA 90 bp | GGTTATTGCTCAGAGAGGAAAGGTAGAGCGCATACCATGGACAGGGTAAATCAAGGCTGCGGGGAGGACTaGGGGCTGGAGCAGGAAGTT | + |
|
Preference number: 4 (lower is better) Translates to: GYCSERKGRAHTMDRVNQGCGED*GLEQEV Trigger: AACTTCCTGCTCCAGCCCGCAGTCCTCCCCGCAGCC...TTGATTTACCCTGTCCATGGTATGCGCTCTACCTTTCCTCTCTGAGCAATAACC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000105369.8 ENSMUST00000169546.9 ENSMUST00000170219.9 |
||
| CDS-3UTR CCA 90 bp | AGTGGGCAGGCACTCACAGCGAGTCTGCCCTATCTTTTGGCAATAAATAAAGCTGGCGGTAGGTGGAGGTaGGTGAGGCGGGCATTCTTG | + |
|
Preference number: 4 (lower is better) Translates to: SGQALTASLPYLLAINKAGGRWR*VRRAFL Trigger: CAAGAATGCCCGCCTCACCCACCTCCACCTACCGCC...AGCTTTATTTATTGCCAAAAGATAGGGCAGACTCGCTGTGAGTGCCTGCCCACT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000105369.8 ENSMUST00000169546.9 ENSMUST00000170219.9 |
||
| CDS-3UTR CCA 90 bp | GGAAACTTGAAGCTGCCACCTGGGCTGTTCTGTCCGTTGTGTCCAAAGCCCAAGGATGACAGGAATGGATaGGTCATCACCCGTGATGGG | + |
|
Preference number: 4 (lower is better) Translates to: GNLKLPPGLFCPLCPKPKDDRNG*VITRDG Trigger: CCCATCACGGGTGATGACCCATCCATTCCTGTCATC...CTTGGGCTTTGGACACAACGGACAGAACAGCCCAGGTGGCAGCTTCAAGTTTCC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000105369.8 ENSMUST00000169546.9 ENSMUST00000170219.9 |
||
| CDS-3UTR CCA 90 bp | TGCAGAGAGCAGGCGCGGTCGGTTATTGCTCAGAGAGGAAAGGTAGAGCGCATAGATGACAGGAATGGATaGGTCATCACCCGTGATGGG | + |
|
Preference number: 4 (lower is better) Translates to: CREQARSVIAQRGKVERIDDRNG*VITRDG Trigger: CCCATCACGGGTGATGACCCATCCATTCCTGTCATC...TATGCGCTCTACCTTTCCTCTCTGAGCAATAACCGACCGCGCCTGCTCTCTGCA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000105369.8 ENSMUST00000169546.9 ENSMUST00000170219.9 |
||
| CDS-3UTR CCA 90 bp | GGTTATTGCTCAGAGAGGAAAGGTAGAGCGCATACCATGGACAGGGTAAATCAAGCACAACCCAGAGCCTaGGCAACCACCGCCTCCACC | + |
|
Preference number: 4 (lower is better) Translates to: GYCSERKGRAHTMDRVNQAQPRA*ATTAST Trigger: GGTGGAGGCGGTGGTTGCCCAGGCTCTGGGTTGTGC...TTGATTTACCCTGTCCATGGTATGCGCTCTACCTTTCCTCTCTGAGCAATAACC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000105369.8 ENSMUST00000169546.9 ENSMUST00000170219.9 |
||
| CDS-3UTR TCA 90 bp | GGTTATTGCTCAGAGAGGAAAGGTAGAGCGCATACCATGGACAGGGTAAATCAATGGAGCAGGAAGTTCTaGAACTTCGTCGCCTGCTCC | + |
|
Preference number: 4 (lower is better) Translates to: GYCSERKGRAHTMDRVNQWSRKF*NFVACS Trigger: GGAGCAGGCGACGAAGTTTCAGAACTTCCTGCTCCA...TTGATTTACCCTGTCCATGGTATGCGCTCTACCTTTCCTCTCTGAGCAATAACC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000105369.8 ENSMUST00000169546.9 ENSMUST00000170219.9 |
||
| CDS-3UTR GCA 90 bp | AAACCCAGAGCAAACAAATATGCAGAGACATTTATGATTAACCAGACAACACGAGCGTCCTGCTCTTGCTaGGGGTCCTGCTGCTGCGCA | + |
|
Preference number: 4 (lower is better) Translates to: KPRANKYAETFMINQTTRASCSC*GSCCCA Trigger: TGCGCAGCAGCAGGACCCGCAGCAAGAGCAGGACGC...TCGTGTTGTCTGGTTAATCATAAATGTCTCTGCATATTTGTTTGCTCTGGGTTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000169546.9 ENSMUST00000170219.9 |
||
| CDS-3UTR CCA 90 bp | AAACCCAGAGCAAACAAATATGCAGAGACATTTATGATTAACCAGACAACACGAGCTCCATGCTCTCACTaGCTGCCCGCTGCCGCTGAA | + |
|
Preference number: 4 (lower is better) Translates to: KPRANKYAETFMINQTTRAPCSH*LPAAAE Trigger: TTCAGCGGCAGCGGGCAGCCAGTGAGAGCATGGAGC...TCGTGTTGTCTGGTTAATCATAAATGTCTCTGCATATTTGTTTGCTCTGGGTTT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000169546.9 ENSMUST00000170219.9 |
||
| CDS-3UTR CCA 90 bp | ATAAAACAGGTGGATTTGAGCTATGGCTATGAGGGTGTTTGGAAATATGGAGCATGGCGCAGGAACTCATaGAAAAGAGCGTCCGTCTTC | + |
|
Preference number: 4 (lower is better) Translates to: IKQVDLSYGYEGVWKYGAWRRNS*KRASVF Trigger: GAAGACGGACGCTCTTTTCCATGAGTTCCTGCGCCA...TGCTCCATATTTCCAAACACCCTCATAGCCATAGCTCAAATCCACCTGTTTTAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000169546.9 ENSMUST00000170219.9 |
||
| CDS-3UTR CCA 90 bp | AAACCCAGAGCAAACAAATATGCAGAGACATTTATGATTAACCAGACAACACGATGGACGCTCTCTGGCTaGGCTCCAGCTTCCATTTCT | + |
|
Preference number: 4 (lower is better) Translates to: KPRANKYAETFMINQTTRWTLSG*APASIS Trigger: AGAAATGGAAGCTGGAGCCCAGCCAGAGAGCGTCCA...TCGTGTTGTCTGGTTAATCATAAATGTCTCTGCATATTTGTTTGCTCTGGGTTT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000169546.9 ENSMUST00000170219.9 |
||
| CDS-3UTR GCA 90 bp | AAACCCAGAGCAAACAAATATGCAGAGACATTTATGATTAACCAGACAACACGAAGCCGAGTGAAGAATTaGAAAACAGTGCCCGACCCG | + |
|
Preference number: 4 (lower is better) Translates to: KPRANKYAETFMINQTTRSRVKN*KTVPDP Trigger: CGGGTCGGGCACTGTTTTGCAATTCTTCACTCGGCT...TCGTGTTGTCTGGTTAATCATAAATGTCTCTGCATATTTGTTTGCTCTGGGTTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000169546.9 ENSMUST00000170219.9 |
||
| CDS-3UTR CAA 90 bp | ACGGGGAGCCTGTGCACATGCAGAGAGCAGGCGCGGTCGGTTATTGCTCAGAGAAGGCTGGCTGCTAGCTaGTCTAGCAGGGCCCCGGCG | + |
|
Preference number: 5 (lower is better) Translates to: TGSLCTCREQARSVIAQRRLAAS*SSRAPA Trigger: CGCCGGGGCCCTGCTAGACAAGCTAGCAGCCAGCCT...TCTCTGAGCAATAACCGACCGCGCCTGCTCTCTGCATGTGCACAGGCTCCCCGT 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000105369.8 ENSMUST00000169546.9 ENSMUST00000170219.9 |
||
| CDS-3UTR CAA 90 bp | TTCAAACAGGGCAGCCTCGTTGAAGGACACGCGGCGGCCGGTGGAGCTGGTGGCACCTCCCAGCAGCGTTaGCAGAGCAGAAGAACGCCA | + |
|
Preference number: 5 (lower is better) Translates to: FKQGSLVEGHAAAGGAGGTSQQR*QSRRTP Trigger: TGGCGTTCTTCTGCTCTGCAAACGCTGCTGGGAGGT...GCCACCAGCTCCACCGGCCGCCGCGTGTCCTTCAACGAGGCTGCCCTGTTTGAA 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000132523.8 ENSMUST00000147778.9 |
||
| CDS-3UTR CAA 90 bp | GATCCTGGAGGGAGGCTGCACATGCACCTCAGAACCTGCTCCACCAGCATCTGTAACAGGGCAGCCTCGTaGAAGGACACGCGGCGGCCG | + |
|
Preference number: 5 (lower is better) Translates to: DPGGRLHMHLRTCSTSICNRAAS*KDTRRP Trigger: CGGCCGCCGCGTGTCCTTCAACGAGGCTGCCCTGTT...ACAGATGCTGGTGGAGCAGGTTCTGAGGTGCATGTGCAGCCTCCCTCCAGGATC 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000105369.8 ENSMUST00000169546.9 ENSMUST00000170219.9 |
||
| CDS-3UTR CAA 90 bp | CACTCATGGATAGTAGCGATTTTGAGGGGCGGTAGGTGGAGGTGGGTGAGGCGGAACAGGGCAGCCTCGTaGAAGGACACGCGGCGGCCG | + |
|
Preference number: 5 (lower is better) Translates to: HSWIVAILRGGRWRWVRRNRAAS*KDTRRP Trigger: CGGCCGCCGCGTGTCCTTCAACGAGGCTGCCCTGTT...CCGCCTCACCCACCTCCACCTACCGCCCCTCAAAATCGCTACTATCCATGAGTG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000123967.2 |
||
| CDS-3UTR CAA 90 bp | GAGCCTCTTGCTTCCGGAGGCCACTGCGCTAAGTGCCCAGGGGACACTATATGTAGGCTGGCTGCTAGCTaGTCTAGCAGGGCCCCGGCG | + |
|
Preference number: 5 (lower is better) Translates to: EPLASGGHCAKCPGDTICRLAAS*SSRAPA Trigger: CGCCGGGGCCCTGCTAGACAAGCTAGCAGCCAGCCT...ACATATAGTGTCCCCTGGGCACTTAGCGCAGTGGCCTCCGGAAGCAAGAGGCTC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000105369.8 ENSMUST00000169546.9 ENSMUST00000170219.9 |
||
| CDS-3UTR CAA 90 bp | TGCGCTAAGTGCCCAGGGGACACTATATGTGCACACTTGGGATTTGGGGGCCGTAGGCTGGCTGCTAGCTaGTCTAGCAGGGCCCCGGCG | + |
|
Preference number: 5 (lower is better) Translates to: CAKCPGDTICAHLGFGGRRLAAS*SSRAPA Trigger: CGCCGGGGCCCTGCTAGACAAGCTAGCAGCCAGCCT...ACGGCCCCCAAATCCCAAGTGTGCACATATAGTGTCCCCTGGGCACTTAGCGCA 62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000105369.8 ENSMUST00000169546.9 ENSMUST00000170219.9 |
||
| CDS-3UTR CAA 90 bp | ACCATATATGGACCGGAGAGTCCAGTCTCGTCATCCTCCCTGCAGTTGAGCCTGAACAGGGCAGCCTCGTaGAAGGACACGCGGCGGCCG | + |
|
Preference number: 5 (lower is better) Translates to: TIYGPESPVSSSSLQLSLNRAAS*KDTRRP Trigger: CGGCCGCCGCGTGTCCTTCAACGAGGCTGCCCTGTT...CAGGCTCAACTGCAGGGAGGATGACGAGACTGGACTCTCCGGTCCATATATGGT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000105369.8 ENSMUST00000169546.9 ENSMUST00000170219.9 |
||
| CDS-3UTR CAA 90 bp | GCCAGAGGCTGGGTGCTGGGGTCAACCATATATGGACCGGAGAGTCCAGTCTCGACCTCCCAGCAGCGTTaGCAGAGCAGAAGAACGCCA | + |
|
Preference number: 5 (lower is better) Translates to: ARGWVLGSTIYGPESPVSTSQQR*QSRRTP Trigger: TGGCGTTCTTCTGCTCTGCAAACGCTGCTGGGAGGT...CGAGACTGGACTCTCCGGTCCATATATGGTTGACCCCAGCACCCAGCCTCTGGC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000105369.8 ENSMUST00000147778.9 ENSMUST00000169546.9 ENSMUST00000170219.9 |
||
| CDS-3UTR CAA 90 bp | ATCCTGGAGGGAGGCTGCACATGCACCTCAGAACCTGCTCCACCAGCATCTGTGACCTCCCAGCAGCGTTaGCAGAGCAGAAGAACGCCA | + |
|
Preference number: 5 (lower is better) Translates to: ILEGGCTCTSEPAPPASVTSQQR*QSRRTP Trigger: TGGCGTTCTTCTGCTCTGCAAACGCTGCTGGGAGGT...CACAGATGCTGGTGGAGCAGGTTCTGAGGTGCATGTGCAGCCTCCCTCCAGGAT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000105369.8 ENSMUST00000147778.9 ENSMUST00000169546.9 ENSMUST00000170219.9 |
||
| CDS-3UTR CAA 90 bp | GCTTCCGGAGGCCACTGCGCTAAGTGCCCAGGGGACACTATATGTGCACACTTGACCTCCCAGCAGCGTTaGCAGAGCAGAAGAACGCCA | + |
|
Preference number: 5 (lower is better) Translates to: ASGGHCAKCPGDTICAHLTSQQR*QSRRTP Trigger: TGGCGTTCTTCTGCTCTGCAAACGCTGCTGGGAGGT...CAAGTGTGCACATATAGTGTCCCCTGGGCACTTAGCGCAGTGGCCTCCGGAAGC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000105369.8 ENSMUST00000147778.9 ENSMUST00000169546.9 ENSMUST00000170219.9 |
||
| CDS-3UTR CAA 90 bp | CAGGTGGATTTGAGCTATGGCTATGAGGGTGTTTGGAAATATGGAGCAGGCGGGAACAGGGCAGCCTCGTaGAAGGACACGCGGCGGCCG | + |
|
Preference number: 5 (lower is better) Translates to: QVDLSYGYEGVWKYGAGGNRAAS*KDTRRP Trigger: CGGCCGCCGCGTGTCCTTCAACGAGGCTGCCCTGTT...CCCGCCTGCTCCATATTTCCAAACACCCTCATAGCCATAGCTCAAATCCACCTG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000169546.9 ENSMUST00000170219.9 |
||
| CDS-3UTR CAA 90 bp | GGAGCCTGTGCACATGCAGAGAGCAGGCGCGGTCGGTTATTGCTCAGAGAGGAAATAGCCAAGCTGTCCTaGGAGGTGGTAGCTGGGTGG | + |
|
Preference number: 5 (lower is better) Translates to: GACAHAESRRGRLLLREEIAKLS*EVVAGW Trigger: CCACCCAGCTACCACCTCCAAGGACAGCTTGGCTAT...TTCCTCTCTGAGCAATAACCGACCGCGCCTGCTCTCTGCATGTGCACAGGCTCC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000105369.8 ENSMUST00000169546.9 ENSMUST00000170219.9 |
||
| CDS-3UTR CAA 90 bp | AACTTGAAGCTGCCACCTGGGCTGTTCTGTCCGTTGTGTCCAAAGCCCAAGGCTACTGAGTCGCGGTCATaGCCGCTGCTGCTGTGGTCC | + |
|
Preference number: 5 (lower is better) Translates to: NLKLPPGLFCPLCPKPKATESRS*PLLLWS Trigger: GGACCACAGCAGCAGCGGCAATGACCGCGACTCAGT...AGCCTTGGGCTTTGGACACAACGGACAGAACAGCCCAGGTGGCAGCTTCAAGTT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000105369.8 ENSMUST00000169546.9 ENSMUST00000170219.9 |
||
| CDS-3UTR CAA 90 bp | GGAAACTTGAAGCTGCCACCTGGGCTGTTCTGTCCGTTGTGTCCAAAGCCCAAGACTGAGTCGCGGTCATaGCCGCTGCTGCTGTGGTCC | + |
|
Preference number: 5 (lower is better) Translates to: GNLKLPPGLFCPLCPKPKTESRS*PLLLWS Trigger: GGACCACAGCAGCAGCGGCAATGACCGCGACTCAGT...CTTGGGCTTTGGACACAACGGACAGAACAGCCCAGGTGGCAGCTTCAAGTTTCC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000105369.8 ENSMUST00000169546.9 ENSMUST00000170219.9 |
||
| CDS GCA 90 bp | AGCAGCGTTTGCAGAGCAGAAGAACGCCAGACAGCACCACCAGCGTaGCTCCAACGAACAGCGACATCACCACCACCAGCAGCACATAGT | + |
|
Preference number: 5 (lower is better) Translates to: SSVCRAEERQTAPPA*LQRTATSPPPAAHS Trigger: ACTATGTGCTGCTGGTGGTGGTGATGTCGCTGTTCGTTGGAGGCACGCTGGTGGTGCTGTCTGGCGTTCTTCTGCTCTGCAAACGCTGCT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000105369.8 ENSMUST00000132523.8 ENSMUST00000147778.9 ENSMUST00000169546.9 ENSMUST00000170219.9 |
||
| CDS-3UTR CAA 90 bp | TGCAGAGAGCAGGCGCGGTCGGTTATTGCTCAGAGAGGAAAGGTAGAGCGCATACTGCCGTCCTCTCTGTaGCCATTGCTTCCGCGCATG | + |
|
Preference number: 5 (lower is better) Translates to: CREQARSVIAQRGKVERILPSSL*PLLPRM Trigger: CATGCGCGGAAGCAATGGCAACAGAGAGGACGGCAG...TATGCGCTCTACCTTTCCTCTCTGAGCAATAACCGACCGCGCCTGCTCTCTGCA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000105369.8 ENSMUST00000169546.9 ENSMUST00000170219.9 |
||
| CDS-3UTR CAA 90 bp | CTAAGTGCCCAGGGGACACTATATGTGCACACTTGGGATTTGGGGGCCGTGTACCTGCCGTCCTCTCTGTaGCCATTGCTTCCGCGCATG | + |
|
Preference number: 5 (lower is better) Translates to: LSAQGTLYVHTWDLGAVYLPSSL*PLLPRM Trigger: CATGCGCGGAAGCAATGGCAACAGAGAGGACGGCAG...GTACACGGCCCCCAAATCCCAAGTGTGCACATATAGTGTCCCCTGGGCACTTAG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000105369.8 ENSMUST00000169546.9 ENSMUST00000170219.9 |
||
| CDS GCA 90 bp | TATAGGGTGGGTGCCGTTGTCCAGATAAGTAGTGGTGGTCTTCTCTaGTTCCTCCATGGCCCTGTTGAAGCGCTGGTGCACCTCCCAGCA | + |
|
Preference number: 5 (lower is better) Translates to: YRVGAVVQISSGGLL*FLHGPVEALVHLPA Trigger: TGCTGGGAGGTGCACCAGCGCTTCAACAGGGCCATGGAGGAAGCAGAGAAGACCACCACTACTTATCTGGACAACGGCACCCACCCTATA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000105369.8 ENSMUST00000132523.8 ENSMUST00000147778.9 ENSMUST00000169546.9 ENSMUST00000170219.9 |
||
| CDS-3UTR CAA 90 bp | CTTGAAGCTGCCACCTGGGCTGTTCTGTCCGTTGTGTCCAAAGCCCAAGGCTCTTGGATAGTAGCGATTTaGAGGGGCGGTAGGTGGAGG | + |
|
Preference number: 5 (lower is better) Translates to: LEAATWAVLSVVSKAQGSWIVAI*RGGRWR Trigger: CCTCCACCTACCGCCCCTCAAAATCGCTACTATCCA...AGAGCCTTGGGCTTTGGACACAACGGACAGAACAGCCCAGGTGGCAGCTTCAAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000105369.8 ENSMUST00000169546.9 ENSMUST00000170219.9 |
||
| CDS-3UTR CAA 90 bp | ACCATATATGGACCGGAGAGTCCAGTCTCGTCATCCTCCCTGCAGTTGAGCCTGATAGCCAAGCTGTCCTaGGAGGTGGTAGCTGGGTGG | + |
|
Preference number: 5 (lower is better) Translates to: TIYGPESPVSSSSLQLSLIAKLS*EVVAGW Trigger: CCACCCAGCTACCACCTCCAAGGACAGCTTGGCTAT...CAGGCTCAACTGCAGGGAGGATGACGAGACTGGACTCTCCGGTCCATATATGGT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000105369.8 ENSMUST00000169546.9 ENSMUST00000170219.9 |
||
| CDS-3UTR CAA 90 bp | GGTTATTGCTCAGAGAGGAAAGGTAGAGCGCATACCATGGACAGGGTAAATCAAACTGAGTCGCGGTCATaGCCGCTGCTGCTGTGGTCC | + |
|
Preference number: 5 (lower is better) Translates to: GYCSERKGRAHTMDRVNQTESRS*PLLLWS Trigger: GGACCACAGCAGCAGCGGCAATGACCGCGACTCAGT...TTGATTTACCCTGTCCATGGTATGCGCTCTACCTTTCCTCTCTGAGCAATAACC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000105369.8 ENSMUST00000169546.9 ENSMUST00000170219.9 |
||
| CDS-3UTR CAA 90 bp | AGTGGGCAGGCACTCACAGCGAGTCTGCCCTATCTTTTGGCAATAAATAAAGCTCTGCCGTCCTCTCTGTaGCCATTGCTTCCGCGCATG | + |
|
Preference number: 5 (lower is better) Translates to: SGQALTASLPYLLAINKALPSSL*PLLPRM Trigger: CATGCGCGGAAGCAATGGCAACAGAGAGGACGGCAG...AGCTTTATTTATTGCCAAAAGATAGGGCAGACTCGCTGTGAGTGCCTGCCCACT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000105369.8 ENSMUST00000169546.9 ENSMUST00000170219.9 |
||
| CDS-3UTR CAA 90 bp | GGTTATTGCTCAGAGAGGAAAGGTAGAGCGCATACCATGGACAGGGTAAATCAAACCTCCCAGCAGCGTTaGCAGAGCAGAAGAACGCCA | + |
|
Preference number: 5 (lower is better) Translates to: GYCSERKGRAHTMDRVNQTSQQR*QSRRTP Trigger: TGGCGTTCTTCTGCTCTGCAAACGCTGCTGGGAGGT...TTGATTTACCCTGTCCATGGTATGCGCTCTACCTTTCCTCTCTGAGCAATAACC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000105369.8 ENSMUST00000147778.9 ENSMUST00000169546.9 ENSMUST00000170219.9 |
||
| CDS-3UTR CAA 90 bp | AGTGGGCAGGCACTCACAGCGAGTCTGCCCTATCTTTTGGCAATAAATAAAGCTTGGATAGTAGCGATTTaGAGGGGCGGTAGGTGGAGG | + |
|
Preference number: 5 (lower is better) Translates to: SGQALTASLPYLLAINKAWIVAI*RGGRWR Trigger: CCTCCACCTACCGCCCCTCAAAATCGCTACTATCCA...AGCTTTATTTATTGCCAAAAGATAGGGCAGACTCGCTGTGAGTGCCTGCCCACT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000105369.8 ENSMUST00000169546.9 ENSMUST00000170219.9 |
||
| CDS-3UTR CAA 90 bp | ATAAAACAGGTGGATTTGAGCTATGGCTATGAGGGTGTTTGGAAATATGGAGCATGGATAGTAGCGATTTaGAGGGGCGGTAGGTGGAGG | + |
|
Preference number: 5 (lower is better) Translates to: IKQVDLSYGYEGVWKYGAWIVAI*RGGRWR Trigger: CCTCCACCTACCGCCCCTCAAAATCGCTACTATCCA...TGCTCCATATTTCCAAACACCCTCATAGCCATAGCTCAAATCCACCTGTTTTAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000169546.9 ENSMUST00000170219.9 |
||
| CDS CAA 90 bp | TTGTCCAAGATGGGGTCAGGCTCCGCCGTGGGGCGGCTGGTGGCATaGTCCCACGAAGTCGTCAGGGCAACAGTGGCGGTAGTGGCGGCC | + |
|
Preference number: 6 (lower is better) Translates to: LSKMGSGSAVGRLVA*SHEVVRATVAVVAA Trigger: GGCCGCCACTACCGCCACTGTTGCCCTGACGACTTCGTGGGACAATGCCACCAGCCGCCCCACGGCGGAGCCTGACCCCATCTTGGACAA 67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000105369.8 ENSMUST00000132523.8 ENSMUST00000147778.9 ENSMUST00000169546.9 ENSMUST00000170219.9 |
||
| CDS CCA 72 bp | CCAAGATGGGGTCAGGCTCCGCCGTGGGGCGGCTGGTaGCATTGTCCCACGAAGTCGTCAGGGCAACAGTGG | + |
|
Preference number: 6 (lower is better) Translates to: PRWGQAPPWGGW*HCPTKSSGQQW Trigger: CCACTGTTGCCCTGACGACTTCGTGGGACAATGCCACCAGCCGCCCCACGGCGGAGCCTGACCCCATCTTGG 67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000105369.8 ENSMUST00000132523.8 ENSMUST00000147778.9 ENSMUST00000169546.9 ENSMUST00000170219.9 |
||
| CDS CAA 72 bp | ATGGGGTCAGGCTCCGCCGTGGGGCGGCTGGTGGCATaGTCCCACGAAGTCGTCAGGGCAACAGTGGCGGTA | + |
|
Preference number: 6 (lower is better) Translates to: MGSGSAVGRLVA*SHEVVRATVAV Trigger: TACCGCCACTGTTGCCCTGACGACTTCGTGGGACAATGCCACCAGCCGCCCCACGGCGGAGCCTGACCCCAT 67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000105369.8 ENSMUST00000132523.8 ENSMUST00000147778.9 ENSMUST00000169546.9 ENSMUST00000170219.9 |
||
| CDS CCA 72 bp | TGTCCAAGATGGGGTCAGGCTCCGCCGTGGGGCGGCTaGTGGCATTGTCCCACGAAGTCGTCAGGGCAACAG | + |
|
Preference number: 6 (lower is better) Translates to: CPRWGQAPPWGG*WHCPTKSSGQQ Trigger: CTGTTGCCCTGACGACTTCGTGGGACAATGCCACCAGCCGCCCCACGGCGGAGCCTGACCCCATCTTGGACA 65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000105369.8 ENSMUST00000132523.8 ENSMUST00000147778.9 ENSMUST00000169546.9 ENSMUST00000170219.9 |
||
| CDS CAA 72 bp | CTGCTTCCTCCATGGCCCGTGGGGCGGCTGGTGGCATaGTCCCACGAAGTCGTCAGGGCAACAGTGGCGGTA | + |
|
Preference number: 6 (lower is better) Translates to: LLPPWPVGRLVA*SHEVVRATVAV Trigger: TACCGCCACTGTTGCCCTGACGACTTCGTGGGACAATGCCACCAGCCGCCCCACGGGCCATGGAGGAAGCAG 65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000123967.2 |
||
| CDS CAA 90 bp | TCCTCCATGGCCCTGTTGAAGCGCTGGTGCACCTCCCAGCAGCGTTaGCAGAGCAGAAGAACGCCAGACAGCACCACCAGCGTGCCTCCA | + |
|
Preference number: 6 (lower is better) Translates to: SSMALLKRWCTSQQR*QSRRTPDSTTSVPP Trigger: TGGAGGCACGCTGGTGGTGCTGTCTGGCGTTCTTCTGCTCTGCAAACGCTGCTGGGAGGTGCACCAGCGCTTCAACAGGGCCATGGAGGA 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000105369.8 ENSMUST00000132523.8 ENSMUST00000147778.9 ENSMUST00000169546.9 ENSMUST00000170219.9 |
||
| CDS CCA 72 bp | GCACATAGTTGTCCAAGATGGGGTCAGGCTCCGCCGTaGGGCGGCTGGTGGCATTGTCCCACGAAGTCGTCA | + |
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Preference number: 6 (lower is better) Translates to: AHSCPRWGQAPP*GGWWHCPTKSS Trigger: TGACGACTTCGTGGGACAATGCCACCAGCCGCCCCACGGCGGAGCCTGACCCCATCTTGGACAACTATGTGC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000105369.8 ENSMUST00000132523.8 ENSMUST00000147778.9 ENSMUST00000169546.9 ENSMUST00000170219.9 |
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| CDS CCA 72 bp | ACATCACCACCACCAGCAGCACATAGTTGTCCAAGATaGGGTCAGGCTCCGCCGTGGGGCGGCTGGTGGCAT | + |
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Preference number: 6 (lower is better) Translates to: TSPPPAAHSCPR*GQAPPWGGWWH Trigger: ATGCCACCAGCCGCCCCACGGCGGAGCCTGACCCCATCTTGGACAACTATGTGCTGCTGGTGGTGGTGATGT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000105369.8 ENSMUST00000132523.8 ENSMUST00000147778.9 ENSMUST00000169546.9 ENSMUST00000170219.9 |
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| CDS GCA 72 bp | TGCAGAGCAGAAGAACGCCAGACAGCACCACCAGCGTaGCTCCAACGAACAGCGACATCACCACCACCAGCA | + |
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Preference number: 6 (lower is better) Translates to: CRAEERQTAPPA*LQRTATSPPPA Trigger: TGCTGGTGGTGGTGATGTCGCTGTTCGTTGGAGGCACGCTGGTGGTGCTGTCTGGCGTTCTTCTGCTCTGCA 60% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000105369.8 ENSMUST00000132523.8 ENSMUST00000147778.9 ENSMUST00000169546.9 ENSMUST00000170219.9 |
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| CDS GCA 72 bp | TTCTCTGCTTCCTCCATGGCCCTGTTGAAGCGCTGGTaGACCTCCCAGCAGCGTTTGCAGAGCAGAAGAACG | + |
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Preference number: 6 (lower is better) Translates to: FSASSMALLKRW*TSQQRLQSRRT Trigger: CGTTCTTCTGCTCTGCAAACGCTGCTGGGAGGTGCACCAGCGCTTCAACAGGGCCATGGAGGAAGCAGAGAA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000105369.8 ENSMUST00000132523.8 ENSMUST00000147778.9 ENSMUST00000169546.9 ENSMUST00000170219.9 |
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| CDS GCA 72 bp | GGTGCCGTTGTCCAGATAAGTAGTGGTGGTCTTCTCTaGTTCCTCCATGGCCCTGTTGAAGCGCTGGTGCAC | + |
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Preference number: 6 (lower is better) Translates to: GAVVQISSGGLL*FLHGPVEALVH Trigger: GTGCACCAGCGCTTCAACAGGGCCATGGAGGAAGCAGAGAAGACCACCACTACTTATCTGGACAACGGCACC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000105369.8 ENSMUST00000132523.8 ENSMUST00000147778.9 ENSMUST00000169546.9 ENSMUST00000170219.9 |
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