RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for CBARP (Mus musculus)

Ensembl gene IDs: ENSMUSG00000035640

Ensembl transcript IDs: ENSMUST00000105369.8, ENSMUST00000123967.2, ENSMUST00000132523.8, ENSMUST00000147778.9, ENSMUST00000169546.9, ENSMUST00000170219.9

Found 390 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp CCTCAAAGCAGGTGGAGACTCCGGAGGGGGTGGGAAGGCGGGTGCTaGCCCTCCACCTCCGGAACCCGAGCCCGAGCTATCGCCGCTGCG +
Preference number: 1 (lower is better)
Translates to: PQSRWRLRRGWEGGC*PSTSGTRARAIAAA
Trigger: CGCAGCGGCGATAGCTCGGGCTCGGGTTCCGGAGGTGGAGGGGCAGCACCCGCCTTCCCACCCCCTCCGGAGTCTCCACCTGCTTTGAGG
71% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000147778.9
3UTR GCA 90 bp AGGCCTCAAAGCAGGTGGAGACTCCGGAGGGGGTGGGAAGGCGGGTaGTGCCCCTCCACCTCCGGAACCCGAGCCCGAGCTATCGCCGCT +
Preference number: 1 (lower is better)
Translates to: RPQSRWRLRRGWEGG*CPSTSGTRARAIAA
Trigger: AGCGGCGATAGCTCGGGCTCGGGTTCCGGAGGTGGAGGGGCAGCACCCGCCTTCCCACCCCCTCCGGAGTCTCCACCTGCTTTGAGGCCT
70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000147778.9
3UTR GCA 90 bp TGGCGCACGTGTAGGGCGGGCCACTCCAGGGGGCGTGGCTGCACGTaGACCACCGGGGTCGCTGTGCTGCCGTCCTCTCTGTTGCCATTG +
Preference number: 1 (lower is better)
Translates to: WRTCRAGHSRGRGCT*TTGVAVLPSSLLPL
Trigger: CAATGGCAACAGAGAGGACGGCAGCACAGCGACCCCGGTGGTGCACGTGCAGCCACGCCCCCTGGAGTGGCCCGCCCTACACGTGCGCCA
70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000147778.9
3UTR TCA 90 bp GCTCTTGCTGCGGGTCCTGCTGCTGCGCATGCTCGGGCCCCAAACTaGTGCCATGCTCCGGAGGAGTCTCAGGGCTCGCTCCTCCCGCCG +
Preference number: 1 (lower is better)
Translates to: ALAAGPAAAHARAPN*CHAPEESQGSLLPP
Trigger: CGGCGGGAGGAGCGAGCCCTGAGACTCCTCCGGAGCATGGCATCAGTTTGGGGCCCGAGCATGCGCAGCAGCAGGACCCGCAGCAAGAGC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000147778.9
3UTR TCA 90 bp CCCTCCACCTCCGGAACCCGAGCCCGAGCTATCGCCGCTGCGCACTaGGTCGCGGTCATTGCCGCTGCTGCTGTGGTCCGATGCAGTGGC +
Preference number: 1 (lower is better)
Translates to: PSTSGTRARAIAAAH*VAVIAAAAVVRCSG
Trigger: GCCACTGCATCGGACCACAGCAGCAGCGGCAATGACCGCGACTCAGTGCGCAGCGGCGATAGCTCGGGCTCGGGTTCCGGAGGTGGAGGG
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000147778.9
3UTR GCA 90 bp GTGCTGCCCCTCCACCTCCGGAACCCGAGCCCGAGCTATCGCCGCTaGGCACTGAGTCGCGGTCATTGCCGCTGCTGCTGTGGTCCGATG +
Preference number: 1 (lower is better)
Translates to: VLPLHLRNPSPSYRR*ALSRGHCRCCCGPM
Trigger: CATCGGACCACAGCAGCAGCGGCAATGACCGCGACTCAGTGCGCAGCGGCGATAGCTCGGGCTCGGGTTCCGGAGGTGGAGGGGCAGCAC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000147778.9
3UTR GCA 90 bp GCATGCTCGGCGTCCTGCTCTTGCTGCGGGTCCTGCTGCTGCGCATaGTCGGGCCCCAAACTGATGCCATGCTCCGGAGGAGTCTCAGGG +
Preference number: 1 (lower is better)
Translates to: ACSASCSCCGSCCCA*SGPKLMPCSGGVSG
Trigger: CCCTGAGACTCCTCCGGAGCATGGCATCAGTTTGGGGCCCGAGCATGCGCAGCAGCAGGACCCGCAGCAAGAGCAGGACGCCGAGCATGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000147778.9
3UTR GCA 90 bp CACTGTGCATGCTCGGCGTCCTGCTCTTGCTGCGGGTCCTGCTGCTaGGCATGCTCGGGCCCCAAACTGATGCCATGCTCCGGAGGAGTC +
Preference number: 1 (lower is better)
Translates to: HCACSASCSCCGSCC*ACSGPKLMPCSGGV
Trigger: GACTCCTCCGGAGCATGGCATCAGTTTGGGGCCCGAGCATGCGCAGCAGCAGGACCCGCAGCAAGAGCAGGACGCCGAGCATGCACAGTG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000147778.9
3UTR GCA 90 bp CTGCACTGTGCATGCTCGGCGTCCTGCTCTTGCTGCGGGTCCTGCTaGTGCGCATGCTCGGGCCCCAAACTGATGCCATGCTCCGGAGGA +
Preference number: 1 (lower is better)
Translates to: LHCACSASCSCCGSC*CACSGPKLMPCSGG
Trigger: TCCTCCGGAGCATGGCATCAGTTTGGGGCCCGAGCATGCGCAGCAGCAGGACCCGCAGCAAGAGCAGGACGCCGAGCATGCACAGTGCAG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000147778.9
3UTR GCA 90 bp CCGAGCTATCGCCGCTGCGCACTGAGTCGCGGTCATTGCCGCTGCTaGTGTGGTCCGATGCAGTGGCTGCATGGAGCTCGAGCGAAGCAC +
Preference number: 1 (lower is better)
Translates to: PSYRRCALSRGHCRC*CGPMQWLHGARAKH
Trigger: GTGCTTCGCTCGAGCTCCATGCAGCCACTGCATCGGACCACAGCAGCAGCGGCAATGACCGCGACTCAGTGCGCAGCGGCGATAGCTCGG
66% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000147778.9
3UTR GCA 90 bp AGCCCGAGCTATCGCCGCTGCGCACTGAGTCGCGGTCATTGCCGCTaGTGCTGTGGTCCGATGCAGTGGCTGCATGGAGCTCGAGCGAAG +
Preference number: 1 (lower is better)
Translates to: SPSYRRCALSRGHCR*CCGPMQWLHGARAK
Trigger: CTTCGCTCGAGCTCCATGCAGCCACTGCATCGGACCACAGCAGCAGCGGCAATGACCGCGACTCAGTGCGCAGCGGCGATAGCTCGGGCT
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000147778.9
3UTR GCA 90 bp AACCCGAGCCCGAGCTATCGCCGCTGCGCACTGAGTCGCGGTCATTaGCGCTGCTGCTGTGGTCCGATGCAGTGGCTGCATGGAGCTCGA +
Preference number: 1 (lower is better)
Translates to: NPSPSYRRCALSRGH*RCCCGPMQWLHGAR
Trigger: TCGAGCTCCATGCAGCCACTGCATCGGACCACAGCAGCAGCGGCAATGACCGCGACTCAGTGCGCAGCGGCGATAGCTCGGGCTCGGGTT
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000147778.9
3UTR GCA 90 bp CATGGCGCAGGAACTCATGGAAAAGAGCGTCCGTCTTCTCGTCGATaGTGTAATCGCGGCGCGGCCTGCGTGGCCAGGCTCGCGGGCTGC +
Preference number: 1 (lower is better)
Translates to: HGAGTHGKERPSSRR*CNRGAACVARLAGC
Trigger: GCAGCCCGCGAGCCTGGCCACGCAGGCCGCGCCGCGATTACAGCATCGACGAGAAGACGGACGCTCTTTTCCATGAGTTCCTGCGCCATG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000147778.9
3UTR TCA 90 bp CCTTGTCCTGAGCCTTGCGGCTCTGTTCAAACAGGGCAGCCTCGTTaGAGGACACGCGGCGGCCGGTGGAGCTGGTGGCTAGGAAGCGCT +
Preference number: 1 (lower is better)
Translates to: PCPEPCGSVQTGQPR*RTRGGRWSWWLGSA
Trigger: AGCGCTTCCTAGCCACCAGCTCCACCGGCCGCCGCGTGTCCTTCAACGAGGCTGCCCTGTTTGAACAGAGCCGCAAGGCTCAGGACAAGG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000132523.8
ENSMUST00000147778.9
3UTR CCA 90 bp GGAGAGTCCAGTCTCGTCATCCTCCCTGCAGTTGAGCCTGGGTCCTaGAGCCTCTTGCTTCCGGAGGCCACTGCGCTAAGTGCCCAGGGG +
Preference number: 1 (lower is better)
Translates to: GESSLVILPAVEPGS*SLLLPEATALSAQG
Trigger: CCCCTGGGCACTTAGCGCAGTGGCCTCCGGAAGCAAGAGGCTCCAGGACCCAGGCTCAACTGCAGGGAGGATGACGAGACTGGACTCTCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000105369.8
ENSMUST00000147778.9
ENSMUST00000169546.9
ENSMUST00000170219.9
3UTR CCA 90 bp CTATCGCCGCTGCGCACTGAGTCGCGGTCATTGCCGCTGCTGCTGTaGTCCGATGCAGTGGCTGCATGGAGCTCGAGCGAAGCACGAAGG +
Preference number: 1 (lower is better)
Translates to: LSPLRTESRSLPLLL*SDAVAAWSSSEARR
Trigger: CCTTCGTGCTTCGCTCGAGCTCCATGCAGCCACTGCATCGGACCACAGCAGCAGCGGCAATGACCGCGACTCAGTGCGCAGCGGCGATAG
64% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000147778.9
3UTR CCA 90 bp ACCACCGCCTCCACCGCCAGGCTCCTCCTCGATGACAGGAATGGATaGGTCATCACCCGTGATGGGCAGCGCACGGCCTTCAGGAGGACA +
Preference number: 1 (lower is better)
Translates to: TTASTARLLLDDRNG*VITRDGQRTAFRRT
Trigger: TGTCCTCCTGAAGGCCGTGCGCTGCCCATCACGGGTGATGACCCATCCATTCCTGTCATCGAGGAGGAGCCTGGCGGTGGAGGCGGTGGT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000147778.9
3UTR TCA 90 bp ACGTCCCCCTCCTGCTCCATGCTCTCACTGGCTGCCCGCTGCCGCTaGAAGTGGTGCCTCTTAGGGGAACCTCTCGTGTCCAGACTGGAC +
Preference number: 1 (lower is better)
Translates to: TSPSCSMLSLAARCR*KWCLLGEPLVSRLD
Trigger: GTCCAGTCTGGACACGAGAGGTTCCCCTAAGAGGCACCACTTTCAGCGGCAGCGGGCAGCCAGTGAGAGCATGGAGCAGGAGGGGGACGT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000147778.9
3UTR GCA 90 bp GAGCAGGAAGTTCTGAAACTTCGTCGCCTGCTCCGCGCCCCTCGATaGTCGCATAGCCACTGTCCATCTGTAGCAGGCGGCGGGCTTCGC +
Preference number: 1 (lower is better)
Translates to: EQEVLKLRRLLRAPR*SHSHCPSVAGGGLR
Trigger: GCGAAGCCCGCCGCCTGCTACAGATGGACAGTGGCTATGCGAGCATCGAGGGGCGCGGAGCAGGCGACGAAGTTTCAGAACTTCCTGCTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000147778.9
3UTR CCA 90 bp GCACTGAGTCGCGGTCATTGCCGCTGCTGCTGTGGTCCGATGCAGTaGCTGCATGGAGCTCGAGCGAAGCACGAAGGCTCCACAGGTCAC +
Preference number: 1 (lower is better)
Translates to: ALSRGHCRCCCGPMQ*LHGARAKHEGSTGH
Trigger: GTGACCTGTGGAGCCTTCGTGCTTCGCTCGAGCTCCATGCAGCCACTGCATCGGACCACAGCAGCAGCGGCAATGACCGCGACTCAGTGC
63% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000147778.9
3UTR CCA 90 bp CAACTGGCTCAGCAAGACGGGGAGAGAAGAGTCTCTCGTCGAGGCTaGCTGCTAGCTTGTCTAGCAGGGCCCCGGCGGGCTCAACGCACA +
Preference number: 1 (lower is better)
Translates to: QLAQQDGERRVSRRG*LLACLAGPRRAQRT
Trigger: TGTGCGTTGAGCCCGCCGGGGCCCTGCTAGACAAGCTAGCAGCCAGCCTCGACGAGAGACTCTTCTCTCCCCGTCTTGCTGAGCCAGTTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000147778.9
3UTR TCA 90 bp CTGTTCTGTCCGTTGTGTCCAAAGCCCAAGGCTCTCGGGGAGGAATaGGACGGGGAGCCTGTGCACATGCAGAGAGCAGGCGCGGTCGGT +
Preference number: 1 (lower is better)
Translates to: LFCPLCPKPKALGEE*DGEPVHMQRAGAVG
Trigger: ACCGACCGCGCCTGCTCTCTGCATGTGCACAGGCTCCCCGTCTCATTCCTCCCCGAGAGCCTTGGGCTTTGGACACAACGGACAGAACAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000105369.8
ENSMUST00000147778.9
ENSMUST00000169546.9
ENSMUST00000170219.9
3UTR TCA 90 bp TTGAGGGGCGGTAGGTGGAGGTGGGTGAGGCGGGCATTCTTGAGGTaGTGGAAATCCCCTTCTGTCAGGGTGTACCGGCGGCCCTTGTCC +
Preference number: 1 (lower is better)
Translates to: LRGGRWRWVRRAFLR*WKSPSVRVYRRPLS
Trigger: GGACAAGGGCCGCCGGTACACCCTGACAGAAGGGGATTTCCATCACCTCAAGAATGCCCGCCTCACCCACCTCCACCTACCGCCCCTCAA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000123967.2
ENSMUST00000147778.9
3UTR GCA 90 bp GCCTGGGTCCTGGAGCCTCTTGCTTCCGGAGGCCACTGCGCTAAGTaGCCAGGGGACACTATATGTGCACACTTGGGATTTGGGGGCCGT +
Preference number: 1 (lower is better)
Translates to: AWVLEPLASGGHCAK*PGDTICAHLGFGGR
Trigger: ACGGCCCCCAAATCCCAAGTGTGCACATATAGTGTCCCCTGGGCACTTAGCGCAGTGGCCTCCGGAAGCAAGAGGCTCCAGGACCCAGGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENSMUST00000105369.8
ENSMUST00000147778.9
ENSMUST00000169546.9
ENSMUST00000170219.9
3UTR GCA 90 bp GGTTGCTCCCGCTGTTGCCACCATTCCCACAGCAGCCCCATGTGCTaGCGGAGAAGCAGCAGAGAGGCAGGTCCAGTACAGAGCTTAGGC +
Preference number: 1 (lower is better)
Translates to: GCSRCCHHSHSSPMC*RRSSREAGPVQSLG
Trigger: GCCTAAGCTCTGTACTGGACCTGCCTCTCTGCTGCTTCTCCGGCAGCACATGGGGCTGCTGTGGGAATGGTGGCAACAGCGGGAGCAACC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000147778.9
3UTR TCA 90 bp CCATATATGGACCGGAGAGTCCAGTCTCGTCATCCTCCCTGCAGTTaGGCCTGGGTCCTGGAGCCTCTTGCTTCCGGAGGCCACTGCGCT +
Preference number: 1 (lower is better)
Translates to: PYMDRRVQSRHPPCS*AWVLEPLASGGHCA
Trigger: AGCGCAGTGGCCTCCGGAAGCAAGAGGCTCCAGGACCCAGGCTCAACTGCAGGGAGGATGACGAGACTGGACTCTCCGGTCCATATATGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000105369.8
ENSMUST00000147778.9
ENSMUST00000169546.9
ENSMUST00000170219.9
3UTR TCA 90 bp CAGGCAGTGTTACTGCCTGCCAGTGCTCACGAGTGGAGGGTCAGCTaGTCCTGGAGGGAGGCTGCACATGCACCTCAGAACCTGCTCCAC +
Preference number: 1 (lower is better)
Translates to: QAVLLPASAHEWRVS*SWREAAHAPQNLLH
Trigger: GTGGAGCAGGTTCTGAGGTGCATGTGCAGCCTCCCTCCAGGATCAGCTGACCCTCCACTCGTGAGCACTGGCAGGCAGTAACACTGCCTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000105369.8
ENSMUST00000147778.9
ENSMUST00000169546.9
ENSMUST00000170219.9
3UTR GCA 90 bp TGCCAGTGCTCACGAGTGGAGGGTCAGCTGATCCTGGAGGGAGGCTaGACATGCACCTCAGAACCTGCTCCACCAGCATCTGTGGCCAGA +
Preference number: 1 (lower is better)
Translates to: CQCSRVEGQLILEGG*TCTSEPAPPASVAR
Trigger: TCTGGCCACAGATGCTGGTGGAGCAGGTTCTGAGGTGCATGTGCAGCCTCCCTCCAGGATCAGCTGACCCTCCACTCGTGAGCACTGGCA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000105369.8
ENSMUST00000147778.9
ENSMUST00000169546.9
ENSMUST00000170219.9
3UTR GCA 90 bp ACCTCCAGTAGGTTCGCTCACACAGTGGCAGGCAGTGTTACTGCCTaGCAGTGCTCACGAGTGGAGGGTCAGCTGATCCTGGAGGGAGGC +
Preference number: 1 (lower is better)
Translates to: TSSRFAHTVAGSVTA*QCSRVEGQLILEGG
Trigger: GCCTCCCTCCAGGATCAGCTGACCCTCCACTCGTGAGCACTGGCAGGCAGTAACACTGCCTGCCACTGTGTGAGCGAACCTACTGGAGGT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000105369.8
ENSMUST00000147778.9
ENSMUST00000169546.9
ENSMUST00000170219.9
3UTR CCA 90 bp GAGGCCACTGCGCTAAGTGCCCAGGGGACACTATATGTGCACACTTaGGATTTGGGGGCCGTGTACCCATGCACGGCCACCTCAGGTTGC +
Preference number: 1 (lower is better)
Translates to: EATALSAQGTLYVHT*DLGAVYPCTATSGC
Trigger: GCAACCTGAGGTGGCCGTGCATGGGTACACGGCCCCCAAATCCCAAGTGTGCACATATAGTGTCCCCTGGGCACTTAGCGCAGTGGCCTC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENSMUST00000105369.8
ENSMUST00000147778.9
ENSMUST00000169546.9
ENSMUST00000170219.9
3UTR GCA 90 bp GGGACACTATATGTGCACACTTGGGATTTGGGGGCCGTGTACCCATaGACGGCCACCTCAGGTTGCTCCCGCTGTTGCCACCATTCCCAC +
Preference number: 1 (lower is better)
Translates to: GTLYVHTWDLGAVYP*TATSGCSRCCHHSH
Trigger: GTGGGAATGGTGGCAACAGCGGGAGCAACCTGAGGTGGCCGTGCATGGGTACACGGCCCCCAAATCCCAAGTGTGCACATATAGTGTCCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENSMUST00000105369.8
ENSMUST00000147778.9
ENSMUST00000169546.9
ENSMUST00000170219.9
3UTR CCA 90 bp AGGGAGGCTGCACATGCACCTCAGAACCTGCTCCACCAGCATCTGTaGCCAGAGGCTGGGTGCTGGGGTCAACCATATATGGACCGGAGA +
Preference number: 1 (lower is better)
Translates to: REAAHAPQNLLHQHL*PEAGCWGQPYMDRR
Trigger: TCTCCGGTCCATATATGGTTGACCCCAGCACCCAGCCTCTGGCCACAGATGCTGGTGGAGCAGGTTCTGAGGTGCATGTGCAGCCTCCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000105369.8
ENSMUST00000147778.9
ENSMUST00000169546.9
ENSMUST00000170219.9
3UTR CCA 90 bp ACCAGCATCTGTGGCCAGAGGCTGGGTGCTGGGGTCAACCATATATaGACCGGAGAGTCCAGTCTCGTCATCCTCCCTGCAGTTGAGCCT +
Preference number: 1 (lower is better)
Translates to: TSICGQRLGAGVNHI*TGESSLVILPAVEP
Trigger: AGGCTCAACTGCAGGGAGGATGACGAGACTGGACTCTCCGGTCCATATATGGTTGACCCCAGCACCCAGCCTCTGGCCACAGATGCTGGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000105369.8
ENSMUST00000147778.9
ENSMUST00000169546.9
ENSMUST00000170219.9
3UTR TCA 90 bp CATCTAACGAAATGCCCTCCCCAGAGTCACTGGAGGTTGAGGGGCTaGTCTCTGAGAAGTCCACGGAGTTGTAGGGACCTCCTGGCAGGG +
Preference number: 1 (lower is better)
Translates to: HLTKCPPQSHWRLRG*SLRSPRSCRDLLAG
Trigger: CCCTGCCAGGAGGTCCCTACAACTCCGTGGACTTCTCAGAGATCAGCCCCTCAACCTCCAGTGACTCTGGGGAGGGCATTTCGTTAGATG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000147778.9
3UTR GCA 90 bp GACGGGGAGCCTGTGCACATGCAGAGAGCAGGCGCGGTCGGTTATTaGTCAGAGAGGAAAGGTAGAGCGCATACCATGGACAGGGTAAAT +
Preference number: 1 (lower is better)
Translates to: DGEPVHMQRAGAVGY*SERKGRAHTMDRVN
Trigger: ATTTACCCTGTCCATGGTATGCGCTCTACCTTTCCTCTCTGAGCAATAACCGACCGCGCCTGCTCTCTGCATGTGCACAGGCTCCCCGTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000105369.8
ENSMUST00000147778.9
ENSMUST00000169546.9
ENSMUST00000170219.9
3UTR GCA 90 bp CTTCCGCGCATGAGTGTGAGGATGTGCACGTGTGCGGTGACGCGGTaGATCGTCAAAATGAGGGTCATGGCGCAGGAACTCATGGAAAAG +
Preference number: 1 (lower is better)
Translates to: LPRMSVRMCTCAVTR*IVKMRVMAQELMEK
Trigger: CTTTTCCATGAGTTCCTGCGCCATGACCCTCATTTTGACGATGCACCGCGTCACCGCACACGTGCACATCCTCACACTCATGCGCGGAAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000147778.9
3UTR GCA 90 bp AATCAACTCAGAATATGGGGCGGCGAGCTCCTCTCTGATCCTCAGTaGCCCACAGTCACTTCACCTCCAGTAGGTTCGCTCACACAGTGG +
Preference number: 1 (lower is better)
Translates to: NQLRIWGGELLSDPQ*PTVTSPPVGSLTQW
Trigger: CCACTGTGTGAGCGAACCTACTGGAGGTGAAGTGACTGTGGGGCACTGAGGATCAGAGAGGAGCTCGCCGCCCCATATTCTGAGTTGATT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000105369.8
ENSMUST00000147778.9
ENSMUST00000169546.9
ENSMUST00000170219.9
3UTR CCA 90 bp AAAGGTAGAGCGCATACCATGGACAGGGTAAATCAACTCAGAATATaGGGCGGCGAGCTCCTCTCTGATCCTCAGTGCCCCACAGTCACT +
Preference number: 1 (lower is better)
Translates to: KGRAHTMDRVNQLRI*GGELLSDPQCPTVT
Trigger: AGTGACTGTGGGGCACTGAGGATCAGAGAGGAGCTCGCCGCCCCATATTCTGAGTTGATTTACCCTGTCCATGGTATGCGCTCTACCTTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000105369.8
ENSMUST00000147778.9
ENSMUST00000169546.9
ENSMUST00000170219.9
3UTR TCA 90 bp GCGAGTCTGCCCTATCTTTTGGCAATAAATAAAGCTTGGGAAACTTaGAGCTGCCACCTGGGCTGTTCTGTCCGTTGTGTCCAAAGCCCA +
Preference number: 1 (lower is better)
Translates to: ASLPYLLAINKAWET*SCHLGCSVRCVQSP
Trigger: TGGGCTTTGGACACAACGGACAGAACAGCCCAGGTGGCAGCTTCAAGTTTCCCAAGCTTTATTTATTGCCAAAAGATAGGGCAGACTCGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000105369.8
ENSMUST00000147778.9
ENSMUST00000169546.9
ENSMUST00000170219.9
3UTR-3UTR GCA 90 bp GGTGGGAAGGCGGGTGCTGCCCCTCCACCTCCGGAACCCGAGCCCGAGCTATCGGAGACGGGGAGCCTGTaGACATGCAGAGAGCAGGCG +
Preference number: 2 (lower is better)
Translates to: GGKAGAAPPPPEPEPELSETGSL*TCREQA
Trigger: CGCCTGCTCTCTGCATGTGCACAGGCTCCCCGTCTC...CGATAGCTCGGGCTCGGGTTCCGGAGGTGGAGGGGCAGCACCCGCCTTCCCACC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000147778.9
3UTR CAA 90 bp GAACCCGAGCCCGAGCTATCGCCGCTGCGCACTGAGTCGCGGTCATaGCCGCTGCTGCTGTGGTCCGATGCAGTGGCTGCATGGAGCTCG +
Preference number: 2 (lower is better)
Translates to: EPEPELSPLRTESRS*PLLLWSDAVAAWSS
Trigger: CGAGCTCCATGCAGCCACTGCATCGGACCACAGCAGCAGCGGCAATGACCGCGACTCAGTGCGCAGCGGCGATAGCTCGGGCTCGGGTTC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000147778.9
3UTR-3UTR CCA 90 bp GGCTCTCGGGGAGGAATGAGACGGGGAGCCTGTGCACATGCAGAGAGCAGGCGCCAGGCCCAGCAGCCTTaGCACCCCGGGTACCTGCAT +
Preference number: 2 (lower is better)
Translates to: GSRGGMRRGACAHAESRRQAQQP*HPGYLH
Trigger: ATGCAGGTACCCGGGGTGCCAAGGCTGCTGGGCCTG...GCGCCTGCTCTCTGCATGTGCACAGGCTCCCCGTCTCATTCCTCCCCGAGAGCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000147778.9
3UTR-3UTR GCA 90 bp GGCTCTCGGGGAGGAATGAGACGGGGAGCCTGTGCACATGCAGAGAGCAGGCGCGAGACGGGGAGCCTGTaGACATGCAGAGAGCAGGCG +
Preference number: 2 (lower is better)
Translates to: GSRGGMRRGACAHAESRRETGSL*TCREQA
Trigger: CGCCTGCTCTCTGCATGTGCACAGGCTCCCCGTCTC...GCGCCTGCTCTCTGCATGTGCACAGGCTCCCCGTCTCATTCCTCCCCGAGAGCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENSMUST00000105369.8
ENSMUST00000147778.9
ENSMUST00000169546.9
ENSMUST00000170219.9
3UTR-3UTR CCA 90 bp GCCTGTGCCCATCTCCCCAGGCACTGTTTCAGGCCCAGCAGCCTTGGCACCCCGGTTGAGCCTGGGTCCTaGAGCCTCTTGCTTCCGGAG +
Preference number: 2 (lower is better)
Translates to: ACAHLPRHCFRPSSLGTPVEPGS*SLLLPE
Trigger: CTCCGGAAGCAAGAGGCTCCAGGACCCAGGCTCAAC...CGGGGTGCCAAGGCTGCTGGGCCTGAAACAGTGCCTGGGGAGATGGGCACAGGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000147778.9
3UTR CAA 90 bp GGCTGCACGTGCACCACCGGGGTCGCTGTGCTGCCGTCCTCTCTGTaGCCATTGCTTCCGCGCATGAGTGTGAGGATGTGCACGTGTGCG +
Preference number: 2 (lower is better)
Translates to: GCTCTTGVAVLPSSL*PLLPRMSVRMCTCA
Trigger: CGCACACGTGCACATCCTCACACTCATGCGCGGAAGCAATGGCAACAGAGAGGACGGCAGCACAGCGACCCCGGTGGTGCACGTGCAGCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000147778.9
3UTR CAA 90 bp GCAAGACGGGGAGAGAAGAGTCTCTCGTCGAGGCTGGCTGCTAGCTaGTCTAGCAGGGCCCCGGCGGGCTCAACGCACAACCCAGAGCCT +
Preference number: 2 (lower is better)
Translates to: ARRGEKSLSSRLAAS*SSRAPAGSTHNPEP
Trigger: AGGCTCTGGGTTGTGCGTTGAGCCCGCCGGGGCCCTGCTAGACAAGCTAGCAGCCAGCCTCGACGAGAGACTCTTCTCTCCCCGTCTTGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000147778.9
3UTR-3UTR TCA 90 bp GAGTCGCGGTCATTGCCGCTGCTGCTGTGGTCCGATGCAGTGGCTGCATGGAGCCATCCTCCCTGCAGTTaGGCCTGGGTCCTGGAGCCT +
Preference number: 2 (lower is better)
Translates to: ESRSLPLLLWSDAVAAWSHPPCS*AWVLEP
Trigger: AGGCTCCAGGACCCAGGCTCAACTGCAGGGAGGATG...GCTCCATGCAGCCACTGCATCGGACCACAGCAGCAGCGGCAATGACCGCGACTC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000147778.9
3UTR-3UTR GCA 90 bp AATGAAGTCGGCATGGGGGACGTCCCCCTCCTGCTCCATGCTCTCACTGGCTGCGCTTCCGGAGGCCACTaGGCTAAGTGCCCAGGGGAC +
Preference number: 2 (lower is better)
Translates to: NEVGMGDVPLLLHALTGCASGGH*AKCPGD
Trigger: GTCCCCTGGGCACTTAGCGCAGTGGCCTCCGGAAGC...GCAGCCAGTGAGAGCATGGAGCAGGAGGGGGACGTCCCCCATGCCGACTTCATT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENSMUST00000147778.9
3UTR-3UTR GCA 90 bp GCACTGAGTCGCGGTCATTGCCGCTGCTGCTGTGGTCCGATGCAGTGGCTGCATGGGAGCCTGTGCACATaGAGAGAGCAGGCGCGGTCG +
Preference number: 2 (lower is better)
Translates to: ALSRGHCRCCCGPMQWLHGSLCT*REQARS
Trigger: CGACCGCGCCTGCTCTCTGCATGTGCACAGGCTCCC...ATGCAGCCACTGCATCGGACCACAGCAGCAGCGGCAATGACCGCGACTCAGTGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000147778.9
3UTR-3UTR CCA 90 bp GTGAGGGTTTTCCCAGGGGGCGGCGGCCCTTGTCCTGAGCCTTGCGGCTCTGTTGGCCGGTGGAGCTGGTaGCTAGGAAGCGCTCTGTTT +
Preference number: 2 (lower is better)
Translates to: VRVFPGGGGPCPEPCGSVGRWSW*LGSALF
Trigger: AAACAGAGCGCTTCCTAGCCACCAGCTCCACCGGCC...AACAGAGCCGCAAGGCTCAGGACAAGGGCCGCCGCCCCCTGGGAAAACCCTCAC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000132523.8
3UTR-3UTR CCA 90 bp AAAGAGCGTCCGTCTTCTCGTCGATGCTGTAATCGCGGCGCGGCCTGCGTGGCCTGGCTCCATCCAGGCTaGCATGTCGGCGTAGCCGAG +
Preference number: 2 (lower is better)
Translates to: KERPSSRRCCNRGAACVAWLHPG*HVGVAE
Trigger: CTCGGCTACGCCGACATGCCAGCCTGGATGGAGCCA...GGCCACGCAGGCCGCGCCGCGATTACAGCATCGACGAGAAGACGGACGCTCTTT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000147778.9
3UTR CAA 90 bp CACTTGGGATTTGGGGGCCGTGTACCCATGCACGGCCACCTCAGGTaGCTCCCGCTGTTGCCACCATTCCCACAGCAGCCCCATGTGCTG +
Preference number: 2 (lower is better)
Translates to: HLGFGGRVPMHGHLR*LPLLPPFPQQPHVL
Trigger: CAGCACATGGGGCTGCTGTGGGAATGGTGGCAACAGCGGGAGCAACCTGAGGTGGCCGTGCATGGGTACACGGCCCCCAAATCCCAAGTG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENSMUST00000105369.8
ENSMUST00000147778.9
ENSMUST00000169546.9
ENSMUST00000170219.9
3UTR CAA 90 bp ACGTGCACCACCGGGGTCGCTGTGCTGCCGTCCTCTCTGTTGCCATaGCTTCCGCGCATGAGTGTGAGGATGTGCACGTGTGCGGTGACG +
Preference number: 2 (lower is better)
Translates to: TCTTGVAVLPSSLLP*LPRMSVRMCTCAVT
Trigger: CGTCACCGCACACGTGCACATCCTCACACTCATGCGCGGAAGCAATGGCAACAGAGAGGACGGCAGCACAGCGACCCCGGTGGTGCACGT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000147778.9
3UTR-3UTR TCA 90 bp GCTGATCCTGGAGGGAGGCTGCACATGCACCTCAGAACCTGCTCCACCAGCATCGGAGCTGGGGCCGACTaGGTGGCCGGTGAGGGTTTT +
Preference number: 2 (lower is better)
Translates to: ADPGGRLHMHLRTCSTSIGAGAD*VAGEGF
Trigger: AAAACCCTCACCGGCCACTCAGTCGGCCCCAGCTCC...GATGCTGGTGGAGCAGGTTCTGAGGTGCATGTGCAGCCTCCCTCCAGGATCAGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000147778.9
3UTR-3UTR TCA 90 bp GGCCAGAGGCTGGGTGCTGGGGTCAACCATATATGGACCGGAGAGTCCAGTCTCCGGCGGCCCTTGTCCTaGGCCTTGCGGCTCTGTTCA +
Preference number: 2 (lower is better)
Translates to: GQRLGAGVNHIWTGESSLRRPLS*ALRLCS
Trigger: TGAACAGAGCCGCAAGGCTCAGGACAAGGGCCGCCG...GAGACTGGACTCTCCGGTCCATATATGGTTGACCCCAGCACCCAGCCTCTGGCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000147778.9
3UTR-3UTR GCA 90 bp GGCCGTGTACCCATGCACGGCCACCTCAGGTTGCTCCCGCTGTTGCCACCATTCAGCAGCCCCATGTGCTaGCGGAGAAGCAGCAGAGAG +
Preference number: 2 (lower is better)
Translates to: GRVPMHGHLRLLPLLPPFSSPMC*RRSSRE
Trigger: CTCTCTGCTGCTTCTCCGGCAGCACATGGGGCTGCT...GAATGGTGGCAACAGCGGGAGCAACCTGAGGTGGCCGTGCATGGGTACACGGCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000105369.8
ENSMUST00000147778.9
ENSMUST00000169546.9
ENSMUST00000170219.9
3UTR-3UTR GCA 90 bp CTCTCGGGGAGGAATGAGACGGGGAGCCTGTGCACATGCAGAGAGCAGGCGCGGGAGGGAGGCTGCACATaGACCTCAGAACCTGCTCCA +
Preference number: 2 (lower is better)
Translates to: LSGRNETGSLCTCREQAREGGCT*TSEPAP
Trigger: TGGAGCAGGTTCTGAGGTGCATGTGCAGCCTCCCTC...CCGCGCCTGCTCTCTGCATGTGCACAGGCTCCCCGTCTCATTCCTCCCCGAGAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000105369.8
ENSMUST00000147778.9
ENSMUST00000169546.9
ENSMUST00000170219.9
3UTR-3UTR GCA 90 bp CACTCATGGATAGTAGCGATTTTGAGGGGCGGTAGGTGGAGGTGGGTGAGGCGGGTGGGGTGTGGCCGCTaGACTGGCCTCCCCCGAATC +
Preference number: 2 (lower is better)
Translates to: HSWIVAILRGGRWRWVRRVGCGR*TGLPRI
Trigger: GATTCGGGGGAGGCCAGTGCAGCGGCCACACCCCAC...CCGCCTCACCCACCTCCACCTACCGCCCCTCAAAATCGCTACTATCCATGAGTG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENSMUST00000123967.2
ENSMUST00000147778.9
3UTR-3UTR TCA 90 bp GGCCAGAGGCTGGGTGCTGGGGTCAACCATATATGGACCGGAGAGTCCAGTCTCCATCCTCCCTGCAGTTaGGCCTGGGTCCTGGAGCCT +
Preference number: 2 (lower is better)
Translates to: GQRLGAGVNHIWTGESSLHPPCS*AWVLEP
Trigger: AGGCTCCAGGACCCAGGCTCAACTGCAGGGAGGATG...GAGACTGGACTCTCCGGTCCATATATGGTTGACCCCAGCACCCAGCCTCTGGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000105369.8
ENSMUST00000147778.9
ENSMUST00000169546.9
ENSMUST00000170219.9
3UTR-3UTR TCA 90 bp ACGGGGAGCCTGTGCACATGCAGAGAGCAGGCGCGGTCGGTTATTGCTCAGAGACGGCGAGCTCCTCTCTaGTCCTCAGTGCCCCACAGT +
Preference number: 2 (lower is better)
Translates to: TGSLCTCREQARSVIAQRRRAPL*SSVPHS
Trigger: ACTGTGGGGCACTGAGGATCAGAGAGGAGCTCGCCG...TCTCTGAGCAATAACCGACCGCGCCTGCTCTCTGCATGTGCACAGGCTCCCCGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000105369.8
ENSMUST00000147778.9
ENSMUST00000169546.9
ENSMUST00000170219.9
3UTR-3UTR CCA 90 bp GGCTCTCGGGGAGGAATGAGACGGGGAGCCTGTGCACATGCAGAGAGCAGGCGCCCAGAGGCTGGGTGCTaGGGTCAACCATATATGGAC +
Preference number: 2 (lower is better)
Translates to: GSRGGMRRGACAHAESRRPEAGC*GQPYMD
Trigger: GTCCATATATGGTTGACCCCAGCACCCAGCCTCTGG...GCGCCTGCTCTCTGCATGTGCACAGGCTCCCCGTCTCATTCCTCCCCGAGAGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000105369.8
ENSMUST00000147778.9
ENSMUST00000169546.9
ENSMUST00000170219.9
3UTR-3UTR CCA 90 bp GGCACTGTTTCAGGCCCAGCAGCCTTGGCACCCCGGGTACCTGCATCTAACGAACTCCACCAGCATCTGTaGCCAGAGGCTGGGTGCTGG +
Preference number: 2 (lower is better)
Translates to: GTVSGPAALAPRVPASNELHQHL*PEAGCW
Trigger: CCAGCACCCAGCCTCTGGCCACAGATGCTGGTGGAG...TTCGTTAGATGCAGGTACCCGGGGTGCCAAGGCTGCTGGGCCTGAAACAGTGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000147778.9
3UTR CAA 90 bp ACTGCGCTAAGTGCCCAGGGGACACTATATGTGCACACTTGGGATTaGGGGGCCGTGTACCCATGCACGGCCACCTCAGGTTGCTCCCGC +
Preference number: 2 (lower is better)
Translates to: TALSAQGTLYVHTWD*GAVYPCTATSGCSR
Trigger: GCGGGAGCAACCTGAGGTGGCCGTGCATGGGTACACGGCCCCCAAATCCCAAGTGTGCACATATAGTGTCCCCTGGGCACTTAGCGCAGT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENSMUST00000105369.8
ENSMUST00000147778.9
ENSMUST00000169546.9
ENSMUST00000170219.9
3UTR CAA 90 bp GGAGGCCACTGCGCTAAGTGCCCAGGGGACACTATATGTGCACACTaGGGATTTGGGGGCCGTGTACCCATGCACGGCCACCTCAGGTTG +
Preference number: 2 (lower is better)
Translates to: GGHCAKCPGDTICAH*GFGGRVPMHGHLRL
Trigger: CAACCTGAGGTGGCCGTGCATGGGTACACGGCCCCCAAATCCCAAGTGTGCACATATAGTGTCCCCTGGGCACTTAGCGCAGTGGCCTCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENSMUST00000105369.8
ENSMUST00000147778.9
ENSMUST00000169546.9
ENSMUST00000170219.9
3UTR-3UTR GCA 90 bp TCAGCTGATCCTGGAGGGAGGCTGCACATGCACCTCAGAACCTGCTCCACCAGCAGCAGCCCCATGTGCTaGCGGAGAAGCAGCAGAGAG +
Preference number: 2 (lower is better)
Translates to: SADPGGRLHMHLRTCSTSSSPMC*RRSSRE
Trigger: CTCTCTGCTGCTTCTCCGGCAGCACATGGGGCTGCT...GCTGGTGGAGCAGGTTCTGAGGTGCATGTGCAGCCTCCCTCCAGGATCAGCTGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000105369.8
ENSMUST00000147778.9
ENSMUST00000169546.9
ENSMUST00000170219.9
3UTR-3UTR GCA 90 bp ACGGGGAGCCTGTGCACATGCAGAGAGCAGGCGCGGTCGGTTATTGCTCAGAGAAGCAGCCCCATGTGCTaGCGGAGAAGCAGCAGAGAG +
Preference number: 2 (lower is better)
Translates to: TGSLCTCREQARSVIAQRSSPMC*RRSSRE
Trigger: CTCTCTGCTGCTTCTCCGGCAGCACATGGGGCTGCT...TCTCTGAGCAATAACCGACCGCGCCTGCTCTCTGCATGTGCACAGGCTCCCCGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000105369.8
ENSMUST00000147778.9
ENSMUST00000169546.9
ENSMUST00000170219.9
3UTR-3UTR GCA 90 bp CCTGTGCACATGCAGAGAGCAGGCGCGGTCGGTTATTGCTCAGAGAGGAAAGGTGCTTCCGGAGGCCACTaGGCTAAGTGCCCAGGGGAC +
Preference number: 2 (lower is better)
Translates to: PVHMQRAGAVGYCSERKGASGGH*AKCPGD
Trigger: GTCCCCTGGGCACTTAGCGCAGTGGCCTCCGGAAGC...ACCTTTCCTCTCTGAGCAATAACCGACCGCGCCTGCTCTCTGCATGTGCACAGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000105369.8
ENSMUST00000147778.9
ENSMUST00000169546.9
ENSMUST00000170219.9
3UTR-3UTR GCA 90 bp CGGGGAGCCTGTGCACATGCAGAGAGCAGGCGCGGTCGGTTATTGCTCAGAGAGGAGGGAGGCTGCACATaGACCTCAGAACCTGCTCCA +
Preference number: 2 (lower is better)
Translates to: RGACAHAESRRGRLLLREEGGCT*TSEPAP
Trigger: TGGAGCAGGTTCTGAGGTGCATGTGCAGCCTCCCTC...CTCTCTGAGCAATAACCGACCGCGCCTGCTCTCTGCATGTGCACAGGCTCCCCG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000105369.8
ENSMUST00000147778.9
ENSMUST00000169546.9
ENSMUST00000170219.9
3UTR-3UTR GCA 90 bp CTTGAAGCTGCCACCTGGGCTGTTCTGTCCGTTGTGTCCAAAGCCCAAGGCTCTGGGAGCCTGTGCACATaGAGAGAGCAGGCGCGGTCG +
Preference number: 2 (lower is better)
Translates to: LEAATWAVLSVVSKAQGSGSLCT*REQARS
Trigger: CGACCGCGCCTGCTCTCTGCATGTGCACAGGCTCCC...AGAGCCTTGGGCTTTGGACACAACGGACAGAACAGCCCAGGTGGCAGCTTCAAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000105369.8
ENSMUST00000147778.9
ENSMUST00000169546.9
ENSMUST00000170219.9
3UTR-3UTR CCA 90 bp GCAGGCGCGGTCGGTTATTGCTCAGAGAGGAAAGGTAGAGCGCATACCATGGACGAGGTGGTAGCTGGGTaGGGTGTGGCCGCTGCACTG +
Preference number: 2 (lower is better)
Translates to: AGAVGYCSERKGRAHTMDEVVAG*GVAAAL
Trigger: CAGTGCAGCGGCCACACCCCACCCAGCTACCACCTC...GTCCATGGTATGCGCTCTACCTTTCCTCTCTGAGCAATAACCGACCGCGCCTGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000147778.9
3UTR-3UTR CCA 90 bp ATCCTGGAGGGAGGCTGCACATGCACCTCAGAACCTGCTCCACCAGCATCTGTGCTGGGGCCGACTGAGTaGCCGGTGAGGGTTTTCCCA +
Preference number: 2 (lower is better)
Translates to: ILEGGCTCTSEPAPPASVLGPTE*PVRVFP
Trigger: TGGGAAAACCCTCACCGGCCACTCAGTCGGCCCCAG...CACAGATGCTGGTGGAGCAGGTTCTGAGGTGCATGTGCAGCCTCCCTCCAGGAT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000147778.9
3UTR CAA 90 bp AGTCTCGTCATCCTCCCTGCAGTTGAGCCTGGGTCCTGGAGCCTCTaGCTTCCGGAGGCCACTGCGCTAAGTGCCCAGGGGACACTATAT +
Preference number: 2 (lower is better)
Translates to: SLVILPAVEPGSWSL*LPEATALSAQGTLY
Trigger: ATATAGTGTCCCCTGGGCACTTAGCGCAGTGGCCTCCGGAAGCAAGAGGCTCCAGGACCCAGGCTCAACTGCAGGGAGGATGACGAGACT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000105369.8
ENSMUST00000147778.9
ENSMUST00000169546.9
ENSMUST00000170219.9
3UTR CAA 90 bp GCTGCACTGGCCTCCCCCGAATCACACTCATGGATAGTAGCGATTTaGAGGGGCGGTAGGTGGAGGTGGGTGAGGCGGGCATTCTTGAGG +
Preference number: 2 (lower is better)
Translates to: AALASPESHSWIVAI*RGGRWRWVRRAFLR
Trigger: CCTCAAGAATGCCCGCCTCACCCACCTCCACCTACCGCCCCTCAAAATCGCTACTATCCATGAGTGTGATTCGGGGGAGGCCAGTGCAGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000123967.2
ENSMUST00000147778.9
3UTR-3UTR TCA 90 bp CCTGTGCACATGCAGAGAGCAGGCGCGGTCGGTTATTGCTCAGAGAGGAAAGGTGAGTGGAGGGTCAGCTaGTCCTGGAGGGAGGCTGCA +
Preference number: 2 (lower is better)
Translates to: PVHMQRAGAVGYCSERKGEWRVS*SWREAA
Trigger: TGCAGCCTCCCTCCAGGATCAGCTGACCCTCCACTC...ACCTTTCCTCTCTGAGCAATAACCGACCGCGCCTGCTCTCTGCATGTGCACAGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000105369.8
ENSMUST00000147778.9
ENSMUST00000169546.9
ENSMUST00000170219.9
3UTR-3UTR GCA 90 bp ATCCTGGAGGGAGGCTGCACATGCACCTCAGAACCTGCTCCACCAGCATCTGTGAGCAGCCCCATGTGCTaGCGGAGAAGCAGCAGAGAG +
Preference number: 2 (lower is better)
Translates to: ILEGGCTCTSEPAPPASVSSPMC*RRSSRE
Trigger: CTCTCTGCTGCTTCTCCGGCAGCACATGGGGCTGCT...CACAGATGCTGGTGGAGCAGGTTCTGAGGTGCATGTGCAGCCTCCCTCCAGGAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000105369.8
ENSMUST00000147778.9
ENSMUST00000169546.9
ENSMUST00000170219.9
3UTR-3UTR GCA 90 bp GGAAACTTGAAGCTGCCACCTGGGCTGTTCTGTCCGTTGTGTCCAAAGCCCAAGGGGAGCCTGTGCACATaGAGAGAGCAGGCGCGGTCG +
Preference number: 2 (lower is better)
Translates to: GNLKLPPGLFCPLCPKPKGSLCT*REQARS
Trigger: CGACCGCGCCTGCTCTCTGCATGTGCACAGGCTCCC...CTTGGGCTTTGGACACAACGGACAGAACAGCCCAGGTGGCAGCTTCAAGTTTCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000105369.8
ENSMUST00000147778.9
ENSMUST00000169546.9
ENSMUST00000170219.9
3UTR-3UTR CCA 90 bp TCAGCTGATCCTGGAGGGAGGCTGCACATGCACCTCAGAACCTGCTCCACCAGCTCTGTGGCCAGAGGCTaGGTGCTGGGGTCAACCATA +
Preference number: 2 (lower is better)
Translates to: SADPGGRLHMHLRTCSTSSVARG*VLGSTI
Trigger: TATGGTTGACCCCAGCACCCAGCCTCTGGCCACAGA...GCTGGTGGAGCAGGTTCTGAGGTGCATGTGCAGCCTCCCTCCAGGATCAGCTGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000105369.8
ENSMUST00000147778.9
ENSMUST00000169546.9
ENSMUST00000170219.9
3UTR-3UTR CCA 90 bp GCAGGCGCGGTCGGTTATTGCTCAGAGAGGAAAGGTAGAGCGCATACCATGGACCTCCACCAGCATCTGTaGCCAGAGGCTGGGTGCTGG +
Preference number: 2 (lower is better)
Translates to: AGAVGYCSERKGRAHTMDLHQHL*PEAGCW
Trigger: CCAGCACCCAGCCTCTGGCCACAGATGCTGGTGGAG...GTCCATGGTATGCGCTCTACCTTTCCTCTCTGAGCAATAACCGACCGCGCCTGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000105369.8
ENSMUST00000147778.9
ENSMUST00000169546.9
ENSMUST00000170219.9
3UTR-3UTR CCA 90 bp GAAATGCCCTCCCCAGAGTCACTGGAGGTTGAGGGGCTGATCTCTGAGAAGTCCCTGGGGCCGACTGAGTaGCCGGTGAGGGTTTTCCCA +
Preference number: 2 (lower is better)
Translates to: EMPSPESLEVEGLISEKSLGPTE*PVRVFP
Trigger: TGGGAAAACCCTCACCGGCCACTCAGTCGGCCCCAG...GGACTTCTCAGAGATCAGCCCCTCAACCTCCAGTGACTCTGGGGAGGGCATTTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENSMUST00000132523.8
ENSMUST00000147778.9
3UTR-3UTR TCA 90 bp AACTTGAAGCTGCCACCTGGGCTGTTCTGTCCGTTGTGTCCAAAGCCCAAGGCTCATCCTCCCTGCAGTTaGGCCTGGGTCCTGGAGCCT +
Preference number: 2 (lower is better)
Translates to: NLKLPPGLFCPLCPKPKAHPPCS*AWVLEP
Trigger: AGGCTCCAGGACCCAGGCTCAACTGCAGGGAGGATG...AGCCTTGGGCTTTGGACACAACGGACAGAACAGCCCAGGTGGCAGCTTCAAGTT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000105369.8
ENSMUST00000147778.9
ENSMUST00000169546.9
ENSMUST00000170219.9
3UTR-3UTR TCA 90 bp TGCAGAGAGCAGGCGCGGTCGGTTATTGCTCAGAGAGGAAAGGTAGAGCGCATACATCCTCCCTGCAGTTaGGCCTGGGTCCTGGAGCCT +
Preference number: 2 (lower is better)
Translates to: CREQARSVIAQRGKVERIHPPCS*AWVLEP
Trigger: AGGCTCCAGGACCCAGGCTCAACTGCAGGGAGGATG...TATGCGCTCTACCTTTCCTCTCTGAGCAATAACCGACCGCGCCTGCTCTCTGCA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000105369.8
ENSMUST00000147778.9
ENSMUST00000169546.9
ENSMUST00000170219.9
3UTR-3UTR GCA 90 bp TCAGCTGATCCTGGAGGGAGGCTGCACATGCACCTCAGAACCTGCTCCACCAGCCCTTGTCCTGAGCCTTaGGGCTCTGTTCAAACAGGG +
Preference number: 2 (lower is better)
Translates to: SADPGGRLHMHLRTCSTSPCPEP*GSVQTG
Trigger: CCCTGTTTGAACAGAGCCGCAAGGCTCAGGACAAGG...GCTGGTGGAGCAGGTTCTGAGGTGCATGTGCAGCCTCCCTCCAGGATCAGCTGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000147778.9
3UTR-3UTR CCA 90 bp TCAGCTGATCCTGGAGGGAGGCTGCACATGCACCTCAGAACCTGCTCCACCAGCCCAGAGGCTGGGTGCTaGGGTCAACCATATATGGAC +
Preference number: 2 (lower is better)
Translates to: SADPGGRLHMHLRTCSTSPEAGC*GQPYMD
Trigger: GTCCATATATGGTTGACCCCAGCACCCAGCCTCTGG...GCTGGTGGAGCAGGTTCTGAGGTGCATGTGCAGCCTCCCTCCAGGATCAGCTGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000105369.8
ENSMUST00000147778.9
ENSMUST00000169546.9
ENSMUST00000170219.9
3UTR-3UTR CCA 90 bp AACTTGAAGCTGCCACCTGGGCTGTTCTGTCCGTTGTGTCCAAAGCCCAAGGCTCTCCACCAGCATCTGTaGCCAGAGGCTGGGTGCTGG +
Preference number: 2 (lower is better)
Translates to: NLKLPPGLFCPLCPKPKALHQHL*PEAGCW
Trigger: CCAGCACCCAGCCTCTGGCCACAGATGCTGGTGGAG...AGCCTTGGGCTTTGGACACAACGGACAGAACAGCCCAGGTGGCAGCTTCAAGTT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000105369.8
ENSMUST00000147778.9
ENSMUST00000169546.9
ENSMUST00000170219.9
3UTR-3UTR CCA 90 bp ACGGGGAGCCTGTGCACATGCAGAGAGCAGGCGCGGTCGGTTATTGCTCAGAGAGGTTCGCTCACACAGTaGCAGGCAGTGTTACTGCCT +
Preference number: 2 (lower is better)
Translates to: TGSLCTCREQARSVIAQRGSLTQ*QAVLLP
Trigger: AGGCAGTAACACTGCCTGCCACTGTGTGAGCGAACC...TCTCTGAGCAATAACCGACCGCGCCTGCTCTCTGCATGTGCACAGGCTCCCCGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000105369.8
ENSMUST00000147778.9
ENSMUST00000169546.9
ENSMUST00000170219.9
3UTR-3UTR CCA 90 bp AAGCACGAAGGCTCCACAGGTCACGGTAGCTGCACTGTGCATGCTCGGCGTCCTCTTGAAGCTGCCACCTaGGCTGTTCTGTCCGTTGTG +
Preference number: 2 (lower is better)
Translates to: KHEGSTGHGSCTVHARRPLEAAT*AVLSVV
Trigger: CACAACGGACAGAACAGCCCAGGTGGCAGCTTCAAG...AGGACGCCGAGCATGCACAGTGCAGCTACCGTGACCTGTGGAGCCTTCGTGCTT
59% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000147778.9
3UTR-3UTR CCA 90 bp TGTGGCCGCTGCACTGGCCTCCCCCGAATCACACTCATGGATAGTAGCGATTTTGGCGGTAGGTGGAGGTaGGTGAGGCGGGCATTCTTG +
Preference number: 2 (lower is better)
Translates to: CGRCTGLPRITLMDSSDFGGRWR*VRRAFL
Trigger: CAAGAATGCCCGCCTCACCCACCTCCACCTACCGCC...AAAATCGCTACTATCCATGAGTGTGATTCGGGGGAGGCCAGTGCAGCGGCCACA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000123967.2
ENSMUST00000147778.9
3UTR-3UTR TCA 90 bp GCCAGAGGCTGGGTGCTGGGGTCAACCATATATGGACCGGAGAGTCCAGTCTCGAAAGCTTGGGAAACTTaGAGCTGCCACCTGGGCTGT +
Preference number: 2 (lower is better)
Translates to: ARGWVLGSTIYGPESPVSKAWET*SCHLGC
Trigger: ACAGCCCAGGTGGCAGCTTCAAGTTTCCCAAGCTTT...CGAGACTGGACTCTCCGGTCCATATATGGTTGACCCCAGCACCCAGCCTCTGGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000105369.8
ENSMUST00000147778.9
ENSMUST00000169546.9
ENSMUST00000170219.9
3UTR-3UTR TCA 90 bp CCCATGTGCTGCCGGAGAAGCAGCAGAGAGGCAGGTCCAGTACAGAGCTTAGGCCGGGCATTCTTGAGGTaGTGGAAATCCCCTTCTGTC +
Preference number: 2 (lower is better)
Translates to: PMCCRRSSREAGPVQSLGRAFLR*WKSPSV
Trigger: GACAGAAGGGGATTTCCATCACCTCAAGAATGCCCG...GCCTAAGCTCTGTACTGGACCTGCCTCTCTGCTGCTTCTCCGGCAGCACATGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000147778.9
3UTR-3UTR GCA 90 bp GGGAAACTTGAAGCTGCCACCTGGGCTGTTCTGTCCGTTGTGTCCAAAGCCCAACACAGCAGCCCCATGTaGTGCCGGAGAAGCAGCAGA +
Preference number: 2 (lower is better)
Translates to: GKLEAATWAVLSVVSKAQHSSPM*CRRSSR
Trigger: TCTGCTGCTTCTCCGGCAGCACATGGGGCTGCTGTG...TTGGGCTTTGGACACAACGGACAGAACAGCCCAGGTGGCAGCTTCAAGTTTCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000105369.8
ENSMUST00000147778.9
ENSMUST00000169546.9
ENSMUST00000170219.9
3UTR-3UTR GCA 90 bp CCAGAGGCTGGGTGCTGGGGTCAACCATATATGGACCGGAGAGTCCAGTCTCGTGGCCACTGCGCTAAGTaGCCAGGGGACACTATATGT +
Preference number: 2 (lower is better)
Translates to: PEAGCWGQPYMDRRVQSRGHCAK*PGDTIC
Trigger: ACATATAGTGTCCCCTGGGCACTTAGCGCAGTGGCC...ACGAGACTGGACTCTCCGGTCCATATATGGTTGACCCCAGCACCCAGCCTCTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000105369.8
ENSMUST00000147778.9
ENSMUST00000169546.9
ENSMUST00000170219.9
3UTR-3UTR GCA 90 bp GGAGCCTGTGCACATGCAGAGAGCAGGCGCGGTCGGTTATTGCTCAGAGAGGAATGGCCAGAGGCTGGGTaGTGGGGTCAACCATATATG +
Preference number: 2 (lower is better)
Translates to: GACAHAESRRGRLLLREEWPEAG*WGQPYM
Trigger: CATATATGGTTGACCCCAGCACCCAGCCTCTGGCCA...TTCCTCTCTGAGCAATAACCGACCGCGCCTGCTCTCTGCATGTGCACAGGCTCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000105369.8
ENSMUST00000147778.9
ENSMUST00000169546.9
ENSMUST00000170219.9
3UTR-3UTR CCA 90 bp TGCAGAGAGCAGGCGCGGTCGGTTATTGCTCAGAGAGGAAAGGTAGAGCGCATAGTTGAGCCTGGGTCCTaGAGCCTCTTGCTTCCGGAG +
Preference number: 2 (lower is better)
Translates to: CREQARSVIAQRGKVERIVEPGS*SLLLPE
Trigger: CTCCGGAAGCAAGAGGCTCCAGGACCCAGGCTCAAC...TATGCGCTCTACCTTTCCTCTCTGAGCAATAACCGACCGCGCCTGCTCTCTGCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000105369.8
ENSMUST00000147778.9
ENSMUST00000169546.9
ENSMUST00000170219.9
3UTR-3UTR CCA 90 bp TCAGCTGATCCTGGAGGGAGGCTGCACATGCACCTCAGAACCTGCTCCACCAGCGGGGTCAACCATATATaGACCGGAGAGTCCAGTCTC +
Preference number: 2 (lower is better)
Translates to: SADPGGRLHMHLRTCSTSGVNHI*TGESSL
Trigger: GAGACTGGACTCTCCGGTCCATATATGGTTGACCCC...GCTGGTGGAGCAGGTTCTGAGGTGCATGTGCAGCCTCCCTCCAGGATCAGCTGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000105369.8
ENSMUST00000147778.9
ENSMUST00000169546.9
ENSMUST00000170219.9
3UTR-3UTR CCA 90 bp GCCATTGCTTCCGCGCATGAGTGTGAGGATGTGCACGTGTGCGGTGACGCGGTGAATCAACTCAGAATATaGGGCGGCGAGCTCCTCTCT +
Preference number: 2 (lower is better)
Translates to: AIASAHECEDVHVCGDAVNQLRI*GGELLS
Trigger: AGAGAGGAGCTCGCCGCCCCATATTCTGAGTTGATT...CACCGCGTCACCGCACACGTGCACATCCTCACACTCATGCGCGGAAGCAATGGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000147778.9
3UTR-3UTR CCA 90 bp GGAAACTTGAAGCTGCCACCTGGGCTGTTCTGTCCGTTGTGTCCAAAGCCCAAGGGCCGGTGGAGCTGGTaGCTAGGAAGCGCTCTGTTT +
Preference number: 2 (lower is better)
Translates to: GNLKLPPGLFCPLCPKPKGRWSW*LGSALF
Trigger: AAACAGAGCGCTTCCTAGCCACCAGCTCCACCGGCC...CTTGGGCTTTGGACACAACGGACAGAACAGCCCAGGTGGCAGCTTCAAGTTTCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000147778.9
3UTR-3UTR GCA 90 bp TCAGCTGATCCTGGAGGGAGGCTGCACATGCACCTCAGAACCTGCTCCACCAGCAGGGGACACTATATGTaGACACTTGGGATTTGGGGG +
Preference number: 2 (lower is better)
Translates to: SADPGGRLHMHLRTCSTSRGHYM*TLGIWG
Trigger: CCCCCAAATCCCAAGTGTGCACATATAGTGTCCCCT...GCTGGTGGAGCAGGTTCTGAGGTGCATGTGCAGCCTCCCTCCAGGATCAGCTGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000105369.8
ENSMUST00000147778.9
ENSMUST00000169546.9
ENSMUST00000170219.9
3UTR-3UTR GCA 90 bp GCAGGCGCGGTCGGTTATTGCTCAGAGAGGAAAGGTAGAGCGCATACCATGGACGGCCACTGCGCTAAGTaGCCAGGGGACACTATATGT +
Preference number: 2 (lower is better)
Translates to: AGAVGYCSERKGRAHTMDGHCAK*PGDTIC
Trigger: ACATATAGTGTCCCCTGGGCACTTAGCGCAGTGGCC...GTCCATGGTATGCGCTCTACCTTTCCTCTCTGAGCAATAACCGACCGCGCCTGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000105369.8
ENSMUST00000147778.9
ENSMUST00000169546.9
ENSMUST00000170219.9
3UTR-3UTR GCA 90 bp AACTTGAAGCTGCCACCTGGGCTGTTCTGTCCGTTGTGTCCAAAGCCCAAGGCTGAGGGAGGCTGCACATaGACCTCAGAACCTGCTCCA +
Preference number: 2 (lower is better)
Translates to: NLKLPPGLFCPLCPKPKAEGGCT*TSEPAP
Trigger: TGGAGCAGGTTCTGAGGTGCATGTGCAGCCTCCCTC...AGCCTTGGGCTTTGGACACAACGGACAGAACAGCCCAGGTGGCAGCTTCAAGTT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000105369.8
ENSMUST00000147778.9
ENSMUST00000169546.9
ENSMUST00000170219.9
3UTR-3UTR GCA 90 bp CCTGTGCACATGCAGAGAGCAGGCGCGGTCGGTTATTGCTCAGAGAGGAAAGGTATCCTGGAGGGAGGCTaGACATGCACCTCAGAACCT +
Preference number: 2 (lower is better)
Translates to: PVHMQRAGAVGYCSERKGILEGG*TCTSEP
Trigger: AGGTTCTGAGGTGCATGTGCAGCCTCCCTCCAGGAT...ACCTTTCCTCTCTGAGCAATAACCGACCGCGCCTGCTCTCTGCATGTGCACAGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000105369.8
ENSMUST00000147778.9
ENSMUST00000169546.9
ENSMUST00000170219.9
3UTR-3UTR GCA 90 bp TGCAGAGAGCAGGCGCGGTCGGTTATTGCTCAGAGAGGAAAGGTAGAGCGCATAGGCAGGCAGTGTTACTaGCTGCCAGTGCTCACGAGT +
Preference number: 2 (lower is better)
Translates to: CREQARSVIAQRGKVERIGRQCY*LPVLTS
Trigger: ACTCGTGAGCACTGGCAGGCAGTAACACTGCCTGCC...TATGCGCTCTACCTTTCCTCTCTGAGCAATAACCGACCGCGCCTGCTCTCTGCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000105369.8
ENSMUST00000147778.9
ENSMUST00000169546.9
ENSMUST00000170219.9
3UTR-3UTR CCA 90 bp GATCCTGGAGGGAGGCTGCACATGCACCTCAGAACCTGCTCCACCAGCATCTGTGGGGTCAACCATATATaGACCGGAGAGTCCAGTCTC +
Preference number: 2 (lower is better)
Translates to: DPGGRLHMHLRTCSTSICGVNHI*TGESSL
Trigger: GAGACTGGACTCTCCGGTCCATATATGGTTGACCCC...ACAGATGCTGGTGGAGCAGGTTCTGAGGTGCATGTGCAGCCTCCCTCCAGGATC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000105369.8
ENSMUST00000147778.9
ENSMUST00000169546.9
ENSMUST00000170219.9
3UTR-3UTR CCA 90 bp GCAGGCGCGGTCGGTTATTGCTCAGAGAGGAAAGGTAGAGCGCATACCATGGACGGTTCGCTCACACAGTaGCAGGCAGTGTTACTGCCT +
Preference number: 2 (lower is better)
Translates to: AGAVGYCSERKGRAHTMDGSLTQ*QAVLLP
Trigger: AGGCAGTAACACTGCCTGCCACTGTGTGAGCGAACC...GTCCATGGTATGCGCTCTACCTTTCCTCTCTGAGCAATAACCGACCGCGCCTGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000105369.8
ENSMUST00000147778.9
ENSMUST00000169546.9
ENSMUST00000170219.9
3UTR-3UTR TCA 90 bp GTGGCCGCTGCACTGGCCTCCCCCGAATCACACTCATGGATAGTAGCGATTTTGCGGGCATTCTTGAGGTaGTGGAAATCCCCTTCTGTC +
Preference number: 2 (lower is better)
Translates to: VAAALASPESHSWIVAILRAFLR*WKSPSV
Trigger: GACAGAAGGGGATTTCCATCACCTCAAGAATGCCCG...CAAAATCGCTACTATCCATGAGTGTGATTCGGGGGAGGCCAGTGCAGCGGCCAC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENSMUST00000123967.2
ENSMUST00000147778.9
3UTR-3UTR GCA 90 bp GATCCTGGAGGGAGGCTGCACATGCACCTCAGAACCTGCTCCACCAGCATCTGTAGGGGACACTATATGTaGACACTTGGGATTTGGGGG +
Preference number: 2 (lower is better)
Translates to: DPGGRLHMHLRTCSTSICRGHYM*TLGIWG
Trigger: CCCCCAAATCCCAAGTGTGCACATATAGTGTCCCCT...ACAGATGCTGGTGGAGCAGGTTCTGAGGTGCATGTGCAGCCTCCCTCCAGGATC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000105369.8
ENSMUST00000147778.9
ENSMUST00000169546.9
ENSMUST00000170219.9
3UTR-3UTR GCA 90 bp CCAGAGGCTGGGTGCTGGGGTCAACCATATATGGACCGGAGAGTCCAGTCTCGTAGGGGACACTATATGTaGACACTTGGGATTTGGGGG +
Preference number: 2 (lower is better)
Translates to: PEAGCWGQPYMDRRVQSRRGHYM*TLGIWG
Trigger: CCCCCAAATCCCAAGTGTGCACATATAGTGTCCCCT...ACGAGACTGGACTCTCCGGTCCATATATGGTTGACCCCAGCACCCAGCCTCTGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000105369.8
ENSMUST00000147778.9
ENSMUST00000169546.9
ENSMUST00000170219.9
3UTR-3UTR GCA 90 bp GGAAACTTGAAGCTGCCACCTGGGCTGTTCTGTCCGTTGTGTCCAAAGCCCAAGGGCCACTGCGCTAAGTaGCCAGGGGACACTATATGT +
Preference number: 2 (lower is better)
Translates to: GNLKLPPGLFCPLCPKPKGHCAK*PGDTIC
Trigger: ACATATAGTGTCCCCTGGGCACTTAGCGCAGTGGCC...CTTGGGCTTTGGACACAACGGACAGAACAGCCCAGGTGGCAGCTTCAAGTTTCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000105369.8
ENSMUST00000147778.9
ENSMUST00000169546.9
ENSMUST00000170219.9
3UTR-3UTR GCA 90 bp ACCATATATGGACCGGAGAGTCCAGTCTCGTCATCCTCCCTGCAGTTGAGCCTGGGCCACTGCGCTAAGTaGCCAGGGGACACTATATGT +
Preference number: 2 (lower is better)
Translates to: TIYGPESPVSSSSLQLSLGHCAK*PGDTIC
Trigger: ACATATAGTGTCCCCTGGGCACTTAGCGCAGTGGCC...CAGGCTCAACTGCAGGGAGGATGACGAGACTGGACTCTCCGGTCCATATATGGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000105369.8
ENSMUST00000147778.9
ENSMUST00000169546.9
ENSMUST00000170219.9
3UTR-3UTR GCA 90 bp GATCCTCAGTGCCCCACAGTCACTTCACCTCCAGTAGGTTCGCTCACACAGTGGGGCGCGGTCGGTTATTaGTCAGAGAGGAAAGGTAGA +
Preference number: 2 (lower is better)
Translates to: DPQCPTVTSPPVGSLTQWGAVGY*SERKGR
Trigger: TCTACCTTTCCTCTCTGAGCAATAACCGACCGCGCC...CCACTGTGTGAGCGAACCTACTGGAGGTGAAGTGACTGTGGGGCACTGAGGATC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000105369.8
ENSMUST00000147778.9
ENSMUST00000169546.9
ENSMUST00000170219.9
3UTR-3UTR TCA 90 bp AGTGGGCAGGCACTCACAGCGAGTCTGCCCTATCTTTTGGCAATAAATAAAGCTCGGCGAGCTCCTCTCTaGTCCTCAGTGCCCCACAGT +
Preference number: 2 (lower is better)
Translates to: SGQALTASLPYLLAINKARRAPL*SSVPHS
Trigger: ACTGTGGGGCACTGAGGATCAGAGAGGAGCTCGCCG...AGCTTTATTTATTGCCAAAAGATAGGGCAGACTCGCTGTGAGTGCCTGCCCACT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000105369.8
ENSMUST00000147778.9
ENSMUST00000169546.9
ENSMUST00000170219.9
3UTR-3UTR GCA 90 bp GGTTATTGCTCAGAGAGGAAAGGTAGAGCGCATACCATGGACAGGGTAAATCAAGCTTCCGGAGGCCACTaGGCTAAGTGCCCAGGGGAC +
Preference number: 2 (lower is better)
Translates to: GYCSERKGRAHTMDRVNQASGGH*AKCPGD
Trigger: GTCCCCTGGGCACTTAGCGCAGTGGCCTCCGGAAGC...TTGATTTACCCTGTCCATGGTATGCGCTCTACCTTTCCTCTCTGAGCAATAACC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000105369.8
ENSMUST00000147778.9
ENSMUST00000169546.9
ENSMUST00000170219.9
3UTR-3UTR GCA 90 bp GGAAACTTGAAGCTGCCACCTGGGCTGTTCTGTCCGTTGTGTCCAAAGCCCAAGCTGCATCTAACGAAATaGCCTCCCCAGAGTCACTGG +
Preference number: 2 (lower is better)
Translates to: GNLKLPPGLFCPLCPKPKLHLTK*PPQSHW
Trigger: CCAGTGACTCTGGGGAGGGCATTTCGTTAGATGCAG...CTTGGGCTTTGGACACAACGGACAGAACAGCCCAGGTGGCAGCTTCAAGTTTCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000147778.9
3UTR-3UTR CCA 90 bp GGAAACTTGAAGCTGCCACCTGGGCTGTTCTGTCCGTTGTGTCCAAAGCCCAAGGGGGTCAACCATATATaGACCGGAGAGTCCAGTCTC +
Preference number: 2 (lower is better)
Translates to: GNLKLPPGLFCPLCPKPKGVNHI*TGESSL
Trigger: GAGACTGGACTCTCCGGTCCATATATGGTTGACCCC...CTTGGGCTTTGGACACAACGGACAGAACAGCCCAGGTGGCAGCTTCAAGTTTCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENSMUST00000105369.8
ENSMUST00000147778.9
ENSMUST00000169546.9
ENSMUST00000170219.9
3UTR-3UTR CCA 90 bp TGCAGAGAGCAGGCGCGGTCGGTTATTGCTCAGAGAGGAAAGGTAGAGCGCATAAATCAACTCAGAATATaGGGCGGCGAGCTCCTCTCT +
Preference number: 2 (lower is better)
Translates to: CREQARSVIAQRGKVERINQLRI*GGELLS
Trigger: AGAGAGGAGCTCGCCGCCCCATATTCTGAGTTGATT...TATGCGCTCTACCTTTCCTCTCTGAGCAATAACCGACCGCGCCTGCTCTCTGCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000105369.8
ENSMUST00000147778.9
ENSMUST00000169546.9
ENSMUST00000170219.9
3UTR-3UTR CCA 90 bp AGTGGGCAGGCACTCACAGCGAGTCTGCCCTATCTTTTGGCAATAAATAAAGCTCTTGAAGCTGCCACCTaGGCTGTTCTGTCCGTTGTG +
Preference number: 2 (lower is better)
Translates to: SGQALTASLPYLLAINKALEAAT*AVLSVV
Trigger: CACAACGGACAGAACAGCCCAGGTGGCAGCTTCAAG...AGCTTTATTTATTGCCAAAAGATAGGGCAGACTCGCTGTGAGTGCCTGCCCACT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000105369.8
ENSMUST00000147778.9
ENSMUST00000169546.9
ENSMUST00000170219.9
3UTR-3UTR CCA 90 bp AGTGGGCAGGCACTCACAGCGAGTCTGCCCTATCTTTTGGCAATAAATAAAGCTAATCAACTCAGAATATaGGGCGGCGAGCTCCTCTCT +
Preference number: 2 (lower is better)
Translates to: SGQALTASLPYLLAINKANQLRI*GGELLS
Trigger: AGAGAGGAGCTCGCCGCCCCATATTCTGAGTTGATT...AGCTTTATTTATTGCCAAAAGATAGGGCAGACTCGCTGTGAGTGCCTGCCCACT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000105369.8
ENSMUST00000147778.9
ENSMUST00000169546.9
ENSMUST00000170219.9
3UTR-3UTR CCA 90 bp AAACCCAGAGCAAACAAATATGCAGAGACATTTATGATTAACCAGACAACACGACCAGAGGCTGGGTGCTaGGGTCAACCATATATGGAC +
Preference number: 2 (lower is better)
Translates to: KPRANKYAETFMINQTTRPEAGC*GQPYMD
Trigger: GTCCATATATGGTTGACCCCAGCACCCAGCCTCTGG...TCGTGTTGTCTGGTTAATCATAAATGTCTCTGCATATTTGTTTGCTCTGGGTTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000169546.9
ENSMUST00000170219.9
3UTR GCA 72 bp CGCACGTGTAGGGCGGGCCACTCCAGGGGGCGTGGCTaGACGTGCACCACCGGGGTCGCTGTGCTGCCGTCC +
Preference number: 3 (lower is better)
Translates to: RTCRAGHSRGRG*TCTTGVAVLPS
Trigger: GGACGGCAGCACAGCGACCCCGGTGGTGCACGTGCAGCCACGCCCCCTGGAGTGGCCCGCCCTACACGTGCG
75% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000147778.9
3UTR CCA 72 bp CAGGGCCCCGGCGGGCTCAACGCACAACCCAGAGCCTaGGCAACCACCGCCTCCACCGCCAGGCTCCTCCTC +
Preference number: 3 (lower is better)
Translates to: QGPGGLNAQPRA*ATTASTARLLL
Trigger: GAGGAGGAGCCTGGCGGTGGAGGCGGTGGTTGCCCAGGCTCTGGGTTGTGCGTTGAGCCCGCCGGGGCCCTG
74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000147778.9
3UTR GCA 72 bp AGCAGGTGGAGACTCCGGAGGGGGTGGGAAGGCGGGTaGTGCCCCTCCACCTCCGGAACCCGAGCCCGAGCT +
Preference number: 3 (lower is better)
Translates to: SRWRLRRGWEGG*CPSTSGTRARA
Trigger: AGCTCGGGCTCGGGTTCCGGAGGTGGAGGGGCAGCACCCGCCTTCCCACCCCCTCCGGAGTCTCCACCTGCT
72% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000147778.9
3UTR GCA 72 bp CCGTCTTCTCGTCGATGCTGTAATCGCGGCGCGGCCTaGGTGGCCAGGCTCGCGGGCTGCGGGGAGGACTGC +
Preference number: 3 (lower is better)
Translates to: PSSRRCCNRGAA*VARLAGCGEDC
Trigger: GCAGTCCTCCCCGCAGCCCGCGAGCCTGGCCACGCAGGCCGCGCCGCGATTACAGCATCGACGAGAAGACGG
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000147778.9
3UTR GCA 72 bp TGTAGGGCGGGCCACTCCAGGGGGCGTGGCTGCACGTaGACCACCGGGGTCGCTGTGCTGCCGTCCTCTCTG +
Preference number: 3 (lower is better)
Translates to: CRAGHSRGRGCT*TTGVAVLPSSL
Trigger: CAGAGAGGACGGCAGCACAGCGACCCCGGTGGTGCACGTGCAGCCACGCCCCCTGGAGTGGCCCGCCCTACA
72% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000147778.9
3UTR CCA 72 bp GCGGCGGGCTTCGCCGTCCTTAGGCCTCAAAGCAGGTaGAGACTCCGGAGGGGGTGGGAAGGCGGGTGCTGC +
Preference number: 3 (lower is better)
Translates to: AAGFAVLRPQSR*RLRRGWEGGCC
Trigger: GCAGCACCCGCCTTCCCACCCCCTCCGGAGTCTCCACCTGCTTTGAGGCCTAAGGACGGCGAAGCCCGCCGC
71% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000147778.9
3UTR-3UTR CAA 90 bp GGCTCTCGGGGAGGAATGAGACGGGGAGCCTGTGCACATGCAGAGAGCAGGCGCGGGTCCTGGAGCCTCTaGCTTCCGGAGGCCACTGCG +
Preference number: 3 (lower is better)
Translates to: GSRGGMRRGACAHAESRRGSWSL*LPEATA
Trigger: CGCAGTGGCCTCCGGAAGCAAGAGGCTCCAGGACCC...GCGCCTGCTCTCTGCATGTGCACAGGCTCCCCGTCTCATTCCTCCCCGAGAGCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000105369.8
ENSMUST00000147778.9
ENSMUST00000169546.9
ENSMUST00000170219.9
3UTR TCA 72 bp GCGGGTCCTGCTGCTGCGCATGCTCGGGCCCCAAACTaGTGCCATGCTCCGGAGGAGTCTCAGGGCTCGCTC +
Preference number: 3 (lower is better)
Translates to: AGPAAAHARAPN*CHAPEESQGSL
Trigger: GAGCGAGCCCTGAGACTCCTCCGGAGCATGGCATCAGTTTGGGGCCCGAGCATGCGCAGCAGCAGGACCCGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000147778.9
3UTR TCA 72 bp TCCGGAACCCGAGCCCGAGCTATCGCCGCTGCGCACTaGGTCGCGGTCATTGCCGCTGCTGCTGTGGTCCGA +
Preference number: 3 (lower is better)
Translates to: SGTRARAIAAAH*VAVIAAAAVVR
Trigger: TCGGACCACAGCAGCAGCGGCAATGACCGCGACTCAGTGCGCAGCGGCGATAGCTCGGGCTCGGGTTCCGGA
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000147778.9
3UTR GCA 72 bp TGCTGCTGCGCATGCTCGGGCCCCAAACTGATGCCATaGTCCGGAGGAGTCTCAGGGCTCGCTCCTCCCGCC +
Preference number: 3 (lower is better)
Translates to: CCCACSGPKLMP*SGGVSGLAPPA
Trigger: GGCGGGAGGAGCGAGCCCTGAGACTCCTCCGGAGCATGGCATCAGTTTGGGGCCCGAGCATGCGCAGCAGCA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000147778.9
3UTR GCA 72 bp CTCCACCTCCGGAACCCGAGCCCGAGCTATCGCCGCTaGGCACTGAGTCGCGGTCATTGCCGCTGCTGCTGT +
Preference number: 3 (lower is better)
Translates to: LHLRNPSPSYRR*ALSRGHCRCCC
Trigger: ACAGCAGCAGCGGCAATGACCGCGACTCAGTGCGCAGCGGCGATAGCTCGGGCTCGGGTTCCGGAGGTGGAG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000147778.9
3UTR CCA 72 bp CTTAGGCCTCAAAGCAGGTGGAGACTCCGGAGGGGGTaGGAAGGCGGGTGCTGCCCCTCCACCTCCGGAACC +
Preference number: 3 (lower is better)
Translates to: LRPQSRWRLRRG*EGGCCPSTSGT
Trigger: GGTTCCGGAGGTGGAGGGGCAGCACCCGCCTTCCCACCCCCTCCGGAGTCTCCACCTGCTTTGAGGCCTAAG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000147778.9
3UTR TCA 72 bp GGTGAGGGTTTTCCCAGGGGGCGGCGGCCCTTGTCCTaGGCCTTGCGGCTCTGTTCAAACAGGGCAGCCTCG +
Preference number: 3 (lower is better)
Translates to: GEGFPRGRRPLS*ALRLCSNRAAS
Trigger: CGAGGCTGCCCTGTTTGAACAGAGCCGCAAGGCTCAGGACAAGGGCCGCCGCCCCCTGGGAAAACCCTCACC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000132523.8
3UTR GCA 72 bp GCGTCCTGCTCTTGCTGCGGGTCCTGCTGCTGCGCATaGTCGGGCCCCAAACTGATGCCATGCTCCGGAGGA +
Preference number: 3 (lower is better)
Translates to: ASCSCCGSCCCA*SGPKLMPCSGG
Trigger: TCCTCCGGAGCATGGCATCAGTTTGGGGCCCGAGCATGCGCAGCAGCAGGACCCGCAGCAAGAGCAGGACGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000147778.9
3UTR GCA 72 bp GCATGCTCGGCGTCCTGCTCTTGCTGCGGGTCCTGCTaGTGCGCATGCTCGGGCCCCAAACTGATGCCATGC +
Preference number: 3 (lower is better)
Translates to: ACSASCSCCGSC*CACSGPKLMPC
Trigger: GCATGGCATCAGTTTGGGGCCCGAGCATGCGCAGCAGCAGGACCCGCAGCAAGAGCAGGACGCCGAGCATGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000147778.9
3UTR GCA 72 bp CGCCGCTGCGCACTGAGTCGCGGTCATTGCCGCTGCTaGTGTGGTCCGATGCAGTGGCTGCATGGAGCTCGA +
Preference number: 3 (lower is better)
Translates to: RRCALSRGHCRC*CGPMQWLHGAR
Trigger: TCGAGCTCCATGCAGCCACTGCATCGGACCACAGCAGCAGCGGCAATGACCGCGACTCAGTGCGCAGCGGCG
67% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000147778.9
3UTR TCA 72 bp GAGCCTTGCGGCTCTGTTCAAACAGGGCAGCCTCGTTaGAGGACACGCGGCGGCCGGTGGAGCTGGTGGCTA +
Preference number: 3 (lower is better)
Translates to: EPCGSVQTGQPR*RTRGGRWSWWL
Trigger: TAGCCACCAGCTCCACCGGCCGCCGCGTGTCCTTCAACGAGGCTGCCCTGTTTGAACAGAGCCGCAAGGCTC
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000132523.8
ENSMUST00000147778.9
3UTR TCA 72 bp GGGAAGGCCACCGAGTCGCCTGCGCTGGCAATGTACTaGATGAAGTCGGCATGGGGGACGTCCCCCTCCTGC +
Preference number: 3 (lower is better)
Translates to: GKATESPALAMY*MKSAWGTSPSC
Trigger: GCAGGAGGGGGACGTCCCCCATGCCGACTTCATTCAGTACATTGCCAGCGCAGGCGACTCGGTGGCCTTCCC
65% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENSMUST00000147778.9
3UTR GCA 72 bp TGTGCATGCTCGGCGTCCTGCTCTTGCTGCGGGTCCTaGTGCTGCGCATGCTCGGGCCCCAAACTGATGCCA +
Preference number: 3 (lower is better)
Translates to: CACSASCSCCGS*CCACSGPKLMP
Trigger: TGGCATCAGTTTGGGGCCCGAGCATGCGCAGCAGCAGGACCCGCAGCAAGAGCAGGACGCCGAGCATGCACA
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000147778.9
3UTR GCA 72 bp CCGAGCTATCGCCGCTGCGCACTGAGTCGCGGTCATTaGCGCTGCTGCTGTGGTCCGATGCAGTGGCTGCAT +
Preference number: 3 (lower is better)
Translates to: PSYRRCALSRGH*RCCCGPMQWLH
Trigger: ATGCAGCCACTGCATCGGACCACAGCAGCAGCGGCAATGACCGCGACTCAGTGCGCAGCGGCGATAGCTCGG
65% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000147778.9
3UTR CCA 72 bp CGCGGTCATTGCCGCTGCTGCTGTGGTCCGATGCAGTaGCTGCATGGAGCTCGAGCGAAGCACGAAGGCTCC +
Preference number: 3 (lower is better)
Translates to: RGHCRCCCGPMQ*LHGARAKHEGS
Trigger: GGAGCCTTCGTGCTTCGCTCGAGCTCCATGCAGCCACTGCATCGGACCACAGCAGCAGCGGCAATGACCGCG
65% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000147778.9
3UTR CCA 72 bp CAGCAAGACGGGGAGAGAAGAGTCTCTCGTCGAGGCTaGCTGCTAGCTTGTCTAGCAGGGCCCCGGCGGGCT +
Preference number: 3 (lower is better)
Translates to: QQDGERRVSRRG*LLACLAGPRRA
Trigger: AGCCCGCCGGGGCCCTGCTAGACAAGCTAGCAGCCAGCCTCGACGAGAGACTCTTCTCTCCCCGTCTTGCTG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000147778.9
3UTR-3UTR CAA 90 bp TCAGCTGATCCTGGAGGGAGGCTGCACATGCACCTCAGAACCTGCTCCACCAGCGGGTCCTGGAGCCTCTaGCTTCCGGAGGCCACTGCG +
Preference number: 3 (lower is better)
Translates to: SADPGGRLHMHLRTCSTSGSWSL*LPEATA
Trigger: CGCAGTGGCCTCCGGAAGCAAGAGGCTCCAGGACCC...GCTGGTGGAGCAGGTTCTGAGGTGCATGTGCAGCCTCCCTCCAGGATCAGCTGA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000105369.8
ENSMUST00000147778.9
ENSMUST00000169546.9
ENSMUST00000170219.9
3UTR-3UTR CAA 90 bp GCCAGAGGCTGGGTGCTGGGGTCAACCATATATGGACCGGAGAGTCCAGTCTCGAACAGGGCAGCCTCGTaGAAGGACACGCGGCGGCCG +
Preference number: 3 (lower is better)
Translates to: ARGWVLGSTIYGPESPVSNRAAS*KDTRRP
Trigger: CGGCCGCCGCGTGTCCTTCAACGAGGCTGCCCTGTT...CGAGACTGGACTCTCCGGTCCATATATGGTTGACCCCAGCACCCAGCCTCTGGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000147778.9
3UTR TCA 72 bp TCCCCTTCTGTCAGGGTGTACCGGCGGCCCTTGTCCTaGGCCTTGCGGCTCTGTTCAAACAGGGCAGCCTCG +
Preference number: 3 (lower is better)
Translates to: SPSVRVYRRPLS*ALRLCSNRAAS
Trigger: CGAGGCTGCCCTGTTTGAACAGAGCCGCAAGGCTCAGGACAAGGGCCGCCGGTACACCCTGACAGAAGGGGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000147778.9
3UTR TCA 72 bp AGGCCACCGAGTCGCCTGCGCTGGCAATGTACTGAATaGAGTCGGCATGGGGGACGTCCCCCTCCTGCTCCA +
Preference number: 3 (lower is better)
Translates to: RPPSRLRWQCTE*SRHGGRPPPAP
Trigger: TGGAGCAGGAGGGGGACGTCCCCCATGCCGACTTCATTCAGTACATTGCCAGCGCAGGCGACTCGGTGGCCT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENSMUST00000147778.9
3UTR GCA 72 bp AGCACGAAGGCTCCACAGGTCACGGTAGCTGCACTGTaGATGCTCGGCGTCCTGCTCTTGCTGCGGGTCCTG +
Preference number: 3 (lower is better)
Translates to: STKAPQVTVAAL*MLGVLLLLRVL
Trigger: CAGGACCCGCAGCAAGAGCAGGACGCCGAGCATGCACAGTGCAGCTACCGTGACCTGTGGAGCCTTCGTGCT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000147778.9
3UTR GCA 72 bp CGAGCGAAGCACGAAGGCTCCACAGGTCACGGTAGCTaGACTGTGCATGCTCGGCGTCCTGCTCTTGCTGCG +
Preference number: 3 (lower is better)
Translates to: RAKHEGSTGHGS*TVHARRPALAA
Trigger: CGCAGCAAGAGCAGGACGCCGAGCATGCACAGTGCAGCTACCGTGACCTGTGGAGCCTTCGTGCTTCGCTCG
64% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000147778.9
3UTR GCA 72 bp TATCGCCGCTGCGCACTGAGTCGCGGTCATTGCCGCTaGTGCTGTGGTCCGATGCAGTGGCTGCATGGAGCT +
Preference number: 3 (lower is better)
Translates to: YRRCALSRGHCR*CCGPMQWLHGA
Trigger: AGCTCCATGCAGCCACTGCATCGGACCACAGCAGCAGCGGCAATGACCGCGACTCAGTGCGCAGCGGCGATA
64% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000147778.9
3UTR CCA 72 bp CTGCGCACTGAGTCGCGGTCATTGCCGCTGCTGCTGTaGTCCGATGCAGTGGCTGCATGGAGCTCGAGCGAA +
Preference number: 3 (lower is better)
Translates to: LRTESRSLPLLL*SDAVAAWSSSE
Trigger: TTCGCTCGAGCTCCATGCAGCCACTGCATCGGACCACAGCAGCAGCGGCAATGACCGCGACTCAGTGCGCAG
64% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000147778.9
3UTR CCA 72 bp TCCACCGCCAGGCTCCTCCTCGATGACAGGAATGGATaGGTCATCACCCGTGATGGGCAGCGCACGGCCTTC +
Preference number: 3 (lower is better)
Translates to: STARLLLDDRNG*VITRDGQRTAF
Trigger: GAAGGCCGTGCGCTGCCCATCACGGGTGATGACCCATCCATTCCTGTCATCGAGGAGGAGCCTGGCGGTGGA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000147778.9
3UTR-3UTR CAA 90 bp AAAGAGCGTCCGTCTTCTCGTCGATGCTGTAATCGCGGCGCGGCCTGCGTGGCCATAGCCAAGCTGTCCTaGGAGGTGGTAGCTGGGTGG +
Preference number: 3 (lower is better)
Translates to: KERPSSRRCCNRGAACVAIAKLS*EVVAGW
Trigger: CCACCCAGCTACCACCTCCAAGGACAGCTTGGCTAT...GGCCACGCAGGCCGCGCCGCGATTACAGCATCGACGAGAAGACGGACGCTCTTT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000147778.9
3UTR TCA 72 bp CCGTTGTGTCCAAAGCCCAAGGCTCTCGGGGAGGAATaGGACGGGGAGCCTGTGCACATGCAGAGAGCAGGC +
Preference number: 3 (lower is better)
Translates to: PLCPKPKALGEE*DGEPVHMQRAG
Trigger: GCCTGCTCTCTGCATGTGCACAGGCTCCCCGTCTCATTCCTCCCCGAGAGCCTTGGGCTTTGGACACAACGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000105369.8
ENSMUST00000147778.9
ENSMUST00000169546.9
ENSMUST00000170219.9
3UTR TCA 72 bp TCCTGCTCCATGCTCTCACTGGCTGCCCGCTGCCGCTaGAAGTGGTGCCTCTTAGGGGAACCTCTCGTGTCC +
Preference number: 3 (lower is better)
Translates to: SCSMLSLAARCR*KWCLLGEPLVS
Trigger: GGACACGAGAGGTTCCCCTAAGAGGCACCACTTTCAGCGGCAGCGGGCAGCCAGTGAGAGCATGGAGCAGGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000147778.9
3UTR GCA 72 bp CGCTGTTGCCACCATTCCCACAGCAGCCCCATGTGCTaGCGGAGAAGCAGCAGAGAGGCAGGTCCAGTACAG +
Preference number: 3 (lower is better)
Translates to: RCCHHSHSSPMC*RRSSREAGPVQ
Trigger: CTGTACTGGACCTGCCTCTCTGCTGCTTCTCCGGCAGCACATGGGGCTGCTGTGGGAATGGTGGCAACAGCG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000105369.8
ENSMUST00000147778.9
ENSMUST00000169546.9
ENSMUST00000170219.9
3UTR GCA 72 bp GTGGAGGGTCAGCTGATCCTGGAGGGAGGCTGCACATaGACCTCAGAACCTGCTCCACCAGCATCTGTGGCC +
Preference number: 3 (lower is better)
Translates to: VEGQLILEGGCT*TSEPAPPASVA
Trigger: GGCCACAGATGCTGGTGGAGCAGGTTCTGAGGTGCATGTGCAGCCTCCCTCCAGGATCAGCTGACCCTCCAC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000105369.8
ENSMUST00000147778.9
ENSMUST00000169546.9
ENSMUST00000170219.9
3UTR GCA 72 bp CCAAGGCTCTCGGGGAGGAATGAGACGGGGAGCCTGTaGACATGCAGAGAGCAGGCGCGGTCGGTTATTGCT +
Preference number: 3 (lower is better)
Translates to: PRLSGRNETGSL*TCREQARSVIA
Trigger: AGCAATAACCGACCGCGCCTGCTCTCTGCATGTGCACAGGCTCCCCGTCTCATTCCTCCCCGAGAGCCTTGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000105369.8
ENSMUST00000147778.9
ENSMUST00000169546.9
ENSMUST00000170219.9
3UTR GCA 72 bp TCCAGGCTGGCATGTCGGCGTAGCCGAGTGAAGAATTaGAAAACAGTGCCCGACCCGGAGGAGCCTGTGCCC +
Preference number: 3 (lower is better)
Translates to: SRLACRRSRVKN*KTVPDPEEPVP
Trigger: GGGCACAGGCTCCTCCGGGTCGGGCACTGTTTTGCAATTCTTCACTCGGCTACGCCGACATGCCAGCCTGGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000147778.9
3UTR GCA 72 bp GTCATTGCCGCTGCTGCTGTGGTCCGATGCAGTGGCTaGATGGAGCTCGAGCGAAGCACGAAGGCTCCACAG +
Preference number: 3 (lower is better)
Translates to: VIAAAAVVRCSG*MELERSTKAPQ
Trigger: CTGTGGAGCCTTCGTGCTTCGCTCGAGCTCCATGCAGCCACTGCATCGGACCACAGCAGCAGCGGCAATGAC
62% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000147778.9
3UTR GCA 72 bp GTTCTGAAACTTCGTCGCCTGCTCCGCGCCCCTCGATaGTCGCATAGCCACTGTCCATCTGTAGCAGGCGGC +
Preference number: 3 (lower is better)
Translates to: VLKLRRLLRAPR*SHSHCPSVAGG
Trigger: GCCGCCTGCTACAGATGGACAGTGGCTATGCGAGCATCGAGGGGCGCGGAGCAGGCGACGAAGTTTCAGAAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000147778.9
3UTR GCA 72 bp GGAACTCATGGAAAAGAGCGTCCGTCTTCTCGTCGATaGTGTAATCGCGGCGCGGCCTGCGTGGCCAGGCTC +
Preference number: 3 (lower is better)
Translates to: GTHGKERPSSRR*CNRGAACVARL
Trigger: GAGCCTGGCCACGCAGGCCGCGCCGCGATTACAGCATCGACGAGAAGACGGACGCTCTTTTCCATGAGTTCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000147778.9
3UTR CCA 72 bp TTGCCGCTGCTGCTGTGGTCCGATGCAGTGGCTGCATaGAGCTCGAGCGAAGCACGAAGGCTCCACAGGTCA +
Preference number: 3 (lower is better)
Translates to: LPLLLWSDAVAA*SSSEARRLHRS
Trigger: TGACCTGTGGAGCCTTCGTGCTTCGCTCGAGCTCCATGCAGCCACTGCATCGGACCACAGCAGCAGCGGCAA
62% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000147778.9
3UTR-3UTR CAA 90 bp AACTTGAAGCTGCCACCTGGGCTGTTCTGTCCGTTGTGTCCAAAGCCCAAGGCTGGGTCCTGGAGCCTCTaGCTTCCGGAGGCCACTGCG +
Preference number: 3 (lower is better)
Translates to: NLKLPPGLFCPLCPKPKAGSWSL*LPEATA
Trigger: CGCAGTGGCCTCCGGAAGCAAGAGGCTCCAGGACCC...AGCCTTGGGCTTTGGACACAACGGACAGAACAGCCCAGGTGGCAGCTTCAAGTT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000105369.8
ENSMUST00000147778.9
ENSMUST00000169546.9
ENSMUST00000170219.9
3UTR-3UTR CAA 90 bp GGAAACTTGAAGCTGCCACCTGGGCTGTTCTGTCCGTTGTGTCCAAAGCCCAAGGGGTCCTGGAGCCTCTaGCTTCCGGAGGCCACTGCG +
Preference number: 3 (lower is better)
Translates to: GNLKLPPGLFCPLCPKPKGSWSL*LPEATA
Trigger: CGCAGTGGCCTCCGGAAGCAAGAGGCTCCAGGACCC...CTTGGGCTTTGGACACAACGGACAGAACAGCCCAGGTGGCAGCTTCAAGTTTCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000105369.8
ENSMUST00000147778.9
ENSMUST00000169546.9
ENSMUST00000170219.9
3UTR TCA 72 bp TGGCTCCATCCAGGCTGGCATGTCGGCGTAGCCGAGTaGAGAATTGCAAAACAGTGCCCGACCCGGAGGAGC +
Preference number: 3 (lower is better)
Translates to: WLHPGWHVGVAE*RIAKQCPTRRS
Trigger: GCTCCTCCGGGTCGGGCACTGTTTTGCAATTCTTCACTCGGCTACGCCGACATGCCAGCCTGGATGGAGCCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000147778.9
3UTR GCA 72 bp TATGTGCACACTTGGGATTTGGGGGCCGTGTACCCATaGACGGCCACCTCAGGTTGCTCCCGCTGTTGCCAC +
Preference number: 3 (lower is better)
Translates to: YVHTWDLGAVYP*TATSGCSRCCH
Trigger: GTGGCAACAGCGGGAGCAACCTGAGGTGGCCGTGCATGGGTACACGGCCCCCAAATCCCAAGTGTGCACATA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENSMUST00000105369.8
ENSMUST00000147778.9
ENSMUST00000169546.9
ENSMUST00000170219.9
3UTR GCA 72 bp AGAATTGCAAAACAGTGCCCGACCCGGAGGAGCCTGTaGCCATCTCCCCAGGCACTGTTTCAGGCCCAGCAG +
Preference number: 3 (lower is better)
Translates to: RIAKQCPTRRSL*PSPQALFQAQQ
Trigger: CTGCTGGGCCTGAAACAGTGCCTGGGGAGATGGGCACAGGCTCCTCCGGGTCGGGCACTGTTTTGCAATTCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000147778.9
3UTR CCA 72 bp GCGCTAAGTGCCCAGGGGACACTATATGTGCACACTTaGGATTTGGGGGCCGTGTACCCATGCACGGCCACC +
Preference number: 3 (lower is better)
Translates to: ALSAQGTLYVHT*DLGAVYPCTAT
Trigger: GGTGGCCGTGCATGGGTACACGGCCCCCAAATCCCAAGTGTGCACATATAGTGTCCCCTGGGCACTTAGCGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENSMUST00000105369.8
ENSMUST00000147778.9
ENSMUST00000169546.9
ENSMUST00000170219.9
3UTR CCA 72 bp CCATCTCCCCAGGCACTGTTTCAGGCCCAGCAGCCTTaGCACCCCGGGTACCTGCATCTAACGAAATGCCCT +
Preference number: 3 (lower is better)
Translates to: PSPQALFQAQQP*HPGYLHLTKCP
Trigger: AGGGCATTTCGTTAGATGCAGGTACCCGGGGTGCCAAGGCTGCTGGGCCTGAAACAGTGCCTGGGGAGATGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000147778.9
3UTR TCA 72 bp TTACTGCCTGCCAGTGCTCACGAGTGGAGGGTCAGCTaGTCCTGGAGGGAGGCTGCACATGCACCTCAGAAC +
Preference number: 3 (lower is better)
Translates to: LLPASAHEWRVS*SWREAAHAPQN
Trigger: GTTCTGAGGTGCATGTGCAGCCTCCCTCCAGGATCAGCTGACCCTCCACTCGTGAGCACTGGCAGGCAGTAA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000105369.8
ENSMUST00000147778.9
ENSMUST00000169546.9
ENSMUST00000170219.9
3UTR GCA 72 bp AACCTGCTCCACCAGCATCTGTGGCCAGAGGCTGGGTaGTGGGGTCAACCATATATGGACCGGAGAGTCCAG +
Preference number: 3 (lower is better)
Translates to: NLLHQHLWPEAG*WGQPYMDRRVQ
Trigger: CTGGACTCTCCGGTCCATATATGGTTGACCCCAGCACCCAGCCTCTGGCCACAGATGCTGGTGGAGCAGGTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000105369.8
ENSMUST00000147778.9
ENSMUST00000169546.9
ENSMUST00000170219.9
3UTR CCA 72 bp TGTGGCCAGAGGCTGGGTGCTGGGGTCAACCATATATaGACCGGAGAGTCCAGTCTCGTCATCCTCCCTGCA +
Preference number: 3 (lower is better)
Translates to: CGQRLGAGVNHI*TGESSLVILPA
Trigger: TGCAGGGAGGATGACGAGACTGGACTCTCCGGTCCATATATGGTTGACCCCAGCACCCAGCCTCTGGCCACA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000105369.8
ENSMUST00000147778.9
ENSMUST00000169546.9
ENSMUST00000170219.9
3UTR-3UTR CAA 90 bp CACTCATGGATAGTAGCGATTTTGAGGGGCGGTAGGTGGAGGTGGGTGAGGCGGATAGCCAAGCTGTCCTaGGAGGTGGTAGCTGGGTGG +
Preference number: 3 (lower is better)
Translates to: HSWIVAILRGGRWRWVRRIAKLS*EVVAGW
Trigger: CCACCCAGCTACCACCTCCAAGGACAGCTTGGCTAT...CCGCCTCACCCACCTCCACCTACCGCCCCTCAAAATCGCTACTATCCATGAGTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000123967.2
ENSMUST00000147778.9
3UTR CCA 72 bp TCAGAACCTGCTCCACCAGCATCTGTGGCCAGAGGCTaGGTGCTGGGGTCAACCATATATGGACCGGAGAGT +
Preference number: 3 (lower is better)
Translates to: SEPAPPASVARG*VLGSTIYGPES
Trigger: ACTCTCCGGTCCATATATGGTTGACCCCAGCACCCAGCCTCTGGCCACAGATGCTGGTGGAGCAGGTTCTGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000105369.8
ENSMUST00000147778.9
ENSMUST00000169546.9
ENSMUST00000170219.9
3UTR GCA 72 bp CCTGTGCACATGCAGAGAGCAGGCGCGGTCGGTTATTaGTCAGAGAGGAAAGGTAGAGCGCATACCATGGAC +
Preference number: 3 (lower is better)
Translates to: PVHMQRAGAVGY*SERKGRAHTMD
Trigger: GTCCATGGTATGCGCTCTACCTTTCCTCTCTGAGCAATAACCGACCGCGCCTGCTCTCTGCATGTGCACAGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000105369.8
ENSMUST00000147778.9
ENSMUST00000169546.9
ENSMUST00000170219.9
3UTR GCA 72 bp ATGAGTGTGAGGATGTGCACGTGTGCGGTGACGCGGTaGATCGTCAAAATGAGGGTCATGGCGCAGGAACTC +
Preference number: 3 (lower is better)
Translates to: MSVRMCTCAVTR*IVKMRVMAQEL
Trigger: GAGTTCCTGCGCCATGACCCTCATTTTGACGATGCACCGCGTCACCGCACACGTGCACATCCTCACACTCAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000147778.9
3UTR-3UTR CAA 90 bp GGCTCTCGGGGAGGAATGAGACGGGGAGCCTGTGCACATGCAGAGAGCAGGCGCAGTCTGCCCTATCTTTaGGCAATAAATAAAGCTTGG +
Preference number: 3 (lower is better)
Translates to: GSRGGMRRGACAHAESRRSLPYL*AINKAW
Trigger: CCAAGCTTTATTTATTGCCAAAAGATAGGGCAGACT...GCGCCTGCTCTCTGCATGTGCACAGGCTCCCCGTCTCATTCCTCCCCGAGAGCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000105369.8
ENSMUST00000147778.9
ENSMUST00000169546.9
ENSMUST00000170219.9
3UTR GCA 72 bp ATTGCTTCCGCGCATGAGTGTGAGGATGTGCACGTGTaGGGTGACGCGGTGCATCGTCAAAATGAGGGTCAT +
Preference number: 3 (lower is better)
Translates to: IASAHECEDVHV*GDAVHRQNEGH
Trigger: ATGACCCTCATTTTGACGATGCACCGCGTCACCGCACACGTGCACATCCTCACACTCATGCGCGGAAGCAAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000147778.9
3UTR CCA 72 bp TTAGGGGAACCTCTCGTGTCCAGACTGGACGCTCTCTaGCTGGGCTCCAGCTTCCATTTCTTGACCTTGAAG +
Preference number: 3 (lower is better)
Translates to: LGEPLVSRLDAL*LGSSFHFLTLK
Trigger: CTTCAAGGTCAAGAAATGGAAGCTGGAGCCCAGCCAGAGAGCGTCCAGTCTGGACACGAGAGGTTCCCCTAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000147778.9
3UTR-3UTR CAA 90 bp AGTGGGCAGGCACTCACAGCGAGTCTGCCCTATCTTTTGGCAATAAATAAAGCTTCATCCTCCCTGCAGTaGAGCCTGGGTCCTGGAGCC +
Preference number: 3 (lower is better)
Translates to: SGQALTASLPYLLAINKASSSLQ*SLGPGA
Trigger: GGCTCCAGGACCCAGGCTCAACTGCAGGGAGGATGA...AGCTTTATTTATTGCCAAAAGATAGGGCAGACTCGCTGTGAGTGCCTGCCCACT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000105369.8
ENSMUST00000147778.9
ENSMUST00000169546.9
ENSMUST00000170219.9
3UTR CCA 72 bp GGGTGTTTGGAAATATGGAGCAGGCGGGGCACAGGGTaGCCTGCAGAGAAAACCCAGAGCAAACAAATATGC +
Preference number: 3 (lower is better)
Translates to: GCLEIWSRRGTG*PAEKTQSKQIC
Trigger: GCATATTTGTTTGCTCTGGGTTTTCTCTGCAGGCCACCCTGTGCCCCGCCTGCTCCATATTTCCAAACACCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000169546.9
ENSMUST00000170219.9
3UTR-3UTR CAA 90 bp GGAGCCTGTGCACATGCAGAGAGCAGGCGCGGTCGGTTATTGCTCAGAGAGGAAAGTCTGCCCTATCTTTaGGCAATAAATAAAGCTTGG +
Preference number: 3 (lower is better)
Translates to: GACAHAESRRGRLLLREESLPYL*AINKAW
Trigger: CCAAGCTTTATTTATTGCCAAAAGATAGGGCAGACT...TTCCTCTCTGAGCAATAACCGACCGCGCCTGCTCTCTGCATGTGCACAGGCTCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000105369.8
ENSMUST00000147778.9
ENSMUST00000169546.9
ENSMUST00000170219.9
3UTR TCA 72 bp CCCTATCTTTTGGCAATAAATAAAGCTTGGGAAACTTaGAGCTGCCACCTGGGCTGTTCTGTCCGTTGTGTC +
Preference number: 3 (lower is better)
Translates to: PYLLAINKAWET*SCHLGCSVRCV
Trigger: GACACAACGGACAGAACAGCCCAGGTGGCAGCTTCAAGTTTCCCAAGCTTTATTTATTGCCAAAAGATAGGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000105369.8
ENSMUST00000147778.9
ENSMUST00000169546.9
ENSMUST00000170219.9
3UTR TCA 72 bp GAAAACCCAGAGCAAACAAATATGCAGAGACATTTATaGTTAACCAGACAACACGACCAACCACAGAGGGCG +
Preference number: 3 (lower is better)
Translates to: ENPEQTNMQRHL*LTRQHDQPQRA
Trigger: CGCCCTCTGTGGTTGGTCGTGTTGTCTGGTTAATCATAAATGTCTCTGCATATTTGTTTGCTCTGGGTTTTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000169546.9
ENSMUST00000170219.9
CDS-3UTR CCA 90 bp GGGCCGACTGAGTGGCCGGTGAGGGTTTTCCCAGGGGGCGGCGGCCCTTGTCCTCCGCCGTGGGGCGGCTaGTGGCATTGTCCCACGAAG +
Preference number: 4 (lower is better)
Translates to: GPTEWPVRVFPGGGGPCPPPWGG*WHCPTK
Trigger: CTTCGTGGGACAATGCCACCAGCCGCCCCACGGCGG...AGGACAAGGGCCGCCGCCCCCTGGGAAAACCCTCACCGGCCACTCAGTCGGCCC
71% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000132523.8
CDS-3UTR CCA 90 bp AAGGCGGGTGCTGCCCCTCCACCTCCGGAACCCGAGCCCGAGCTATCGCCGCTGGCCCTGTTGAAGCGCTaGTGCACCTCCCAGCAGCGT +
Preference number: 4 (lower is better)
Translates to: KAGAAPPPPEPEPELSPLALLKR*CTSQQR
Trigger: ACGCTGCTGGGAGGTGCACCAGCGCTTCAACAGGGC...CAGCGGCGATAGCTCGGGCTCGGGTTCCGGAGGTGGAGGGGCAGCACCCGCCTT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000147778.9
CDS-3UTR CCA 90 bp CTCTCGGGGAGGAATGAGACGGGGAGCCTGTGCACATGCAGAGAGCAGGCGCGGAGACTCCGGAGGGGGTaGGAAGGCGGGTGCTGCCCC +
Preference number: 4 (lower is better)
Translates to: LSGRNETGSLCTCREQARRLRRG*EGGCCP
Trigger: GGGGCAGCACCCGCCTTCCCACCCCCTCCGGAGTCT...CCGCGCCTGCTCTCTGCATGTGCACAGGCTCCCCGTCTCATTCCTCCCCGAGAG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENSMUST00000105369.8
ENSMUST00000169546.9
ENSMUST00000170219.9
CDS-3UTR TCA 90 bp CTCTCGGGGAGGAATGAGACGGGGAGCCTGTGCACATGCAGAGAGCAGGCGCGGGGAGCTGGGGCCGACTaGGTGGCCGGTGAGGGTTTT +
Preference number: 4 (lower is better)
Translates to: LSGRNETGSLCTCREQARGAGAD*VAGEGF
Trigger: AAAACCCTCACCGGCCACTCAGTCGGCCCCAGCTCC...CCGCGCCTGCTCTCTGCATGTGCACAGGCTCCCCGTCTCATTCCTCCCCGAGAG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENSMUST00000105369.8
ENSMUST00000169546.9
ENSMUST00000170219.9
CDS-3UTR GCA 90 bp CTCTCGGGGAGGAATGAGACGGGGAGCCTGTGCACATGCAGAGAGCAGGCGCGGTCGGCGTCCTGCTCTTaGTGCGGGTCCTGCTGCTGC +
Preference number: 4 (lower is better)
Translates to: LSGRNETGSLCTCREQARSASCS*CGSCCC
Trigger: GCAGCAGCAGGACCCGCAGCAAGAGCAGGACGCCGA...CCGCGCCTGCTCTCTGCATGTGCACAGGCTCCCCGTCTCATTCCTCCCCGAGAG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000105369.8
ENSMUST00000169546.9
ENSMUST00000170219.9
CDS-3UTR GCA 90 bp CTCTCGGGGAGGAATGAGACGGGGAGCCTGTGCACATGCAGAGAGCAGGCGCGGGGCTGCGGGGAGGACTaGGGGCTGGAGCAGGAAGTT +
Preference number: 4 (lower is better)
Translates to: LSGRNETGSLCTCREQARGCGED*GLEQEV
Trigger: AACTTCCTGCTCCAGCCCGCAGTCCTCCCCGCAGCC...CCGCGCCTGCTCTCTGCATGTGCACAGGCTCCCCGTCTCATTCCTCCCCGAGAG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 20 nt.
Matches the following 3 transcripts:
ENSMUST00000105369.8
ENSMUST00000169546.9
ENSMUST00000170219.9
CDS-3UTR CCA 90 bp GGGGCGGCGGCCCTTGTCCTGAGCCTTGCGGCTCTGTTCAAACAGGGCAGCCTCGCCCTGTTGAAGCGCTaGTGCACCTCCCAGCAGCGT +
Preference number: 4 (lower is better)
Translates to: GAAALVLSLAALFKQGSLALLKR*CTSQQR
Trigger: ACGCTGCTGGGAGGTGCACCAGCGCTTCAACAGGGC...GAGGCTGCCCTGTTTGAACAGAGCCGCAAGGCTCAGGACAAGGGCCGCCGCCCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000132523.8
CDS-3UTR CCA 90 bp GGCTCTCGGGGAGGAATGAGACGGGGAGCCTGTGCACATGCAGAGAGCAGGCGCGAGGTGGTAGCTGGGTaGGGTGTGGCCGCTGCACTG +
Preference number: 4 (lower is better)
Translates to: GSRGGMRRGACAHAESRREVVAG*GVAAAL
Trigger: CAGTGCAGCGGCCACACCCCACCCAGCTACCACCTC...GCGCCTGCTCTCTGCATGTGCACAGGCTCCCCGTCTCATTCCTCCCCGAGAGCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000105369.8
ENSMUST00000169546.9
ENSMUST00000170219.9
3UTR CAA 72 bp CCCGAGCTATCGCCGCTGCGCACTGAGTCGCGGTCATaGCCGCTGCTGCTGTGGTCCGATGCAGTGGCTGCA +
Preference number: 4 (lower is better)
Translates to: PELSPLRTESRS*PLLLWSDAVAA
Trigger: TGCAGCCACTGCATCGGACCACAGCAGCAGCGGCAATGACCGCGACTCAGTGCGCAGCGGCGATAGCTCGGG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000147778.9
CDS-3UTR TCA 90 bp CTGTTCAAACAGGGCAGCCTCGTTGAAGGACACGCGGCGGCCGGTGGAGCTGGTCCTCCATGGCCCTGTTaGAGCGCTGGTGCACCTCCC +
Preference number: 4 (lower is better)
Translates to: LFKQGSLVEGHAAAGGAGPPWPC*SAGAPP
Trigger: GGGAGGTGCACCAGCGCTTCAACAGGGCCATGGAGG...ACCAGCTCCACCGGCCGCCGCGTGTCCTTCAACGAGGCTGCCCTGTTTGAACAG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000132523.8
ENSMUST00000147778.9
CDS-3UTR TCA 90 bp AAAGAGCGTCCGTCTTCTCGTCGATGCTGTAATCGCGGCGCGGCCTGCGTGGCCCCTCCATGGCCCTGTTaGAGCGCTGGTGCACCTCCC +
Preference number: 4 (lower is better)
Translates to: KERPSSRRCCNRGAACVAPPWPC*SAGAPP
Trigger: GGGAGGTGCACCAGCGCTTCAACAGGGCCATGGAGG...GGCCACGCAGGCCGCGCCGCGATTACAGCATCGACGAGAAGACGGACGCTCTTT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000147778.9
CDS-3UTR TCA 90 bp GGCCGTGTACCCATGCACGGCCACCTCAGGTTGCTCCCGCTGTTGCCACCATTCGCTGCCCGCTGCCGCTaGAAGTGGTGCCTCTTAGGG +
Preference number: 4 (lower is better)
Translates to: GRVPMHGHLRLLPLLPPFAARCR*KWCLLG
Trigger: CCCTAAGAGGCACCACTTTCAGCGGCAGCGGGCAGC...GAATGGTGGCAACAGCGGGAGCAACCTGAGGTGGCCGTGCATGGGTACACGGCC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000105369.8
ENSMUST00000169546.9
ENSMUST00000170219.9
CDS-3UTR GCA 90 bp CTCTCGGGGAGGAATGAGACGGGGAGCCTGTGCACATGCAGAGAGCAGGCGCGGCTCCGCGCCCCTCGATaGTCGCATAGCCACTGTCCA +
Preference number: 4 (lower is better)
Translates to: LSGRNETGSLCTCREQARLRAPR*SHSHCP
Trigger: TGGACAGTGGCTATGCGAGCATCGAGGGGCGCGGAG...CCGCGCCTGCTCTCTGCATGTGCACAGGCTCCCCGTCTCATTCCTCCCCGAGAG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENSMUST00000105369.8
ENSMUST00000169546.9
ENSMUST00000170219.9
CDS-3UTR CCA 90 bp AAACTGATGCCATGCTCCGGAGGAGTCTCAGGGCTCGCTCCTCCCGCCGCCTCTCCGTGGGGCGGCTGGTaGCATTGTCCCACGAAGTCG +
Preference number: 4 (lower is better)
Translates to: KLMPCSGGVSGLAPPAASPWGGW*HCPTKS
Trigger: CGACTTCGTGGGACAATGCCACCAGCCGCCCCACGG...AGAGGCGGCGGGAGGAGCGAGCCCTGAGACTCCTCCGGAGCATGGCATCAGTTT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000147778.9
CDS-3UTR CCA 90 bp GGCTCTCGGGGAGGAATGAGACGGGGAGCCTGTGCACATGCAGAGAGCAGGCGCTGGCTCCATCCAGGCTaGCATGTCGGCGTAGCCGAG +
Preference number: 4 (lower is better)
Translates to: GSRGGMRRGACAHAESRRWLHPG*HVGVAE
Trigger: CTCGGCTACGCCGACATGCCAGCCTGGATGGAGCCA...GCGCCTGCTCTCTGCATGTGCACAGGCTCCCCGTCTCATTCCTCCCCGAGAGCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000105369.8
ENSMUST00000169546.9
ENSMUST00000170219.9
CDS-3UTR CCA 90 bp GGCTCTCGGGGAGGAATGAGACGGGGAGCCTGTGCACATGCAGAGAGCAGGCGCAGGCCTCAAAGCAGGTaGAGACTCCGGAGGGGGTGG +
Preference number: 4 (lower is better)
Translates to: GSRGGMRRGACAHAESRRRPQSR*RLRRGW
Trigger: CCACCCCCTCCGGAGTCTCCACCTGCTTTGAGGCCT...GCGCCTGCTCTCTGCATGTGCACAGGCTCCCCGTCTCATTCCTCCCCGAGAGCC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENSMUST00000105369.8
ENSMUST00000169546.9
ENSMUST00000170219.9
CDS-3UTR CCA 90 bp GGAAATCCCCTTCTGTCAGGGTGTACCGGCGGCCCTTGTCCTGAGCCTTGCGGCTCTCTGCTTCCTCCATaGCCCGTGGGGCGGCTGGTG +
Preference number: 4 (lower is better)
Translates to: GNPLLSGCTGGPCPEPCGSLLPP*PVGRLV
Trigger: CACCAGCCGCCCCACGGGCCATGGAGGAAGCAGAGA...GCCGCAAGGCTCAGGACAAGGGCCGCCGGTACACCCTGACAGAAGGGGATTTCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000123967.2
3UTR CAA 72 bp GTACCCATGCACGGCCACCTCAGGTTGCTCCCGCTGTaGCCACCATTCCCACAGCAGCCCCATGTGCTGCCG +
Preference number: 4 (lower is better)
Translates to: VPMHGHLRLLPL*PPFPQQPHVLP
Trigger: CGGCAGCACATGGGGCTGCTGTGGGAATGGTGGCAACAGCGGGAGCAACCTGAGGTGGCCGTGCATGGGTAC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000105369.8
ENSMUST00000147778.9
ENSMUST00000169546.9
ENSMUST00000170219.9
3UTR CAA 72 bp TTTGGGGGCCGTGTACCCATGCACGGCCACCTCAGGTaGCTCCCGCTGTTGCCACCATTCCCACAGCAGCCC +
Preference number: 4 (lower is better)
Translates to: FGGRVPMHGHLR*LPLLPPFPQQP
Trigger: GGGCTGCTGTGGGAATGGTGGCAACAGCGGGAGCAACCTGAGGTGGCCGTGCATGGGTACACGGCCCCCAAA
65% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENSMUST00000105369.8
ENSMUST00000147778.9
ENSMUST00000169546.9
ENSMUST00000170219.9
3UTR CAA 72 bp ATCCTCCCTGCAGTTGAGCCTGGGTCCTGGAGCCTCTaGCTTCCGGAGGCCACTGCGCTAAGTGCCCAGGGG +
Preference number: 4 (lower is better)
Translates to: ILPAVEPGSWSL*LPEATALSAQG
Trigger: CCCCTGGGCACTTAGCGCAGTGGCCTCCGGAAGCAAGAGGCTCCAGGACCCAGGCTCAACTGCAGGGAGGAT
65% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000105369.8
ENSMUST00000147778.9
ENSMUST00000169546.9
ENSMUST00000170219.9
CDS-3UTR TCA 90 bp CGGGGAGCCTGTGCACATGCAGAGAGCAGGCGCGGTCGGTTATTGCTCAGAGAGGGAGCTGGGGCCGACTaGGTGGCCGGTGAGGGTTTT +
Preference number: 4 (lower is better)
Translates to: RGACAHAESRRGRLLLREGAGAD*VAGEGF
Trigger: AAAACCCTCACCGGCCACTCAGTCGGCCCCAGCTCC...CTCTCTGAGCAATAACCGACCGCGCCTGCTCTCTGCATGTGCACAGGCTCCCCG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000105369.8
ENSMUST00000169546.9
ENSMUST00000170219.9
CDS-3UTR TCA 90 bp GTTACTGCCTGCCAGTGCTCACGAGTGGAGGGTCAGCTGATCCTGGAGGGAGGCATCGCCGCTGCGCACTaGGTCGCGGTCATTGCCGCT +
Preference number: 4 (lower is better)
Translates to: VTACQCSRVEGQLILEGGIAAAH*VAVIAA
Trigger: AGCGGCAATGACCGCGACTCAGTGCGCAGCGGCGAT...GCCTCCCTCCAGGATCAGCTGACCCTCCACTCGTGAGCACTGGCAGGCAGTAAC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000105369.8
ENSMUST00000169546.9
ENSMUST00000170219.9
CDS-3UTR GCA 90 bp CCGGTGGAGCTGGTGGCTAGGAAGCGCTCTGTTTCGGTGTCCTGGCCCTCGGGGACAGCACCACCAGCGTaGCTCCAACGAACAGCGACA +
Preference number: 4 (lower is better)
Translates to: PVELVARKRSVSVSWPSGTAPPA*LQRTAT
Trigger: TGTCGCTGTTCGTTGGAGGCACGCTGGTGGTGCTGT...CCCCGAGGGCCAGGACACCGAAACAGAGCGCTTCCTAGCCACCAGCTCCACCGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000132523.8
ENSMUST00000147778.9
CDS-3UTR GCA 90 bp CCGGTGGAGCTGGTGGCTAGGAAGCGCTCTGTTTCGGTGTCCTGGCCCTCGGGGCCTCCCAGCAGCGTTTaGAGAGCAGAAGAACGCCAG +
Preference number: 4 (lower is better)
Translates to: PVELVARKRSVSVSWPSGPPSSV*RAEERQ
Trigger: CTGGCGTTCTTCTGCTCTGCAAACGCTGCTGGGAGG...CCCCGAGGGCCAGGACACCGAAACAGAGCGCTTCCTAGCCACCAGCTCCACCGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000132523.8
ENSMUST00000147778.9
CDS-3UTR GCA 90 bp GCCAGAGGCTGGGTGCTGGGGTCAACCATATATGGACCGGAGAGTCCAGTCTCGGTGGGGTGTGGCCGCTaGACTGGCCTCCCCCGAATC +
Preference number: 4 (lower is better)
Translates to: ARGWVLGSTIYGPESPVSVGCGR*TGLPRI
Trigger: GATTCGGGGGAGGCCAGTGCAGCGGCCACACCCCAC...CGAGACTGGACTCTCCGGTCCATATATGGTTGACCCCAGCACCCAGCCTCTGGC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENSMUST00000105369.8
ENSMUST00000169546.9
ENSMUST00000170219.9
CDS-3UTR GCA 90 bp GTTACTGCCTGCCAGTGCTCACGAGTGGAGGGTCAGCTGATCCTGGAGGGAGGCACCCGGAGGAGCCTGTaGCCATCTCCCCAGGCACTG +
Preference number: 4 (lower is better)
Translates to: VTACQCSRVEGQLILEGGTRRSL*PSPQAL
Trigger: CAGTGCCTGGGGAGATGGGCACAGGCTCCTCCGGGT...GCCTCCCTCCAGGATCAGCTGACCCTCCACTCGTGAGCACTGGCAGGCAGTAAC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000105369.8
ENSMUST00000169546.9
ENSMUST00000170219.9
CDS-3UTR GCA 90 bp GGGAGGAATGAGACGGGGAGCCTGTGCACATGCAGAGAGCAGGCGCGGTCGGTTCCGTCTTCTCGTCGATaGTGTAATCGCGGCGCGGCC +
Preference number: 4 (lower is better)
Translates to: GRNETGSLCTCREQARSVPSSRR*CNRGAA
Trigger: GGCCGCGCCGCGATTACAGCATCGACGAGAAGACGG...AACCGACCGCGCCTGCTCTCTGCATGTGCACAGGCTCCCCGTCTCATTCCTCCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000105369.8
ENSMUST00000169546.9
ENSMUST00000170219.9
CDS-3UTR CCA 90 bp TGGAGCTGGTGGCTAGGAAGCGCTCTGTTTCGGTGTCCTGGCCCTCGGGGTCTTCCGTGGGGCGGCTGGTaGCATTGTCCCACGAAGTCG +
Preference number: 4 (lower is better)
Translates to: WSWWLGSALFRCPGPRGLPWGGW*HCPTKS
Trigger: CGACTTCGTGGGACAATGCCACCAGCCGCCCCACGG...AAGACCCCGAGGGCCAGGACACCGAAACAGAGCGCTTCCTAGCCACCAGCTCCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000132523.8
ENSMUST00000147778.9
CDS-3UTR CCA 90 bp GCTGATCCTGGAGGGAGGCTGCACATGCACCTCAGAACCTGCTCCACCAGCATCCCGCCGTGGGGCGGCTaGTGGCATTGTCCCACGAAG +
Preference number: 4 (lower is better)
Translates to: ADPGGRLHMHLRTCSTSIPPWGG*WHCPTK
Trigger: CTTCGTGGGACAATGCCACCAGCCGCCCCACGGCGG...GATGCTGGTGGAGCAGGTTCTGAGGTGCATGTGCAGCCTCCCTCCAGGATCAGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000105369.8
ENSMUST00000147778.9
ENSMUST00000169546.9
ENSMUST00000170219.9
CDS-3UTR CCA 90 bp GGCTCTCGGGGAGGAATGAGACGGGGAGCCTGTGCACATGCAGAGAGCAGGCGCGGCCGGTGGAGCTGGTaGCTAGGAAGCGCTCTGTTT +
Preference number: 4 (lower is better)
Translates to: GSRGGMRRGACAHAESRRGRWSW*LGSALF
Trigger: AAACAGAGCGCTTCCTAGCCACCAGCTCCACCGGCC...GCGCCTGCTCTCTGCATGTGCACAGGCTCCCCGTCTCATTCCTCCCCGAGAGCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000105369.8
ENSMUST00000169546.9
ENSMUST00000170219.9
CDS-3UTR CCA 90 bp GGAGCCTGTGCACATGCAGAGAGCAGGCGCGGTCGGTTATTGCTCAGAGAGGAAAGACTCCGGAGGGGGTaGGAAGGCGGGTGCTGCCCC +
Preference number: 4 (lower is better)
Translates to: GACAHAESRRGRLLLREERLRRG*EGGCCP
Trigger: GGGGCAGCACCCGCCTTCCCACCCCCTCCGGAGTCT...TTCCTCTCTGAGCAATAACCGACCGCGCCTGCTCTCTGCATGTGCACAGGCTCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000105369.8
ENSMUST00000169546.9
ENSMUST00000170219.9
CDS-3UTR CCA 90 bp GATCCTGGAGGGAGGCTGCACATGCACCTCAGAACCTGCTCCACCAGCATCTGTAGACTCCGGAGGGGGTaGGAAGGCGGGTGCTGCCCC +
Preference number: 4 (lower is better)
Translates to: DPGGRLHMHLRTCSTSICRLRRG*EGGCCP
Trigger: GGGGCAGCACCCGCCTTCCCACCCCCTCCGGAGTCT...ACAGATGCTGGTGGAGCAGGTTCTGAGGTGCATGTGCAGCCTCCCTCCAGGATC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000105369.8
ENSMUST00000169546.9
ENSMUST00000170219.9
CDS-3UTR CCA 90 bp CGGGGAGCCTGTGCACATGCAGAGAGCAGGCGCGGTCGGTTATTGCTCAGAGAGGCACAACCCAGAGCCTaGGCAACCACCGCCTCCACC +
Preference number: 4 (lower is better)
Translates to: RGACAHAESRRGRLLLREAQPRA*ATTAST
Trigger: GGTGGAGGCGGTGGTTGCCCAGGCTCTGGGTTGTGC...CTCTCTGAGCAATAACCGACCGCGCCTGCTCTCTGCATGTGCACAGGCTCCCCG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000105369.8
ENSMUST00000169546.9
ENSMUST00000170219.9
3UTR CAA 72 bp GGAGAGAAGAGTCTCTCGTCGAGGCTGGCTGCTAGCTaGTCTAGCAGGGCCCCGGCGGGCTCAACGCACAAC +
Preference number: 4 (lower is better)
Translates to: GEKSLSSRLAAS*SSRAPAGSTHN
Trigger: GTTGTGCGTTGAGCCCGCCGGGGCCCTGCTAGACAAGCTAGCAGCCAGCCTCGACGAGAGACTCTTCTCTCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000147778.9
CDS-3UTR TCA 90 bp GCCAGAGGCTGGGTGCTGGGGTCAACCATATATGGACCGGAGAGTCCAGTCTCGATCGCCGCTGCGCACTaGGTCGCGGTCATTGCCGCT +
Preference number: 4 (lower is better)
Translates to: ARGWVLGSTIYGPESPVSIAAAH*VAVIAA
Trigger: AGCGGCAATGACCGCGACTCAGTGCGCAGCGGCGAT...CGAGACTGGACTCTCCGGTCCATATATGGTTGACCCCAGCACCCAGCCTCTGGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000105369.8
ENSMUST00000169546.9
ENSMUST00000170219.9
CDS-3UTR TCA 90 bp AAGGCGGGTGCTGCCCCTCCACCTCCGGAACCCGAGCCCGAGCTATCGCCGCTGTTAAGGAAACAGAGATaGGTCGGACTCGAACTGCGC +
Preference number: 4 (lower is better)
Translates to: KAGAAPPPPEPEPELSPLLRKQR*VGLELR
Trigger: GCGCAGTTCGAGTCCGACTCATCTCTGTTTCCTTAA...CAGCGGCGATAGCTCGGGCTCGGGTTCCGGAGGTGGAGGGGCAGCACCCGCCTT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000147778.9
CDS-3UTR GCA 90 bp CGGTGGAGCTGGTGGCTAGGAAGCGCTCTGTTTCGGTGTCCTGGCCCTCGGGGTCTGTTGAAGCGCTGGTaGACCTCCCAGCAGCGTTTG +
Preference number: 4 (lower is better)
Translates to: RWSWWLGSALFRCPGPRGLLKRW*TSQQRL
Trigger: CAAACGCTGCTGGGAGGTGCACCAGCGCTTCAACAG...ACCCCGAGGGCCAGGACACCGAAACAGAGCGCTTCCTAGCCACCAGCTCCACCG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000132523.8
ENSMUST00000147778.9
CDS-3UTR GCA 90 bp GCGCTAAGTGCCCAGGGGACACTATATGTGCACACTTGGGATTTGGGGGCCGTGGTGGGGTGTGGCCGCTaGACTGGCCTCCCCCGAATC +
Preference number: 4 (lower is better)
Translates to: ALSAQGTLYVHTWDLGAVVGCGR*TGLPRI
Trigger: GATTCGGGGGAGGCCAGTGCAGCGGCCACACCCCAC...CACGGCCCCCAAATCCCAAGTGTGCACATATAGTGTCCCCTGGGCACTTAGCGC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 3 transcripts:
ENSMUST00000105369.8
ENSMUST00000169546.9
ENSMUST00000170219.9
CDS-3UTR GCA 90 bp GGCCAGAGGCTGGGTGCTGGGGTCAACCATATATGGACCGGAGAGTCCAGTCTCTCGGCGTCCTGCTCTTaGTGCGGGTCCTGCTGCTGC +
Preference number: 4 (lower is better)
Translates to: GQRLGAGVNHIWTGESSLSASCS*CGSCCC
Trigger: GCAGCAGCAGGACCCGCAGCAAGAGCAGGACGCCGA...GAGACTGGACTCTCCGGTCCATATATGGTTGACCCCAGCACCCAGCCTCTGGCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000105369.8
ENSMUST00000169546.9
ENSMUST00000170219.9
CDS-3UTR GCA 90 bp GCTGATCCTGGAGGGAGGCTGCACATGCACCTCAGAACCTGCTCCACCAGCATCTCGGCGTCCTGCTCTTaGTGCGGGTCCTGCTGCTGC +
Preference number: 4 (lower is better)
Translates to: ADPGGRLHMHLRTCSTSISASCS*CGSCCC
Trigger: GCAGCAGCAGGACCCGCAGCAAGAGCAGGACGCCGA...GATGCTGGTGGAGCAGGTTCTGAGGTGCATGTGCAGCCTCCCTCCAGGATCAGC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000105369.8
ENSMUST00000169546.9
ENSMUST00000170219.9
CDS-3UTR CCA 90 bp GCTGATCCTGGAGGGAGGCTGCACATGCACCTCAGAACCTGCTCCACCAGCATCCCGTGGGGCGGCTGGTaGCATTGTCCCACGAAGTCG +
Preference number: 4 (lower is better)
Translates to: ADPGGRLHMHLRTCSTSIPWGGW*HCPTKS
Trigger: CGACTTCGTGGGACAATGCCACCAGCCGCCCCACGG...GATGCTGGTGGAGCAGGTTCTGAGGTGCATGTGCAGCCTCCCTCCAGGATCAGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000105369.8
ENSMUST00000147778.9
ENSMUST00000169546.9
ENSMUST00000170219.9
CDS-3UTR CCA 90 bp GGGAGGAATGAGACGGGGAGCCTGTGCACATGCAGAGAGCAGGCGCGGTCGGTTGGCCGGTGGAGCTGGTaGCTAGGAAGCGCTCTGTTT +
Preference number: 4 (lower is better)
Translates to: GRNETGSLCTCREQARSVGRWSW*LGSALF
Trigger: AAACAGAGCGCTTCCTAGCCACCAGCTCCACCGGCC...AACCGACCGCGCCTGCTCTCTGCATGTGCACAGGCTCCCCGTCTCATTCCTCCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000105369.8
ENSMUST00000169546.9
ENSMUST00000170219.9
CDS-3UTR CCA 90 bp GGAAATCCCCTTCTGTCAGGGTGTACCGGCGGCCCTTGTCCTGAGCCTTGCGGCGGCCGGTGGAGCTGGTaGCTAGGAAGCGCTCTGTTT +
Preference number: 4 (lower is better)
Translates to: GNPLLSGCTGGPCPEPCGGRWSW*LGSALF
Trigger: AAACAGAGCGCTTCCTAGCCACCAGCTCCACCGGCC...GCCGCAAGGCTCAGGACAAGGGCCGCCGGTACACCCTGACAGAAGGGGATTTCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000123967.2
CDS-3UTR CCA 90 bp GCCAGAGGCTGGGTGCTGGGGTCAACCATATATGGACCGGAGAGTCCAGTCTCGCAGGCCCAGCAGCCTTaGCACCCCGGGTACCTGCAT +
Preference number: 4 (lower is better)
Translates to: ARGWVLGSTIYGPESPVSQAQQP*HPGYLH
Trigger: ATGCAGGTACCCGGGGTGCCAAGGCTGCTGGGCCTG...CGAGACTGGACTCTCCGGTCCATATATGGTTGACCCCAGCACCCAGCCTCTGGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000105369.8
ENSMUST00000169546.9
ENSMUST00000170219.9
CDS-3UTR CCA 90 bp GGCCAGAGGCTGGGTGCTGGGGTCAACCATATATGGACCGGAGAGTCCAGTCTCCAGGCCCAGCAGCCTTaGCACCCCGGGTACCTGCAT +
Preference number: 4 (lower is better)
Translates to: GQRLGAGVNHIWTGESSLQAQQP*HPGYLH
Trigger: ATGCAGGTACCCGGGGTGCCAAGGCTGCTGGGCCTG...GAGACTGGACTCTCCGGTCCATATATGGTTGACCCCAGCACCCAGCCTCTGGCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000105369.8
ENSMUST00000169546.9
ENSMUST00000170219.9
CDS-3UTR CCA 90 bp GGGAGGAATGAGACGGGGAGCCTGTGCACATGCAGAGAGCAGGCGCGGTCGGTTTTGCCGCTGCTGCTGTaGTCCGATGCAGTGGCTGCA +
Preference number: 4 (lower is better)
Translates to: GRNETGSLCTCREQARSVLPLLL*SDAVAA
Trigger: TGCAGCCACTGCATCGGACCACAGCAGCAGCGGCAA...AACCGACCGCGCCTGCTCTCTGCATGTGCACAGGCTCCCCGTCTCATTCCTCCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000105369.8
ENSMUST00000169546.9
ENSMUST00000170219.9
CDS-3UTR TCA 90 bp CCAGAGGCTGGGTGCTGGGGTCAACCATATATGGACCGGAGAGTCCAGTCTCGTGCTGCCCGCTGCCGCTaGAAGTGGTGCCTCTTAGGG +
Preference number: 4 (lower is better)
Translates to: PEAGCWGQPYMDRRVQSRAARCR*KWCLLG
Trigger: CCCTAAGAGGCACCACTTTCAGCGGCAGCGGGCAGC...ACGAGACTGGACTCTCCGGTCCATATATGGTTGACCCCAGCACCCAGCCTCTGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000105369.8
ENSMUST00000169546.9
ENSMUST00000170219.9
CDS-3UTR GCA 90 bp GGCCGGTGGAGCTGGTGGCTAGGAAGCGCTCTGTTTCGGTGTCCTGGCCCTCGGAGTGGTGGTCTTCTCTaGTTCCTCCATGGCCCTGTT +
Preference number: 4 (lower is better)
Translates to: GRWSWWLGSALFRCPGPRSGGLL*FLHGPV
Trigger: AACAGGGCCATGGAGGAAGCAGAGAAGACCACCACT...CCGAGGGCCAGGACACCGAAACAGAGCGCTTCCTAGCCACCAGCTCCACCGGCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000132523.8
ENSMUST00000147778.9
CDS-3UTR GCA 90 bp GCTTCCGGAGGCCACTGCGCTAAGTGCCCAGGGGACACTATATGTGCACACTTGACCCGGAGGAGCCTGTaGCCATCTCCCCAGGCACTG +
Preference number: 4 (lower is better)
Translates to: ASGGHCAKCPGDTICAHLTRRSL*PSPQAL
Trigger: CAGTGCCTGGGGAGATGGGCACAGGCTCCTCCGGGT...CAAGTGTGCACATATAGTGTCCCCTGGGCACTTAGCGCAGTGGCCTCCGGAAGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000105369.8
ENSMUST00000169546.9
ENSMUST00000170219.9
CDS-3UTR GCA 90 bp ACGGGGAGCCTGTGCACATGCAGAGAGCAGGCGCGGTCGGTTATTGCTCAGAGAGGGACGTCCCCCTCCTaGTCCATGCTCTCACTGGCT +
Preference number: 4 (lower is better)
Translates to: TGSLCTCREQARSVIAQRGTSPS*SMLSLA
Trigger: AGCCAGTGAGAGCATGGAGCAGGAGGGGGACGTCCC...TCTCTGAGCAATAACCGACCGCGCCTGCTCTCTGCATGTGCACAGGCTCCCCGT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000105369.8
ENSMUST00000169546.9
ENSMUST00000170219.9
CDS-3UTR GCA 90 bp CCTCCAGTAGGTTCGCTCACACAGTGGCAGGCAGTGTTACTGCCTGCCAGTGCTGCGTCCTGCTCTTGCTaGGGGTCCTGCTGCTGCGCA +
Preference number: 4 (lower is better)
Translates to: PPVGSLTQWQAVLLPASAASCSC*GSCCCA
Trigger: TGCGCAGCAGCAGGACCCGCAGCAAGAGCAGGACGC...AGCACTGGCAGGCAGTAACACTGCCTGCCACTGTGTGAGCGAACCTACTGGAGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000105369.8
ENSMUST00000169546.9
ENSMUST00000170219.9
CDS-3UTR GCA 90 bp CGGGGAGCCTGTGCACATGCAGAGAGCAGGCGCGGTCGGTTATTGCTCAGAGAGGGTCATTGCCGCTGCTaGTGTGGTCCGATGCAGTGG +
Preference number: 4 (lower is better)
Translates to: RGACAHAESRRGRLLLREGHCRC*CGPMQW
Trigger: CCACTGCATCGGACCACAGCAGCAGCGGCAATGACC...CTCTCTGAGCAATAACCGACCGCGCCTGCTCTCTGCATGTGCACAGGCTCCCCG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000105369.8
ENSMUST00000169546.9
ENSMUST00000170219.9
CDS-3UTR GCA 90 bp TCAGCTGATCCTGGAGGGAGGCTGCACATGCACCTCAGAACCTGCTCCACCAGCCGCGGTCATTGCCGCTaGTGCTGTGGTCCGATGCAG +
Preference number: 4 (lower is better)
Translates to: SADPGGRLHMHLRTCSTSRGHCR*CCGPMQ
Trigger: CTGCATCGGACCACAGCAGCAGCGGCAATGACCGCG...GCTGGTGGAGCAGGTTCTGAGGTGCATGTGCAGCCTCCCTCCAGGATCAGCTGA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000105369.8
ENSMUST00000169546.9
ENSMUST00000170219.9
CDS-3UTR GCA 90 bp GCTGATCCTGGAGGGAGGCTGCACATGCACCTCAGAACCTGCTCCACCAGCATCCCGTCTTCTCGTCGATaGTGTAATCGCGGCGCGGCC +
Preference number: 4 (lower is better)
Translates to: ADPGGRLHMHLRTCSTSIPSSRR*CNRGAA
Trigger: GGCCGCGCCGCGATTACAGCATCGACGAGAAGACGG...GATGCTGGTGGAGCAGGTTCTGAGGTGCATGTGCAGCCTCCCTCCAGGATCAGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000105369.8
ENSMUST00000169546.9
ENSMUST00000170219.9
CDS-3UTR GCA 90 bp ATCCCCTTCTGTCAGGGTGTACCGGCGGCCCTTGTCCTGAGCCTTGCGGCTCTGAGTGGTGGTCTTCTCTaGTTCCTCCATGGCCCGTGG +
Preference number: 4 (lower is better)
Translates to: IPFCQGVPAALVLSLAALSGGLL*FLHGPW
Trigger: CCACGGGCCATGGAGGAAGCAGAGAAGACCACCACT...CAGAGCCGCAAGGCTCAGGACAAGGGCCGCCGGTACACCCTGACAGAAGGGGAT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000123967.2
CDS-3UTR CCA 90 bp GTGGCCGCTGCACTGGCCTCCCCCGAATCACACTCATGGATAGTAGCGATTTTGCCGCCGTGGGGCGGCTaGTGGCATTGTCCCACGAAG +
Preference number: 4 (lower is better)
Translates to: VAAALASPESHSWIVAILPPWGG*WHCPTK
Trigger: CTTCGTGGGACAATGCCACCAGCCGCCCCACGGCGG...CAAAATCGCTACTATCCATGAGTGTGATTCGGGGGAGGCCAGTGCAGCGGCCAC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000147778.9
CDS-3UTR CCA 90 bp GCAGGCGCGGTCGGTTATTGCTCAGAGAGGAAAGGTAGAGCGCATACCATGGACCCGCCGTGGGGCGGCTaGTGGCATTGTCCCACGAAG +
Preference number: 4 (lower is better)
Translates to: AGAVGYCSERKGRAHTMDPPWGG*WHCPTK
Trigger: CTTCGTGGGACAATGCCACCAGCCGCCCCACGGCGG...GTCCATGGTATGCGCTCTACCTTTCCTCTCTGAGCAATAACCGACCGCGCCTGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000105369.8
ENSMUST00000147778.9
ENSMUST00000169546.9
ENSMUST00000170219.9
CDS-3UTR CCA 90 bp CCAGAGGCTGGGTGCTGGGGTCAACCATATATGGACCGGAGAGTCCAGTCTCGTGAGGTGGTAGCTGGGTaGGGTGTGGCCGCTGCACTG +
Preference number: 4 (lower is better)
Translates to: PEAGCWGQPYMDRRVQSREVVAG*GVAAAL
Trigger: CAGTGCAGCGGCCACACCCCACCCAGCTACCACCTC...ACGAGACTGGACTCTCCGGTCCATATATGGTTGACCCCAGCACCCAGCCTCTGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000105369.8
ENSMUST00000169546.9
ENSMUST00000170219.9
CDS-3UTR CCA 90 bp CCTCCAGTAGGTTCGCTCACACAGTGGCAGGCAGTGTTACTGCCTGCCAGTGCTCAGGCCCAGCAGCCTTaGCACCCCGGGTACCTGCAT +
Preference number: 4 (lower is better)
Translates to: PPVGSLTQWQAVLLPASAQAQQP*HPGYLH
Trigger: ATGCAGGTACCCGGGGTGCCAAGGCTGCTGGGCCTG...AGCACTGGCAGGCAGTAACACTGCCTGCCACTGTGTGAGCGAACCTACTGGAGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000105369.8
ENSMUST00000169546.9
ENSMUST00000170219.9
CDS-3UTR CCA 90 bp GGCCAGAGGCTGGGTGCTGGGGTCAACCATATATGGACCGGAGAGTCCAGTCTCTGGCTCCATCCAGGCTaGCATGTCGGCGTAGCCGAG +
Preference number: 4 (lower is better)
Translates to: GQRLGAGVNHIWTGESSLWLHPG*HVGVAE
Trigger: CTCGGCTACGCCGACATGCCAGCCTGGATGGAGCCA...GAGACTGGACTCTCCGGTCCATATATGGTTGACCCCAGCACCCAGCCTCTGGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000105369.8
ENSMUST00000169546.9
ENSMUST00000170219.9
CDS-3UTR TCA 90 bp GATCCTCAGTGCCCCACAGTCACTTCACCTCCAGTAGGTTCGCTCACACAGTGGCCTCCATGGCCCTGTTaGAGCGCTGGTGCACCTCCC +
Preference number: 4 (lower is better)
Translates to: DPQCPTVTSPPVGSLTQWPPWPC*SAGAPP
Trigger: GGGAGGTGCACCAGCGCTTCAACAGGGCCATGGAGG...CCACTGTGTGAGCGAACCTACTGGAGGTGAAGTGACTGTGGGGCACTGAGGATC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000105369.8
ENSMUST00000147778.9
ENSMUST00000169546.9
ENSMUST00000170219.9
CDS-3UTR TCA 90 bp CATATATGGACCGGAGAGTCCAGTCTCGTCATCCTCCCTGCAGTTGAGCCTGGGCGGCGGCCCTTGTCCTaGGCCTTGCGGCTCTGTTCA +
Preference number: 4 (lower is better)
Translates to: HIWTGESSLVILPAVEPGRRPLS*ALRLCS
Trigger: TGAACAGAGCCGCAAGGCTCAGGACAAGGGCCGCCG...CCCAGGCTCAACTGCAGGGAGGATGACGAGACTGGACTCTCCGGTCCATATATG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000105369.8
ENSMUST00000169546.9
ENSMUST00000170219.9
CDS-3UTR TCA 90 bp CCTGTGCACATGCAGAGAGCAGGCGCGGTCGGTTATTGCTCAGAGAGGAAAGGTCGGCGGCCCTTGTCCTaGGCCTTGCGGCTCTGTTCA +
Preference number: 4 (lower is better)
Translates to: PVHMQRAGAVGYCSERKGRRPLS*ALRLCS
Trigger: TGAACAGAGCCGCAAGGCTCAGGACAAGGGCCGCCG...ACCTTTCCTCTCTGAGCAATAACCGACCGCGCCTGCTCTCTGCATGTGCACAGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000105369.8
ENSMUST00000169546.9
ENSMUST00000170219.9
CDS-3UTR TCA 90 bp GCAGGCGCGGTCGGTTATTGCTCAGAGAGGAAAGGTAGAGCGCATACCATGGACCGGCGGCCCTTGTCCTaGGCCTTGCGGCTCTGTTCA +
Preference number: 4 (lower is better)
Translates to: AGAVGYCSERKGRAHTMDRRPLS*ALRLCS
Trigger: TGAACAGAGCCGCAAGGCTCAGGACAAGGGCCGCCG...GTCCATGGTATGCGCTCTACCTTTCCTCTCTGAGCAATAACCGACCGCGCCTGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000105369.8
ENSMUST00000169546.9
ENSMUST00000170219.9
CDS-3UTR TCA 90 bp CATATATGGACCGGAGAGTCCAGTCTCGTCATCCTCCCTGCAGTTGAGCCTGGGGCTGCCCGCTGCCGCTaGAAGTGGTGCCTCTTAGGG +
Preference number: 4 (lower is better)
Translates to: HIWTGESSLVILPAVEPGAARCR*KWCLLG
Trigger: CCCTAAGAGGCACCACTTTCAGCGGCAGCGGGCAGC...CCCAGGCTCAACTGCAGGGAGGATGACGAGACTGGACTCTCCGGTCCATATATG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000105369.8
ENSMUST00000169546.9
ENSMUST00000170219.9
CDS-3UTR TCA 90 bp CAGGGGGCGGCGGCCCTTGTCCTGAGCCTTGCGGCTCTGTTCAAACAGGGCAGCTTAAGGAAACAGAGATaGGTCGGACTCGAACTGCGC +
Preference number: 4 (lower is better)
Translates to: QGAAALVLSLAALFKQGSLRKQR*VGLELR
Trigger: GCGCAGTTCGAGTCCGACTCATCTCTGTTTCCTTAA...GCTGCCCTGTTTGAACAGAGCCGCAAGGCTCAGGACAAGGGCCGCCGCCCCCTG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000132523.8
CDS-3UTR GCA 90 bp GGAAACTTGAAGCTGCCACCTGGGCTGTTCTGTCCGTTGTGTCCAAAGCCCAAGGTGGGGTGTGGCCGCTaGACTGGCCTCCCCCGAATC +
Preference number: 4 (lower is better)
Translates to: GNLKLPPGLFCPLCPKPKVGCGR*TGLPRI
Trigger: GATTCGGGGGAGGCCAGTGCAGCGGCCACACCCCAC...CTTGGGCTTTGGACACAACGGACAGAACAGCCCAGGTGGCAGCTTCAAGTTTCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000105369.8
ENSMUST00000169546.9
ENSMUST00000170219.9
CDS-3UTR GCA 90 bp GCTGATCCTGGAGGGAGGCTGCACATGCACCTCAGAACCTGCTCCACCAGCATCCATGCTCTCACTGGCTaGCCGCTGCCGCTGAAAGTG +
Preference number: 4 (lower is better)
Translates to: ADPGGRLHMHLRTCSTSIHALTG*PLPLKV
Trigger: CACTTTCAGCGGCAGCGGGCAGCCAGTGAGAGCATG...GATGCTGGTGGAGCAGGTTCTGAGGTGCATGTGCAGCCTCCCTCCAGGATCAGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000105369.8
ENSMUST00000169546.9
ENSMUST00000170219.9
CDS-3UTR GCA 90 bp ACGGGGAGCCTGTGCACATGCAGAGAGCAGGCGCGGTCGGTTATTGCTCAGAGACATGCTCTCACTGGCTaGCCGCTGCCGCTGAAAGTG +
Preference number: 4 (lower is better)
Translates to: TGSLCTCREQARSVIAQRHALTG*PLPLKV
Trigger: CACTTTCAGCGGCAGCGGGCAGCCAGTGAGAGCATG...TCTCTGAGCAATAACCGACCGCGCCTGCTCTCTGCATGTGCACAGGCTCCCCGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000105369.8
ENSMUST00000169546.9
ENSMUST00000170219.9
CDS-3UTR GCA 90 bp ACGGGGAGCCTGTGCACATGCAGAGAGCAGGCGCGGTCGGTTATTGCTCAGAGAGGTCATTGCCGCTGCTaGTGTGGTCCGATGCAGTGG +
Preference number: 4 (lower is better)
Translates to: TGSLCTCREQARSVIAQRGHCRC*CGPMQW
Trigger: CCACTGCATCGGACCACAGCAGCAGCGGCAATGACC...TCTCTGAGCAATAACCGACCGCGCCTGCTCTCTGCATGTGCACAGGCTCCCCGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000105369.8
ENSMUST00000169546.9
ENSMUST00000170219.9
CDS-3UTR GCA 90 bp GGAGCCTGTGCACATGCAGAGAGCAGGCGCGGTCGGTTATTGCTCAGAGAGGAACGCGGTCATTGCCGCTaGTGCTGTGGTCCGATGCAG +
Preference number: 4 (lower is better)
Translates to: GACAHAESRRGRLLLREERGHCR*CCGPMQ
Trigger: CTGCATCGGACCACAGCAGCAGCGGCAATGACCGCG...TTCCTCTCTGAGCAATAACCGACCGCGCCTGCTCTCTGCATGTGCACAGGCTCC
61% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000105369.8
ENSMUST00000169546.9
ENSMUST00000170219.9
CDS-3UTR GCA 90 bp GCTTCCGGAGGCCACTGCGCTAAGTGCCCAGGGGACACTATATGTGCACACTTGCTGAGTCGCGGTCATTaGCGCTGCTGCTGTGGTCCG +
Preference number: 4 (lower is better)
Translates to: ASGGHCAKCPGDTICAHLLSRGH*RCCCGP
Trigger: CGGACCACAGCAGCAGCGGCAATGACCGCGACTCAG...CAAGTGTGCACATATAGTGTCCCCTGGGCACTTAGCGCAGTGGCCTCCGGAAGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000105369.8
ENSMUST00000169546.9
ENSMUST00000170219.9
CDS-3UTR GCA 90 bp GCGCTAAGTGCCCAGGGGACACTATATGTGCACACTTGGGATTTGGGGGCCGTGCTGAGTCGCGGTCATTaGCGCTGCTGCTGTGGTCCG +
Preference number: 4 (lower is better)
Translates to: ALSAQGTLYVHTWDLGAVLSRGH*RCCCGP
Trigger: CGGACCACAGCAGCAGCGGCAATGACCGCGACTCAG...CACGGCCCCCAAATCCCAAGTGTGCACATATAGTGTCCCCTGGGCACTTAGCGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000105369.8
ENSMUST00000169546.9
ENSMUST00000170219.9
CDS-3UTR GCA 90 bp GGAGCCTGTGCACATGCAGAGAGCAGGCGCGGTCGGTTATTGCTCAGAGAGGAACTCCGCGCCCCTCGATaGTCGCATAGCCACTGTCCA +
Preference number: 4 (lower is better)
Translates to: GACAHAESRRGRLLLREELRAPR*SHSHCP
Trigger: TGGACAGTGGCTATGCGAGCATCGAGGGGCGCGGAG...TTCCTCTCTGAGCAATAACCGACCGCGCCTGCTCTCTGCATGTGCACAGGCTCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000105369.8
ENSMUST00000169546.9
ENSMUST00000170219.9
CDS-3UTR CCA 90 bp CCTGTGCACATGCAGAGAGCAGGCGCGGTCGGTTATTGCTCAGAGAGGAAAGGTCCGTGGGGCGGCTGGTaGCATTGTCCCACGAAGTCG +
Preference number: 4 (lower is better)
Translates to: PVHMQRAGAVGYCSERKGPWGGW*HCPTKS
Trigger: CGACTTCGTGGGACAATGCCACCAGCCGCCCCACGG...ACCTTTCCTCTCTGAGCAATAACCGACCGCGCCTGCTCTCTGCATGTGCACAGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000105369.8
ENSMUST00000147778.9
ENSMUST00000169546.9
ENSMUST00000170219.9
CDS-3UTR CCA 90 bp GTGGCCGCTGCACTGGCCTCCCCCGAATCACACTCATGGATAGTAGCGATTTTGCCGTGGGGCGGCTGGTaGCATTGTCCCACGAAGTCG +
Preference number: 4 (lower is better)
Translates to: VAAALASPESHSWIVAILPWGGW*HCPTKS
Trigger: CGACTTCGTGGGACAATGCCACCAGCCGCCCCACGG...CAAAATCGCTACTATCCATGAGTGTGATTCGGGGGAGGCCAGTGCAGCGGCCAC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENSMUST00000123967.2
ENSMUST00000147778.9
CDS-3UTR CCA 90 bp GATCCTGGAGGGAGGCTGCACATGCACCTCAGAACCTGCTCCACCAGCATCTGTGCCCTGTTGAAGCGCTaGTGCACCTCCCAGCAGCGT +
Preference number: 4 (lower is better)
Translates to: DPGGRLHMHLRTCSTSICALLKR*CTSQQR
Trigger: ACGCTGCTGGGAGGTGCACCAGCGCTTCAACAGGGC...ACAGATGCTGGTGGAGCAGGTTCTGAGGTGCATGTGCAGCCTCCCTCCAGGATC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000105369.8
ENSMUST00000147778.9
ENSMUST00000169546.9
ENSMUST00000170219.9
CDS-3UTR CCA 90 bp CCTCCAGTAGGTTCGCTCACACAGTGGCAGGCAGTGTTACTGCCTGCCAGTGCTGGCGGTAGGTGGAGGTaGGTGAGGCGGGCATTCTTG +
Preference number: 4 (lower is better)
Translates to: PPVGSLTQWQAVLLPASAGGRWR*VRRAFL
Trigger: CAAGAATGCCCGCCTCACCCACCTCCACCTACCGCC...AGCACTGGCAGGCAGTAACACTGCCTGCCACTGTGTGAGCGAACCTACTGGAGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000105369.8
ENSMUST00000169546.9
ENSMUST00000170219.9
CDS-3UTR CCA 90 bp GATCCTCAGTGCCCCACAGTCACTTCACCTCCAGTAGGTTCGCTCACACAGTGGGAGGTGGTAGCTGGGTaGGGTGTGGCCGCTGCACTG +
Preference number: 4 (lower is better)
Translates to: DPQCPTVTSPPVGSLTQWEVVAG*GVAAAL
Trigger: CAGTGCAGCGGCCACACCCCACCCAGCTACCACCTC...CCACTGTGTGAGCGAACCTACTGGAGGTGAAGTGACTGTGGGGCACTGAGGATC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000105369.8
ENSMUST00000169546.9
ENSMUST00000170219.9
CDS-3UTR CCA 90 bp CCAGAGGCTGGGTGCTGGGGTCAACCATATATGGACCGGAGAGTCCAGTCTCGTCTGGGGCCGACTGAGTaGCCGGTGAGGGTTTTCCCA +
Preference number: 4 (lower is better)
Translates to: PEAGCWGQPYMDRRVQSRLGPTE*PVRVFP
Trigger: TGGGAAAACCCTCACCGGCCACTCAGTCGGCCCCAG...ACGAGACTGGACTCTCCGGTCCATATATGGTTGACCCCAGCACCCAGCCTCTGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENSMUST00000105369.8
ENSMUST00000169546.9
ENSMUST00000170219.9
CDS-3UTR CCA 90 bp GGCCGTGTACCCATGCACGGCCACCTCAGGTTGCTCCCGCTGTTGCCACCATTCTGGACGCTCTCTGGCTaGGCTCCAGCTTCCATTTCT +
Preference number: 4 (lower is better)
Translates to: GRVPMHGHLRLLPLLPPFWTLSG*APASIS
Trigger: AGAAATGGAAGCTGGAGCCCAGCCAGAGAGCGTCCA...GAATGGTGGCAACAGCGGGAGCAACCTGAGGTGGCCGTGCATGGGTACACGGCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000105369.8
ENSMUST00000169546.9
ENSMUST00000170219.9
CDS-3UTR CCA 90 bp GGCCAGAGGCTGGGTGCTGGGGTCAACCATATATGGACCGGAGAGTCCAGTCTCCTCTCGTGTCCAGACTaGACGCTCTCTGGCTGGGCT +
Preference number: 4 (lower is better)
Translates to: GQRLGAGVNHIWTGESSLLSCPD*TLSGWA
Trigger: AGCCCAGCCAGAGAGCGTCCAGTCTGGACACGAGAG...GAGACTGGACTCTCCGGTCCATATATGGTTGACCCCAGCACCCAGCCTCTGGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000105369.8
ENSMUST00000169546.9
ENSMUST00000170219.9
CDS-3UTR CCA 90 bp GAGCCTCTTGCTTCCGGAGGCCACTGCGCTAAGTGCCCAGGGGACACTATATGTGCTCCATGCTCTCACTaGCTGCCCGCTGCCGCTGAA +
Preference number: 4 (lower is better)
Translates to: EPLASGGHCAKCPGDTICAPCSH*LPAAAE
Trigger: TTCAGCGGCAGCGGGCAGCCAGTGAGAGCATGGAGC...ACATATAGTGTCCCCTGGGCACTTAGCGCAGTGGCCTCCGGAAGCAAGAGGCTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000105369.8
ENSMUST00000169546.9
ENSMUST00000170219.9
CDS-3UTR CCA 90 bp GCCAGAGGCTGGGTGCTGGGGTCAACCATATATGGACCGGAGAGTCCAGTCTCGTTGCCGCTGCTGCTGTaGTCCGATGCAGTGGCTGCA +
Preference number: 4 (lower is better)
Translates to: ARGWVLGSTIYGPESPVSLPLLL*SDAVAA
Trigger: TGCAGCCACTGCATCGGACCACAGCAGCAGCGGCAA...CGAGACTGGACTCTCCGGTCCATATATGGTTGACCCCAGCACCCAGCCTCTGGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000105369.8
ENSMUST00000169546.9
ENSMUST00000170219.9
CDS-3UTR CCA 90 bp GATCCTGGAGGGAGGCTGCACATGCACCTCAGAACCTGCTCCACCAGCATCTGTAGGCCTCAAAGCAGGTaGAGACTCCGGAGGGGGTGG +
Preference number: 4 (lower is better)
Translates to: DPGGRLHMHLRTCSTSICRPQSR*RLRRGW
Trigger: CCACCCCCTCCGGAGTCTCCACCTGCTTTGAGGCCT...ACAGATGCTGGTGGAGCAGGTTCTGAGGTGCATGTGCAGCCTCCCTCCAGGATC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000105369.8
ENSMUST00000169546.9
ENSMUST00000170219.9
CDS-3UTR CCA 90 bp GCGCTAAGTGCCCAGGGGACACTATATGTGCACACTTGGGATTTGGGGGCCGTGAGGCCTCAAAGCAGGTaGAGACTCCGGAGGGGGTGG +
Preference number: 4 (lower is better)
Translates to: ALSAQGTLYVHTWDLGAVRPQSR*RLRRGW
Trigger: CCACCCCCTCCGGAGTCTCCACCTGCTTTGAGGCCT...CACGGCCCCCAAATCCCAAGTGTGCACATATAGTGTCCCCTGGGCACTTAGCGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENSMUST00000105369.8
ENSMUST00000169546.9
ENSMUST00000170219.9
CDS-3UTR CCA 90 bp GCAGGCGCGGTCGGTTATTGCTCAGAGAGGAAAGGTAGAGCGCATACCATGGACGCACAACCCAGAGCCTaGGCAACCACCGCCTCCACC +
Preference number: 4 (lower is better)
Translates to: AGAVGYCSERKGRAHTMDAQPRA*ATTAST
Trigger: GGTGGAGGCGGTGGTTGCCCAGGCTCTGGGTTGTGC...GTCCATGGTATGCGCTCTACCTTTCCTCTCTGAGCAATAACCGACCGCGCCTGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000105369.8
ENSMUST00000169546.9
ENSMUST00000170219.9
CDS-3UTR CCA 90 bp GGGAGGAATGAGACGGGGAGCCTGTGCACATGCAGAGAGCAGGCGCGGTCGGTTGCGACAATCAGCACCTaGGATGAGGCAACTGGCTCA +
Preference number: 4 (lower is better)
Translates to: GRNETGSLCTCREQARSVATIST*DEATGS
Trigger: TGAGCCAGTTGCCTCATCCCAGGTGCTGATTGTCGC...AACCGACCGCGCCTGCTCTCTGCATGTGCACAGGCTCCCCGTCTCATTCCTCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000105369.8
ENSMUST00000169546.9
ENSMUST00000170219.9
CDS-3UTR CCA 90 bp TGTGGCCGCTGCACTGGCCTCCCCCGAATCACACTCATGGATAGTAGCGATTTTGGCCCGTGGGGCGGCTaGTGGCATTGTCCCACGAAG +
Preference number: 4 (lower is better)
Translates to: CGRCTGLPRITLMDSSDFGPWGG*WHCPTK
Trigger: CTTCGTGGGACAATGCCACCAGCCGCCCCACGGGCC...AAAATCGCTACTATCCATGAGTGTGATTCGGGGGAGGCCAGTGCAGCGGCCACA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000123967.2
3UTR CAA 72 bp ACCGGGGTCGCTGTGCTGCCGTCCTCTCTGTTGCCATaGCTTCCGCGCATGAGTGTGAGGATGTGCACGTGT +
Preference number: 4 (lower is better)
Translates to: TGVAVLPSSLLP*LPRMSVRMCTC
Trigger: ACACGTGCACATCCTCACACTCATGCGCGGAAGCAATGGCAACAGAGAGGACGGCAGCACAGCGACCCCGGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000147778.9
CDS-3UTR TCA 90 bp ACCATATATGGACCGGAGAGTCCAGTCTCGTCATCCTCCCTGCAGTTGAGCCTGCCTCCATGGCCCTGTTaGAGCGCTGGTGCACCTCCC +
Preference number: 4 (lower is better)
Translates to: TIYGPESPVSSSSLQLSLPPWPC*SAGAPP
Trigger: GGGAGGTGCACCAGCGCTTCAACAGGGCCATGGAGG...CAGGCTCAACTGCAGGGAGGATGACGAGACTGGACTCTCCGGTCCATATATGGT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000105369.8
ENSMUST00000147778.9
ENSMUST00000169546.9
ENSMUST00000170219.9
CDS-3UTR TCA 90 bp AACTTGAAGCTGCCACCTGGGCTGTTCTGTCCGTTGTGTCCAAAGCCCAAGGCTCCTCCATGGCCCTGTTaGAGCGCTGGTGCACCTCCC +
Preference number: 4 (lower is better)
Translates to: NLKLPPGLFCPLCPKPKAPPWPC*SAGAPP
Trigger: GGGAGGTGCACCAGCGCTTCAACAGGGCCATGGAGG...AGCCTTGGGCTTTGGACACAACGGACAGAACAGCCCAGGTGGCAGCTTCAAGTT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000105369.8
ENSMUST00000147778.9
ENSMUST00000169546.9
ENSMUST00000170219.9
CDS-3UTR TCA 90 bp CTAAGTGCCCAGGGGACACTATATGTGCACACTTGGGATTTGGGGGCCGTGTACGGAGCTGGGGCCGACTaGGTGGCCGGTGAGGGTTTT +
Preference number: 4 (lower is better)
Translates to: LSAQGTLYVHTWDLGAVYGAGAD*VAGEGF
Trigger: AAAACCCTCACCGGCCACTCAGTCGGCCCCAGCTCC...GTACACGGCCCCCAAATCCCAAGTGTGCACATATAGTGTCCCCTGGGCACTTAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENSMUST00000105369.8
ENSMUST00000169546.9
ENSMUST00000170219.9
CDS-3UTR TCA 90 bp ACGGGGAGCCTGTGCACATGCAGAGAGCAGGCGCGGTCGGTTATTGCTCAGAGAGCGCTGGCAATGTACTaGATGAAGTCGGCATGGGGG +
Preference number: 4 (lower is better)
Translates to: TGSLCTCREQARSVIAQRALAMY*MKSAWG
Trigger: CCCCCATGCCGACTTCATTCAGTACATTGCCAGCGC...TCTCTGAGCAATAACCGACCGCGCCTGCTCTCTGCATGTGCACAGGCTCCCCGT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000105369.8
ENSMUST00000169546.9
ENSMUST00000170219.9
CDS-3UTR TCA 90 bp GGCCAGAGGCTGGGTGCTGGGGTCAACCATATATGGACCGGAGAGTCCAGTCTCGCGCTGGCAATGTACTaGATGAAGTCGGCATGGGGG +
Preference number: 4 (lower is better)
Translates to: GQRLGAGVNHIWTGESSLALAMY*MKSAWG
Trigger: CCCCCATGCCGACTTCATTCAGTACATTGCCAGCGC...GAGACTGGACTCTCCGGTCCATATATGGTTGACCCCAGCACCCAGCCTCTGGCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000105369.8
ENSMUST00000169546.9
ENSMUST00000170219.9
CDS-3UTR GCA 90 bp TCAGCTGATCCTGGAGGGAGGCTGCACATGCACCTCAGAACCTGCTCCACCAGCACAGCACCACCAGCGTaGCTCCAACGAACAGCGACA +
Preference number: 4 (lower is better)
Translates to: SADPGGRLHMHLRTCSTSTAPPA*LQRTAT
Trigger: TGTCGCTGTTCGTTGGAGGCACGCTGGTGGTGCTGT...GCTGGTGGAGCAGGTTCTGAGGTGCATGTGCAGCCTCCCTCCAGGATCAGCTGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000105369.8
ENSMUST00000147778.9
ENSMUST00000169546.9
ENSMUST00000170219.9
CDS-3UTR GCA 90 bp GGCACTGTTTCAGGCCCAGCAGCCTTGGCACCCCGGGTACCTGCATCTAACGAACCTCCCAGCAGCGTTTaGAGAGCAGAAGAACGCCAG +
Preference number: 4 (lower is better)
Translates to: GTVSGPAALAPRVPASNEPPSSV*RAEERQ
Trigger: CTGGCGTTCTTCTGCTCTGCAAACGCTGCTGGGAGG...TTCGTTAGATGCAGGTACCCGGGGTGCCAAGGCTGCTGGGCCTGAAACAGTGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000147778.9
CDS-3UTR GCA 90 bp TCAGCTGATCCTGGAGGGAGGCTGCACATGCACCTCAGAACCTGCTCCACCAGCCCTCCCAGCAGCGTTTaGAGAGCAGAAGAACGCCAG +
Preference number: 4 (lower is better)
Translates to: SADPGGRLHMHLRTCSTSPPSSV*RAEERQ
Trigger: CTGGCGTTCTTCTGCTCTGCAAACGCTGCTGGGAGG...GCTGGTGGAGCAGGTTCTGAGGTGCATGTGCAGCCTCCCTCCAGGATCAGCTGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000105369.8
ENSMUST00000147778.9
ENSMUST00000169546.9
ENSMUST00000170219.9
CDS-3UTR GCA 90 bp ACCATATATGGACCGGAGAGTCCAGTCTCGTCATCCTCCCTGCAGTTGAGCCTGACCCGGAGGAGCCTGTaGCCATCTCCCCAGGCACTG +
Preference number: 4 (lower is better)
Translates to: TIYGPESPVSSSSLQLSLTRRSL*PSPQAL
Trigger: CAGTGCCTGGGGAGATGGGCACAGGCTCCTCCGGGT...CAGGCTCAACTGCAGGGAGGATGACGAGACTGGACTCTCCGGTCCATATATGGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000105369.8
ENSMUST00000169546.9
ENSMUST00000170219.9
CDS-3UTR GCA 90 bp GGGAAACTTGAAGCTGCCACCTGGGCTGTTCTGTCCGTTGTGTCCAAAGCCCAAGCGTCCTGCTCTTGCTaGGGGTCCTGCTGCTGCGCA +
Preference number: 4 (lower is better)
Translates to: GKLEAATWAVLSVVSKAQASCSC*GSCCCA
Trigger: TGCGCAGCAGCAGGACCCGCAGCAAGAGCAGGACGC...TTGGGCTTTGGACACAACGGACAGAACAGCCCAGGTGGCAGCTTCAAGTTTCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000105369.8
ENSMUST00000169546.9
ENSMUST00000170219.9
CDS-3UTR GCA 90 bp GATCCTGGAGGGAGGCTGCACATGCACCTCAGAACCTGCTCCACCAGCATCTGTGGTCATTGCCGCTGCTaGTGTGGTCCGATGCAGTGG +
Preference number: 4 (lower is better)
Translates to: DPGGRLHMHLRTCSTSICGHCRC*CGPMQW
Trigger: CCACTGCATCGGACCACAGCAGCAGCGGCAATGACC...ACAGATGCTGGTGGAGCAGGTTCTGAGGTGCATGTGCAGCCTCCCTCCAGGATC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000105369.8
ENSMUST00000169546.9
ENSMUST00000170219.9
CDS-3UTR GCA 90 bp GCAGGCGCGGTCGGTTATTGCTCAGAGAGGAAAGGTAGAGCGCATACCATGGACCCGAGCTATCGCCGCTaGGCACTGAGTCGCGGTCAT +
Preference number: 4 (lower is better)
Translates to: AGAVGYCSERKGRAHTMDPSYRR*ALSRGH
Trigger: ATGACCGCGACTCAGTGCGCAGCGGCGATAGCTCGG...GTCCATGGTATGCGCTCTACCTTTCCTCTCTGAGCAATAACCGACCGCGCCTGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000105369.8
ENSMUST00000169546.9
ENSMUST00000170219.9
CDS-3UTR GCA 90 bp TGCGCTAAGTGCCCAGGGGACACTATATGTGCACACTTGGGATTTGGGGGCCGTCCGAGCTATCGCCGCTaGGCACTGAGTCGCGGTCAT +
Preference number: 4 (lower is better)
Translates to: CAKCPGDTICAHLGFGGRPSYRR*ALSRGH
Trigger: ATGACCGCGACTCAGTGCGCAGCGGCGATAGCTCGG...ACGGCCCCCAAATCCCAAGTGTGCACATATAGTGTCCCCTGGGCACTTAGCGCA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000105369.8
ENSMUST00000169546.9
ENSMUST00000170219.9
CDS-3UTR GCA 90 bp CATATATGGACCGGAGAGTCCAGTCTCGTCATCCTCCCTGCAGTTGAGCCTGGGCTCCGCGCCCCTCGATaGTCGCATAGCCACTGTCCA +
Preference number: 4 (lower is better)
Translates to: HIWTGESSLVILPAVEPGLRAPR*SHSHCP
Trigger: TGGACAGTGGCTATGCGAGCATCGAGGGGCGCGGAG...CCCAGGCTCAACTGCAGGGAGGATGACGAGACTGGACTCTCCGGTCCATATATG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000105369.8
ENSMUST00000169546.9
ENSMUST00000170219.9
CDS-3UTR GCA 90 bp TGCAGAGAGCAGGCGCGGTCGGTTATTGCTCAGAGAGGAAAGGTAGAGCGCATAGGCTGCGGGGAGGACTaGGGGCTGGAGCAGGAAGTT +
Preference number: 4 (lower is better)
Translates to: CREQARSVIAQRGKVERIGCGED*GLEQEV
Trigger: AACTTCCTGCTCCAGCCCGCAGTCCTCCCCGCAGCC...TATGCGCTCTACCTTTCCTCTCTGAGCAATAACCGACCGCGCCTGCTCTCTGCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000105369.8
ENSMUST00000169546.9
ENSMUST00000170219.9
CDS-3UTR GCA 90 bp TGCGCTAAGTGCCCAGGGGACACTATATGTGCACACTTGGGATTTGGGGGCCGTCCGTCTTCTCGTCGATaGTGTAATCGCGGCGCGGCC +
Preference number: 4 (lower is better)
Translates to: CAKCPGDTICAHLGFGGRPSSRR*CNRGAA
Trigger: GGCCGCGCCGCGATTACAGCATCGACGAGAAGACGG...ACGGCCCCCAAATCCCAAGTGTGCACATATAGTGTCCCCTGGGCACTTAGCGCA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000105369.8
ENSMUST00000169546.9
ENSMUST00000170219.9
CDS-3UTR CCA 90 bp GCAGGCGCGGTCGGTTATTGCTCAGAGAGGAAAGGTAGAGCGCATACCATGGACGCCCTGTTGAAGCGCTaGTGCACCTCCCAGCAGCGT +
Preference number: 4 (lower is better)
Translates to: AGAVGYCSERKGRAHTMDALLKR*CTSQQR
Trigger: ACGCTGCTGGGAGGTGCACCAGCGCTTCAACAGGGC...GTCCATGGTATGCGCTCTACCTTTCCTCTCTGAGCAATAACCGACCGCGCCTGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000105369.8
ENSMUST00000147778.9
ENSMUST00000169546.9
ENSMUST00000170219.9
CDS-3UTR CCA 90 bp CCTGTGCACATGCAGAGAGCAGGCGCGGTCGGTTATTGCTCAGAGAGGAAAGGTGCCCTGTTGAAGCGCTaGTGCACCTCCCAGCAGCGT +
Preference number: 4 (lower is better)
Translates to: PVHMQRAGAVGYCSERKGALLKR*CTSQQR
Trigger: ACGCTGCTGGGAGGTGCACCAGCGCTTCAACAGGGC...ACCTTTCCTCTCTGAGCAATAACCGACCGCGCCTGCTCTCTGCATGTGCACAGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000105369.8
ENSMUST00000147778.9
ENSMUST00000169546.9
ENSMUST00000170219.9
CDS-3UTR CCA 90 bp CATATATGGACCGGAGAGTCCAGTCTCGTCATCCTCCCTGCAGTTGAGCCTGGGGGCGGTAGGTGGAGGTaGGTGAGGCGGGCATTCTTG +
Preference number: 4 (lower is better)
Translates to: HIWTGESSLVILPAVEPGGGRWR*VRRAFL
Trigger: CAAGAATGCCCGCCTCACCCACCTCCACCTACCGCC...CCCAGGCTCAACTGCAGGGAGGATGACGAGACTGGACTCTCCGGTCCATATATG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000105369.8
ENSMUST00000169546.9
ENSMUST00000170219.9
CDS-3UTR CCA 90 bp GCAGGCGCGGTCGGTTATTGCTCAGAGAGGAAAGGTAGAGCGCATACCATGGACCTGGGGCCGACTGAGTaGCCGGTGAGGGTTTTCCCA +
Preference number: 4 (lower is better)
Translates to: AGAVGYCSERKGRAHTMDLGPTE*PVRVFP
Trigger: TGGGAAAACCCTCACCGGCCACTCAGTCGGCCCCAG...GTCCATGGTATGCGCTCTACCTTTCCTCTCTGAGCAATAACCGACCGCGCCTGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000105369.8
ENSMUST00000169546.9
ENSMUST00000170219.9
CDS-3UTR CCA 90 bp CTTGAAGCTGCCACCTGGGCTGTTCTGTCCGTTGTGTCCAAAGCCCAAGGCTCTTGGCTCCATCCAGGCTaGCATGTCGGCGTAGCCGAG +
Preference number: 4 (lower is better)
Translates to: LEAATWAVLSVVSKAQGSWLHPG*HVGVAE
Trigger: CTCGGCTACGCCGACATGCCAGCCTGGATGGAGCCA...AGAGCCTTGGGCTTTGGACACAACGGACAGAACAGCCCAGGTGGCAGCTTCAAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000105369.8
ENSMUST00000169546.9
ENSMUST00000170219.9
3UTR CAA 72 bp TGCGCTAAGTGCCCAGGGGACACTATATGTGCACACTaGGGATTTGGGGGCCGTGTACCCATGCACGGCCAC +
Preference number: 4 (lower is better)
Translates to: CAKCPGDTICAH*GFGGRVPMHGH
Trigger: GTGGCCGTGCATGGGTACACGGCCCCCAAATCCCAAGTGTGCACATATAGTGTCCCCTGGGCACTTAGCGCA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENSMUST00000105369.8
ENSMUST00000147778.9
ENSMUST00000169546.9
ENSMUST00000170219.9
CDS-3UTR TCA 90 bp GGCCAGAGGCTGGGTGCTGGGGTCAACCATATATGGACCGGAGAGTCCAGTCTCTGGAGCAGGAAGTTCTaGAACTTCGTCGCCTGCTCC +
Preference number: 4 (lower is better)
Translates to: GQRLGAGVNHIWTGESSLWSRKF*NFVACS
Trigger: GGAGCAGGCGACGAAGTTTCAGAACTTCCTGCTCCA...GAGACTGGACTCTCCGGTCCATATATGGTTGACCCCAGCACCCAGCCTCTGGCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000105369.8
ENSMUST00000169546.9
ENSMUST00000170219.9
CDS-3UTR TCA 90 bp GGAAATCCCCTTCTGTCAGGGTGTACCGGCGGCCCTTGTCCTGAGCCTTGCGGCTTAAGGAAACAGAGATaGGTCGGACTCGAACTGCGC +
Preference number: 4 (lower is better)
Translates to: GNPLLSGCTGGPCPEPCGLRKQR*VGLELR
Trigger: GCGCAGTTCGAGTCCGACTCATCTCTGTTTCCTTAA...GCCGCAAGGCTCAGGACAAGGGCCGCCGGTACACCCTGACAGAAGGGGATTTCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000123967.2
ENSMUST00000147778.9
CDS-3UTR GCA 90 bp GAGCCTCTTGCTTCCGGAGGCCACTGCGCTAAGTGCCCAGGGGACACTATATGTACAGCACCACCAGCGTaGCTCCAACGAACAGCGACA +
Preference number: 4 (lower is better)
Translates to: EPLASGGHCAKCPGDTICTAPPA*LQRTAT
Trigger: TGTCGCTGTTCGTTGGAGGCACGCTGGTGGTGCTGT...ACATATAGTGTCCCCTGGGCACTTAGCGCAGTGGCCTCCGGAAGCAAGAGGCTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000105369.8
ENSMUST00000147778.9
ENSMUST00000169546.9
ENSMUST00000170219.9
CDS-3UTR GCA 90 bp GCTTCCGGAGGCCACTGCGCTAAGTGCCCAGGGGACACTATATGTGCACACTTGCCTCCCAGCAGCGTTTaGAGAGCAGAAGAACGCCAG +
Preference number: 4 (lower is better)
Translates to: ASGGHCAKCPGDTICAHLPPSSV*RAEERQ
Trigger: CTGGCGTTCTTCTGCTCTGCAAACGCTGCTGGGAGG...CAAGTGTGCACATATAGTGTCCCCTGGGCACTTAGCGCAGTGGCCTCCGGAAGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000105369.8
ENSMUST00000147778.9
ENSMUST00000169546.9
ENSMUST00000170219.9
CDS-3UTR GCA 90 bp CGGGGAGCCTGTGCACATGCAGAGAGCAGGCGCGGTCGGTTATTGCTCAGAGAGAGTGGTGGTCTTCTCTaGTTCCTCCATGGCCCTGTT +
Preference number: 4 (lower is better)
Translates to: RGACAHAESRRGRLLLRESGGLL*FLHGPV
Trigger: AACAGGGCCATGGAGGAAGCAGAGAAGACCACCACT...CTCTCTGAGCAATAACCGACCGCGCCTGCTCTCTGCATGTGCACAGGCTCCCCG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000105369.8
ENSMUST00000147778.9
ENSMUST00000169546.9
ENSMUST00000170219.9
CDS-3UTR GCA 90 bp CGGGGAGCCTGTGCACATGCAGAGAGCAGGCGCGGTCGGTTATTGCTCAGAGAGCTGCATCTAACGAAATaGCCTCCCCAGAGTCACTGG +
Preference number: 4 (lower is better)
Translates to: RGACAHAESRRGRLLLRELHLTK*PPQSHW
Trigger: CCAGTGACTCTGGGGAGGGCATTTCGTTAGATGCAG...CTCTCTGAGCAATAACCGACCGCGCCTGCTCTCTGCATGTGCACAGGCTCCCCG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000105369.8
ENSMUST00000169546.9
ENSMUST00000170219.9
CDS-3UTR GCA 90 bp TGCAGAGAGCAGGCGCGGTCGGTTATTGCTCAGAGAGGAAAGGTAGAGCGCATAGGGACGTCCCCCTCCTaGTCCATGCTCTCACTGGCT +
Preference number: 4 (lower is better)
Translates to: CREQARSVIAQRGKVERIGTSPS*SMLSLA
Trigger: AGCCAGTGAGAGCATGGAGCAGGAGGGGGACGTCCC...TATGCGCTCTACCTTTCCTCTCTGAGCAATAACCGACCGCGCCTGCTCTCTGCA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000105369.8
ENSMUST00000169546.9
ENSMUST00000170219.9
CDS-3UTR GCA 90 bp CTAAGTGCCCAGGGGACACTATATGTGCACACTTGGGATTTGGGGGCCGTGTACGGGACGTCCCCCTCCTaGTCCATGCTCTCACTGGCT +
Preference number: 4 (lower is better)
Translates to: LSAQGTLYVHTWDLGAVYGTSPS*SMLSLA
Trigger: AGCCAGTGAGAGCATGGAGCAGGAGGGGGACGTCCC...GTACACGGCCCCCAAATCCCAAGTGTGCACATATAGTGTCCCCTGGGCACTTAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENSMUST00000105369.8
ENSMUST00000169546.9
ENSMUST00000170219.9
CDS-3UTR GCA 90 bp TGCAGAGAGCAGGCGCGGTCGGTTATTGCTCAGAGAGGAAAGGTAGAGCGCATACGCGGTCATTGCCGCTaGTGCTGTGGTCCGATGCAG +
Preference number: 4 (lower is better)
Translates to: CREQARSVIAQRGKVERIRGHCR*CCGPMQ
Trigger: CTGCATCGGACCACAGCAGCAGCGGCAATGACCGCG...TATGCGCTCTACCTTTCCTCTCTGAGCAATAACCGACCGCGCCTGCTCTCTGCA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000105369.8
ENSMUST00000169546.9
ENSMUST00000170219.9
CDS-3UTR GCA 90 bp TGCAGAGAGCAGGCGCGGTCGGTTATTGCTCAGAGAGGAAAGGTAGAGCGCATACTGAGTCGCGGTCATTaGCGCTGCTGCTGTGGTCCG +
Preference number: 4 (lower is better)
Translates to: CREQARSVIAQRGKVERILSRGH*RCCCGP
Trigger: CGGACCACAGCAGCAGCGGCAATGACCGCGACTCAG...TATGCGCTCTACCTTTCCTCTCTGAGCAATAACCGACCGCGCCTGCTCTCTGCA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000105369.8
ENSMUST00000169546.9
ENSMUST00000170219.9
CDS-3UTR GCA 90 bp AACTTGAAGCTGCCACCTGGGCTGTTCTGTCCGTTGTGTCCAAAGCCCAAGGCTCCGAGCTATCGCCGCTaGGCACTGAGTCGCGGTCAT +
Preference number: 4 (lower is better)
Translates to: NLKLPPGLFCPLCPKPKAPSYRR*ALSRGH
Trigger: ATGACCGCGACTCAGTGCGCAGCGGCGATAGCTCGG...AGCCTTGGGCTTTGGACACAACGGACAGAACAGCCCAGGTGGCAGCTTCAAGTT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000105369.8
ENSMUST00000169546.9
ENSMUST00000170219.9
CDS-3UTR CCA 90 bp GGGAAACTTGAAGCTGCCACCTGGGCTGTTCTGTCCGTTGTGTCCAAAGCCCAACTGGGGCCGACTGAGTaGCCGGTGAGGGTTTTCCCA +
Preference number: 4 (lower is better)
Translates to: GKLEAATWAVLSVVSKAQLGPTE*PVRVFP
Trigger: TGGGAAAACCCTCACCGGCCACTCAGTCGGCCCCAG...TTGGGCTTTGGACACAACGGACAGAACAGCCCAGGTGGCAGCTTCAAGTTTCCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000105369.8
ENSMUST00000169546.9
ENSMUST00000170219.9
CDS-3UTR CCA 90 bp CATATATGGACCGGAGAGTCCAGTCTCGTCATCCTCCCTGCAGTTGAGCCTGGGCTCTCGTGTCCAGACTaGACGCTCTCTGGCTGGGCT +
Preference number: 4 (lower is better)
Translates to: HIWTGESSLVILPAVEPGLSCPD*TLSGWA
Trigger: AGCCCAGCCAGAGAGCGTCCAGTCTGGACACGAGAG...CCCAGGCTCAACTGCAGGGAGGATGACGAGACTGGACTCTCCGGTCCATATATG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000105369.8
ENSMUST00000169546.9
ENSMUST00000170219.9
CDS-3UTR CCA 90 bp ACCATATATGGACCGGAGAGTCCAGTCTCGTCATCCTCCCTGCAGTTGAGCCTGGCTCCATGCTCTCACTaGCTGCCCGCTGCCGCTGAA +
Preference number: 4 (lower is better)
Translates to: TIYGPESPVSSSSLQLSLAPCSH*LPAAAE
Trigger: TTCAGCGGCAGCGGGCAGCCAGTGAGAGCATGGAGC...CAGGCTCAACTGCAGGGAGGATGACGAGACTGGACTCTCCGGTCCATATATGGT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000105369.8
ENSMUST00000169546.9
ENSMUST00000170219.9
CDS-3UTR CCA 90 bp GATCCTCAGTGCCCCACAGTCACTTCACCTCCAGTAGGTTCGCTCACACAGTGGTTGCCGCTGCTGCTGTaGTCCGATGCAGTGGCTGCA +
Preference number: 4 (lower is better)
Translates to: DPQCPTVTSPPVGSLTQWLPLLL*SDAVAA
Trigger: TGCAGCCACTGCATCGGACCACAGCAGCAGCGGCAA...CCACTGTGTGAGCGAACCTACTGGAGGTGAAGTGACTGTGGGGCACTGAGGATC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000105369.8
ENSMUST00000169546.9
ENSMUST00000170219.9
CDS-3UTR CCA 90 bp GCCAGAGGCTGGGTGCTGGGGTCAACCATATATGGACCGGAGAGTCCAGTCTCGGCGACAATCAGCACCTaGGATGAGGCAACTGGCTCA +
Preference number: 4 (lower is better)
Translates to: ARGWVLGSTIYGPESPVSATIST*DEATGS
Trigger: TGAGCCAGTTGCCTCATCCCAGGTGCTGATTGTCGC...CGAGACTGGACTCTCCGGTCCATATATGGTTGACCCCAGCACCCAGCCTCTGGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000105369.8
ENSMUST00000169546.9
ENSMUST00000170219.9
CDS-3UTR TCA 90 bp TCAGCTGATCCTGGAGGGAGGCTGCACATGCACCTCAGAACCTGCTCCACCAGCCGGGCATTCTTGAGGTaGTGGAAATCCCCTTCTGTC +
Preference number: 4 (lower is better)
Translates to: SADPGGRLHMHLRTCSTSRAFLR*WKSPSV
Trigger: GACAGAAGGGGATTTCCATCACCTCAAGAATGCCCG...GCTGGTGGAGCAGGTTCTGAGGTGCATGTGCAGCCTCCCTCCAGGATCAGCTGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000105369.8
ENSMUST00000169546.9
ENSMUST00000170219.9
CDS-3UTR TCA 90 bp ATCCTGGAGGGAGGCTGCACATGCACCTCAGAACCTGCTCCACCAGCATCTGTGTGGAGCAGGAAGTTCTaGAACTTCGTCGCCTGCTCC +
Preference number: 4 (lower is better)
Translates to: ILEGGCTCTSEPAPPASVWSRKF*NFVACS
Trigger: GGAGCAGGCGACGAAGTTTCAGAACTTCCTGCTCCA...CACAGATGCTGGTGGAGCAGGTTCTGAGGTGCATGTGCAGCCTCCCTCCAGGAT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000105369.8
ENSMUST00000169546.9
ENSMUST00000170219.9
CDS-3UTR GCA 90 bp CCTGTGCACATGCAGAGAGCAGGCGCGGTCGGTTATTGCTCAGAGAGGAAAGGTACAGCACCACCAGCGTaGCTCCAACGAACAGCGACA +
Preference number: 4 (lower is better)
Translates to: PVHMQRAGAVGYCSERKGTAPPA*LQRTAT
Trigger: TGTCGCTGTTCGTTGGAGGCACGCTGGTGGTGCTGT...ACCTTTCCTCTCTGAGCAATAACCGACCGCGCCTGCTCTCTGCATGTGCACAGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000105369.8
ENSMUST00000147778.9
ENSMUST00000169546.9
ENSMUST00000170219.9
CDS-3UTR GCA 90 bp CCTGTGCACATGCAGAGAGCAGGCGCGGTCGGTTATTGCTCAGAGAGGAAAGGTCTGTTGAAGCGCTGGTaGACCTCCCAGCAGCGTTTG +
Preference number: 4 (lower is better)
Translates to: PVHMQRAGAVGYCSERKGLLKRW*TSQQRL
Trigger: CAAACGCTGCTGGGAGGTGCACCAGCGCTTCAACAG...ACCTTTCCTCTCTGAGCAATAACCGACCGCGCCTGCTCTCTGCATGTGCACAGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000105369.8
ENSMUST00000147778.9
ENSMUST00000169546.9
ENSMUST00000170219.9
CDS-3UTR GCA 90 bp GATCCTCAGTGCCCCACAGTCACTTCACCTCCAGTAGGTTCGCTCACACAGTGGCTGTTGAAGCGCTGGTaGACCTCCCAGCAGCGTTTG +
Preference number: 4 (lower is better)
Translates to: DPQCPTVTSPPVGSLTQWLLKRW*TSQQRL
Trigger: CAAACGCTGCTGGGAGGTGCACCAGCGCTTCAACAG...CCACTGTGTGAGCGAACCTACTGGAGGTGAAGTGACTGTGGGGCACTGAGGATC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000105369.8
ENSMUST00000147778.9
ENSMUST00000169546.9
ENSMUST00000170219.9
CDS-3UTR GCA 90 bp CCTCCAGTAGGTTCGCTCACACAGTGGCAGGCAGTGTTACTGCCTGCCAGTGCTCCTTGTCCTGAGCCTTaGGGCTCTGTTCAAACAGGG +
Preference number: 4 (lower is better)
Translates to: PPVGSLTQWQAVLLPASAPCPEP*GSVQTG
Trigger: CCCTGTTTGAACAGAGCCGCAAGGCTCAGGACAAGG...AGCACTGGCAGGCAGTAACACTGCCTGCCACTGTGTGAGCGAACCTACTGGAGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000105369.8
ENSMUST00000169546.9
ENSMUST00000170219.9
CDS-3UTR GCA 90 bp GCCAGAGGCTGGGTGCTGGGGTCAACCATATATGGACCGGAGAGTCCAGTCTCGCTGCATCTAACGAAATaGCCTCCCCAGAGTCACTGG +
Preference number: 4 (lower is better)
Translates to: ARGWVLGSTIYGPESPVSLHLTK*PPQSHW
Trigger: CCAGTGACTCTGGGGAGGGCATTTCGTTAGATGCAG...CGAGACTGGACTCTCCGGTCCATATATGGTTGACCCCAGCACCCAGCCTCTGGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000105369.8
ENSMUST00000169546.9
ENSMUST00000170219.9
CDS-3UTR GCA 90 bp AACTTGAAGCTGCCACCTGGGCTGTTCTGTCCGTTGTGTCCAAAGCCCAAGGCTCATGCTCTCACTGGCTaGCCGCTGCCGCTGAAAGTG +
Preference number: 4 (lower is better)
Translates to: NLKLPPGLFCPLCPKPKAHALTG*PLPLKV
Trigger: CACTTTCAGCGGCAGCGGGCAGCCAGTGAGAGCATG...AGCCTTGGGCTTTGGACACAACGGACAGAACAGCCCAGGTGGCAGCTTCAAGTT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000105369.8
ENSMUST00000169546.9
ENSMUST00000170219.9
CDS-3UTR CCA 90 bp GGGAAACTTGAAGCTGCCACCTGGGCTGTTCTGTCCGTTGTGTCCAAAGCCCAAGGCCGGTGGAGCTGGTaGCTAGGAAGCGCTCTGTTT +
Preference number: 4 (lower is better)
Translates to: GKLEAATWAVLSVVSKAQGRWSW*LGSALF
Trigger: AAACAGAGCGCTTCCTAGCCACCAGCTCCACCGGCC...TTGGGCTTTGGACACAACGGACAGAACAGCCCAGGTGGCAGCTTCAAGTTTCCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000105369.8
ENSMUST00000169546.9
ENSMUST00000170219.9
CDS-3UTR CCA 90 bp CTAAGTGCCCAGGGGACACTATATGTGCACACTTGGGATTTGGGGGCCGTGTACCTCTCGTGTCCAGACTaGACGCTCTCTGGCTGGGCT +
Preference number: 4 (lower is better)
Translates to: LSAQGTLYVHTWDLGAVYLSCPD*TLSGWA
Trigger: AGCCCAGCCAGAGAGCGTCCAGTCTGGACACGAGAG...GTACACGGCCCCCAAATCCCAAGTGTGCACATATAGTGTCCCCTGGGCACTTAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000105369.8
ENSMUST00000169546.9
ENSMUST00000170219.9
CDS-3UTR CCA 90 bp GGCCAGAGGCTGGGTGCTGGGGTCAACCATATATGGACCGGAGAGTCCAGTCTCTGGCGCAGGAACTCATaGAAAAGAGCGTCCGTCTTC +
Preference number: 4 (lower is better)
Translates to: GQRLGAGVNHIWTGESSLWRRNS*KRASVF
Trigger: GAAGACGGACGCTCTTTTCCATGAGTTCCTGCGCCA...GAGACTGGACTCTCCGGTCCATATATGGTTGACCCCAGCACCCAGCCTCTGGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000105369.8
ENSMUST00000169546.9
ENSMUST00000170219.9
CDS-3UTR CCA 90 bp ATCCTGGAGGGAGGCTGCACATGCACCTCAGAACCTGCTCCACCAGCATCTGTGGTCTCTCGTCGAGGCTaGCTGCTAGCTTGTCTAGCA +
Preference number: 4 (lower is better)
Translates to: ILEGGCTCTSEPAPPASVVSRRG*LLACLA
Trigger: TGCTAGACAAGCTAGCAGCCAGCCTCGACGAGAGAC...CACAGATGCTGGTGGAGCAGGTTCTGAGGTGCATGTGCAGCCTCCCTCCAGGAT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000105369.8
ENSMUST00000169546.9
ENSMUST00000170219.9
CDS-3UTR TCA 90 bp GCGCTAAGTGCCCAGGGGACACTATATGTGCACACTTGGGATTTGGGGGCCGTGCGGGCATTCTTGAGGTaGTGGAAATCCCCTTCTGTC +
Preference number: 4 (lower is better)
Translates to: ALSAQGTLYVHTWDLGAVRAFLR*WKSPSV
Trigger: GACAGAAGGGGATTTCCATCACCTCAAGAATGCCCG...CACGGCCCCCAAATCCCAAGTGTGCACATATAGTGTCCCCTGGGCACTTAGCGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENSMUST00000105369.8
ENSMUST00000169546.9
ENSMUST00000170219.9
CDS-3UTR TCA 90 bp GGAAACTTGAAGCTGCCACCTGGGCTGTTCTGTCCGTTGTGTCCAAAGCCCAAGGCGCTGGCAATGTACTaGATGAAGTCGGCATGGGGG +
Preference number: 4 (lower is better)
Translates to: GNLKLPPGLFCPLCPKPKALAMY*MKSAWG
Trigger: CCCCCATGCCGACTTCATTCAGTACATTGCCAGCGC...CTTGGGCTTTGGACACAACGGACAGAACAGCCCAGGTGGCAGCTTCAAGTTTCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000105369.8
ENSMUST00000169546.9
ENSMUST00000170219.9
CDS-3UTR TCA 90 bp GAGCCTCTTGCTTCCGGAGGCCACTGCGCTAAGTGCCCAGGGGACACTATATGTGTAAGGAAACAGAGATaGGTCGGACTCGAACTGCGC +
Preference number: 4 (lower is better)
Translates to: EPLASGGHCAKCPGDTICVRKQR*VGLELR
Trigger: GCGCAGTTCGAGTCCGACTCATCTCTGTTTCCTTAC...ACATATAGTGTCCCCTGGGCACTTAGCGCAGTGGCCTCCGGAAGCAAGAGGCTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000169546.9
CDS-3UTR GCA 90 bp GGAAACTTGAAGCTGCCACCTGGGCTGTTCTGTCCGTTGTGTCCAAAGCCCAAGACAGCACCACCAGCGTaGCTCCAACGAACAGCGACA +
Preference number: 4 (lower is better)
Translates to: GNLKLPPGLFCPLCPKPKTAPPA*LQRTAT
Trigger: TGTCGCTGTTCGTTGGAGGCACGCTGGTGGTGCTGT...CTTGGGCTTTGGACACAACGGACAGAACAGCCCAGGTGGCAGCTTCAAGTTTCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000105369.8
ENSMUST00000147778.9
ENSMUST00000169546.9
ENSMUST00000170219.9
CDS-3UTR GCA 90 bp CTAAGTGCCCAGGGGACACTATATGTGCACACTTGGGATTTGGGGGCCGTGTACCCTCCCAGCAGCGTTTaGAGAGCAGAAGAACGCCAG +
Preference number: 4 (lower is better)
Translates to: LSAQGTLYVHTWDLGAVYPPSSV*RAEERQ
Trigger: CTGGCGTTCTTCTGCTCTGCAAACGCTGCTGGGAGG...GTACACGGCCCCCAAATCCCAAGTGTGCACATATAGTGTCCCCTGGGCACTTAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENSMUST00000105369.8
ENSMUST00000147778.9
ENSMUST00000169546.9
ENSMUST00000170219.9
CDS-3UTR GCA 90 bp CTAAGTGCCCAGGGGACACTATATGTGCACACTTGGGATTTGGGGGCCGTGTACCTGTTGAAGCGCTGGTaGACCTCCCAGCAGCGTTTG +
Preference number: 4 (lower is better)
Translates to: LSAQGTLYVHTWDLGAVYLLKRW*TSQQRL
Trigger: CAAACGCTGCTGGGAGGTGCACCAGCGCTTCAACAG...GTACACGGCCCCCAAATCCCAAGTGTGCACATATAGTGTCCCCTGGGCACTTAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENSMUST00000105369.8
ENSMUST00000147778.9
ENSMUST00000169546.9
ENSMUST00000170219.9
CDS-3UTR GCA 90 bp AACTTGAAGCTGCCACCTGGGCTGTTCTGTCCGTTGTGTCCAAAGCCCAAGGCTCTGTTGAAGCGCTGGTaGACCTCCCAGCAGCGTTTG +
Preference number: 4 (lower is better)
Translates to: NLKLPPGLFCPLCPKPKALLKRW*TSQQRL
Trigger: CAAACGCTGCTGGGAGGTGCACCAGCGCTTCAACAG...AGCCTTGGGCTTTGGACACAACGGACAGAACAGCCCAGGTGGCAGCTTCAAGTT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000105369.8
ENSMUST00000147778.9
ENSMUST00000169546.9
ENSMUST00000170219.9
CDS-3UTR GCA 90 bp GGAGCCTGTGCACATGCAGAGAGCAGGCGCGGTCGGTTATTGCTCAGAGAGGAAAGCCGAGTGAAGAATTaGAAAACAGTGCCCGACCCG +
Preference number: 4 (lower is better)
Translates to: GACAHAESRRGRLLLREESRVKN*KTVPDP
Trigger: CGGGTCGGGCACTGTTTTGCAATTCTTCACTCGGCT...TTCCTCTCTGAGCAATAACCGACCGCGCCTGCTCTCTGCATGTGCACAGGCTCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000105369.8
ENSMUST00000169546.9
ENSMUST00000170219.9
CDS-3UTR CCA 90 bp CTTGAAGCTGCCACCTGGGCTGTTCTGTCCGTTGTGTCCAAAGCCCAAGGCTCTTGGACGCTCTCTGGCTaGGCTCCAGCTTCCATTTCT +
Preference number: 4 (lower is better)
Translates to: LEAATWAVLSVVSKAQGSWTLSG*APASIS
Trigger: AGAAATGGAAGCTGGAGCCCAGCCAGAGAGCGTCCA...AGAGCCTTGGGCTTTGGACACAACGGACAGAACAGCCCAGGTGGCAGCTTCAAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000105369.8
ENSMUST00000169546.9
ENSMUST00000170219.9
CDS-3UTR CCA 90 bp GCGCTAAGTGCCCAGGGGACACTATATGTGCACACTTGGGATTTGGGGGCCGTGTGGCGCAGGAACTCATaGAAAAGAGCGTCCGTCTTC +
Preference number: 4 (lower is better)
Translates to: ALSAQGTLYVHTWDLGAVWRRNS*KRASVF
Trigger: GAAGACGGACGCTCTTTTCCATGAGTTCCTGCGCCA...CACGGCCCCCAAATCCCAAGTGTGCACATATAGTGTCCCCTGGGCACTTAGCGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENSMUST00000105369.8
ENSMUST00000169546.9
ENSMUST00000170219.9
CDS-3UTR CCA 90 bp GCGCTAAGTGCCCAGGGGACACTATATGTGCACACTTGGGATTTGGGGGCCGTGGATGACAGGAATGGATaGGTCATCACCCGTGATGGG +
Preference number: 4 (lower is better)
Translates to: ALSAQGTLYVHTWDLGAVDDRNG*VITRDG
Trigger: CCCATCACGGGTGATGACCCATCCATTCCTGTCATC...CACGGCCCCCAAATCCCAAGTGTGCACATATAGTGTCCCCTGGGCACTTAGCGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000105369.8
ENSMUST00000169546.9
ENSMUST00000170219.9
CDS-3UTR CCA 90 bp GCAGGCGCGGTCGGTTATTGCTCAGAGAGGAAAGGTAGAGCGCATACCATGGACGTCTCTCGTCGAGGCTaGCTGCTAGCTTGTCTAGCA +
Preference number: 4 (lower is better)
Translates to: AGAVGYCSERKGRAHTMDVSRRG*LLACLA
Trigger: TGCTAGACAAGCTAGCAGCCAGCCTCGACGAGAGAC...GTCCATGGTATGCGCTCTACCTTTCCTCTCTGAGCAATAACCGACCGCGCCTGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000105369.8
ENSMUST00000169546.9
ENSMUST00000170219.9
CDS-3UTR GCA 90 bp TGCGCTAAGTGCCCAGGGGACACTATATGTGCACACTTGGGATTTGGGGGCCGTAGTGGTGGTCTTCTCTaGTTCCTCCATGGCCCTGTT +
Preference number: 4 (lower is better)
Translates to: CAKCPGDTICAHLGFGGRSGGLL*FLHGPV
Trigger: AACAGGGCCATGGAGGAAGCAGAGAAGACCACCACT...ACGGCCCCCAAATCCCAAGTGTGCACATATAGTGTCCCCTGGGCACTTAGCGCA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENSMUST00000105369.8
ENSMUST00000147778.9
ENSMUST00000169546.9
ENSMUST00000170219.9
CDS-3UTR GCA 90 bp ACCATATATGGACCGGAGAGTCCAGTCTCGTCATCCTCCCTGCAGTTGAGCCTGCCTTGTCCTGAGCCTTaGGGCTCTGTTCAAACAGGG +
Preference number: 4 (lower is better)
Translates to: TIYGPESPVSSSSLQLSLPCPEP*GSVQTG
Trigger: CCCTGTTTGAACAGAGCCGCAAGGCTCAGGACAAGG...CAGGCTCAACTGCAGGGAGGATGACGAGACTGGACTCTCCGGTCCATATATGGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000105369.8
ENSMUST00000169546.9
ENSMUST00000170219.9
CDS-3UTR GCA 90 bp TGCGCTAAGTGCCCAGGGGACACTATATGTGCACACTTGGGATTTGGGGGCCGTCTGCATCTAACGAAATaGCCTCCCCAGAGTCACTGG +
Preference number: 4 (lower is better)
Translates to: CAKCPGDTICAHLGFGGRLHLTK*PPQSHW
Trigger: CCAGTGACTCTGGGGAGGGCATTTCGTTAGATGCAG...ACGGCCCCCAAATCCCAAGTGTGCACATATAGTGTCCCCTGGGCACTTAGCGCA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENSMUST00000105369.8
ENSMUST00000169546.9
ENSMUST00000170219.9
CDS-3UTR GCA 90 bp CCTGTGCACATGCAGAGAGCAGGCGCGGTCGGTTATTGCTCAGAGAGGAAAGGTAGCCGAGTGAAGAATTaGAAAACAGTGCCCGACCCG +
Preference number: 4 (lower is better)
Translates to: PVHMQRAGAVGYCSERKGSRVKN*KTVPDP
Trigger: CGGGTCGGGCACTGTTTTGCAATTCTTCACTCGGCT...ACCTTTCCTCTCTGAGCAATAACCGACCGCGCCTGCTCTCTGCATGTGCACAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000105369.8
ENSMUST00000169546.9
ENSMUST00000170219.9
CDS-3UTR CCA 90 bp GGGAAACTTGAAGCTGCCACCTGGGCTGTTCTGTCCGTTGTGTCCAAAGCCCAAGTCTCTCGTCGAGGCTaGCTGCTAGCTTGTCTAGCA +
Preference number: 4 (lower is better)
Translates to: GKLEAATWAVLSVVSKAQVSRRG*LLACLA
Trigger: TGCTAGACAAGCTAGCAGCCAGCCTCGACGAGAGAC...TTGGGCTTTGGACACAACGGACAGAACAGCCCAGGTGGCAGCTTCAAGTTTCCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000105369.8
ENSMUST00000169546.9
ENSMUST00000170219.9
CDS-3UTR CCA 90 bp ACCATATATGGACCGGAGAGTCCAGTCTCGTCATCCTCCCTGCAGTTGAGCCTGGCGACAATCAGCACCTaGGATGAGGCAACTGGCTCA +
Preference number: 4 (lower is better)
Translates to: TIYGPESPVSSSSLQLSLATIST*DEATGS
Trigger: TGAGCCAGTTGCCTCATCCCAGGTGCTGATTGTCGC...CAGGCTCAACTGCAGGGAGGATGACGAGACTGGACTCTCCGGTCCATATATGGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000105369.8
ENSMUST00000169546.9
ENSMUST00000170219.9
CDS-3UTR TCA 90 bp CTAAGTGCCCAGGGGACACTATATGTGCACACTTGGGATTTGGGGGCCGTGTACCGGGCATTCTTGAGGTaGTGGAAATCCCCTTCTGTC +
Preference number: 4 (lower is better)
Translates to: LSAQGTLYVHTWDLGAVYRAFLR*WKSPSV
Trigger: GACAGAAGGGGATTTCCATCACCTCAAGAATGCCCG...GTACACGGCCCCCAAATCCCAAGTGTGCACATATAGTGTCCCCTGGGCACTTAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENSMUST00000105369.8
ENSMUST00000169546.9
ENSMUST00000170219.9
CDS-3UTR TCA 90 bp GGTTATTGCTCAGAGAGGAAAGGTAGAGCGCATACCATGGACAGGGTAAATCAAATCGCCGCTGCGCACTaGGTCGCGGTCATTGCCGCT +
Preference number: 4 (lower is better)
Translates to: GYCSERKGRAHTMDRVNQIAAAH*VAVIAA
Trigger: AGCGGCAATGACCGCGACTCAGTGCGCAGCGGCGAT...TTGATTTACCCTGTCCATGGTATGCGCTCTACCTTTCCTCTCTGAGCAATAACC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000105369.8
ENSMUST00000169546.9
ENSMUST00000170219.9
CDS-3UTR GCA 90 bp TGTGGCCGCTGCACTGGCCTCCCCCGAATCACACTCATGGATAGTAGCGATTTTAGTGGTGGTCTTCTCTaGTTCCTCCATGGCCCTGTT +
Preference number: 4 (lower is better)
Translates to: CGRCTGLPRITLMDSSDFSGGLL*FLHGPV
Trigger: AACAGGGCCATGGAGGAAGCAGAGAAGACCACCACT...AAAATCGCTACTATCCATGAGTGTGATTCGGGGGAGGCCAGTGCAGCGGCCACA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000147778.9
CDS-3UTR GCA 90 bp AACTTGAAGCTGCCACCTGGGCTGTTCTGTCCGTTGTGTCCAAAGCCCAAGGCTAGTGGTGGTCTTCTCTaGTTCCTCCATGGCCCTGTT +
Preference number: 4 (lower is better)
Translates to: NLKLPPGLFCPLCPKPKASGGLL*FLHGPV
Trigger: AACAGGGCCATGGAGGAAGCAGAGAAGACCACCACT...AGCCTTGGGCTTTGGACACAACGGACAGAACAGCCCAGGTGGCAGCTTCAAGTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000105369.8
ENSMUST00000147778.9
ENSMUST00000169546.9
ENSMUST00000170219.9
CDS-3UTR GCA 90 bp GGTTATTGCTCAGAGAGGAAAGGTAGAGCGCATACCATGGACAGGGTAAATCAAGGCTGCGGGGAGGACTaGGGGCTGGAGCAGGAAGTT +
Preference number: 4 (lower is better)
Translates to: GYCSERKGRAHTMDRVNQGCGED*GLEQEV
Trigger: AACTTCCTGCTCCAGCCCGCAGTCCTCCCCGCAGCC...TTGATTTACCCTGTCCATGGTATGCGCTCTACCTTTCCTCTCTGAGCAATAACC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000105369.8
ENSMUST00000169546.9
ENSMUST00000170219.9
CDS-3UTR CCA 90 bp AGTGGGCAGGCACTCACAGCGAGTCTGCCCTATCTTTTGGCAATAAATAAAGCTGGCGGTAGGTGGAGGTaGGTGAGGCGGGCATTCTTG +
Preference number: 4 (lower is better)
Translates to: SGQALTASLPYLLAINKAGGRWR*VRRAFL
Trigger: CAAGAATGCCCGCCTCACCCACCTCCACCTACCGCC...AGCTTTATTTATTGCCAAAAGATAGGGCAGACTCGCTGTGAGTGCCTGCCCACT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000105369.8
ENSMUST00000169546.9
ENSMUST00000170219.9
CDS-3UTR CCA 90 bp GGAAACTTGAAGCTGCCACCTGGGCTGTTCTGTCCGTTGTGTCCAAAGCCCAAGGATGACAGGAATGGATaGGTCATCACCCGTGATGGG +
Preference number: 4 (lower is better)
Translates to: GNLKLPPGLFCPLCPKPKDDRNG*VITRDG
Trigger: CCCATCACGGGTGATGACCCATCCATTCCTGTCATC...CTTGGGCTTTGGACACAACGGACAGAACAGCCCAGGTGGCAGCTTCAAGTTTCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000105369.8
ENSMUST00000169546.9
ENSMUST00000170219.9
CDS-3UTR CCA 90 bp TGCAGAGAGCAGGCGCGGTCGGTTATTGCTCAGAGAGGAAAGGTAGAGCGCATAGATGACAGGAATGGATaGGTCATCACCCGTGATGGG +
Preference number: 4 (lower is better)
Translates to: CREQARSVIAQRGKVERIDDRNG*VITRDG
Trigger: CCCATCACGGGTGATGACCCATCCATTCCTGTCATC...TATGCGCTCTACCTTTCCTCTCTGAGCAATAACCGACCGCGCCTGCTCTCTGCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000105369.8
ENSMUST00000169546.9
ENSMUST00000170219.9
CDS-3UTR CCA 90 bp GGTTATTGCTCAGAGAGGAAAGGTAGAGCGCATACCATGGACAGGGTAAATCAAGCACAACCCAGAGCCTaGGCAACCACCGCCTCCACC +
Preference number: 4 (lower is better)
Translates to: GYCSERKGRAHTMDRVNQAQPRA*ATTAST
Trigger: GGTGGAGGCGGTGGTTGCCCAGGCTCTGGGTTGTGC...TTGATTTACCCTGTCCATGGTATGCGCTCTACCTTTCCTCTCTGAGCAATAACC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000105369.8
ENSMUST00000169546.9
ENSMUST00000170219.9
CDS-3UTR TCA 90 bp GGTTATTGCTCAGAGAGGAAAGGTAGAGCGCATACCATGGACAGGGTAAATCAATGGAGCAGGAAGTTCTaGAACTTCGTCGCCTGCTCC +
Preference number: 4 (lower is better)
Translates to: GYCSERKGRAHTMDRVNQWSRKF*NFVACS
Trigger: GGAGCAGGCGACGAAGTTTCAGAACTTCCTGCTCCA...TTGATTTACCCTGTCCATGGTATGCGCTCTACCTTTCCTCTCTGAGCAATAACC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000105369.8
ENSMUST00000169546.9
ENSMUST00000170219.9
CDS-3UTR GCA 90 bp AAACCCAGAGCAAACAAATATGCAGAGACATTTATGATTAACCAGACAACACGAGCGTCCTGCTCTTGCTaGGGGTCCTGCTGCTGCGCA +
Preference number: 4 (lower is better)
Translates to: KPRANKYAETFMINQTTRASCSC*GSCCCA
Trigger: TGCGCAGCAGCAGGACCCGCAGCAAGAGCAGGACGC...TCGTGTTGTCTGGTTAATCATAAATGTCTCTGCATATTTGTTTGCTCTGGGTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000169546.9
ENSMUST00000170219.9
CDS-3UTR CCA 90 bp AAACCCAGAGCAAACAAATATGCAGAGACATTTATGATTAACCAGACAACACGAGCTCCATGCTCTCACTaGCTGCCCGCTGCCGCTGAA +
Preference number: 4 (lower is better)
Translates to: KPRANKYAETFMINQTTRAPCSH*LPAAAE
Trigger: TTCAGCGGCAGCGGGCAGCCAGTGAGAGCATGGAGC...TCGTGTTGTCTGGTTAATCATAAATGTCTCTGCATATTTGTTTGCTCTGGGTTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000169546.9
ENSMUST00000170219.9
CDS-3UTR CCA 90 bp ATAAAACAGGTGGATTTGAGCTATGGCTATGAGGGTGTTTGGAAATATGGAGCATGGCGCAGGAACTCATaGAAAAGAGCGTCCGTCTTC +
Preference number: 4 (lower is better)
Translates to: IKQVDLSYGYEGVWKYGAWRRNS*KRASVF
Trigger: GAAGACGGACGCTCTTTTCCATGAGTTCCTGCGCCA...TGCTCCATATTTCCAAACACCCTCATAGCCATAGCTCAAATCCACCTGTTTTAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000169546.9
ENSMUST00000170219.9
CDS-3UTR CCA 90 bp AAACCCAGAGCAAACAAATATGCAGAGACATTTATGATTAACCAGACAACACGATGGACGCTCTCTGGCTaGGCTCCAGCTTCCATTTCT +
Preference number: 4 (lower is better)
Translates to: KPRANKYAETFMINQTTRWTLSG*APASIS
Trigger: AGAAATGGAAGCTGGAGCCCAGCCAGAGAGCGTCCA...TCGTGTTGTCTGGTTAATCATAAATGTCTCTGCATATTTGTTTGCTCTGGGTTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000169546.9
ENSMUST00000170219.9
CDS-3UTR GCA 90 bp AAACCCAGAGCAAACAAATATGCAGAGACATTTATGATTAACCAGACAACACGAAGCCGAGTGAAGAATTaGAAAACAGTGCCCGACCCG +
Preference number: 4 (lower is better)
Translates to: KPRANKYAETFMINQTTRSRVKN*KTVPDP
Trigger: CGGGTCGGGCACTGTTTTGCAATTCTTCACTCGGCT...TCGTGTTGTCTGGTTAATCATAAATGTCTCTGCATATTTGTTTGCTCTGGGTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000169546.9
ENSMUST00000170219.9
CDS-3UTR CAA 90 bp ACGGGGAGCCTGTGCACATGCAGAGAGCAGGCGCGGTCGGTTATTGCTCAGAGAAGGCTGGCTGCTAGCTaGTCTAGCAGGGCCCCGGCG +
Preference number: 5 (lower is better)
Translates to: TGSLCTCREQARSVIAQRRLAAS*SSRAPA
Trigger: CGCCGGGGCCCTGCTAGACAAGCTAGCAGCCAGCCT...TCTCTGAGCAATAACCGACCGCGCCTGCTCTCTGCATGTGCACAGGCTCCCCGT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000105369.8
ENSMUST00000169546.9
ENSMUST00000170219.9
CDS-3UTR CAA 90 bp TTCAAACAGGGCAGCCTCGTTGAAGGACACGCGGCGGCCGGTGGAGCTGGTGGCACCTCCCAGCAGCGTTaGCAGAGCAGAAGAACGCCA +
Preference number: 5 (lower is better)
Translates to: FKQGSLVEGHAAAGGAGGTSQQR*QSRRTP
Trigger: TGGCGTTCTTCTGCTCTGCAAACGCTGCTGGGAGGT...GCCACCAGCTCCACCGGCCGCCGCGTGTCCTTCAACGAGGCTGCCCTGTTTGAA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000132523.8
ENSMUST00000147778.9
CDS-3UTR CAA 90 bp GATCCTGGAGGGAGGCTGCACATGCACCTCAGAACCTGCTCCACCAGCATCTGTAACAGGGCAGCCTCGTaGAAGGACACGCGGCGGCCG +
Preference number: 5 (lower is better)
Translates to: DPGGRLHMHLRTCSTSICNRAAS*KDTRRP
Trigger: CGGCCGCCGCGTGTCCTTCAACGAGGCTGCCCTGTT...ACAGATGCTGGTGGAGCAGGTTCTGAGGTGCATGTGCAGCCTCCCTCCAGGATC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000105369.8
ENSMUST00000169546.9
ENSMUST00000170219.9
CDS-3UTR CAA 90 bp CACTCATGGATAGTAGCGATTTTGAGGGGCGGTAGGTGGAGGTGGGTGAGGCGGAACAGGGCAGCCTCGTaGAAGGACACGCGGCGGCCG +
Preference number: 5 (lower is better)
Translates to: HSWIVAILRGGRWRWVRRNRAAS*KDTRRP
Trigger: CGGCCGCCGCGTGTCCTTCAACGAGGCTGCCCTGTT...CCGCCTCACCCACCTCCACCTACCGCCCCTCAAAATCGCTACTATCCATGAGTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000123967.2
CDS-3UTR CAA 90 bp GAGCCTCTTGCTTCCGGAGGCCACTGCGCTAAGTGCCCAGGGGACACTATATGTAGGCTGGCTGCTAGCTaGTCTAGCAGGGCCCCGGCG +
Preference number: 5 (lower is better)
Translates to: EPLASGGHCAKCPGDTICRLAAS*SSRAPA
Trigger: CGCCGGGGCCCTGCTAGACAAGCTAGCAGCCAGCCT...ACATATAGTGTCCCCTGGGCACTTAGCGCAGTGGCCTCCGGAAGCAAGAGGCTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000105369.8
ENSMUST00000169546.9
ENSMUST00000170219.9
CDS-3UTR CAA 90 bp TGCGCTAAGTGCCCAGGGGACACTATATGTGCACACTTGGGATTTGGGGGCCGTAGGCTGGCTGCTAGCTaGTCTAGCAGGGCCCCGGCG +
Preference number: 5 (lower is better)
Translates to: CAKCPGDTICAHLGFGGRRLAAS*SSRAPA
Trigger: CGCCGGGGCCCTGCTAGACAAGCTAGCAGCCAGCCT...ACGGCCCCCAAATCCCAAGTGTGCACATATAGTGTCCCCTGGGCACTTAGCGCA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENSMUST00000105369.8
ENSMUST00000169546.9
ENSMUST00000170219.9
CDS-3UTR CAA 90 bp ACCATATATGGACCGGAGAGTCCAGTCTCGTCATCCTCCCTGCAGTTGAGCCTGAACAGGGCAGCCTCGTaGAAGGACACGCGGCGGCCG +
Preference number: 5 (lower is better)
Translates to: TIYGPESPVSSSSLQLSLNRAAS*KDTRRP
Trigger: CGGCCGCCGCGTGTCCTTCAACGAGGCTGCCCTGTT...CAGGCTCAACTGCAGGGAGGATGACGAGACTGGACTCTCCGGTCCATATATGGT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000105369.8
ENSMUST00000169546.9
ENSMUST00000170219.9
CDS-3UTR CAA 90 bp GCCAGAGGCTGGGTGCTGGGGTCAACCATATATGGACCGGAGAGTCCAGTCTCGACCTCCCAGCAGCGTTaGCAGAGCAGAAGAACGCCA +
Preference number: 5 (lower is better)
Translates to: ARGWVLGSTIYGPESPVSTSQQR*QSRRTP
Trigger: TGGCGTTCTTCTGCTCTGCAAACGCTGCTGGGAGGT...CGAGACTGGACTCTCCGGTCCATATATGGTTGACCCCAGCACCCAGCCTCTGGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000105369.8
ENSMUST00000147778.9
ENSMUST00000169546.9
ENSMUST00000170219.9
CDS-3UTR CAA 90 bp ATCCTGGAGGGAGGCTGCACATGCACCTCAGAACCTGCTCCACCAGCATCTGTGACCTCCCAGCAGCGTTaGCAGAGCAGAAGAACGCCA +
Preference number: 5 (lower is better)
Translates to: ILEGGCTCTSEPAPPASVTSQQR*QSRRTP
Trigger: TGGCGTTCTTCTGCTCTGCAAACGCTGCTGGGAGGT...CACAGATGCTGGTGGAGCAGGTTCTGAGGTGCATGTGCAGCCTCCCTCCAGGAT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000105369.8
ENSMUST00000147778.9
ENSMUST00000169546.9
ENSMUST00000170219.9
CDS-3UTR CAA 90 bp GCTTCCGGAGGCCACTGCGCTAAGTGCCCAGGGGACACTATATGTGCACACTTGACCTCCCAGCAGCGTTaGCAGAGCAGAAGAACGCCA +
Preference number: 5 (lower is better)
Translates to: ASGGHCAKCPGDTICAHLTSQQR*QSRRTP
Trigger: TGGCGTTCTTCTGCTCTGCAAACGCTGCTGGGAGGT...CAAGTGTGCACATATAGTGTCCCCTGGGCACTTAGCGCAGTGGCCTCCGGAAGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000105369.8
ENSMUST00000147778.9
ENSMUST00000169546.9
ENSMUST00000170219.9
CDS-3UTR CAA 90 bp CAGGTGGATTTGAGCTATGGCTATGAGGGTGTTTGGAAATATGGAGCAGGCGGGAACAGGGCAGCCTCGTaGAAGGACACGCGGCGGCCG +
Preference number: 5 (lower is better)
Translates to: QVDLSYGYEGVWKYGAGGNRAAS*KDTRRP
Trigger: CGGCCGCCGCGTGTCCTTCAACGAGGCTGCCCTGTT...CCCGCCTGCTCCATATTTCCAAACACCCTCATAGCCATAGCTCAAATCCACCTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000169546.9
ENSMUST00000170219.9
CDS-3UTR CAA 90 bp GGAGCCTGTGCACATGCAGAGAGCAGGCGCGGTCGGTTATTGCTCAGAGAGGAAATAGCCAAGCTGTCCTaGGAGGTGGTAGCTGGGTGG +
Preference number: 5 (lower is better)
Translates to: GACAHAESRRGRLLLREEIAKLS*EVVAGW
Trigger: CCACCCAGCTACCACCTCCAAGGACAGCTTGGCTAT...TTCCTCTCTGAGCAATAACCGACCGCGCCTGCTCTCTGCATGTGCACAGGCTCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000105369.8
ENSMUST00000169546.9
ENSMUST00000170219.9
CDS-3UTR CAA 90 bp AACTTGAAGCTGCCACCTGGGCTGTTCTGTCCGTTGTGTCCAAAGCCCAAGGCTACTGAGTCGCGGTCATaGCCGCTGCTGCTGTGGTCC +
Preference number: 5 (lower is better)
Translates to: NLKLPPGLFCPLCPKPKATESRS*PLLLWS
Trigger: GGACCACAGCAGCAGCGGCAATGACCGCGACTCAGT...AGCCTTGGGCTTTGGACACAACGGACAGAACAGCCCAGGTGGCAGCTTCAAGTT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000105369.8
ENSMUST00000169546.9
ENSMUST00000170219.9
CDS-3UTR CAA 90 bp GGAAACTTGAAGCTGCCACCTGGGCTGTTCTGTCCGTTGTGTCCAAAGCCCAAGACTGAGTCGCGGTCATaGCCGCTGCTGCTGTGGTCC +
Preference number: 5 (lower is better)
Translates to: GNLKLPPGLFCPLCPKPKTESRS*PLLLWS
Trigger: GGACCACAGCAGCAGCGGCAATGACCGCGACTCAGT...CTTGGGCTTTGGACACAACGGACAGAACAGCCCAGGTGGCAGCTTCAAGTTTCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000105369.8
ENSMUST00000169546.9
ENSMUST00000170219.9
CDS GCA 90 bp AGCAGCGTTTGCAGAGCAGAAGAACGCCAGACAGCACCACCAGCGTaGCTCCAACGAACAGCGACATCACCACCACCAGCAGCACATAGT +
Preference number: 5 (lower is better)
Translates to: SSVCRAEERQTAPPA*LQRTATSPPPAAHS
Trigger: ACTATGTGCTGCTGGTGGTGGTGATGTCGCTGTTCGTTGGAGGCACGCTGGTGGTGCTGTCTGGCGTTCTTCTGCTCTGCAAACGCTGCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000105369.8
ENSMUST00000132523.8
ENSMUST00000147778.9
ENSMUST00000169546.9
ENSMUST00000170219.9
CDS-3UTR CAA 90 bp TGCAGAGAGCAGGCGCGGTCGGTTATTGCTCAGAGAGGAAAGGTAGAGCGCATACTGCCGTCCTCTCTGTaGCCATTGCTTCCGCGCATG +
Preference number: 5 (lower is better)
Translates to: CREQARSVIAQRGKVERILPSSL*PLLPRM
Trigger: CATGCGCGGAAGCAATGGCAACAGAGAGGACGGCAG...TATGCGCTCTACCTTTCCTCTCTGAGCAATAACCGACCGCGCCTGCTCTCTGCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000105369.8
ENSMUST00000169546.9
ENSMUST00000170219.9
CDS-3UTR CAA 90 bp CTAAGTGCCCAGGGGACACTATATGTGCACACTTGGGATTTGGGGGCCGTGTACCTGCCGTCCTCTCTGTaGCCATTGCTTCCGCGCATG +
Preference number: 5 (lower is better)
Translates to: LSAQGTLYVHTWDLGAVYLPSSL*PLLPRM
Trigger: CATGCGCGGAAGCAATGGCAACAGAGAGGACGGCAG...GTACACGGCCCCCAAATCCCAAGTGTGCACATATAGTGTCCCCTGGGCACTTAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000105369.8
ENSMUST00000169546.9
ENSMUST00000170219.9
CDS GCA 90 bp TATAGGGTGGGTGCCGTTGTCCAGATAAGTAGTGGTGGTCTTCTCTaGTTCCTCCATGGCCCTGTTGAAGCGCTGGTGCACCTCCCAGCA +
Preference number: 5 (lower is better)
Translates to: YRVGAVVQISSGGLL*FLHGPVEALVHLPA
Trigger: TGCTGGGAGGTGCACCAGCGCTTCAACAGGGCCATGGAGGAAGCAGAGAAGACCACCACTACTTATCTGGACAACGGCACCCACCCTATA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000105369.8
ENSMUST00000132523.8
ENSMUST00000147778.9
ENSMUST00000169546.9
ENSMUST00000170219.9
CDS-3UTR CAA 90 bp CTTGAAGCTGCCACCTGGGCTGTTCTGTCCGTTGTGTCCAAAGCCCAAGGCTCTTGGATAGTAGCGATTTaGAGGGGCGGTAGGTGGAGG +
Preference number: 5 (lower is better)
Translates to: LEAATWAVLSVVSKAQGSWIVAI*RGGRWR
Trigger: CCTCCACCTACCGCCCCTCAAAATCGCTACTATCCA...AGAGCCTTGGGCTTTGGACACAACGGACAGAACAGCCCAGGTGGCAGCTTCAAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000105369.8
ENSMUST00000169546.9
ENSMUST00000170219.9
CDS-3UTR CAA 90 bp ACCATATATGGACCGGAGAGTCCAGTCTCGTCATCCTCCCTGCAGTTGAGCCTGATAGCCAAGCTGTCCTaGGAGGTGGTAGCTGGGTGG +
Preference number: 5 (lower is better)
Translates to: TIYGPESPVSSSSLQLSLIAKLS*EVVAGW
Trigger: CCACCCAGCTACCACCTCCAAGGACAGCTTGGCTAT...CAGGCTCAACTGCAGGGAGGATGACGAGACTGGACTCTCCGGTCCATATATGGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000105369.8
ENSMUST00000169546.9
ENSMUST00000170219.9
CDS-3UTR CAA 90 bp GGTTATTGCTCAGAGAGGAAAGGTAGAGCGCATACCATGGACAGGGTAAATCAAACTGAGTCGCGGTCATaGCCGCTGCTGCTGTGGTCC +
Preference number: 5 (lower is better)
Translates to: GYCSERKGRAHTMDRVNQTESRS*PLLLWS
Trigger: GGACCACAGCAGCAGCGGCAATGACCGCGACTCAGT...TTGATTTACCCTGTCCATGGTATGCGCTCTACCTTTCCTCTCTGAGCAATAACC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000105369.8
ENSMUST00000169546.9
ENSMUST00000170219.9
CDS-3UTR CAA 90 bp AGTGGGCAGGCACTCACAGCGAGTCTGCCCTATCTTTTGGCAATAAATAAAGCTCTGCCGTCCTCTCTGTaGCCATTGCTTCCGCGCATG +
Preference number: 5 (lower is better)
Translates to: SGQALTASLPYLLAINKALPSSL*PLLPRM
Trigger: CATGCGCGGAAGCAATGGCAACAGAGAGGACGGCAG...AGCTTTATTTATTGCCAAAAGATAGGGCAGACTCGCTGTGAGTGCCTGCCCACT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000105369.8
ENSMUST00000169546.9
ENSMUST00000170219.9
CDS-3UTR CAA 90 bp GGTTATTGCTCAGAGAGGAAAGGTAGAGCGCATACCATGGACAGGGTAAATCAAACCTCCCAGCAGCGTTaGCAGAGCAGAAGAACGCCA +
Preference number: 5 (lower is better)
Translates to: GYCSERKGRAHTMDRVNQTSQQR*QSRRTP
Trigger: TGGCGTTCTTCTGCTCTGCAAACGCTGCTGGGAGGT...TTGATTTACCCTGTCCATGGTATGCGCTCTACCTTTCCTCTCTGAGCAATAACC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000105369.8
ENSMUST00000147778.9
ENSMUST00000169546.9
ENSMUST00000170219.9
CDS-3UTR CAA 90 bp AGTGGGCAGGCACTCACAGCGAGTCTGCCCTATCTTTTGGCAATAAATAAAGCTTGGATAGTAGCGATTTaGAGGGGCGGTAGGTGGAGG +
Preference number: 5 (lower is better)
Translates to: SGQALTASLPYLLAINKAWIVAI*RGGRWR
Trigger: CCTCCACCTACCGCCCCTCAAAATCGCTACTATCCA...AGCTTTATTTATTGCCAAAAGATAGGGCAGACTCGCTGTGAGTGCCTGCCCACT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000105369.8
ENSMUST00000169546.9
ENSMUST00000170219.9
CDS-3UTR CAA 90 bp ATAAAACAGGTGGATTTGAGCTATGGCTATGAGGGTGTTTGGAAATATGGAGCATGGATAGTAGCGATTTaGAGGGGCGGTAGGTGGAGG +
Preference number: 5 (lower is better)
Translates to: IKQVDLSYGYEGVWKYGAWIVAI*RGGRWR
Trigger: CCTCCACCTACCGCCCCTCAAAATCGCTACTATCCA...TGCTCCATATTTCCAAACACCCTCATAGCCATAGCTCAAATCCACCTGTTTTAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000169546.9
ENSMUST00000170219.9
CDS CAA 90 bp TTGTCCAAGATGGGGTCAGGCTCCGCCGTGGGGCGGCTGGTGGCATaGTCCCACGAAGTCGTCAGGGCAACAGTGGCGGTAGTGGCGGCC +
Preference number: 6 (lower is better)
Translates to: LSKMGSGSAVGRLVA*SHEVVRATVAVVAA
Trigger: GGCCGCCACTACCGCCACTGTTGCCCTGACGACTTCGTGGGACAATGCCACCAGCCGCCCCACGGCGGAGCCTGACCCCATCTTGGACAA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000105369.8
ENSMUST00000132523.8
ENSMUST00000147778.9
ENSMUST00000169546.9
ENSMUST00000170219.9
CDS CCA 72 bp CCAAGATGGGGTCAGGCTCCGCCGTGGGGCGGCTGGTaGCATTGTCCCACGAAGTCGTCAGGGCAACAGTGG +
Preference number: 6 (lower is better)
Translates to: PRWGQAPPWGGW*HCPTKSSGQQW
Trigger: CCACTGTTGCCCTGACGACTTCGTGGGACAATGCCACCAGCCGCCCCACGGCGGAGCCTGACCCCATCTTGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000105369.8
ENSMUST00000132523.8
ENSMUST00000147778.9
ENSMUST00000169546.9
ENSMUST00000170219.9
CDS CAA 72 bp ATGGGGTCAGGCTCCGCCGTGGGGCGGCTGGTGGCATaGTCCCACGAAGTCGTCAGGGCAACAGTGGCGGTA +
Preference number: 6 (lower is better)
Translates to: MGSGSAVGRLVA*SHEVVRATVAV
Trigger: TACCGCCACTGTTGCCCTGACGACTTCGTGGGACAATGCCACCAGCCGCCCCACGGCGGAGCCTGACCCCAT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000105369.8
ENSMUST00000132523.8
ENSMUST00000147778.9
ENSMUST00000169546.9
ENSMUST00000170219.9
CDS CCA 72 bp TGTCCAAGATGGGGTCAGGCTCCGCCGTGGGGCGGCTaGTGGCATTGTCCCACGAAGTCGTCAGGGCAACAG +
Preference number: 6 (lower is better)
Translates to: CPRWGQAPPWGG*WHCPTKSSGQQ
Trigger: CTGTTGCCCTGACGACTTCGTGGGACAATGCCACCAGCCGCCCCACGGCGGAGCCTGACCCCATCTTGGACA
65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000105369.8
ENSMUST00000132523.8
ENSMUST00000147778.9
ENSMUST00000169546.9
ENSMUST00000170219.9
CDS CAA 72 bp CTGCTTCCTCCATGGCCCGTGGGGCGGCTGGTGGCATaGTCCCACGAAGTCGTCAGGGCAACAGTGGCGGTA +
Preference number: 6 (lower is better)
Translates to: LLPPWPVGRLVA*SHEVVRATVAV
Trigger: TACCGCCACTGTTGCCCTGACGACTTCGTGGGACAATGCCACCAGCCGCCCCACGGGCCATGGAGGAAGCAG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000123967.2
CDS CAA 90 bp TCCTCCATGGCCCTGTTGAAGCGCTGGTGCACCTCCCAGCAGCGTTaGCAGAGCAGAAGAACGCCAGACAGCACCACCAGCGTGCCTCCA +
Preference number: 6 (lower is better)
Translates to: SSMALLKRWCTSQQR*QSRRTPDSTTSVPP
Trigger: TGGAGGCACGCTGGTGGTGCTGTCTGGCGTTCTTCTGCTCTGCAAACGCTGCTGGGAGGTGCACCAGCGCTTCAACAGGGCCATGGAGGA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000105369.8
ENSMUST00000132523.8
ENSMUST00000147778.9
ENSMUST00000169546.9
ENSMUST00000170219.9
CDS CCA 72 bp GCACATAGTTGTCCAAGATGGGGTCAGGCTCCGCCGTaGGGCGGCTGGTGGCATTGTCCCACGAAGTCGTCA +
Preference number: 6 (lower is better)
Translates to: AHSCPRWGQAPP*GGWWHCPTKSS
Trigger: TGACGACTTCGTGGGACAATGCCACCAGCCGCCCCACGGCGGAGCCTGACCCCATCTTGGACAACTATGTGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000105369.8
ENSMUST00000132523.8
ENSMUST00000147778.9
ENSMUST00000169546.9
ENSMUST00000170219.9
CDS CCA 72 bp ACATCACCACCACCAGCAGCACATAGTTGTCCAAGATaGGGTCAGGCTCCGCCGTGGGGCGGCTGGTGGCAT +
Preference number: 6 (lower is better)
Translates to: TSPPPAAHSCPR*GQAPPWGGWWH
Trigger: ATGCCACCAGCCGCCCCACGGCGGAGCCTGACCCCATCTTGGACAACTATGTGCTGCTGGTGGTGGTGATGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000105369.8
ENSMUST00000132523.8
ENSMUST00000147778.9
ENSMUST00000169546.9
ENSMUST00000170219.9
CDS GCA 72 bp TGCAGAGCAGAAGAACGCCAGACAGCACCACCAGCGTaGCTCCAACGAACAGCGACATCACCACCACCAGCA +
Preference number: 6 (lower is better)
Translates to: CRAEERQTAPPA*LQRTATSPPPA
Trigger: TGCTGGTGGTGGTGATGTCGCTGTTCGTTGGAGGCACGCTGGTGGTGCTGTCTGGCGTTCTTCTGCTCTGCA
60% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000105369.8
ENSMUST00000132523.8
ENSMUST00000147778.9
ENSMUST00000169546.9
ENSMUST00000170219.9
CDS GCA 72 bp TTCTCTGCTTCCTCCATGGCCCTGTTGAAGCGCTGGTaGACCTCCCAGCAGCGTTTGCAGAGCAGAAGAACG +
Preference number: 6 (lower is better)
Translates to: FSASSMALLKRW*TSQQRLQSRRT
Trigger: CGTTCTTCTGCTCTGCAAACGCTGCTGGGAGGTGCACCAGCGCTTCAACAGGGCCATGGAGGAAGCAGAGAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000105369.8
ENSMUST00000132523.8
ENSMUST00000147778.9
ENSMUST00000169546.9
ENSMUST00000170219.9
CDS GCA 72 bp GGTGCCGTTGTCCAGATAAGTAGTGGTGGTCTTCTCTaGTTCCTCCATGGCCCTGTTGAAGCGCTGGTGCAC +
Preference number: 6 (lower is better)
Translates to: GAVVQISSGGLL*FLHGPVEALVH
Trigger: GTGCACCAGCGCTTCAACAGGGCCATGGAGGAAGCAGAGAAGACCACCACTACTTATCTGGACAACGGCACC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000105369.8
ENSMUST00000132523.8
ENSMUST00000147778.9
ENSMUST00000169546.9
ENSMUST00000170219.9