Pregenerated sensors for CAVIN2 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000045954Ensembl transcript IDs: ENSMUST00000051572.8
Found 113 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | AAGAGGTTACACCATCAACACCCATTATTCACCTCACTCCTTCTCTaGAAGTCAGAGTGCAGCCCAGGACTGCTGCCTAGTCACCACTGT | + |
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Preference number: 1 (lower is better) Translates to: KRLHHQHPLFTSLLL*KSECSPGLLPSHHC Trigger: ACAGTGGTGACTAGGCAGCAGTCCTGGGCTGCACTCTGACTTTCAGAGAAGGAGTGAGGTGAATAATGGGTGTTGATGGTGTAACCTCTT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000051572.8 |
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| 3UTR-3UTR GCA 90 bp | CCTCACTCCTTCTCTGAAAGTCAGAGTGCAGCCCAGGACTGCTGCCTAGTCACCGTAGAGATGAAGAGGTaGGGGGTGGCTTCCACGAGG | + |
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Preference number: 2 (lower is better) Translates to: PHSFSESQSAAQDCCLVTVEMKR*GVASTR Trigger: CCTCGTGGAAGCCACCCCGCACCTCTTCATCTCTAC...GGTGACTAGGCAGCAGTCCTGGGCTGCACTCTGACTTTCAGAGAAGGAGTGAGG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000051572.8 |
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| 3UTR-3UTR GCA 90 bp | GTTCGAGCCCTGGGTCTCTCATCTTCAGACTACAATATAACAAAGCATTGGCATCTTCCACGAGGTGGATaGACTGGCCCAGTGTTCTGG | + |
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Preference number: 2 (lower is better) Translates to: VRALGLSSSDYNITKHWHLPRGG*TGPVFW Trigger: CCAGAACACTGGGCCAGTGCATCCACCTCGTGGAAG...ATGCCAATGCTTTGTTATATTGTAGTCTGAAGATGAGAGACCCAGGGCTCGAAC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000051572.8 |
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| 3UTR-3UTR TCA 90 bp | ACACAGGCATGGTTAGTTCAGCAATTCAGTATTTGGGGTTACATTAATTGCAGTACCTCACTCCTTCTCTaGAAGTCAGAGTGCAGCCCA | + |
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Preference number: 2 (lower is better) Translates to: TQAWLVQQFSIWGYINCSTSLLL*KSECSP Trigger: TGGGCTGCACTCTGACTTTCAGAGAAGGAGTGAGGT...ACTGCAATTAATGTAACCCCAAATACTGAATTGCTGAACTAACCATGCCTGTGT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000051572.8 |
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| 3UTR-3UTR TCA 90 bp | TTAGCTTACCATCAGCACCGTCTTTCAGCCCCCTTACAACAAACAATGGTTTCTATCCTCCAGTTTTTCTaGCTAAGCCAAAGAGATAGT | + |
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Preference number: 2 (lower is better) Translates to: LAYHQHRLSAPLQQTMVSILQFF*LSQRDS Trigger: ACTATCTCTTTGGCTTAGTCAGAAAAACTGGAGGAT...AGAAACCATTGTTTGTTGTAAGGGGGCTGAAAGACGGTGCTGATGGTAAGCTAA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000051572.8 |
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| 3UTR-3UTR GCA 90 bp | TTGCAGTACAGGAACACAGCTGAAGAGGTTACACCATCAACACCCATTATTCACAATTCACTACATTACTaGTACACTATTCAGCAAGCT | + |
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Preference number: 2 (lower is better) Translates to: LQYRNTAEEVTPSTPIIHNSLHY*YTIQQA Trigger: AGCTTGCTGAATAGTGTAGCAGTAATGTAGTGAATT...GTGAATAATGGGTGTTGATGGTGTAACCTCTTCAGCTGTGTTCCTGTACTGCAA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000051572.8 |
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| 3UTR-3UTR CCA 90 bp | ACACAGGCATGGTTAGTTCAGCAATTCAGTATTTGGGGTTACATTAATTGCAGTAAGAGAATAACCAGCTaGTCCTTCAGCTTTATCTTT | + |
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Preference number: 2 (lower is better) Translates to: TQAWLVQQFSIWGYINCSKRITS*SFSFIF Trigger: AAAGATAAAGCTGAAGGACCAGCTGGTTATTCTCTT...ACTGCAATTAATGTAACCCCAAATACTGAATTGCTGAACTAACCATGCCTGTGT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000051572.8 |
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| 3UTR TCA 72 bp | CACCATCAACACCCATTATTCACCTCACTCCTTCTCTaGAAGTCAGAGTGCAGCCCAGGACTGCTGCCTAGT | + |
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Preference number: 3 (lower is better) Translates to: HHQHPLFTSLLL*KSECSPGLLPS Trigger: ACTAGGCAGCAGTCCTGGGCTGCACTCTGACTTTCAGAGAAGGAGTGAGGTGAATAATGGGTGTTGATGGTG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000051572.8 |
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| 3UTR-3UTR CAA 90 bp | GTTCGAGCCCTGGGTCTCTCATCTTCAGACTACAATATAACAAAGCATTGGCATGTTTCTGTGATCCCATaGAGGCTACTGTACGGTCAG | + |
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Preference number: 3 (lower is better) Translates to: VRALGLSSSDYNITKHWHVSVIP*RLLYGQ Trigger: CTGACCGTACAGTAGCCTCAATGGGATCACAGAAAC...ATGCCAATGCTTTGTTATATTGTAGTCTGAAGATGAGAGACCCAGGGCTCGAAC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000051572.8 |
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| 3UTR CCA 72 bp | TTCACACAGGCATGGTTAGTTCAGCAATTCAGTATTTaGGGTTACATTAATTGCAGTACAGGAACACAGCTG | + |
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Preference number: 3 (lower is better) Translates to: FTQAWLVQQFSI*GYINCSTGTQL Trigger: CAGCTGTGTTCCTGTACTGCAATTAATGTAACCCCAAATACTGAATTGCTGAACTAACCATGCCTGTGTGAA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000051572.8 |
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| 3UTR-3UTR CAA 90 bp | GTTCGAGCCCTGGGTCTCTCATCTTCAGACTACAATATAACAAAGCATTGGCATTATTTTTGGCATTCTTaGTTCTCCATTTCTCCCACT | + |
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Preference number: 3 (lower is better) Translates to: VRALGLSSSDYNITKHWHYFWHS*FSISPT Trigger: AGTGGGAGAAATGGAGAACAAAGAATGCCAAAAATA...ATGCCAATGCTTTGTTATATTGTAGTCTGAAGATGAGAGACCCAGGGCTCGAAC 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000051572.8 |
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| 3UTR GCA 72 bp | TTAGTTCAGCAATTCAGTATTTGGGGTTACATTAATTaGAGTACAGGAACACAGCTGAAGAGGTTACACCAT | + |
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Preference number: 3 (lower is better) Translates to: LVQQFSIWGYIN*STGTQLKRLHH Trigger: ATGGTGTAACCTCTTCAGCTGTGTTCCTGTACTGCAATTAATGTAACCCCAAATACTGAATTGCTGAACTAA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000051572.8 |
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| 3UTR GCA 72 bp | TCATTCACAGAATACAGTAAGAATTCACTACATTACTaGTACACTATTCAGCAAGCTGATAGAATGACCAAA | + |
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Preference number: 3 (lower is better) Translates to: SFTEYSKNSLHY*YTIQQADRMTK Trigger: TTTGGTCATTCTATCAGCTTGCTGAATAGTGTAGCAGTAATGTAGTGAATTCTTACTGTATTCTGTGAATGA 35% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000051572.8 |
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| CDS-3UTR CCA 90 bp | CCTCACTCCTTCTCTGAAAGTCAGAGTGCAGCCCAGGACTGCTGCCTAGTCACCTTGGTGAGGTCGTTCTaGATGCCCTTCACCGAGCCC | + |
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Preference number: 4 (lower is better) Translates to: PHSFSESQSAAQDCCLVTLVRSF*MPFTEP Trigger: GGGCTCGGTGAAGGGCATCCAGAACGACCTCACCAA...GGTGACTAGGCAGCAGTCCTGGGCTGCACTCTGACTTTCAGAGAAGGAGTGAGG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000051572.8 |
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| CDS-3UTR TCA 90 bp | CCTCACTCCTTCTCTGAAAGTCAGAGTGCAGCCCAGGACTGCTGCCTAGTCACCATTACTGCCCACGGCTaGGTTGTTCCCTCTCCTTGC | + |
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Preference number: 4 (lower is better) Translates to: PHSFSESQSAAQDCCLVTITAHG*VVPSPC Trigger: GCAAGGAGAGGGAACAACTCAGCCGTGGGCAGTAAT...GGTGACTAGGCAGCAGTCCTGGGCTGCACTCTGACTTTCAGAGAAGGAGTGAGG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000051572.8 |
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| CDS-3UTR GCA 90 bp | CCTCACTCCTTCTCTGAAAGTCAGAGTGCAGCCCAGGACTGCTGCCTAGTCACCGCTTGCTCACTGTGTTaGTGGTGGAGGCCTGGTACT | + |
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Preference number: 4 (lower is better) Translates to: PHSFSESQSAAQDCCLVTACSLC*WWRPGT Trigger: AGTACCAGGCCTCCACCAGCAACACAGTGAGCAAGC...GGTGACTAGGCAGCAGTCCTGGGCTGCACTCTGACTTTCAGAGAAGGAGTGAGG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000051572.8 |
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| CDS-3UTR CCA 90 bp | CCTCACTCCTTCTCTGAAAGTCAGAGTGCAGCCCAGGACTGCTGCCTAGTCACCTGCTCACTGTGTTGCTaGTGGAGGCCTGGTACTTGG | + |
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Preference number: 4 (lower is better) Translates to: PHSFSESQSAAQDCCLVTCSLCC*WRPGTW Trigger: CCAAGTACCAGGCCTCCACCAGCAACACAGTGAGCA...GGTGACTAGGCAGCAGTCCTGGGCTGCACTCTGACTTTCAGAGAAGGAGTGAGG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000051572.8 |
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| CDS-3UTR CCA 90 bp | CCTCACTCCTTCTCTGAAAGTCAGAGTGCAGCCCAGGACTGCTGCCTAGTCACCCGGAGGAGTTGGGCGTaGTTGTTCTCCAGTCTCTTC | + |
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Preference number: 4 (lower is better) Translates to: PHSFSESQSAAQDCCLVTRRSWA*LFSSLF Trigger: GAAGAGACTGGAGAACAACCACGCCCAACTCCTCCG...GGTGACTAGGCAGCAGTCCTGGGCTGCACTCTGACTTTCAGAGAAGGAGTGAGG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000051572.8 |
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| CDS-3UTR TCA 90 bp | CCTCACTCCTTCTCTGAAAGTCAGAGTGCAGCCCAGGACTGCTGCCTAGTCACCCCATCTCCTCGGAGTTaGGCATGTAGCCACTCTCAT | + |
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Preference number: 4 (lower is better) Translates to: PHSFSESQSAAQDCCLVTPSPRS*ACSHSH Trigger: ATGAGAGTGGCTACATGCTCAACTCCGAGGAGATGG...GGTGACTAGGCAGCAGTCCTGGGCTGCACTCTGACTTTCAGAGAAGGAGTGAGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000051572.8 |
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| CDS-3UTR GCA 90 bp | GTTCGAGCCCTGGGTCTCTCATCTTCAGACTACAATATAACAAAGCATTGGCATCGCACCTGCTGGGCCTaGTGCAGGGCTACCGGCTCC | + |
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Preference number: 4 (lower is better) Translates to: VRALGLSSSDYNITKHWHRTCWA*CRATGS Trigger: GGAGCCGGTAGCCCTGCAGCAGGCCCAGCAGGTGCG...ATGCCAATGCTTTGTTATATTGTAGTCTGAAGATGAGAGACCCAGGGCTCGAAC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000051572.8 |
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| CDS-3UTR CCA 90 bp | GTTCGAGCCCTGGGTCTCTCATCTTCAGACTACAATATAACAAAGCATTGGCATGGCTGGGGCTCGGTGTaGAGGAAGGCATTGGGCTGG | + |
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Preference number: 4 (lower is better) Translates to: VRALGLSSSDYNITKHWHGWGSV*RKALGW Trigger: CCAGCCCAATGCCTTCCTCCACACCGAGCCCCAGCC...ATGCCAATGCTTTGTTATATTGTAGTCTGAAGATGAGAGACCCAGGGCTCGAAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000051572.8 |
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| CDS-3UTR CCA 90 bp | GAAGAGGTTACACCATCAACACCCATTATTCACCTCACTCCTTCTCTGAAAGTCGGATGGCCTCCTCTGTaGACCCCAGGTTCAGGCTGG | + |
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Preference number: 4 (lower is better) Translates to: EEVTPSTPIIHLTPSLKVGWPPL*TPGSGW Trigger: CCAGCCTGAACCTGGGGTCCACAGAGGAGGCCATCC...GACTTTCAGAGAAGGAGTGAGGTGAATAATGGGTGTTGATGGTGTAACCTCTTC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000051572.8 |
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| CDS-3UTR TCA 90 bp | ACACAGGCATGGTTAGTTCAGCAATTCAGTATTTGGGGTTACATTAATTGCAGTCGGACAGCCCGCGTGTaGGCGCTGACCTTGCGAGAC | + |
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Preference number: 4 (lower is better) Translates to: TQAWLVQQFSIWGYINCSRTARV*ALTLRD Trigger: GTCTCGCAAGGTCAGCGCTCACACGCGGGCTGTCCG...ACTGCAATTAATGTAACCCCAAATACTGAATTGCTGAACTAACCATGCCTGTGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000051572.8 |
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| CDS-3UTR GCA 90 bp | GAAGAGGTTACACCATCAACACCCATTATTCACCTCACTCCTTCTCTGAAAGTCCTCCTCCTTGCCTTCTaGAGCGCTGGGAACTGGCTC | + |
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Preference number: 4 (lower is better) Translates to: EEVTPSTPIIHLTPSLKVLLLAF*SAGNWL Trigger: GAGCCAGTTCCCAGCGCTGCAGAAGGCAAGGAGGAG...GACTTTCAGAGAAGGAGTGAGGTGAATAATGGGTGTTGATGGTGTAACCTCTTC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000051572.8 |
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| CDS-3UTR CCA 90 bp | TTGCAGTACAGGAACACAGCTGAAGAGGTTACACCATCAACACCCATTATTCACTGGGCTGGGGCTGGATaGCTTCTCCTGGAGCATGTC | + |
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Preference number: 4 (lower is better) Translates to: LQYRNTAEEVTPSTPIIHWAGAG*LLLEHV Trigger: GACATGCTCCAGGAGAAGCCATCCAGCCCCAGCCCA...GTGAATAATGGGTGTTGATGGTGTAACCTCTTCAGCTGTGTTCCTGTACTGCAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000051572.8 |
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| CDS-3UTR CCA 90 bp | TTGCAGTACAGGAACACAGCTGAAGAGGTTACACCATCAACACCCATTATTCACGCATTGGGCTGGGGCTaGATGGCTTCTCCTGGAGCA | + |
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Preference number: 4 (lower is better) Translates to: LQYRNTAEEVTPSTPIIHALGWG*MASPGA Trigger: TGCTCCAGGAGAAGCCATCCAGCCCCAGCCCAATGC...GTGAATAATGGGTGTTGATGGTGTAACCTCTTCAGCTGTGTTCCTGTACTGCAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000051572.8 |
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| CDS-3UTR TCA 90 bp | GAAGAGGTTACACCATCAACACCCATTATTCACCTCACTCCTTCTCTGAAAGTCGGAGTGTGTGCACGGTaGCAGCATTCACCTGCGAGT | + |
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Preference number: 4 (lower is better) Translates to: EEVTPSTPIIHLTPSLKVGVCAR*QHSPAS Trigger: ACTCGCAGGTGAATGCTGTCACCGTGCACACACTCC...GACTTTCAGAGAAGGAGTGAGGTGAATAATGGGTGTTGATGGTGTAACCTCTTC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000051572.8 |
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| CDS-3UTR GCA 90 bp | GTTACACCATCAACACCCATTATTCACCTCACTCCTTCTCTGAAAGTCAGAGTGCAGCAAGCTCCTCCTTaGCTTCTGCAGCGCTGGGAA | + |
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Preference number: 4 (lower is better) Translates to: VTPSTPIIHLTPSLKVRVQQAPP*LLQRWE Trigger: TTCCCAGCGCTGCAGAAGGCAAGGAGGAGCTTGCTG...CACTCTGACTTTCAGAGAAGGAGTGAGGTGAATAATGGGTGTTGATGGTGTAAC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000051572.8 |
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| CDS-3UTR GCA 90 bp | ACACAGGCATGGTTAGTTCAGCAATTCAGTATTTGGGGTTACATTAATTGCAGTACCTGCTGGGCCTGCTaGAGGGCTACCGGCTCCTCT | + |
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Preference number: 4 (lower is better) Translates to: TQAWLVQQFSIWGYINCSTCWAC*RATGSS Trigger: AGAGGAGCCGGTAGCCCTGCAGCAGGCCCAGCAGGT...ACTGCAATTAATGTAACCCCAAATACTGAATTGCTGAACTAACCATGCCTGTGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000051572.8 |
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| CDS-3UTR TCA 90 bp | GTTACACCATCAACACCCATTATTCACCTCACTCCTTCTCTGAAAGTCAGAGTGACTTGGAGAGCTTGGTaGGGTCGTTCTGGATGCCCT | + |
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Preference number: 4 (lower is better) Translates to: VTPSTPIIHLTPSLKVRVTWRAW*GRSGCP Trigger: AGGGCATCCAGAACGACCTCACCAAGCTCTCCAAGT...CACTCTGACTTTCAGAGAAGGAGTGAGGTGAATAATGGGTGTTGATGGTGTAAC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000051572.8 |
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| CDS-3UTR GCA 90 bp | TTAGCTTACCATCAGCACCGTCTTTCAGCCCCCTTACAACAAACAATGGTTTCTGCCACTGGGGAGGGATaGTTCAGAAAGACCCTCTGT | + |
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Preference number: 4 (lower is better) Translates to: LAYHQHRLSAPLQQTMVSATGEG*FRKTLC Trigger: ACAGAGGGTCTTTCTGAAGCATCCCTCCCCAGTGGC...AGAAACCATTGTTTGTTGTAAGGGGGCTGAAAGACGGTGCTGATGGTAAGCTAA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000051572.8 |
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| CDS-3UTR CCA 90 bp | GAAGAGGTTACACCATCAACACCCATTATTCACCTCACTCCTTCTCTGAAAGTCTTGCTGGTGGAGGCCTaGTACTTGGAGAGCTTGGTG | + |
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Preference number: 4 (lower is better) Translates to: EEVTPSTPIIHLTPSLKVLLVEA*YLESLV Trigger: CACCAAGCTCTCCAAGTACCAGGCCTCCACCAGCAA...GACTTTCAGAGAAGGAGTGAGGTGAATAATGGGTGTTGATGGTGTAACCTCTTC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000051572.8 |
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| CDS-3UTR CCA 90 bp | GTTACACCATCAACACCCATTATTCACCTCACTCCTTCTCTGAAAGTCAGAGTGTTGCGTCGGAGGAGTTaGGCGTGGTTGTTCTCCAGT | + |
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Preference number: 4 (lower is better) Translates to: VTPSTPIIHLTPSLKVRVLRRRS*AWLFSS Trigger: ACTGGAGAACAACCACGCCCAACTCCTCCGACGCAA...CACTCTGACTTTCAGAGAAGGAGTGAGGTGAATAATGGGTGTTGATGGTGTAAC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000051572.8 |
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| CDS-3UTR CCA 90 bp | GTTACACCATCAACACCCATTATTCACCTCACTCCTTCTCTGAAAGTCAGAGTGCCTCCATCAGGCCACTaGGGAGGGATGCTTCAGAAA | + |
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Preference number: 4 (lower is better) Translates to: VTPSTPIIHLTPSLKVRVPPSGH*GGMLQK Trigger: TTTCTGAAGCATCCCTCCCCAGTGGCCTGATGGAGG...CACTCTGACTTTCAGAGAAGGAGTGAGGTGAATAATGGGTGTTGATGGTGTAAC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000051572.8 |
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| CDS-3UTR CCA 90 bp | GTTCGAGCCCTGGGTCTCTCATCTTCAGACTACAATATAACAAAGCATTGGCATGGACCTGTTTCTCACTaGGTTCCTCCATCTCCTCGG | + |
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Preference number: 4 (lower is better) Translates to: VRALGLSSSDYNITKHWHGPVSH*VPPSPR Trigger: CCGAGGAGATGGAGGAACCCAGTGAGAAACAGGTCC...ATGCCAATGCTTTGTTATATTGTAGTCTGAAGATGAGAGACCCAGGGCTCGAAC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000051572.8 |
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| CDS-3UTR GCA 90 bp | GTTACACCATCAACACCCATTATTCACCTCACTCCTTCTCTGAAAGTCAGAGTGATGCTGGAACTTTTCTaGCTGTGCAGCGTCCTCTCC | + |
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Preference number: 4 (lower is better) Translates to: VTPSTPIIHLTPSLKVRVMLELF*LCSVLS Trigger: GGAGAGGACGCTGCACAGGCAGAAAAGTTCCAGCAT...CACTCTGACTTTCAGAGAAGGAGTGAGGTGAATAATGGGTGTTGATGGTGTAAC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000051572.8 |
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| CDS-3UTR CCA 90 bp | TTGCAGTACAGGAACACAGCTGAAGAGGTTACACCATCAACACCCATTATTCACTCACTGTGTTGCTGGTaGAGGCCTGGTACTTGGAGA | + |
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Preference number: 4 (lower is better) Translates to: LQYRNTAEEVTPSTPIIHSLCCW*RPGTWR Trigger: TCTCCAAGTACCAGGCCTCCACCAGCAACACAGTGA...GTGAATAATGGGTGTTGATGGTGTAACCTCTTCAGCTGTGTTCCTGTACTGCAA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000051572.8 |
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| CDS-3UTR CCA 90 bp | TTAGCTTACCATCAGCACCGTCTTTCAGCCCCCTTACAACAAACAATGGTTTCTTGCAGCGCTGGGAACTaGCTCCTTCACAAACACACT | + |
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Preference number: 4 (lower is better) Translates to: LAYHQHRLSAPLQQTMVSCSAGN*LLHKHT Trigger: AGTGTGTTTGTGAAGGAGCCAGTTCCCAGCGCTGCA...AGAAACCATTGTTTGTTGTAAGGGGGCTGAAAGACGGTGCTGATGGTAAGCTAA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000051572.8 |
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| CDS-3UTR CCA 90 bp | GTTCGAGCCCTGGGTCTCTCATCTTCAGACTACAATATAACAAAGCATTGGCATCGGTCCTCCTGCATCTaGTCTTCCAACTTGGTCTCA | + |
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Preference number: 4 (lower is better) Translates to: VRALGLSSSDYNITKHWHRSSCI*SSNLVS Trigger: TGAGACCAAGTTGGAAGACCAGATGCAGGAGGACCG...ATGCCAATGCTTTGTTATATTGTAGTCTGAAGATGAGAGACCCAGGGCTCGAAC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000051572.8 |
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| CDS-3UTR TCA 90 bp | TTAGCTTACCATCAGCACCGTCTTTCAGCCCCCTTACAACAAACAATGGTTTCTGTTCCCTCTCCTTGCTaGTTTCTCAGCATCTTCTGC | + |
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Preference number: 4 (lower is better) Translates to: LAYHQHRLSAPLQQTMVSVPSPC*FLSIFC Trigger: GCAGAAGATGCTGAGAAATCAGCAAGGAGAGGGAAC...AGAAACCATTGTTTGTTGTAAGGGGGCTGAAAGACGGTGCTGATGGTAAGCTAA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000051572.8 |
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| CDS-3UTR CCA 90 bp | GTTACACCATCAACACCCATTATTCACCTCACTCCTTCTCTGAAAGTCAGAGTGATGAGCACTTTGAAGTaGTTGCGTCGGAGGAGTTGG | + |
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Preference number: 4 (lower is better) Translates to: VTPSTPIIHLTPSLKVRVMSTLK*LRRRSW Trigger: CCAACTCCTCCGACGCAACCACTTCAAAGTGCTCAT...CACTCTGACTTTCAGAGAAGGAGTGAGGTGAATAATGGGTGTTGATGGTGTAAC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000051572.8 |
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| CDS-3UTR GCA 90 bp | GTTCGAGCCCTGGGTCTCTCATCTTCAGACTACAATATAACAAAGCATTGGCATGCTTTTCCCAGAAGATaGTTTCTGGTGGTTGGGTGT | + |
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Preference number: 4 (lower is better) Translates to: VRALGLSSSDYNITKHWHAFPRR*FLVVGC Trigger: ACACCCAACCACCAGAAAGCATCTTCTGGGAAAAGC...ATGCCAATGCTTTGTTATATTGTAGTCTGAAGATGAGAGACCCAGGGCTCGAAC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000051572.8 |
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| CDS-3UTR CCA 90 bp | ACACAGGCATGGTTAGTTCAGCAATTCAGTATTTGGGGTTACATTAATTGCAGTTGCCTTCTGCAGCGCTaGGAACTGGCTCCTTCACAA | + |
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Preference number: 4 (lower is better) Translates to: TQAWLVQQFSIWGYINCSCLLQR*ELAPSQ Trigger: TTGTGAAGGAGCCAGTTCCCAGCGCTGCAGAAGGCA...ACTGCAATTAATGTAACCCCAAATACTGAATTGCTGAACTAACCATGCCTGTGT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000051572.8 |
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| CDS-3UTR TCA 90 bp | ACACAGGCATGGTTAGTTCAGCAATTCAGTATTTGGGGTTACATTAATTGCAGTCGGCGTCCAGCATGTTaGCCAATTTATCCAGGAGTG | + |
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Preference number: 4 (lower is better) Translates to: TQAWLVQQFSIWGYINCSRRPAC*PIYPGV Trigger: CACTCCTGGATAAATTGGTCAACATGCTGGACGCCG...ACTGCAATTAATGTAACCCCAAATACTGAATTGCTGAACTAACCATGCCTGTGT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000051572.8 |
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| CDS-3UTR GCA 90 bp | GTTACACCATCAACACCCATTATTCACCTCACTCCTTCTCTGAAAGTCAGAGTGTTCCATCTTCTCTTCTaGACTATCTTCCAGGGCTTC | + |
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Preference number: 4 (lower is better) Translates to: VTPSTPIIHLTPSLKVRVFHLLF*TIFQGF Trigger: GAAGCCCTGGAAGATAGTGCAGAAGAGAAGATGGAA...CACTCTGACTTTCAGAGAAGGAGTGAGGTGAATAATGGGTGTTGATGGTGTAAC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000051572.8 |
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| CDS-3UTR CCA 90 bp | TTAGCTTACCATCAGCACCGTCTTTCAGCCCCCTTACAACAAACAATGGTTTCTTCTGTGTTTGGATGCTaGAACTTTTCTGCCTGTGCA | + |
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Preference number: 4 (lower is better) Translates to: LAYHQHRLSAPLQQTMVSSVFGC*NFSACA Trigger: TGCACAGGCAGAAAAGTTCCAGCATCCAAACACAGA...AGAAACCATTGTTTGTTGTAAGGGGGCTGAAAGACGGTGCTGATGGTAAGCTAA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000051572.8 |
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| CDS-3UTR GCA 90 bp | ACACAGGCATGGTTAGTTCAGCAATTCAGTATTTGGGGTTACATTAATTGCAGTACTTCTCTAGCAGCTTaGTCACTGTGTTGCTGGTGG | + |
|
Preference number: 4 (lower is better) Translates to: TQAWLVQQFSIWGYINCSTSLAA*SLCCWW Trigger: CCACCAGCAACACAGTGAGCAAGCTGCTAGAGAAGT...ACTGCAATTAATGTAACCCCAAATACTGAATTGCTGAACTAACCATGCCTGTGT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000051572.8 |
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| CDS-3UTR CCA 90 bp | TTAGCTTACCATCAGCACCGTCTTTCAGCCCCCTTACAACAAACAATGGTTTCTTCTGGTCTTCCAACTTaGTCTCATTTTCTACAGAGC | + |
|
Preference number: 4 (lower is better) Translates to: LAYHQHRLSAPLQQTMVSSGLPT*SHFLQS Trigger: GCTCTGTAGAAAATGAGACCAAGTTGGAAGACCAGA...AGAAACCATTGTTTGTTGTAAGGGGGCTGAAAGACGGTGCTGATGGTAAGCTAA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000051572.8 |
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| CDS-3UTR TCA 90 bp | GTTCGAGCCCTGGGTCTCTCATCTTCAGACTACAATATAACAAAGCATTGGCATGGCTATCGACTTTCTTaGGGCTGGATCTTTTTATTT | + |
|
Preference number: 4 (lower is better) Translates to: VRALGLSSSDYNITKHWHGYRLS*GWIFLF Trigger: AAATAAAAAGATCCAGCCTCAAGAAAGTCGATAGCC...ATGCCAATGCTTTGTTATATTGTAGTCTGAAGATGAGAGACCCAGGGCTCGAAC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000051572.8 |
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| CDS-3UTR TCA 90 bp | TTGCAGTACAGGAACACAGCTGAAGAGGTTACACCATCAACACCCATTATTCACTTTTTCTCGATGTTCTaGCGAGAAAACGCTTTCTTG | + |
|
Preference number: 4 (lower is better) Translates to: LQYRNTAEEVTPSTPIIHFFSMF*RENAFL Trigger: CAAGAAAGCGTTTTCTCGTCAGAACATCGAGAAAAA...GTGAATAATGGGTGTTGATGGTGTAACCTCTTCAGCTGTGTTCCTGTACTGCAA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000051572.8 |
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| CDS-3UTR CCA 90 bp | TTGCAGTACAGGAACACAGCTGAAGAGGTTACACCATCAACACCCATTATTCACATCTCACTTTCTTCCTaGAAGATGAGCACTTTGAAG | + |
|
Preference number: 4 (lower is better) Translates to: LQYRNTAEEVTPSTPIIHISLSS*KMSTLK Trigger: CTTCAAAGTGCTCATCTTCCAGGAAGAAAGTGAGAT...GTGAATAATGGGTGTTGATGGTGTAACCTCTTCAGCTGTGTTCCTGTACTGCAA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000051572.8 |
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| CDS-3UTR GCA 90 bp | ACACAGGCATGGTTAGTTCAGCAATTCAGTATTTGGGGTTACATTAATTGCAGTATGTCTGTGTTTGGATaGTGGAACTTTTCTGCCTGT | + |
|
Preference number: 4 (lower is better) Translates to: TQAWLVQQFSIWGYINCSMSVFG*WNFSAC Trigger: ACAGGCAGAAAAGTTCCAGCATCCAAACACAGACAT...ACTGCAATTAATGTAACCCCAAATACTGAATTGCTGAACTAACCATGCCTGTGT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000051572.8 |
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| CDS-3UTR CCA 90 bp | ACACAGGCATGGTTAGTTCAGCAATTCAGTATTTGGGGTTACATTAATTGCAGTCAACAGATACGATCTTaGTTCCCAGCTTGTTCATCT | + |
|
Preference number: 4 (lower is better) Translates to: TQAWLVQQFSIWGYINCSQQIRS*FPACSS Trigger: AGATGAACAAGCTGGGAACCAAGATCGTATCTGTTG...ACTGCAATTAATGTAACCCCAAATACTGAATTGCTGAACTAACCATGCCTGTGT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000051572.8 |
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| CDS CCA 90 bp | ACCCCAGGTTCAGGCTGGGGCTCGGTGTGGAGGAAGGCATTGGGCTaGGGCTGGATGGCTTCTCCTGGAGCATGTCTGTGTTTGGATGCT | + |
|
Preference number: 5 (lower is better) Translates to: TPGSGWGSVWRKALG*GWMASPGACLCLDA Trigger: AGCATCCAAACACAGACATGCTCCAGGAGAAGCCATCCAGCCCCAGCCCAATGCCTTCCTCCACACCGAGCCCCAGCCTGAACCTGGGGT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000051572.8 |
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| CDS TCA 90 bp | GTGAGGTCGTTCTGGATGCCCTTCACCGAGCCCTCCAGGTTGATCTaGCGCTGTTCCATGTTGTGCTGGTTCTCCCTCACGGCGTCCAGC | + |
|
Preference number: 5 (lower is better) Translates to: VRSFWMPFTEPSRLI*RCSMLCWFSLTASS Trigger: GCTGGACGCCGTGAGGGAGAACCAGCACAACATGGAACAGCGTCAGATCAACCTGGAGGGCTCGGTGAAGGGCATCCAGAACGACCTCAC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000051572.8 |
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| CDS CCA 90 bp | GGTTCAGGCTGGGGCTCGGTGTGGAGGAAGGCATTGGGCTGGGGCTaGATGGCTTCTCCTGGAGCATGTCTGTGTTTGGATGCTGGAACT | + |
|
Preference number: 5 (lower is better) Translates to: GSGWGSVWRKALGWG*MASPGACLCLDAGT Trigger: AGTTCCAGCATCCAAACACAGACATGCTCCAGGAGAAGCCATCCAGCCCCAGCCCAATGCCTTCCTCCACACCGAGCCCCAGCCTGAACC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000051572.8 |
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| CDS TCA 90 bp | CTGGCTGGACCTGTTTCTCACTGGGTTCCTCCATCTCCTCGGAGTTaGGCATGTAGCCACTCTCATAGCGCACCTGCTGGGCCTGCTGCA | + |
|
Preference number: 5 (lower is better) Translates to: LAGPVSHWVPPSPRS*ACSHSHSAPAGPAA Trigger: TGCAGCAGGCCCAGCAGGTGCGCTATGAGAGTGGCTACATGCTCAACTCCGAGGAGATGGAGGAACCCAGTGAGAAACAGGTCCAGCCAG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000051572.8 |
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| CDS CCA 90 bp | GGGCCTGCTGCAGGGCTACCGGCTCCTCTTCTTCATCTTCCTCAATaGTCAGATCCGCATTACTGCCCACGGCTGAGTTGTTCCCTCTCC | + |
|
Preference number: 5 (lower is better) Translates to: GPAAGLPAPLLHLPQ*SDPHYCPRLSCSLS Trigger: GGAGAGGGAACAACTCAGCCGTGGGCAGTAATGCGGATCTGACCATTGAGGAAGATGAAGAAGAGGAGCCGGTAGCCCTGCAGCAGGCCC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000051572.8 |
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| CDS-3UTR CAA 90 bp | CCTCACTCCTTCTCTGAAAGTCAGAGTGCAGCCCAGGACTGCTGCCTAGTCACCGTGGAGGCCTGGTACTaGGAGAGCTTGGTGAGGTCG | + |
|
Preference number: 5 (lower is better) Translates to: PHSFSESQSAAQDCCLVTVEAWY*ESLVRS Trigger: CGACCTCACCAAGCTCTCCAAGTACCAGGCCTCCAC...GGTGACTAGGCAGCAGTCCTGGGCTGCACTCTGACTTTCAGAGAAGGAGTGAGG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000051572.8 |
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| CDS GCA 90 bp | TCCCTCACGGCGTCCAGCATGTTGACCAATTTATCCAGGAGTGTGTaGACGGTGACAGCATTCACCTGCGAGTTGTCTCGGATGGCCTCC | + |
|
Preference number: 5 (lower is better) Translates to: SLTASSMLTNLSRSV*TVTAFTCELSRMAS Trigger: GGAGGCCATCCGAGACAACTCGCAGGTGAATGCTGTCACCGTGCACACACTCCTGGATAAATTGGTCAACATGCTGGACGCCGTGAGGGA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000051572.8 |
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| CDS CCA 90 bp | CTCGGTGTGGAGGAAGGCATTGGGCTGGGGCTGGATGGCTTCTCCTaGAGCATGTCTGTGTTTGGATGCTGGAACTTTTCTGCCTGTGCA | + |
|
Preference number: 5 (lower is better) Translates to: LGVEEGIGLGLDGFS*SMSVFGCWNFSACA Trigger: TGCACAGGCAGAAAAGTTCCAGCATCCAAACACAGACATGCTCCAGGAGAAGCCATCCAGCCCCAGCCCAATGCCTTCCTCCACACCGAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000051572.8 |
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| CDS GCA 90 bp | TTGACCAATTTATCCAGGAGTGTGTGCACGGTGACAGCATTCACCTaGGAGTTGTCTCGGATGGCCTCCTCTGTGGACCCCAGGTTCAGG | + |
|
Preference number: 5 (lower is better) Translates to: LTNLSRSVCTVTAFT*ELSRMASSVDPRFR Trigger: CCTGAACCTGGGGTCCACAGAGGAGGCCATCCGAGACAACTCGCAGGTGAATGCTGTCACCGTGCACACACTCCTGGATAAATTGGTCAA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000051572.8 |
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| CDS GCA 90 bp | TTCCTCCAGGGACTTGTTCTCATCAGCAAGCTCCTCCTTGCCTTCTaGAGCGCTGGGAACTGGCTCCTTCACAAACACACTGGCAGGGAT | + |
|
Preference number: 5 (lower is better) Translates to: FLQGLVLISKLLLAF*SAGNWLLHKHTGRD Trigger: ATCCCTGCCAGTGTGTTTGTGAAGGAGCCAGTTCCCAGCGCTGCAGAAGGCAAGGAGGAGCTTGCTGATGAGAACAAGTCCCTGGAGGAA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000051572.8 |
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| CDS GCA 90 bp | CTGAGTTGTTCCCTCTCCTTGCTGATTTCTCAGCATCTTCTGCGCTaGCCTCCATCAGGCCACTGGGGAGGGATGCTTCAGAAAGACCCT | + |
|
Preference number: 5 (lower is better) Translates to: LSCSLSLLISQHLLR*PPSGHWGGMLQKDP Trigger: AGGGTCTTTCTGAAGCATCCCTCCCCAGTGGCCTGATGGAGGGCAGCGCAGAAGATGCTGAGAAATCAGCAAGGAGAGGGAACAACTCAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000051572.8 |
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| CDS CCA 90 bp | TGGAAGATGAGCACTTTGAAGTGGTTGCGTCGGAGGAGTTGGGCGTaGTTGTTCTCCAGTCTCTTCACCTGGACACACTGCCTCTCGAGG | + |
|
Preference number: 5 (lower is better) Translates to: WKMSTLKWLRRRSWA*LFSSLFTWTHCLSR Trigger: CCTCGAGAGGCAGTGTGTCCAGGTGAAGAGACTGGAGAACAACCACGCCCAACTCCTCCGACGCAACCACTTCAAAGTGCTCATCTTCCA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000051572.8 |
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| CDS-3UTR CAA 90 bp | CCTCACTCCTTCTCTGAAAGTCAGAGTGCAGCCCAGGACTGCTGCCTAGTCACCTGGAAGATGAGCACTTaGAAGTGGTTGCGTCGGAGG | + |
|
Preference number: 5 (lower is better) Translates to: PHSFSESQSAAQDCCLVTWKMST*KWLRRR Trigger: CCTCCGACGCAACCACTTCAAAGTGCTCATCTTCCA...GGTGACTAGGCAGCAGTCCTGGGCTGCACTCTGACTTTCAGAGAAGGAGTGAGG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000051572.8 |
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| CDS GCA 90 bp | TCCTCATCACGGGGCAATTCGTCATCAGAGGAGAGGTCCACGTTGTaGAGAGTTTCCTCCAGGGACTTGTTCTCATCAGCAAGCTCCTCC | + |
|
Preference number: 5 (lower is better) Translates to: SSSRGNSSSEERSTL*RVSSRDLFSSASSS Trigger: GGAGGAGCTTGCTGATGAGAACAAGTCCCTGGAGGAAACTCTGCACAACGTGGACCTCTCCTCTGATGACGAATTGCCCCGTGATGAGGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000051572.8 |
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| CDS CCA 90 bp | TCTTCCTGGAAGATGAGCACTTTGAAGTGGTTGCGTCGGAGGAGTTaGGCGTGGTTGTTCTCCAGTCTCTTCACCTGGACACACTGCCTC | + |
|
Preference number: 5 (lower is better) Translates to: SSWKMSTLKWLRRRS*AWLFSSLFTWTHCL Trigger: GAGGCAGTGTGTCCAGGTGAAGAGACTGGAGAACAACCACGCCCAACTCCTCCGACGCAACCACTTCAAAGTGCTCATCTTCCAGGAAGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000051572.8 |
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| CDS GCA 90 bp | CCGGCTCCTCTTCTTCATCTTCCTCAATGGTCAGATCCGCATTACTaGCCACGGCTGAGTTGTTCCCTCTCCTTGCTGATTTCTCAGCAT | + |
|
Preference number: 5 (lower is better) Translates to: PAPLLHLPQWSDPHY*PRLSCSLSLLISQH Trigger: ATGCTGAGAAATCAGCAAGGAGAGGGAACAACTCAGCCGTGGGCAGTAATGCGGATCTGACCATTGAGGAAGATGAAGAAGAGGAGCCGG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000051572.8 |
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| CDS CCA 90 bp | GAAAGACCCTCTGTGAACGAACCCTCCTCGCGGTCCTCCTGCATCTaGTCTTCCAACTTGGTCTCATTTTCTACAGAGCTTTCTCCCTCT | + |
|
Preference number: 5 (lower is better) Translates to: ERPSVNEPSSRSSCI*SSNLVSFSTELSPS Trigger: AGAGGGAGAAAGCTCTGTAGAAAATGAGACCAAGTTGGAAGACCAGATGCAGGAGGACCGCGAGGAGGGTTCGTTCACAGAGGGTCTTTC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000051572.8 |
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| CDS-3UTR CAA 90 bp | CCTCACTCCTTCTCTGAAAGTCAGAGTGCAGCCCAGGACTGCTGCCTAGTCACCTCAACAGATACGATCTaGGTTCCCAGCTTGTTCATC | + |
|
Preference number: 5 (lower is better) Translates to: PHSFSESQSAAQDCCLVTSTDTI*VPSLFI Trigger: GATGAACAAGCTGGGAACCAAGATCGTATCTGTTGA...GGTGACTAGGCAGCAGTCCTGGGCTGCACTCTGACTTTCAGAGAAGGAGTGAGG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000051572.8 |
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| CDS GCA 90 bp | GCTTCAGAAAGACCCTCTGTGAACGAACCCTCCTCGCGGTCCTCCTaGATCTGGTCTTCCAACTTGGTCTCATTTTCTACAGAGCTTTCT | + |
|
Preference number: 5 (lower is better) Translates to: ASERPSVNEPSSRSS*IWSSNLVSFSTELS Trigger: AGAAAGCTCTGTAGAAAATGAGACCAAGTTGGAAGACCAGATGCAGGAGGACCGCGAGGAGGGTTCGTTCACAGAGGGTCTTTCTGAAGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000051572.8 |
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| CDS-3UTR CAA 90 bp | GAAGAGGTTACACCATCAACACCCATTATTCACCTCACTCCTTCTCTGAAAGTCGTTGCGTCGGAGGAGTaGGGCGTGGTTGTTCTCCAG | + |
|
Preference number: 5 (lower is better) Translates to: EEVTPSTPIIHLTPSLKVVASEE*GVVVLQ Trigger: CTGGAGAACAACCACGCCCAACTCCTCCGACGCAAC...GACTTTCAGAGAAGGAGTGAGGTGAATAATGGGTGTTGATGGTGTAACCTCTTC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000051572.8 |
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| CDS-3UTR CAA 90 bp | GTTCGAGCCCTGGGTCTCTCATCTTCAGACTACAATATAACAAAGCATTGGCATGCATTCACCTGCGAGTaGTCTCGGATGGCCTCCTCT | + |
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Preference number: 5 (lower is better) Translates to: VRALGLSSSDYNITKHWHAFTCE*SRMASS Trigger: AGAGGAGGCCATCCGAGACAACTCGCAGGTGAATGC...ATGCCAATGCTTTGTTATATTGTAGTCTGAAGATGAGAGACCCAGGGCTCGAAC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000051572.8 |
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| CDS-3UTR CAA 90 bp | GTTACACCATCAACACCCATTATTCACCTCACTCCTTCTCTGAAAGTCAGAGTGAGCTTGCTCACTGTGTaGCTGGTGGAGGCCTGGTAC | + |
|
Preference number: 5 (lower is better) Translates to: VTPSTPIIHLTPSLKVRVSLLTV*LVEAWY Trigger: GTACCAGGCCTCCACCAGCAACACAGTGAGCAAGCT...CACTCTGACTTTCAGAGAAGGAGTGAGGTGAATAATGGGTGTTGATGGTGTAAC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000051572.8 |
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| CDS-3UTR CAA 90 bp | GTTCGAGCCCTGGGTCTCTCATCTTCAGACTACAATATAACAAAGCATTGGCATAGCACTTTGAAGTGGTaGCGTCGGAGGAGTTGGGCG | + |
|
Preference number: 5 (lower is better) Translates to: VRALGLSSSDYNITKHWHSTLKW*RRRSWA Trigger: CGCCCAACTCCTCCGACGCAACCACTTCAAAGTGCT...ATGCCAATGCTTTGTTATATTGTAGTCTGAAGATGAGAGACCCAGGGCTCGAAC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000051572.8 |
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| CDS-3UTR CAA 90 bp | GTTCGAGCCCTGGGTCTCTCATCTTCAGACTACAATATAACAAAGCATTGGCATGAGGAGAGGTCCACGTaGTGCAGAGTTTCCTCCAGG | + |
|
Preference number: 5 (lower is better) Translates to: VRALGLSSSDYNITKHWHEERST*CRVSSR Trigger: CCTGGAGGAAACTCTGCACAACGTGGACCTCTCCTC...ATGCCAATGCTTTGTTATATTGTAGTCTGAAGATGAGAGACCCAGGGCTCGAAC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000051572.8 |
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| CDS-3UTR CAA 90 bp | TTAGCTTACCATCAGCACCGTCTTTCAGCCCCCTTACAACAAACAATGGTTTCTCTGCCCACGGCTGAGTaGTTCCCTCTCCTTGCTGAT | + |
|
Preference number: 5 (lower is better) Translates to: LAYHQHRLSAPLQQTMVSLPTAE*FPLLAD Trigger: ATCAGCAAGGAGAGGGAACAACTCAGCCGTGGGCAG...AGAAACCATTGTTTGTTGTAAGGGGGCTGAAAGACGGTGCTGATGGTAAGCTAA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000051572.8 |
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| CDS-3UTR CAA 90 bp | TTGCAGTACAGGAACACAGCTGAAGAGGTTACACCATCAACACCCATTATTCACAGGAGTTGGGCGTGGTaGTTCTCCAGTCTCTTCACC | + |
|
Preference number: 5 (lower is better) Translates to: LQYRNTAEEVTPSTPIIHRSWAW*FSSLFT Trigger: GGTGAAGAGACTGGAGAACAACCACGCCCAACTCCT...GTGAATAATGGGTGTTGATGGTGTAACCTCTTCAGCTGTGTTCCTGTACTGCAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000051572.8 |
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| CDS-3UTR CAA 90 bp | GAAGAGGTTACACCATCAACACCCATTATTCACCTCACTCCTTCTCTGAAAGTCTGGTACTTGGAGAGCTaGGTGAGGTCGTTCTGGATG | + |
|
Preference number: 5 (lower is better) Translates to: EEVTPSTPIIHLTPSLKVWYLES*VRSFWM Trigger: CATCCAGAACGACCTCACCAAGCTCTCCAAGTACCA...GACTTTCAGAGAAGGAGTGAGGTGAATAATGGGTGTTGATGGTGTAACCTCTTC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000051572.8 |
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| CDS-3UTR CAA 90 bp | GAAGAGGTTACACCATCAACACCCATTATTCACCTCACTCCTTCTCTGAAAGTCGACTTCTCTAGCAGCTaGCTCACTGTGTTGCTGGTG | + |
|
Preference number: 5 (lower is better) Translates to: EEVTPSTPIIHLTPSLKVDFSSS*LTVLLV Trigger: CACCAGCAACACAGTGAGCAAGCTGCTAGAGAAGTC...GACTTTCAGAGAAGGAGTGAGGTGAATAATGGGTGTTGATGGTGTAACCTCTTC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000051572.8 |
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| CDS-3UTR CAA 90 bp | TTAGCTTACCATCAGCACCGTCTTTCAGCCCCCTTACAACAAACAATGGTTTCTGTTTCCTCCAGGGACTaGTTCTCATCAGCAAGCTCC | + |
|
Preference number: 5 (lower is better) Translates to: LAYHQHRLSAPLQQTMVSVSSRD*FSSASS Trigger: GGAGCTTGCTGATGAGAACAAGTCCCTGGAGGAAAC...AGAAACCATTGTTTGTTGTAAGGGGGCTGAAAGACGGTGCTGATGGTAAGCTAA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000051572.8 |
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| CDS-3UTR CAA 90 bp | GTTCGAGCCCTGGGTCTCTCATCTTCAGACTACAATATAACAAAGCATTGGCATACGGCGTCCAGCATGTaGACCAATTTATCCAGGAGT | + |
|
Preference number: 5 (lower is better) Translates to: VRALGLSSSDYNITKHWHTASSM*TNLSRS Trigger: ACTCCTGGATAAATTGGTCAACATGCTGGACGCCGT...ATGCCAATGCTTTGTTATATTGTAGTCTGAAGATGAGAGACCCAGGGCTCGAAC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000051572.8 |
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| CDS TCA 90 bp | GATACGATCTTGGTTCCCAGCTTGTTCATCTTTTTCTCGATGTTCTaGCGAGAAAACGCTTTCTTGAGGCTATCGACTTTCTTGAGGCTG | + |
|
Preference number: 5 (lower is better) Translates to: DTILVPSLFIFFSMF*RENAFLRLSTFLRL Trigger: CAGCCTCAAGAAAGTCGATAGCCTCAAGAAAGCGTTTTCTCGTCAGAACATCGAGAAAAAGATGAACAAGCTGGGAACCAAGATCGTATC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000051572.8 |
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| CDS-3UTR CAA 90 bp | GTTACACCATCAACACCCATTATTCACCTCACTCCTTCTCTGAAAGTCAGAGTGAGTTGTTCCCTCTCCTaGCTGATTTCTCAGCATCTT | + |
|
Preference number: 5 (lower is better) Translates to: VTPSTPIIHLTPSLKVRVSCSLS*LISQHL Trigger: AAGATGCTGAGAAATCAGCAAGGAGAGGGAACAACT...CACTCTGACTTTCAGAGAAGGAGTGAGGTGAATAATGGGTGTTGATGGTGTAAC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000051572.8 |
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| CDS-3UTR CAA 90 bp | GAAGAGGTTACACCATCAACACCCATTATTCACCTCACTCCTTCTCTGAAAGTCAGGCTATCGACTTTCTaGAGGCTGGATCTTTTTATT | + |
|
Preference number: 5 (lower is better) Translates to: EEVTPSTPIIHLTPSLKVRLSTF*RLDLFI Trigger: AATAAAAAGATCCAGCCTCAAGAAAGTCGATAGCCT...GACTTTCAGAGAAGGAGTGAGGTGAATAATGGGTGTTGATGGTGTAACCTCTTC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000051572.8 |
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| CDS-3UTR CAA 90 bp | ACACAGGCATGGTTAGTTCAGCAATTCAGTATTTGGGGTTACATTAATTGCAGTATCTTGGTTCCCAGCTaGTTCATCTTTTTCTCGATG | + |
|
Preference number: 5 (lower is better) Translates to: TQAWLVQQFSIWGYINCSILVPS*FIFFSM Trigger: CATCGAGAAAAAGATGAACAAGCTGGGAACCAAGAT...ACTGCAATTAATGTAACCCCAAATACTGAATTGCTGAACTAACCATGCCTGTGT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000051572.8 |
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| CDS CCA 72 bp | CATTCACCTGCGAGTTGTCTCGGATGGCCTCCTCTGTaGACCCCAGGTTCAGGCTGGGGCTCGGTGTGGAGG | + |
|
Preference number: 6 (lower is better) Translates to: HSPASCLGWPPL*TPGSGWGSVWR Trigger: CCTCCACACCGAGCCCCAGCCTGAACCTGGGGTCCACAGAGGAGGCCATCCGAGACAACTCGCAGGTGAATG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000051572.8 |
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| CDS GCA 72 bp | TTCTGCGCTGCCCTCCATCAGGCCACTGGGGAGGGATaGTTCAGAAAGACCCTCTGTGAACGAACCCTCCTC | + |
|
Preference number: 6 (lower is better) Translates to: FCAALHQATGEG*FRKTLCERTLL Trigger: GAGGAGGGTTCGTTCACAGAGGGTCTTTCTGAAGCATCCCTCCCCAGTGGCCTGATGGAGGGCAGCGCAGAA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000051572.8 |
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| CDS CCA 72 bp | TGGGGCTCGGTGTGGAGGAAGGCATTGGGCTGGGGCTaGATGGCTTCTCCTGGAGCATGTCTGTGTTTGGAT | + |
|
Preference number: 6 (lower is better) Translates to: WGSVWRKALGWG*MASPGACLCLD Trigger: ATCCAAACACAGACATGCTCCAGGAGAAGCCATCCAGCCCCAGCCCAATGCCTTCCTCCACACCGAGCCCCA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000051572.8 |
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| CDS TCA 72 bp | GGTCGTTCTGGATGCCCTTCACCGAGCCCTCCAGGTTaGTCTGACGCTGTTCCATGTTGTGCTGGTTCTCCC | + |
|
Preference number: 6 (lower is better) Translates to: GRSGCPSPSPPG*SDAVPCCAGSP Trigger: GGGAGAACCAGCACAACATGGAACAGCGTCAGATCAACCTGGAGGGCTCGGTGAAGGGCATCCAGAACGACC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000051572.8 |
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| CDS GCA 72 bp | TTATCCAGGAGTGTGTGCACGGTGACAGCATTCACCTaGGAGTTGTCTCGGATGGCCTCCTCTGTGGACCCC | + |
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Preference number: 6 (lower is better) Translates to: LSRSVCTVTAFT*ELSRMASSVDP Trigger: GGGGTCCACAGAGGAGGCCATCCGAGACAACTCGCAGGTGAATGCTGTCACCGTGCACACACTCCTGGATAA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000051572.8 |
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| CDS CAA 90 bp | AAGATGAGCACTTTGAAGTGGTTGCGTCGGAGGAGTTGGGCGTGGTaGTTCTCCAGTCTCTTCACCTGGACACACTGCCTCTCGAGGCGC | + |
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Preference number: 6 (lower is better) Translates to: KMSTLKWLRRRSWAW*FSSLFTWTHCLSRR Trigger: GCGCCTCGAGAGGCAGTGTGTCCAGGTGAAGAGACTGGAGAACAACCACGCCCAACTCCTCCGACGCAACCACTTCAAAGTGCTCATCTT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000051572.8 |
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| CDS TCA 72 bp | TTCTGGATGCCCTTCACCGAGCCCTCCAGGTTGATCTaGCGCTGTTCCATGTTGTGCTGGTTCTCCCTCACG | + |
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Preference number: 6 (lower is better) Translates to: FWMPFTEPSRLI*RCSMLCWFSLT Trigger: CGTGAGGGAGAACCAGCACAACATGGAACAGCGTCAGATCAACCTGGAGGGCTCGGTGAAGGGCATCCAGAA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000051572.8 |
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| CDS TCA 72 bp | CCTGTTTCTCACTGGGTTCCTCCATCTCCTCGGAGTTaGGCATGTAGCCACTCTCATAGCGCACCTGCTGGG | + |
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Preference number: 6 (lower is better) Translates to: PVSHWVPPSPRS*ACSHSHSAPAG Trigger: CCCAGCAGGTGCGCTATGAGAGTGGCTACATGCTCAACTCCGAGGAGATGGAGGAACCCAGTGAGAAACAGG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000051572.8 |
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| CDS CAA 72 bp | CCGCATTACTGCCCACGGCTGAGTTGTTCCCTCTCCTaGCTGATTTCTCAGCATCTTCTGCGCTGCCCTCCA | + |
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Preference number: 6 (lower is better) Translates to: PHYCPRLSCSLS*LISQHLLRCPP Trigger: TGGAGGGCAGCGCAGAAGATGCTGAGAAATCAGCAAGGAGAGGGAACAACTCAGCCGTGGGCAGTAATGCGG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000051572.8 |
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| CDS CCA 72 bp | AGCACTTTGAAGTGGTTGCGTCGGAGGAGTTGGGCGTaGTTGTTCTCCAGTCTCTTCACCTGGACACACTGC | + |
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Preference number: 6 (lower is better) Translates to: STLKWLRRRSWA*LFSSLFTWTHC Trigger: GCAGTGTGTCCAGGTGAAGAGACTGGAGAACAACCACGCCCAACTCCTCCGACGCAACCACTTCAAAGTGCT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000051572.8 |
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| CDS CAA 72 bp | ACTTTGAAGTGGTTGCGTCGGAGGAGTTGGGCGTGGTaGTTCTCCAGTCTCTTCACCTGGACACACTGCCTC | + |
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Preference number: 6 (lower is better) Translates to: TLKWLRRRSWAW*FSSLFTWTHCL Trigger: GAGGCAGTGTGTCCAGGTGAAGAGACTGGAGAACAACCACGCCCAACTCCTCCGACGCAACCACTTCAAAGT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000051572.8 |
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| CDS CAA 90 bp | CGCTGTTCCATGTTGTGCTGGTTCTCCCTCACGGCGTCCAGCATGTaGACCAATTTATCCAGGAGTGTGTGCACGGTGACAGCATTCACC | + |
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Preference number: 6 (lower is better) Translates to: RCSMLCWFSLTASSM*TNLSRSVCTVTAFT Trigger: GGTGAATGCTGTCACCGTGCACACACTCCTGGATAAATTGGTCAACATGCTGGACGCCGTGAGGGAGAACCAGCACAACATGGAACAGCG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000051572.8 |
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| CDS CAA 90 bp | GCTTCCTCATCACGGGGCAATTCGTCATCAGAGGAGAGGTCCACGTaGTGCAGAGTTTCCTCCAGGGACTTGTTCTCATCAGCAAGCTCC | + |
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Preference number: 6 (lower is better) Translates to: ASSSRGNSSSEERST*CRVSSRDLFSSASS Trigger: GGAGCTTGCTGATGAGAACAAGTCCCTGGAGGAAACTCTGCACAACGTGGACCTCTCCTCTGATGACGAATTGCCCCGTGATGAGGAAGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000051572.8 |
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| CDS GCA 72 bp | GCGTCCAGCATGTTGACCAATTTATCCAGGAGTGTGTaGACGGTGACAGCATTCACCTGCGAGTTGTCTCGG | + |
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Preference number: 6 (lower is better) Translates to: ASSMLTNLSRSV*TVTAFTCELSR Trigger: CCGAGACAACTCGCAGGTGAATGCTGTCACCGTGCACACACTCCTGGATAAATTGGTCAACATGCTGGACGC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000051572.8 |
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| CDS CCA 72 bp | CCTCCTCGCGGTCCTCCTGCATCTGGTCTTCCAACTTaGTCTCATTTTCTACAGAGCTTTCTCCCTCTCGGA | + |
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Preference number: 6 (lower is better) Translates to: PPRGPPASGLPT*SHFLQSFLPLG Trigger: TCCGAGAGGGAGAAAGCTCTGTAGAAAATGAGACCAAGTTGGAAGACCAGATGCAGGAGGACCGCGAGGAGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000051572.8 |
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| CDS CAA 72 bp | GAAGATGAGCACTTTGAAGTGGTTGCGTCGGAGGAGTaGGGCGTGGTTGTTCTCCAGTCTCTTCACCTGGAC | + |
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Preference number: 6 (lower is better) Translates to: EDEHFEVVASEE*GVVVLQSLHLD Trigger: GTCCAGGTGAAGAGACTGGAGAACAACCACGCCCAACTCCTCCGACGCAACCACTTCAAAGTGCTCATCTTC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000051572.8 |
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| CDS CAA 72 bp | GCAGGGATCTCACTTTCTTCCTGGAAGATGAGCACTTaGAAGTGGTTGCGTCGGAGGAGTTGGGCGTGGTTG | + |
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Preference number: 6 (lower is better) Translates to: AGISLSSWKMST*KWLRRRSWAWL Trigger: CAACCACGCCCAACTCCTCCGACGCAACCACTTCAAAGTGCTCATCTTCCAGGAAGAAAGTGAGATCCCTGC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000051572.8 |
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| CDS CAA 90 bp | TTCTTCCTGGAAGATGAGCACTTTGAAGTGGTTGCGTCGGAGGAGTaGGGCGTGGTTGTTCTCCAGTCTCTTCACCTGGACACACTGCCT | + |
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Preference number: 6 (lower is better) Translates to: FFLEDEHFEVVASEE*GVVVLQSLHLDTLP Trigger: AGGCAGTGTGTCCAGGTGAAGAGACTGGAGAACAACCACGCCCAACTCCTCCGACGCAACCACTTCAAAGTGCTCATCTTCCAGGAAGAA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000051572.8 |
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| CDS GCA 72 bp | AGACCCTCTGTGAACGAACCCTCCTCGCGGTCCTCCTaGATCTGGTCTTCCAACTTGGTCTCATTTTCTACA | + |
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Preference number: 6 (lower is better) Translates to: RPSVNEPSSRSS*IWSSNLVSFST Trigger: TGTAGAAAATGAGACCAAGTTGGAAGACCAGATGCAGGAGGACCGCGAGGAGGGTTCGTTCACAGAGGGTCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000051572.8 |
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| CDS CCA 72 bp | AAGATGAGCACTTTGAAGTGGTTGCGTCGGAGGAGTTaGGCGTGGTTGTTCTCCAGTCTCTTCACCTGGACA | + |
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Preference number: 6 (lower is better) Translates to: KMSTLKWLRRRS*AWLFSSLFTWT Trigger: TGTCCAGGTGAAGAGACTGGAGAACAACCACGCCCAACTCCTCCGACGCAACCACTTCAAAGTGCTCATCTT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000051572.8 |
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| CDS CAA 72 bp | ATGTTGTGCTGGTTCTCCCTCACGGCGTCCAGCATGTaGACCAATTTATCCAGGAGTGTGTGCACGGTGACA | + |
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Preference number: 6 (lower is better) Translates to: MLCWFSLTASSM*TNLSRSVCTVT Trigger: TGTCACCGTGCACACACTCCTGGATAAATTGGTCAACATGCTGGACGCCGTGAGGGAGAACCAGCACAACAT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000051572.8 |
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| CDS CAA 90 bp | GTGAACGAACCCTCCTCGCGGTCCTCCTGCATCTGGTCTTCCAACTaGGTCTCATTTTCTACAGAGCTTTCTCCCTCTCGGACTTTCTTA | + |
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Preference number: 6 (lower is better) Translates to: VNEPSSRSSCIWSSN*VSFSTELSPSRTFL Trigger: TAAGAAAGTCCGAGAGGGAGAAAGCTCTGTAGAAAATGAGACCAAGTTGGAAGACCAGATGCAGGAGGACCGCGAGGAGGGTTCGTTCAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000051572.8 |
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| CDS CCA 72 bp | ATCTCACTTTCTTCCTGGAAGATGAGCACTTTGAAGTaGTTGCGTCGGAGGAGTTGGGCGTGGTTGTTCTCC | + |
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Preference number: 6 (lower is better) Translates to: ISLSSWKMSTLK*LRRRSWAWLFS Trigger: GGAGAACAACCACGCCCAACTCCTCCGACGCAACCACTTCAAAGTGCTCATCTTCCAGGAAGAAAGTGAGAT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000051572.8 |
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| CDS CAA 72 bp | TCAATGGTCAGATCCGCATTACTGCCCACGGCTGAGTaGTTCCCTCTCCTTGCTGATTTCTCAGCATCTTCT | + |
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Preference number: 6 (lower is better) Translates to: SMVRSALLPTAE*FPLLADFSASS Trigger: AGAAGATGCTGAGAAATCAGCAAGGAGAGGGAACAACTCAGCCGTGGGCAGTAATGCGGATCTGACCATTGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000051572.8 |
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| CDS GCA 72 bp | GGGAGAAACCTTGAAGGGGGAGCTTTTCCCAGAAGATaGTTTCTGGTGGTTGGGTGTGAGCGATTTCTTAAT | + |
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Preference number: 6 (lower is better) Translates to: GRNLEGGAFPRR*FLVVGCERFLN Trigger: ATTAAGAAATCGCTCACACCCAACCACCAGAAAGCATCTTCTGGGAAAAGCTCCCCCTTCAAGGTTTCTCCC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000051572.8 |
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| CDS TCA 72 bp | TTGGTTCCCAGCTTGTTCATCTTTTTCTCGATGTTCTaGCGAGAAAACGCTTTCTTGAGGCTATCGACTTTC | + |
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Preference number: 6 (lower is better) Translates to: LVPSLFIFFSMF*RENAFLRLSTF Trigger: GAAAGTCGATAGCCTCAAGAAAGCGTTTTCTCGTCAGAACATCGAGAAAAAGATGAACAAGCTGGGAACCAA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000051572.8 |
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