Pregenerated sensors for CAVIN1 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000004044Ensembl transcript IDs: ENSMUST00000060792.6
Found 140 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | TTGCTCATGCTGGCTTTGAGCTCACTCTGCAGCCCAGGCAGGCCTTaGACTTACAAGTCTCCTGCCTCAGCCTCTCTGGGAGAGCAAGCT | + |
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Preference number: 1 (lower is better) Translates to: LLMLALSSLCSPGRP*TYKSPASASLGEQA Trigger: AGCTTGCTCTCCCAGAGAGGCTGAGGCAGGAGACTTGTAAGTTCAAGGCCTGCCTGGGCTGCAGAGTGAGCTCAAAGCCAGCATGAGCAA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000060792.6 |
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| 3UTR CCA 90 bp | ATTAGAGAAAGATCCATGGTAGAAGCAGCTGAGAGGGAGTTAGGGTaGGCAAGCCAGCTGGCCCTGCTGCTCCAGCTTCCAGCTAGGGAG | + |
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Preference number: 1 (lower is better) Translates to: IRERSMVEAAERELG*ASQLALLLQLPARE Trigger: CTCCCTAGCTGGAAGCTGGAGCAGCAGGGCCAGCTGGCTTGCCCACCCTAACTCCCTCTCAGCTGCTTCTACCATGGATCTTTCTCTAAT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000060792.6 |
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| 3UTR CCA 90 bp | CCTACCACCCTTTCCCAGGCTCTACCCGCCTTCTGCTTATTTTGGTaGGGCCTTTATCCACCAAACACTCTGCCTTTTACCTCACCCTAT | + |
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Preference number: 1 (lower is better) Translates to: PTTLSQALPAFCLFW*GLYPPNTLPFTSPY Trigger: ATAGGGTGAGGTAAAAGGCAGAGTGTTTGGTGGATAAAGGCCCCACCAAAATAAGCAGAAGGCGGGTAGAGCCTGGGAAAGGGTGGTAGG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000060792.6 |
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| 3UTR GCA 90 bp | AAGCTGCCCCTACAAGGGTTGTCTTTAGGATTTGCTCTTTCCTCTTaGAGAAATTTGGGCTTTGGAGTCTCCCAGGGTGAGGAAAAGGAG | + |
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Preference number: 1 (lower is better) Translates to: KLPLQGLSLGFALSS*RNLGFGVSQGEEKE Trigger: CTCCTTTTCCTCACCCTGGGAGACTCCAAAGCCCAAATTTCTGCAAGAGGAAAGAGCAAATCCTAAAGACAACCCTTGTAGGGGCAGCTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000060792.6 |
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| 3UTR CCA 90 bp | TTCCTAGATTCTGGAAGAGAGAATCCAATCAGGCTGACGTCTCTTTaGAACACACTTTCTAAAACTGACTTCCCTCCTGACCCGGAAGCT | + |
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Preference number: 1 (lower is better) Translates to: FLDSGRENPIRLTSL*NTLSKTDFPPDPEA Trigger: AGCTTCCGGGTCAGGAGGGAAGTCAGTTTTAGAAAGTGTGTTCCAAAGAGACGTCAGCCTGATTGGATTCTCTCTTCCAGAATCTAGGAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000060792.6 |
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| 3UTR CCA 90 bp | TTTCAGGTAAAGGGGGCCCCAAAGGCAAGGAACACAGGAGGGTCTTaGCAAGCTCTAAAGTTTCACATTAGAGAAAGATCCATGGTAGAA | + |
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Preference number: 1 (lower is better) Translates to: FQVKGAPKARNTGGS*QALKFHIRERSMVE Trigger: TTCTACCATGGATCTTTCTCTAATGTGAAACTTTAGAGCTTGCCAAGACCCTCCTGTGTTCCTTGCCTTTGGGGCCCCCTTTACCTGAAA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000060792.6 |
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| 3UTR CAA 90 bp | CTGCTGCTCCAGCTTCCAGCTAGGGAGCTCAGCTCCAGAGGCACCTaGCTTTCCCCAGCTGCCAGTTCTCCACAACTCGCTGCTGCCCCC | + |
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Preference number: 2 (lower is better) Translates to: LLLQLPARELSSRGT*LSPAASSPQLAAAP Trigger: GGGGGCAGCAGCGAGTTGTGGAGAACTGGCAGCTGGGGAAAGCAAGGTGCCTCTGGAGCTGAGCTCCCTAGCTGGAAGCTGGAGCAGCAG 63% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000060792.6 |
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| 3UTR-3UTR TCA 90 bp | AGCTTCCAGCTAGGGAGCTCAGCTCCAGAGGCACCTTGCTTTCCCCAGCTGCCATGGAGTCTCCCAGGGTaGGGAAAAGGAGAAACAGCT | + |
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Preference number: 2 (lower is better) Translates to: SFQLGSSAPEAPCFPQLPWSLPG*GKGETA Trigger: AGCTGTTTCTCCTTTTCCTCACCCTGGGAGACTCCA...TGGCAGCTGGGGAAAGCAAGGTGCCTCTGGAGCTGAGCTCCCTAGCTGGAAGCT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000060792.6 |
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| 3UTR CAA 90 bp | ATTGCTCATGCTGGCTTTGAGCTCACTCTGCAGCCCAGGCAGGCCTaGAACTTACAAGTCTCCTGCCTCAGCCTCTCTGGGAGAGCAAGC | + |
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Preference number: 2 (lower is better) Translates to: IAHAGFELTLQPRQA*NLQVSCLSLSGRAS Trigger: GCTTGCTCTCCCAGAGAGGCTGAGGCAGGAGACTTGTAAGTTCAAGGCCTGCCTGGGCTGCAGAGTGAGCTCAAAGCCAGCATGAGCAAT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000060792.6 |
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| 3UTR-3UTR TCA 90 bp | CTCAGGTCTTCCAGTGGGCCACCTCTGGGCAAAGGTCTCTCTACACACATTTTAAGCCCAGGCAGGCCTTaGACTTACAAGTCTCCTGCC | + |
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Preference number: 2 (lower is better) Translates to: LRSSSGPPLGKGLSTHILSPGRP*TYKSPA Trigger: GGCAGGAGACTTGTAAGTTCAAGGCCTGCCTGGGCT...TAAAATGTGTGTAGAGAGACCTTTGCCCAGAGGTGGCCCACTGGAAGACCTGAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000060792.6 |
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| 3UTR-3UTR CCA 90 bp | CCCGGAAGGCAGTTCCTAGATTCTGGAAGAGAGAATCCAATCAGGCTGACGTCTCCAGTGGGCCACCTCTaGGCAAAGGTCTCTCTACAC | + |
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Preference number: 2 (lower is better) Translates to: PGRQFLDSGRENPIRLTSPVGHL*AKVSLH Trigger: GTGTAGAGAGACCTTTGCCCAGAGGTGGCCCACTGG...AGACGTCAGCCTGATTGGATTCTCTCTTCCAGAATCTAGGAACTGCCTTCCGGG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000060792.6 |
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| 3UTR-3UTR GCA 90 bp | AATCAAGCCTTGGACATGAAGCAGCACCCCACTCTCCCCAACTTTCAGGTAAAGCTCGCTGCTGCCCCCTaGTGGAACCCTAATTTTCCG | + |
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Preference number: 2 (lower is better) Translates to: NQALDMKQHPTLPNFQVKLAAAP*WNPNFP Trigger: CGGAAAATTAGGGTTCCAGCAGGGGGCAGCAGCGAG...CTTTACCTGAAAGTTGGGGAGAGTGGGGTGCTGCTTCATGTCCAAGGCTTGATT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENSMUST00000060792.6 |
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| 3UTR-3UTR GCA 90 bp | AAGTTTCACATTAGAGAAAGATCCATGGTAGAAGCAGCTGAGAGGGAGTTAGGGGCCAGCTGGCCCTGCTaGTCCAGCTTCCAGCTAGGG | + |
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Preference number: 2 (lower is better) Translates to: KFHIRERSMVEAAERELGASWPC*SSFQLG Trigger: CCCTAGCTGGAAGCTGGAGCAGCAGGGCCAGCTGGC...CCCTAACTCCCTCTCAGCTGCTTCTACCATGGATCTTTCTCTAATGTGAAACTT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000060792.6 |
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| 3UTR-3UTR CCA 90 bp | CACTTACCCACCCTCCTCAGCTTCTCCGTCTCCAAGCATTCAGAGGAGGGAAGGCTAATTTTCCGGGCATaGAAAACAAGGCTTCCCGGA | + |
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Preference number: 2 (lower is better) Translates to: HLPTLLSFSVSKHSEEGRLIFRA*KTRLPG Trigger: TCCGGGAAGCCTTGTTTTCCATGCCCGGAAAATTAG...CCTTCCCTCCTCTGAATGCTTGGAGACGGAGAAGCTGAGGAGGGTGGGTAAGTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000060792.6 |
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| 3UTR CAA 90 bp | GATACACCCCCACCACCTCTTATTTTGAAACTGCATCTGGCTAAATaGCTCATGCTGGCTTTGAGCTCACTCTGCAGCCCAGGCAGGCCT | + |
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Preference number: 2 (lower is better) Translates to: DTPPPPLILKLHLAK*LMLALSSLCSPGRP Trigger: AGGCCTGCCTGGGCTGCAGAGTGAGCTCAAAGCCAGCATGAGCAATTTAGCCAGATGCAGTTTCAAAATAAGAGGTGGTGGGGGTGTATC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000060792.6 |
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| 3UTR-3UTR TCA 90 bp | AATCAAGCCTTGGACATGAAGCAGCACCCCACTCTCCCCAACTTTCAGGTAAAGCAAGGGCTCTATCAGTaGTACACCCCCACCACCTCT | + |
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Preference number: 2 (lower is better) Translates to: NQALDMKQHPTLPNFQVKQGLYQ*YTPTTS Trigger: AGAGGTGGTGGGGGTGTATCACTGATAGAGCCCTTG...CTTTACCTGAAAGTTGGGGAGAGTGGGGTGCTGCTTCATGTCCAAGGCTTGATT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000060792.6 |
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| 3UTR-3UTR CCA 90 bp | TTTCACATTAGAGAAAGATCCATGGTAGAAGCAGCTGAGAGGGAGTTAGGGTGGCCTCAGGTCTTCCAGTaGGCCACCTCTGGGCAAAGG | + |
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Preference number: 2 (lower is better) Translates to: FHIRERSMVEAAERELGWPQVFQ*ATSGQR Trigger: CCTTTGCCCAGAGGTGGCCCACTGGAAGACCTGAGG...CCACCCTAACTCCCTCTCAGCTGCTTCTACCATGGATCTTTCTCTAATGTGAAA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000060792.6 |
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| 3UTR CAA 90 bp | GGTGAGGAGAAGGAAGTAGCCTGTAGCTATCAATTGGGGGAGGTGTaGCCTGCTCCTGATCAGCCATTAAAGGGGGAACAAATGTGTCCT | + |
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Preference number: 2 (lower is better) Translates to: GEEKEVACSYQLGEV*PAPDQPLKGEQMCP Trigger: AGGACACATTTGTTCCCCCTTTAATGGCTGATCAGGAGCAGGCAACACCTCCCCCAATTGATAGCTACAGGCTACTTCCTTCTCCTCACC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000060792.6 |
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| 3UTR-3UTR GCA 90 bp | CCCGGAAGGCAGTTCCTAGATTCTGGAAGAGAGAATCCAATCAGGCTGACGTCTCTGGCACTAGAAAGCTaGCCCTACAAGGGTTGTCTT | + |
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Preference number: 2 (lower is better) Translates to: PGRQFLDSGRENPIRLTSLALES*PYKGCL Trigger: AAGACAACCCTTGTAGGGGCAGCTTTCTAGTGCCAG...AGACGTCAGCCTGATTGGATTCTCTCTTCCAGAATCTAGGAACTGCCTTCCGGG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000060792.6 |
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| 3UTR-3UTR GCA 90 bp | TCTCTTTGGAACACACTTTCTAAAACTGACTTCCCTCCTGACCCGGAAGCTGCCAACTTACAAGTCTCCTaGCTCAGCCTCTCTGGGAGA | + |
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Preference number: 2 (lower is better) Translates to: SLWNTLSKTDFPPDPEAANLQVS*LSLSGR Trigger: TCTCCCAGAGAGGCTGAGGCAGGAGACTTGTAAGTT...GGCAGCTTCCGGGTCAGGAGGGAAGTCAGTTTTAGAAAGTGTGTTCCAAAGAGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000060792.6 |
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| 3UTR-3UTR CCA 90 bp | CACTTACCCACCCTCCTCAGCTTCTCCGTCTCCAAGCATTCAGAGGAGGGAAGGAGGCTGACGTCTCTTTaGAACACACTTTCTAAAACT | + |
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Preference number: 2 (lower is better) Translates to: HLPTLLSFSVSKHSEEGRRLTSL*NTLSKT Trigger: AGTTTTAGAAAGTGTGTTCCAAAGAGACGTCAGCCT...CCTTCCCTCCTCTGAATGCTTGGAGACGGAGAAGCTGAGGAGGGTGGGTAAGTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000060792.6 |
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| 3UTR-3UTR CCA 90 bp | TCAGTAACTATAAGAAATCAAGCCTTGGACATGAAGCAGCACCCCACTCTCCCCCCTCTTGCAGAAATTTaGGCTTTGGAGTCTCCCAGG | + |
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Preference number: 2 (lower is better) Translates to: SVTIRNQALDMKQHPTLPPLAEI*ALESPR Trigger: CCTGGGAGACTCCAAAGCCCAAATTTCTGCAAGAGG...GGGGAGAGTGGGGTGCTGCTTCATGTCCAAGGCTTGATTTCTTATAGTTACTGA 49% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000060792.6 |
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| 3UTR-3UTR TCA 90 bp | ACAACCAGGGCATGGGTCATTCTTCCCATATCCTACCCAGACTGTGTCCAAATTGCAAAAGAGAAAGTTTaGAAAGGGAAAGGCGGTGTG | + |
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Preference number: 2 (lower is better) Translates to: TTRAWVILPISYPDCVQIAKEKV*KGKGGV Trigger: CACACCGCCTTTCCCTTTTCAAACTTTCTCTTTTGC...AATTTGGACACAGTCTGGGTAGGATATGGGAAGAATGACCCATGCCCTGGTTGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000060792.6 |
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| 3UTR-3UTR TCA 90 bp | ATTAAAGGGGGAACAAATGTGTCCTTAGGAGAAAACCTGGTCAGTAACTATAAGTGCTCATGCTGGCTTTaGGCTCACTCTGCAGCCCAG | + |
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Preference number: 2 (lower is better) Translates to: IKGGTNVSLGENLVSNYKCSCWL*AHSAAQ Trigger: CTGGGCTGCAGAGTGAGCTCAAAGCCAGCATGAGCA...CTTATAGTTACTGACCAGGTTTTCTCCTAAGGACACATTTGTTCCCCCTTTAAT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000060792.6 |
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| 3UTR-3UTR CCA 90 bp | AATCAAGCCTTGGACATGAAGCAGCACCCCACTCTCCCCAACTTTCAGGTAAAGGCAGTTCCTAGATTCTaGAAGAGAGAATCCAATCAG | + |
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Preference number: 2 (lower is better) Translates to: NQALDMKQHPTLPNFQVKAVPRF*KRESNQ Trigger: CTGATTGGATTCTCTCTTCCAGAATCTAGGAACTGC...CTTTACCTGAAAGTTGGGGAGAGTGGGGTGCTGCTTCATGTCCAAGGCTTGATT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000060792.6 |
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| 3UTR-3UTR CCA 90 bp | TCAGTAACTATAAGAAATCAAGCCTTGGACATGAAGCAGCACCCCACTCTCCCCAAAATAAAAGCATCCTaGATCAAGACAACCAGGGCA | + |
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Preference number: 2 (lower is better) Translates to: SVTIRNQALDMKQHPTLPKIKAS*IKTTRA Trigger: TGCCCTGGTTGTCTTGATCCAGGATGCTTTTATTTT...GGGGAGAGTGGGGTGCTGCTTCATGTCCAAGGCTTGATTTCTTATAGTTACTGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENSMUST00000060792.6 |
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| 3UTR GCA 72 bp | GGAGCTCAGCTCCAGAGGCACCTTGCTTTCCCCAGCTaGCAGTTCTCCACAACTCGCTGCTGCCCCCTGCTG | + |
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Preference number: 3 (lower is better) Translates to: GAQLQRHLAFPS*QFSTTRCCPLL Trigger: CAGCAGGGGGCAGCAGCGAGTTGTGGAGAACTGGCAGCTGGGGAAAGCAAGGTGCCTCTGGAGCTGAGCTCC 64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000060792.6 |
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| 3UTR-3UTR CAA 90 bp | AACACAGCAACTCAAGGGACTCCCCTAGAGCCCACAGGAAACTGCATCTGCCCATTGCTCATGCTGGCTTaGAGCTCACTCTGCAGCCCA | + |
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Preference number: 3 (lower is better) Translates to: NTATQGTPLEPTGNCICPLLMLA*SSLCSP Trigger: TGGGCTGCAGAGTGAGCTCAAAGCCAGCATGAGCAA...TGGGCAGATGCAGTTTCCTGTGGGCTCTAGGGGAGTCCCTTGAGTTGCTGTGTT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000060792.6 |
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| 3UTR CCA 72 bp | TGCCTTAGTTCCCCCAAAGACCCTCAGGTCTTCCAGTaGGCCACCTCTGGGCAAAGGTCTCTCTACACACAT | + |
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Preference number: 3 (lower is better) Translates to: CLSSPKDPQVFQ*ATSGQRSLYTH Trigger: ATGTGTGTAGAGAGACCTTTGCCCAGAGGTGGCCCACTGGAAGACCTGAGGGTCTTTGGGGGAACTAAGGCA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000060792.6 |
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| 3UTR-3UTR CAA 90 bp | CACTTACCCACCCTCCTCAGCTTCTCCGTCTCCAAGCATTCAGAGGAGGGAAGGCTGCATCTGGCTAAATaGCTCATGCTGGCTTTGAGC | + |
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Preference number: 3 (lower is better) Translates to: HLPTLLSFSVSKHSEEGRLHLAK*LMLALS Trigger: GCTCAAAGCCAGCATGAGCAATTTAGCCAGATGCAG...CCTTCCCTCCTCTGAATGCTTGGAGACGGAGAAGCTGAGGAGGGTGGGTAAGTG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000060792.6 |
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| 3UTR-3UTR CAA 90 bp | CACTTACCCACCCTCCTCAGCTTCTCCGTCTCCAAGCATTCAGAGGAGGGAAGGCTGCCCCTACAAGGGTaGTCTTTAGGATTTGCTCTT | + |
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Preference number: 3 (lower is better) Translates to: HLPTLLSFSVSKHSEEGRLPLQG*SLGFAL Trigger: AAGAGCAAATCCTAAAGACAACCCTTGTAGGGGCAG...CCTTCCCTCCTCTGAATGCTTGGAGACGGAGAAGCTGAGGAGGGTGGGTAAGTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000060792.6 |
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| 3UTR-3UTR CAA 90 bp | TCAGTAACTATAAGAAATCAAGCCTTGGACATGAAGCAGCACCCCACTCTCCCCAGCTCCAGAGGCACCTaGCTTTCCCCAGCTGCCAGT | + |
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Preference number: 3 (lower is better) Translates to: SVTIRNQALDMKQHPTLPSSRGT*LSPAAS Trigger: ACTGGCAGCTGGGGAAAGCAAGGTGCCTCTGGAGCT...GGGGAGAGTGGGGTGCTGCTTCATGTCCAAGGCTTGATTTCTTATAGTTACTGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000060792.6 |
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| 3UTR GCA 72 bp | ACACCTACCACCCTTTCCCAGGCTCTACCCGCCTTCTaGTTATTTTGGTGGGGCCTTTATCCACCAAACACT | + |
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Preference number: 3 (lower is better) Translates to: TPTTLSQALPAF*LFWWGLYPPNT Trigger: AGTGTTTGGTGGATAAAGGCCCCACCAAAATAAGCAGAAGGCGGGTAGAGCCTGGGAAAGGGTGGTAGGTGT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000060792.6 |
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| 3UTR-3UTR CAA 90 bp | TCTCTTTGGAACACACTTTCTAAAACTGACTTCCCTCCTGACCCGGAAGCTGCCGCAGAAATTTGGGCTTaGGAGTCTCCCAGGGTGAGG | + |
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Preference number: 3 (lower is better) Translates to: SLWNTLSKTDFPPDPEAAAEIWA*ESPRVR Trigger: CCTCACCCTGGGAGACTCCAAAGCCCAAATTTCTGC...GGCAGCTTCCGGGTCAGGAGGGAAGTCAGTTTTAGAAAGTGTGTTCCAAAGAGA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000060792.6 |
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| 3UTR TCA 72 bp | GACTTCCCTCCTGACCCGGAAGCTGCCCTGCTGTCTTaGGATCCTACCAAAGTGGGACTCTTGAATTTCTTT | + |
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Preference number: 3 (lower is better) Translates to: DFPPDPEAALLS*DPTKVGLLNFF Trigger: AAAGAAATTCAAGAGTCCCACTTTGGTAGGATCTCAAGACAGCAGGGCAGCTTCCGGGTCAGGAGGGAAGTC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000060792.6 |
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| 3UTR CCA 72 bp | CTTTCCCAGGCTCTACCCGCCTTCTGCTTATTTTGGTaGGGCCTTTATCCACCAAACACTCTGCCTTTTACC | + |
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Preference number: 3 (lower is better) Translates to: LSQALPAFCLFW*GLYPPNTLPFT Trigger: GGTAAAAGGCAGAGTGTTTGGTGGATAAAGGCCCCACCAAAATAAGCAGAAGGCGGGTAGAGCCTGGGAAAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000060792.6 |
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| 3UTR GCA 72 bp | TATCCACCAAACACTCTGCCTTTTACCTCACCCTATTaGCTTAGTTCCCCCAAAGACCCTCAGGTCTTCCAG | + |
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Preference number: 3 (lower is better) Translates to: YPPNTLPFTSPY*LSSPKDPQVFQ Trigger: CTGGAAGACCTGAGGGTCTTTGGGGGAACTAAGGCAATAGGGTGAGGTAAAAGGCAGAGTGTTTGGTGGATA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000060792.6 |
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| 3UTR CCA 72 bp | AAGGGGGCCCCAAAGGCAAGGAACACAGGAGGGTCTTaGCAAGCTCTAAAGTTTCACATTAGAGAAAGATCC | + |
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Preference number: 3 (lower is better) Translates to: KGAPKARNTGGS*QALKFHIRERS Trigger: GGATCTTTCTCTAATGTGAAACTTTAGAGCTTGCCAAGACCCTCCTGTGTTCCTTGCCTTTGGGGCCCCCTT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000060792.6 |
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| 3UTR-3UTR CAA 90 bp | ATTAAAGGGGGAACAAATGTGTCCTTAGGAGAAAACCTGGTCAGTAACTATAAGTCTAAGGCCTGTGCTTaGGAGGGCTGCTCTTCGGGG | + |
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Preference number: 3 (lower is better) Translates to: IKGGTNVSLGENLVSNYKSKACA*EGCSSG Trigger: CCCCGAAGAGCAGCCCTCCAAAGCACAGGCCTTAGA...CTTATAGTTACTGACCAGGTTTTCTCCTAAGGACACATTTGTTCCCCCTTTAAT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000060792.6 |
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| 3UTR-3UTR CAA 90 bp | AATCAAGCCTTGGACATGAAGCAGCACCCCACTCTCCCCAACTTTCAGGTAAAGATTTGCTCTTTCCTCTaGCAGAAATTTGGGCTTTGG | + |
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Preference number: 3 (lower is better) Translates to: NQALDMKQHPTLPNFQVKICSFL*QKFGLW Trigger: CCAAAGCCCAAATTTCTGCAAGAGGAAAGAGCAAAT...CTTTACCTGAAAGTTGGGGAGAGTGGGGTGCTGCTTCATGTCCAAGGCTTGATT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000060792.6 |
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| 3UTR-3UTR CAA 90 bp | TCTCTTTGGAACACACTTTCTAAAACTGACTTCCCTCCTGACCCGGAAGCTGCCCCACCACCTCTTATTTaGAAACTGCATCTGGCTAAA | + |
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Preference number: 3 (lower is better) Translates to: SLWNTLSKTDFPPDPEAAPPPLI*KLHLAK Trigger: TTTAGCCAGATGCAGTTTCAAAATAAGAGGTGGTGG...GGCAGCTTCCGGGTCAGGAGGGAAGTCAGTTTTAGAAAGTGTGTTCCAAAGAGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000060792.6 |
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| 3UTR-3UTR CAA 90 bp | CCCGGAAGGCAGTTCCTAGATTCTGGAAGAGAGAATCCAATCAGGCTGACGTCTACCAAAGTGGGACTCTaGAATTTCTTTGTGTTGTTA | + |
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Preference number: 3 (lower is better) Translates to: PGRQFLDSGRENPIRLTSTKVGL*NFFVLL Trigger: TAACAACACAAAGAAATTCAAGAGTCCCACTTTGGT...AGACGTCAGCCTGATTGGATTCTCTCTTCCAGAATCTAGGAACTGCCTTCCGGG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000060792.6 |
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| 3UTR GCA 72 bp | CTCTCTCTTTCCAAAGAATACTCACGTGCTCCTGTGTaGAGGTTTTGTAGCTTTGTAAATAAGCCCCTCTCC | + |
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Preference number: 3 (lower is better) Translates to: LSLSKEYSRAPV*RFCSFVNKPLS Trigger: GGAGAGGGGCTTATTTACAAAGCTACAAAACCTGCACACAGGAGCACGTGAGTATTCTTTGGAAAGAGAGAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000060792.6 |
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| 3UTR CCA 72 bp | AAAATAAAAGCATCCTGGATCAAGACAACCAGGGCATaGGTCATTCTTCCCATATCCTACCCAGACTGTGTC | + |
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Preference number: 3 (lower is better) Translates to: KIKASWIKTTRA*VILPISYPDCV Trigger: GACACAGTCTGGGTAGGATATGGGAAGAATGACCCATGCCCTGGTTGTCTTGATCCAGGATGCTTTTATTTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000060792.6 |
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| 3UTR CCA 72 bp | TCTGGAAGAGAGAATCCAATCAGGCTGACGTCTCTTTaGAACACACTTTCTAAAACTGACTTCCCTCCTGAC | + |
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Preference number: 3 (lower is better) Translates to: SGRENPIRLTSL*NTLSKTDFPPD Trigger: GTCAGGAGGGAAGTCAGTTTTAGAAAGTGTGTTCCAAAGAGACGTCAGCCTGATTGGATTCTCTCTTCCAGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000060792.6 |
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| CDS-3UTR TCA 90 bp | GAAGCAGCTGAGAGGGAGTTAGGGTGGGCAAGCCAGCTGGCCCTGCTGCTCCAGCGTCCGACTCCTCGGTaGTCTCCAGCAGCGTGTGCA | + |
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Preference number: 4 (lower is better) Translates to: EAAERELGWASQLALLLQRPTPR*SPAACA Trigger: TGCACACGCTGCTGGAGATCACCGAGGAGTCGGACG...CTGGAGCAGCAGGGCCAGCTGGCTTGCCCACCCTAACTCCCTCTCAGCTGCTTC 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000060792.6 |
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| CDS-3UTR TCA 90 bp | GAAGCAGCTGAGAGGGAGTTAGGGTGGGCAAGCCAGCTGGCCCTGCTGCTCCAGCCACATGGTCGGGCGTaGAGGACTTGCGCAGCTTGT | + |
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Preference number: 4 (lower is better) Translates to: EAAERELGWASQLALLLQPHGRA*RTCAAC Trigger: ACAAGCTGCGCAAGTCCTTCACGCCCGACCATGTGG...CTGGAGCAGCAGGGCCAGCTGGCTTGCCCACCCTAACTCCCTCTCAGCTGCTTC 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000060792.6 |
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| CDS-3UTR GCA 90 bp | AGCTTCCAGCTAGGGAGCTCAGCTCCAGAGGCACCTTGCTTTCCCCAGCTGCCAACTTGCTCACGGTGTTaGTCGTGGTGGCGTGCGCCT | + |
|
Preference number: 4 (lower is better) Translates to: SFQLGSSAPEAPCFPQLPTCSRC*SWWRAP Trigger: AGGCGCACGCCACCACGAGCAACACCGTGAGCAAGT...TGGCAGCTGGGGAAAGCAAGGTGCCTCTGGAGCTGAGCTCCCTAGCTGGAAGCT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000060792.6 |
||
| 3UTR CAA 72 bp | CAGCTTCCAGCTAGGGAGCTCAGCTCCAGAGGCACCTaGCTTTCCCCAGCTGCCAGTTCTCCACAACTCGCT | + |
|
Preference number: 4 (lower is better) Translates to: QLPARELSSRGT*LSPAASSPQLA Trigger: AGCGAGTTGTGGAGAACTGGCAGCTGGGGAAAGCAAGGTGCCTCTGGAGCTGAGCTCCCTAGCTGGAAGCTG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000060792.6 |
||
| CDS-3UTR TCA 90 bp | TCAGTAACTATAAGAAATCAAGCCTTGGACATGAAGCAGCACCCCACTCTCCCCGCAGGCCGCTGCGCTTaGTGCGCTCGGCGCGGGACT | + |
|
Preference number: 4 (lower is better) Translates to: SVTIRNQALDMKQHPTLPAGRCA*CARRGT Trigger: AGTCCCGCGCCGAGCGCATCAAGCGCAGCGGCCTGC...GGGGAGAGTGGGGTGCTGCTTCATGTCCAAGGCTTGATTTCTTATAGTTACTGA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000060792.6 |
||
| CDS-3UTR GCA 90 bp | AACACAGCAACTCAAGGGACTCCCCTAGAGCCCACAGGAAACTGCATCTGCCCATTGCTCGTGGTGGCGTaGGCCTTGCCCAGCTTGCTC | + |
|
Preference number: 4 (lower is better) Translates to: NTATQGTPLEPTGNCICPLLVVA*ALPSLL Trigger: GAGCAAGCTGGGCAAGGCGCACGCCACCACGAGCAA...TGGGCAGATGCAGTTTCCTGTGGGCTCTAGGGGAGTCCCTTGAGTTGCTGTGTT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000060792.6 |
||
| CDS-3UTR GCA 90 bp | CTAAAACTGACTTCCCTCCTGACCCGGAAGCTGCCCTGCTGTCTTGAGATCCTATGGTGGCGTGCGCCTTaGCCAGCTTGCTCAGCTCTC | + |
|
Preference number: 4 (lower is better) Translates to: LKLTSLLTRKLPCCLEILWWRAP*PACSAL Trigger: GAGAGCTGAGCAAGCTGGGCAAGGCGCACGCCACCA...TAGGATCTCAAGACAGCAGGGCAGCTTCCGGGTCAGGAGGGAAGTCAGTTTTAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000060792.6 |
||
| CDS-3UTR GCA 90 bp | ACAAGGCTTCCCGGAAGGCAGTTCCTAGATTCTGGAAGAGAGAATCCAATCAGGTGTGCACGTCGGGGCTaGTCCCGCGCAGCAGGTCAG | + |
|
Preference number: 4 (lower is better) Translates to: TRLPGRQFLDSGRENPIRCARRG*SRAAGQ Trigger: CTGACCTGCTGCGCGGGAGCAGCCCCGACGTGCACA...CCTGATTGGATTCTCTCTTCCAGAATCTAGGAACTGCCTTCCGGGAAGCCTTGT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000060792.6 |
||
| CDS-3UTR GCA 90 bp | ACAACCAGGGCATGGGTCATTCTTCCCATATCCTACCCAGACTGTGTCCAAATTCCTGGCGCTCCAGGCTaGCGCGCACGGTCTTCACGT | + |
|
Preference number: 4 (lower is better) Translates to: TTRAWVILPISYPDCVQIPGAPG*RARSSR Trigger: ACGTGAAGACCGTGCGCGGCAGCCTGGAGCGCCAGG...AATTTGGACACAGTCTGGGTAGGATATGGGAAGAATGACCCATGCCCTGGTTGT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000060792.6 |
||
| CDS-3UTR GCA 90 bp | CACTTACCCACCCTCCTCAGCTTCTCCGTCTCCAAGCATTCAGAGGAGGGAAGGCTCCTTCTCAGGCAGTaGCTCCGACTCTTTCAGCGA | + |
|
Preference number: 4 (lower is better) Translates to: HLPTLLSFSVSKHSEEGRLLLRQ*LRLFQR Trigger: TCGCTGAAAGAGTCGGAGGCACTGCCTGAGAAGGAG...CCTTCCCTCCTCTGAATGCTTGGAGACGGAGAAGCTGAGGAGGGTGGGTAAGTG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000060792.6 |
||
| CDS-3UTR CCA 90 bp | CACCCTATTGCCTTAGTTCCCCCAAAGACCCTCAGGTCTTCCAGTGGGCCACCTAGCACACCGTTCACCTaGTCCGACTTGATCAGCTCG | + |
|
Preference number: 4 (lower is better) Translates to: HPIALVPPKTLRSSSGPPSTPFT*SDLISS Trigger: CGAGCTGATCAAGTCGGACCAGGTGAACGGTGTGCT...AGGTGGCCCACTGGAAGACCTGAGGGTCTTTGGGGGAACTAAGGCAATAGGGTG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000060792.6 |
||
| CDS-3UTR CCA 90 bp | AATCAAGCCTTGGACATGAAGCAGCACCCCACTCTCCCCAACTTTCAGGTAAAGCGGTGTTGCTCGTGGTaGCGTGCGCCTTGCCCAGCT | + |
|
Preference number: 4 (lower is better) Translates to: NQALDMKQHPTLPNFQVKRCCSW*RAPCPA Trigger: AGCTGGGCAAGGCGCACGCCACCACGAGCAACACCG...CTTTACCTGAAAGTTGGGGAGAGTGGGGTGCTGCTTCATGTCCAAGGCTTGATT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000060792.6 |
||
| CDS-3UTR GCA 90 bp | ACAACCAGGGCATGGGTCATTCTTCCCATATCCTACCCAGACTGTGTCCAAATTATCTCCAGCAGCGTGTaGACGTCGGGGCTGCTCCCG | + |
|
Preference number: 4 (lower is better) Translates to: TTRAWVILPISYPDCVQIISSSV*TSGLLP Trigger: CGGGAGCAGCCCCGACGTGCACACGCTGCTGGAGAT...AATTTGGACACAGTCTGGGTAGGATATGGGAAGAATGACCCATGCCCTGGTTGT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000060792.6 |
||
| CDS-3UTR CCA 90 bp | CTAAAACTGACTTCCCTCCTGACCCGGAAGCTGCCCTGCTGTCTTGAGATCCTATCCTCCAGCTGGGCTTaGGTCAGCTGGATCTGGTCA | + |
|
Preference number: 4 (lower is better) Translates to: LKLTSLLTRKLPCCLEILSSSWA*VSWIWS Trigger: TGACCAGATCCAGCTGACCCAAGCCCAGCTGGAGGA...TAGGATCTCAAGACAGCAGGGCAGCTTCCGGGTCAGGAGGGAAGTCAGTTTTAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000060792.6 |
||
| CDS-3UTR CCA 90 bp | ACACTCTGCCTTTTACCTCACCCTATTGCCTTAGTTCCCCCAAAGACCCTCAGGTGTCGCTCCTCCAGCTaGGCTTGGGTCAGCTGGATC | + |
|
Preference number: 4 (lower is better) Translates to: TLCLLPHPIALVPPKTLRCRSSS*AWVSWI Trigger: GATCCAGCTGACCCAAGCCCAGCTGGAGGAGCGACA...CCTGAGGGTCTTTGGGGGAACTAAGGCAATAGGGTGAGGTAAAAGGCAGAGTGT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000060792.6 |
||
| CDS-3UTR CCA 90 bp | CTCAGGTCTTCCAGTGGGCCACCTCTGGGCAAAGGTCTCTCTACACACATTTTATTGCTCAGCTCTCCCTaGATGCTCTGCACAGCGCCC | + |
|
Preference number: 4 (lower is better) Translates to: LRSSSGPPLGKGLSTHILLLSSP*MLCTAP Trigger: GGGCGCTGTGCAGAGCATCCAGGGAGAGCTGAGCAA...TAAAATGTGTGTAGAGAGACCTTTGCCCAGAGGTGGCCCACTGGAAGACCTGAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000060792.6 |
||
| CDS-3UTR TCA 90 bp | TCAGTAACTATAAGAAATCAAGCCTTGGACATGAAGCAGCACCCCACTCTCCCCTCACCTGGTCCGACTTaGTCAGCTCGTCGGAGCCGG | + |
|
Preference number: 4 (lower is better) Translates to: SVTIRNQALDMKQHPTLPSPGPT*SARRSR Trigger: CCGGCTCCGACGAGCTGATCAAGTCGGACCAGGTGA...GGGGAGAGTGGGGTGCTGCTTCATGTCCAAGGCTTGATTTCTTATAGTTACTGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000060792.6 |
||
| CDS-3UTR GCA 90 bp | CCCGGAAGGCAGTTCCTAGATTCTGGAAGAGAGAATCCAATCAGGCTGACGTCTTGCCCAGCTTGTTCATaGGCTTCTCCAGCGTGTGCC | + |
|
Preference number: 4 (lower is better) Translates to: PGRQFLDSGRENPIRLTSCPACS*ASPACA Trigger: GGCACACGCTGGAGAAGCGCATGAACAAGCTGGGCA...AGACGTCAGCCTGATTGGATTCTCTCTTCCAGAATCTAGGAACTGCCTTCCGGG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000060792.6 |
||
| CDS-3UTR CCA 90 bp | CTAAAACTGACTTCCCTCCTGACCCGGAAGCTGCCCTGCTGTCTTGAGATCCTATGGGTCAGCTGGATCTaGTCAACGGCGCCGATGATT | + |
|
Preference number: 4 (lower is better) Translates to: LKLTSLLTRKLPCCLEILWVSWI*STAPMI Trigger: AATCATCGGCGCCGTTGACCAGATCCAGCTGACCCA...TAGGATCTCAAGACAGCAGGGCAGCTTCCGGGTCAGGAGGGAAGTCAGTTTTAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000060792.6 |
||
| CDS-3UTR CCA 90 bp | ACAACCAGGGCATGGGTCATTCTTCCCATATCCTACCCAGACTGTGTCCAAATTTCACGGTGTTGCTCGTaGTGGCGTGCGCCTTGCCCA | + |
|
Preference number: 4 (lower is better) Translates to: TTRAWVILPISYPDCVQISRCCS*WRAPCP Trigger: TGGGCAAGGCGCACGCCACCACGAGCAACACCGTGA...AATTTGGACACAGTCTGGGTAGGATATGGGAAGAATGACCCATGCCCTGGTTGT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000060792.6 |
||
| 3UTR CAA 72 bp | TCATTCTTCCCATATCCTACCCAGACTGTGTCCAAATaGAGGCTGTCGCTGGTGAGAGACCACCTCCCCTCG | + |
|
Preference number: 4 (lower is better) Translates to: SFFPYPTQTVSK*RLSLVRDHLPS Trigger: CGAGGGGAGGTGGTCTCTCACCAGCGACAGCCTCAATTTGGACACAGTCTGGGTAGGATATGGGAAGAATGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000060792.6 |
||
| CDS-3UTR GCA 90 bp | ACAACCAGGGCATGGGTCATTCTTCCCATATCCTACCCAGACTGTGTCCAAATTTCTCCCTGGATGCTCTaGACAGCGCCCTCCATCTCC | + |
|
Preference number: 4 (lower is better) Translates to: TTRAWVILPISYPDCVQISPWML*TAPSIS Trigger: GGAGATGGAGGGCGCTGTGCAGAGCATCCAGGGAGA...AATTTGGACACAGTCTGGGTAGGATATGGGAAGAATGACCCATGCCCTGGTTGT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000060792.6 |
||
| CDS-3UTR CCA 90 bp | ACAAGGCTTCCCGGAAGGCAGTTCCTAGATTCTGGAAGAGAGAATCCAATCAGGCGCGCATACACCACATaGTCGGGCGTGAAGGACTTG | + |
|
Preference number: 4 (lower is better) Translates to: TRLPGRQFLDSGRENPIRRAYTT*SGVKDL Trigger: CAAGTCCTTCACGCCCGACCATGTGGTGTATGCGCG...CCTGATTGGATTCTCTCTTCCAGAATCTAGGAACTGCCTTCCGGGAAGCCTTGT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000060792.6 |
||
| CDS-3UTR CCA 90 bp | CCCGGAAGGCAGTTCCTAGATTCTGGAAGAGAGAATCCAATCAGGCTGACGTCTTCTCCAGGTTCTCCTTaGTCTTCAGGCGCGTCTTCT | + |
|
Preference number: 4 (lower is better) Translates to: PGRQFLDSGRENPIRLTSSPGSP*SSGASS Trigger: AGAAGACGCGCCTGAAGACCAAGGAGAACCTGGAGA...AGACGTCAGCCTGATTGGATTCTCTCTTCCAGAATCTAGGAACTGCCTTCCGGG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000060792.6 |
||
| CDS-3UTR CCA 90 bp | AATCAAGCCTTGGACATGAAGCAGCACCCCACTCTCCCCAACTTTCAGGTAAAGCGGATCTTCTTGACGTaGAAGGTGAAAGGCGGCACC | + |
|
Preference number: 4 (lower is better) Translates to: NQALDMKQHPTLPNFQVKRIFLT*KVKGGT Trigger: GGTGCCGCCTTTCACCTTCCACGTCAAGAAGATCCG...CTTTACCTGAAAGTTGGGGAGAGTGGGGTGCTGCTTCATGTCCAAGGCTTGATT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000060792.6 |
||
| CDS-3UTR TCA 90 bp | AAGTTTCACATTAGAGAAAGATCCATGGTAGAAGCAGCTGAGAGGGAGTTAGGGTGGAGAAGGCCTTCTTaGAGTCGTCCACGCGCCGCA | + |
|
Preference number: 4 (lower is better) Translates to: KFHIRERSMVEAAERELGWRRPS*SRPRAA Trigger: TGCGGCGCGTGGACGACTTCAAGAAGGCCTTCTCCA...CCCTAACTCCCTCTCAGCTGCTTCTACCATGGATCTTTCTCTAATGTGAAACTT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000060792.6 |
||
| CDS-3UTR TCA 90 bp | TCAGTAACTATAAGAAATCAAGCCTTGGACATGAAGCAGCACCCCACTCTCCCCGTTTGGCCGGCAGCTTaGCTTCATCCTGGTAGATCA | + |
|
Preference number: 4 (lower is better) Translates to: SVTIRNQALDMKQHPTLPVWPAA*LHPGRS Trigger: TGATCTACCAGGATGAAGTCAAGCTGCCGGCCAAAC...GGGGAGAGTGGGGTGCTGCTTCATGTCCAAGGCTTGATTTCTTATAGTTACTGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000060792.6 |
||
| CDS-3UTR GCA 90 bp | ATTAAAGGGGGAACAAATGTGTCCTTAGGAGAAAACCTGGTCAGTAACTATAAGCGGGCACCAGGCGCGTaGCCAGCTTGTTCATGCGCT | + |
|
Preference number: 4 (lower is better) Translates to: IKGGTNVSLGENLVSNYKRAPGA*PACSCA Trigger: AGCGCATGAACAAGCTGGGCACGCGCCTGGTGCCCG...CTTATAGTTACTGACCAGGTTTTCTCCTAAGGACACATTTGTTCCCCCTTTAAT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000060792.6 |
||
| 3UTR CAA 72 bp | AAGGAAGTAGCCTGTAGCTATCAATTGGGGGAGGTGTaGCCTGCTCCTGATCAGCCATTAAAGGGGGAACAA | + |
|
Preference number: 4 (lower is better) Translates to: KEVACSYQLGEV*PAPDQPLKGEQ Trigger: TTGTTCCCCCTTTAATGGCTGATCAGGAGCAGGCAACACCTCCCCCAATTGATAGCTACAGGCTACTTCCTT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000060792.6 |
||
| 3UTR CAA 72 bp | CCACCACCTCTTATTTTGAAACTGCATCTGGCTAAATaGCTCATGCTGGCTTTGAGCTCACTCTGCAGCCCA | + |
|
Preference number: 4 (lower is better) Translates to: PPPLILKLHLAK*LMLALSSLCSP Trigger: TGGGCTGCAGAGTGAGCTCAAAGCCAGCATGAGCAATTTAGCCAGATGCAGTTTCAAAATAAGAGGTGGTGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000060792.6 |
||
| CDS-3UTR TCA 90 bp | ATTAAAGGGGGAACAAATGTGTCCTTAGGAGAAAACCTGGTCAGTAACTATAAGCTTTCAGCGACTTGCTaGCGCTCAGTTTGGCCGGCA | + |
|
Preference number: 4 (lower is better) Translates to: IKGGTNVSLGENLVSNYKLSATC*RSVWPA Trigger: TGCCGGCCAAACTGAGCGTCAGCAAGTCGCTGAAAG...CTTATAGTTACTGACCAGGTTTTCTCCTAAGGACACATTTGTTCCCCCTTTAAT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000060792.6 |
||
| CDS-3UTR GCA 90 bp | ATTAAAGGGGGAACAAATGTGTCCTTAGGAGAAAACCTGGTCAGTAACTATAAGCCAGGTTCTCACGCGTaGGCACCTTGGTCTTCTCCA | + |
|
Preference number: 4 (lower is better) Translates to: IKGGTNVSLGENLVSNYKPGSHA*APWSSP Trigger: TGGAGAAGACCAAGGTGCGCACGCGTGAGAACCTGG...CTTATAGTTACTGACCAGGTTTTCTCCTAAGGACACATTTGTTCCCCCTTTAAT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000060792.6 |
||
| CDS-3UTR GCA 90 bp | ATTAAAGGGGGAACAAATGTGTCCTTAGGAGAAAACCTGGTCAGTAACTATAAGCGCTTCTCCAGCGTGTaGCGTGTCTTCTCCAGGTTC | + |
|
Preference number: 4 (lower is better) Translates to: IKGGTNVSLGENLVSNYKRFSSV*RVFSRF Trigger: GAACCTGGAGAAGACACGGCACACGCTGGAGAAGCG...CTTATAGTTACTGACCAGGTTTTCTCCTAAGGACACATTTGTTCCCCCTTTAAT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000060792.6 |
||
| CDS-3UTR CCA 90 bp | ATTAAAGGGGGAACAAATGTGTCCTTAGGAGAAAACCTGGTCAGTAACTATAAGTCCAGTTTCTTTATCTaGCCGGCCTGGCGCTCCAGG | + |
|
Preference number: 4 (lower is better) Translates to: IKGGTNVSLGENLVSNYKSSFFI*PAWRSR Trigger: CCTGGAGCGCCAGGCCGGCCAGATAAAGAAACTGGA...CTTATAGTTACTGACCAGGTTTTCTCCTAAGGACACATTTGTTCCCCCTTTAAT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000060792.6 |
||
| 3UTR CAA 72 bp | GATCCTACCAAAGTGGGACTCTTGAATTTCTTTGTGTaGTTAACAAGGGCATTTCTTTCTAATTCCATTTCA | + |
|
Preference number: 4 (lower is better) Translates to: DPTKVGLLNFFV*LTRAFLSNSIS Trigger: TGAAATGGAATTAGAAAGAAATGCCCTTGTTAACAACACAAAGAAATTCAAGAGTCCCACTTTGGTAGGATC 36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000060792.6 |
||
| CDS CCA 90 bp | CCAGCAGCGTGTGCACGTCGGGGCTGCTCCCGCGCAGCAGGTCAGTaGCCTCGCCGCGCTCCGCGCCAACCTCGTCGTCCTCGGGACCCA | + |
|
Preference number: 5 (lower is better) Translates to: PAACARRGCSRAAGQ*PRRAPRQPRRPRDP Trigger: TGGGTCCCGAGGACGACGAGGTTGGCGCGGAGCGCGGCGAGGCCACTGACCTGCTGCGCGGGAGCAGCCCCGACGTGCACACGCTGCTGG 74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000060792.6 |
||
| CDS GCA 90 bp | TCCACCAGGACGGCGTCCGACTCCTCGGTGATCTCCAGCAGCGTGTaGACGTCGGGGCTGCTCCCGCGCAGCAGGTCAGTGGCCTCGCCG | + |
|
Preference number: 5 (lower is better) Translates to: STRTASDSSVISSSV*TSGLLPRSRSVASP Trigger: CGGCGAGGCCACTGACCTGCTGCGCGGGAGCAGCCCCGACGTGCACACGCTGCTGGAGATCACCGAGGAGTCGGACGCCGTCCTGGTGGA 71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000060792.6 |
||
| CDS GCA 90 bp | GTGGCGTGCGCCTTGCCCAGCTTGCTCAGCTCTCCCTGGATGCTCTaGACAGCGCCCTCCATCTCCGCCTGTCGCTCCTCCAGCTGGGCT | + |
|
Preference number: 5 (lower is better) Translates to: VACALPSLLSSPWML*TAPSISACRSSSWA Trigger: AGCCCAGCTGGAGGAGCGACAGGCGGAGATGGAGGGCGCTGTGCAGAGCATCCAGGGAGAGCTGAGCAAGCTGGGCAAGGCGCACGCCAC 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000060792.6 |
||
| CDS GCA 90 bp | TCGTGGTGGCGTGCGCCTTGCCCAGCTTGCTCAGCTCTCCCTGGATaGTCTGCACAGCGCCCTCCATCTCCGCCTGTCGCTCCTCCAGCT | + |
|
Preference number: 5 (lower is better) Translates to: SWWRAPCPACSALPG*SAQRPPSPPVAPPA Trigger: AGCTGGAGGAGCGACAGGCGGAGATGGAGGGCGCTGTGCAGAGCATCCAGGGAGAGCTGAGCAAGCTGGGCAAGGCGCACGCCACCACGA 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000060792.6 |
||
| CDS CCA 90 bp | TTGCTCGTGGTGGCGTGCGCCTTGCCCAGCTTGCTCAGCTCTCCCTaGATGCTCTGCACAGCGCCCTCCATCTCCGCCTGTCGCTCCTCC | + |
|
Preference number: 5 (lower is better) Translates to: LLVVACALPSLLSSP*MLCTAPSISACRSS Trigger: GGAGGAGCGACAGGCGGAGATGGAGGGCGCTGTGCAGAGCATCCAGGGAGAGCTGAGCAAGCTGGGCAAGGCGCACGCCACCACGAGCAA 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000060792.6 |
||
| CDS CCA 90 bp | CGGCGCCTCAGCAGCTCCGCCTCGTTGACCTCCAGTTTCTTTATCTaGCCGGCCTGGCGCTCCAGGCTGCCGCGCACGGTCTTCACGTTG | + |
|
Preference number: 5 (lower is better) Translates to: RRLSSSASLTSSFFI*PAWRSRLPRTVFTL Trigger: CAACGTGAAGACCGTGCGCGGCAGCCTGGAGCGCCAGGCCGGCCAGATAAAGAAACTGGAGGTCAACGAGGCGGAGCTGCTGAGGCGCCG 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000060792.6 |
||
| CDS GCA 90 bp | ACTTGCTCACGGTGTTGCTCGTGGTGGCGTGCGCCTTGCCCAGCTTaGTCAGCTCTCCCTGGATGCTCTGCACAGCGCCCTCCATCTCCG | + |
|
Preference number: 5 (lower is better) Translates to: TCSRCCSWWRAPCPA*SALPGCSAQRPPSP Trigger: CGGAGATGGAGGGCGCTGTGCAGAGCATCCAGGGAGAGCTGAGCAAGCTGGGCAAGGCGCACGCCACCACGAGCAACACCGTGAGCAAGT 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000060792.6 |
||
| CDS CCA 90 bp | AGCAGCTCCGCCTCGTTGACCTCCAGTTTCTTTATCTGGCCGGCCTaGCGCTCCAGGCTGCCGCGCACGGTCTTCACGTTGACGCTGACC | + |
|
Preference number: 5 (lower is better) Translates to: SSSASLTSSFFIWPA*RSRLPRTVFTLTLT Trigger: GGTCAGCGTCAACGTGAAGACCGTGCGCGGCAGCCTGGAGCGCCAGGCCGGCCAGATAAAGAAACTGGAGGTCAACGAGGCGGAGCTGCT 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000060792.6 |
||
| CDS CCA 90 bp | CCGATGATTTTATCCAGAAGGCTCAGCACCAGCACACCGTTCACCTaGTCCGACTTGATCAGCTCGTCGGAGCCGGTCCCCGACGGCTCC | + |
|
Preference number: 5 (lower is better) Translates to: PMILSRRLSTSTPFT*SDLISSSEPVPDGS Trigger: GGAGCCGTCGGGGACCGGCTCCGACGAGCTGATCAAGTCGGACCAGGTGAACGGTGTGCTGGTGCTGAGCCTTCTGGATAAAATCATCGG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000060792.6 |
||
| CDS CCA 90 bp | TGCACAGCGCCCTCCATCTCCGCCTGTCGCTCCTCCAGCTGGGCTTaGGTCAGCTGGATCTGGTCAACGGCGCCGATGATTTTATCCAGA | + |
|
Preference number: 5 (lower is better) Translates to: CTAPSISACRSSSWA*VSWIWSTAPMILSR Trigger: TCTGGATAAAATCATCGGCGCCGTTGACCAGATCCAGCTGACCCAAGCCCAGCTGGAGGAGCGACAGGCGGAGATGGAGGGCGCTGTGCA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000060792.6 |
||
| CDS CCA 90 bp | ATGCTCTGCACAGCGCCCTCCATCTCCGCCTGTCGCTCCTCCAGCTaGGCTTGGGTCAGCTGGATCTGGTCAACGGCGCCGATGATTTTA | + |
|
Preference number: 5 (lower is better) Translates to: MLCTAPSISACRSSS*AWVSWIWSTAPMIL Trigger: TAAAATCATCGGCGCCGTTGACCAGATCCAGCTGACCCAAGCCCAGCTGGAGGAGCGACAGGCGGAGATGGAGGGCGCTGTGCAGAGCAT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000060792.6 |
||
| CDS-3UTR CAA 90 bp | AGCTTCCAGCTAGGGAGCTCAGCTCCAGAGGCACCTTGCTTTCCCCAGCTGCCATTCACCTGGTCCGACTaGATCAGCTCGTCGGAGCCG | + |
|
Preference number: 5 (lower is better) Translates to: SFQLGSSAPEAPCFPQLPFTWSD*ISSSEP Trigger: CGGCTCCGACGAGCTGATCAAGTCGGACCAGGTGAA...TGGCAGCTGGGGAAAGCAAGGTGCCTCTGGAGCTGAGCTCCCTAGCTGGAAGCT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000060792.6 |
||
| CDS CCA 90 bp | ATCTCCGCCTGTCGCTCCTCCAGCTGGGCTTGGGTCAGCTGGATCTaGTCAACGGCGCCGATGATTTTATCCAGAAGGCTCAGCACCAGC | + |
|
Preference number: 5 (lower is better) Translates to: ISACRSSSWAWVSWI*STAPMILSRRLSTS Trigger: GCTGGTGCTGAGCCTTCTGGATAAAATCATCGGCGCCGTTGACCAGATCCAGCTGACCCAAGCCCAGCTGGAGGAGCGACAGGCGGAGAT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000060792.6 |
||
| CDS-3UTR CAA 90 bp | AACACAGCAACTCAAGGGACTCCCCTAGAGCCCACAGGAAACTGCATCTGCCCAGTGGTGGCGTGCGCCTaGCCCAGCTTGCTCAGCTCT | + |
|
Preference number: 5 (lower is better) Translates to: NTATQGTPLEPTGNCICPVVACA*PSLLSS Trigger: AGAGCTGAGCAAGCTGGGCAAGGCGCACGCCACCAC...TGGGCAGATGCAGTTTCCTGTGGGCTCTAGGGGAGTCCCTTGAGTTGCTGTGTT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000060792.6 |
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| CDS-3UTR CAA 90 bp | AGCTTCCAGCTAGGGAGCTCAGCTCCAGAGGCACCTTGCTTTCCCCAGCTGCCAACGTTGACGCTGACCTaGCGCACCTTCTCCAGCAAC | + |
|
Preference number: 5 (lower is better) Translates to: SFQLGSSAPEAPCFPQLPTLTLT*RTFSSN Trigger: GTTGCTGGAGAAGGTGCGCAAGGTCAGCGTCAACGT...TGGCAGCTGGGGAAAGCAAGGTGCCTCTGGAGCTGAGCTCCCTAGCTGGAAGCT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000060792.6 |
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| CDS TCA 90 bp | CCTCCAGCTGGGCTTGGGTCAGCTGGATCTGGTCAACGGCGCCGATaGTTTTATCCAGAAGGCTCAGCACCAGCACACCGTTCACCTGGT | + |
|
Preference number: 5 (lower is better) Translates to: PPAGLGSAGSGQRRR*FYPEGSAPAHRSPG Trigger: ACCAGGTGAACGGTGTGCTGGTGCTGAGCCTTCTGGATAAAATCATCGGCGCCGTTGACCAGATCCAGCTGACCCAAGCCCAGCTGGAGG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000060792.6 |
||
| CDS TCA 90 bp | TGTAGACAGCGGTCTTGGAGCGCGCATACACCACATGGTCGGGCGTaGAGGACTTGCGCAGCTTGTCCCGGGATGTCTTCAGCTTCTCTC | + |
|
Preference number: 5 (lower is better) Translates to: CRQRSWSAHTPHGRA*RTCAACPGMSSASL Trigger: GAGAGAAGCTGAAGACATCCCGGGACAAGCTGCGCAAGTCCTTCACGCCCGACCATGTGGTGTATGCGCGCTCCAAGACCGCTGTCTACA 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000060792.6 |
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| CDS-3UTR CAA 90 bp | TTTCACATTAGAGAAAGATCCATGGTAGAAGCAGCTGAGAGGGAGTTAGGGTGGCGCAGGCCGCTGCGCTaGATGCGCTCGGCGCGGGAC | + |
|
Preference number: 5 (lower is better) Translates to: FHIRERSMVEAAERELGWRRPLR*MRSARD Trigger: GTCCCGCGCCGAGCGCATCAAGCGCAGCGGCCTGCG...CCACCCTAACTCCCTCTCAGCTGCTTCTACCATGGATCTTTCTCTAATGTGAAA 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000060792.6 |
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| CDS-3UTR CAA 90 bp | CACTTACCCACCCTCCTCAGCTTCTCCGTCTCCAAGCATTCAGAGGAGGGAAGGCCCTCGCGGATCTTCTaGACGTGGAAGGTGAAAGGC | + |
|
Preference number: 5 (lower is better) Translates to: HLPTLLSFSVSKHSEEGRPSRIF*TWKVKG Trigger: GCCTTTCACCTTCCACGTCAAGAAGATCCGCGAGGG...CCTTCCCTCCTCTGAATGCTTGGAGACGGAGAAGCTGAGGAGGGTGGGTAAGTG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000060792.6 |
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| CDS-3UTR CAA 90 bp | CACTTACCCACCCTCCTCAGCTTCTCCGTCTCCAAGCATTCAGAGGAGGGAAGGTTCTCCAGGTTCTCCTaGGTCTTCAGGCGCGTCTTC | + |
|
Preference number: 5 (lower is better) Translates to: HLPTLLSFSVSKHSEEGRFSRFS*VFRRVF Trigger: GAAGACGCGCCTGAAGACCAAGGAGAACCTGGAGAA...CCTTCCCTCCTCTGAATGCTTGGAGACGGAGAAGCTGAGGAGGGTGGGTAAGTG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000060792.6 |
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| CDS-3UTR CAA 90 bp | AACACAGCAACTCAAGGGACTCCCCTAGAGCCCACAGGAAACTGCATCTGCCCATTGCTGACGCTCAGTTaGGCCGGCAGCTTGACTTCA | + |
|
Preference number: 5 (lower is better) Translates to: NTATQGTPLEPTGNCICPLLTLS*AGSLTS Trigger: TGAAGTCAAGCTGCCGGCCAAACTGAGCGTCAGCAA...TGGGCAGATGCAGTTTCCTGTGGGCTCTAGGGGAGTCCCTTGAGTTGCTGTGTT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000060792.6 |
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| CDS-3UTR CAA 90 bp | TCTCTTTGGAACACACTTTCTAAAACTGACTTCCCTCCTGACCCGGAAGCTGCCTCGGGCGTGAAGGACTaGCGCAGCTTGTCCCGGGAT | + |
|
Preference number: 5 (lower is better) Translates to: SLWNTLSKTDFPPDPEAASGVKD*RSLSRD Trigger: ATCCCGGGACAAGCTGCGCAAGTCCTTCACGCCCGA...GGCAGCTTCCGGGTCAGGAGGGAAGTCAGTTTTAGAAAGTGTGTTCCAAAGAGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000060792.6 |
||
| CDS-3UTR CAA 90 bp | GTGGGCCACCTCTGGGCAAAGGTCTCTCTACACACATTTTATCTTCGTGGAATTAACTTGCTCACGGTGTaGCTCGTGGTGGCGTGCGCC | + |
|
Preference number: 5 (lower is better) Translates to: VGHLWAKVSLHTFYLRGINLLTV*LVVACA Trigger: GGCGCACGCCACCACGAGCAACACCGTGAGCAAGTT...AATTCCACGAAGATAAAATGTGTGTAGAGAGACCTTTGCCCAGAGGTGGCCCAC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000060792.6 |
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| CDS-3UTR CAA 90 bp | ACAACCAGGGCATGGGTCATTCTTCCCATATCCTACCCAGACTGTGTCCAAATTCGCACGGTCTTCACGTaGACGCTGACCTTGCGCACC | + |
|
Preference number: 5 (lower is better) Translates to: TTRAWVILPISYPDCVQIRTVFT*TLTLRT Trigger: GGTGCGCAAGGTCAGCGTCAACGTGAAGACCGTGCG...AATTTGGACACAGTCTGGGTAGGATATGGGAAGAATGACCCATGCCCTGGTTGT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000060792.6 |
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| CDS-3UTR CAA 90 bp | ACAAGGCTTCCCGGAAGGCAGTTCCTAGATTCTGGAAGAGAGAATCCAATCAGGTTGGAGAAGGCCTTCTaGAAGTCGTCCACGCGCCGC | + |
|
Preference number: 5 (lower is better) Translates to: TRLPGRQFLDSGRENPIRLEKAF*KSSTRR Trigger: GCGGCGCGTGGACGACTTCAAGAAGGCCTTCTCCAA...CCTGATTGGATTCTCTCTTCCAGAATCTAGGAACTGCCTTCCGGGAAGCCTTGT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000060792.6 |
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| CDS-3UTR CAA 90 bp | ACAACCAGGGCATGGGTCATTCTTCCCATATCCTACCCAGACTGTGTCCAAATTTCACGCGTGCGCACCTaGGTCTTCTCCATCTTCTCC | + |
|
Preference number: 5 (lower is better) Translates to: TTRAWVILPISYPDCVQISRVRT*VFSIFS Trigger: GGAGAAGATGGAGAAGACCAAGGTGCGCACGCGTGA...AATTTGGACACAGTCTGGGTAGGATATGGGAAGAATGACCCATGCCCTGGTTGT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000060792.6 |
||
| CDS-3UTR CAA 90 bp | AAGTTTCACATTAGAGAAAGATCCATGGTAGAAGCAGCTGAGAGGGAGTTAGGGAGGCGCGTGCCCAGCTaGTTCATGCGCTTCTCCAGC | + |
|
Preference number: 5 (lower is better) Translates to: KFHIRERSMVEAAERELGRRVPS*FMRFSS Trigger: GCTGGAGAAGCGCATGAACAAGCTGGGCACGCGCCT...CCCTAACTCCCTCTCAGCTGCTTCTACCATGGATCTTTCTCTAATGTGAAACTT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000060792.6 |
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| CDS-3UTR CAA 90 bp | TTTCACATTAGAGAAAGATCCATGGTAGAAGCAGCTGAGAGGGAGTTAGGGTGGATCATGACTTTGAAGTaGCGGCGCCTCAGCAGCTCC | + |
|
Preference number: 5 (lower is better) Translates to: FHIRERSMVEAAERELGWIMTLK*RRLSSS Trigger: GGAGCTGCTGAGGCGCCGCAACTTCAAAGTCATGAT...CCACCCTAACTCCCTCTCAGCTGCTTCTACCATGGATCTTTCTCTAATGTGAAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000060792.6 |
||
| CDS-3UTR CAA 90 bp | ACACTCTGCCTTTTACCTCACCCTATTGCCTTAGTTCCCCCAAAGACCCTCAGGTTCTCCATCTTCTCCTaGGAGAAGGCCTTCTTGAAG | + |
|
Preference number: 5 (lower is better) Translates to: TLCLLPHPIALVPPKTLRFSIFS*EKAFLK Trigger: CTTCAAGAAGGCCTTCTCCAAGGAGAAGATGGAGAA...CCTGAGGGTCTTTGGGGGAACTAAGGCAATAGGGTGAGGTAAAAGGCAGAGTGT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000060792.6 |
||
| CDS-3UTR CAA 90 bp | ATTAAAGGGGGAACAAATGTGTCCTTAGGAGAAAACCTGGTCAGTAACTATAAGGACTCTTTCAGCGACTaGCTGACGCTCAGTTTGGCC | + |
|
Preference number: 5 (lower is better) Translates to: IKGGTNVSLGENLVSNYKDSFSD*LTLSLA Trigger: GGCCAAACTGAGCGTCAGCAAGTCGCTGAAAGAGTC...CTTATAGTTACTGACCAGGTTTTCTCCTAAGGACACATTTGTTCCCCCTTTAAT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000060792.6 |
||
| CDS CCA 72 bp | TGTGCACGTCGGGGCTGCTCCCGCGCAGCAGGTCAGTaGCCTCGCCGCGCTCCGCGCCAACCTCGTCGTCCT | + |
|
Preference number: 6 (lower is better) Translates to: CARRGCSRAAGQ*PRRAPRQPRRP Trigger: AGGACGACGAGGTTGGCGCGGAGCGCGGCGAGGCCACTGACCTGCTGCGCGGGAGCAGCCCCGACGTGCACA 74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000060792.6 |
||
| CDS CCA 72 bp | CCGACGGCTCCTCCGTGGCCCGCGCCTCCCCTTGGGTaGGCTCCGGGCCCTCTGAGGAAGCATCGGGAAATC | + |
|
Preference number: 6 (lower is better) Translates to: PTAPPWPAPPLG*APGPLRKHREI Trigger: GATTTCCCGATGCTTCCTCAGAGGGCCCGGAGCCCACCCAAGGGGAGGCGCGGGCCACGGAGGAGCCGTCGG 72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000060792.6 |
||
| CDS GCA 72 bp | ACGGCGTCCGACTCCTCGGTGATCTCCAGCAGCGTGTaGACGTCGGGGCTGCTCCCGCGCAGCAGGTCAGTG | + |
|
Preference number: 6 (lower is better) Translates to: TASDSSVISSSV*TSGLLPRSRSV Trigger: CACTGACCTGCTGCGCGGGAGCAGCCCCGACGTGCACACGCTGCTGGAGATCACCGAGGAGTCGGACGCCGT 69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000060792.6 |
||
| CDS CAA 90 bp | GAGAAGGCCTTCTTGAAGTCGTCCACGCGCCGCAGGCCGCTGCGCTaGATGCGCTCGGCGCGGGACTCCTCGATCACCTCCTCCACCTCC | + |
|
Preference number: 6 (lower is better) Translates to: EKAFLKSSTRRRPLR*MRSARDSSITSSTS Trigger: GGAGGTGGAGGAGGTGATCGAGGAGTCCCGCGCCGAGCGCATCAAGCGCAGCGGCCTGCGGCGCGTGGACGACTTCAAGAAGGCCTTCTC 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000060792.6 |
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| CDS TCA 72 bp | CGCTCTTGTCCACCAGGACGGCGTCCGACTCCTCGGTaGTCTCCAGCAGCGTGTGCACGTCGGGGCTGCTCC | + |
|
Preference number: 6 (lower is better) Translates to: RSCPPGRRPTPR*SPAACARRGCS Trigger: GGAGCAGCCCCGACGTGCACACGCTGCTGGAGATCACCGAGGAGTCGGACGCCGTCCTGGTGGACAAGAGCG 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000060792.6 |
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| CDS CAA 72 bp | TTCTTGAAGTCGTCCACGCGCCGCAGGCCGCTGCGCTaGATGCGCTCGGCGCGGGACTCCTCGATCACCTCC | + |
|
Preference number: 6 (lower is better) Translates to: FLKSSTRRRPLR*MRSARDSSITS Trigger: GGAGGTGATCGAGGAGTCCCGCGCCGAGCGCATCAAGCGCAGCGGCCTGCGGCGCGTGGACGACTTCAAGAA 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000060792.6 |
||
| CDS GCA 72 bp | GCCTTGCCCAGCTTGCTCAGCTCTCCCTGGATGCTCTaGACAGCGCCCTCCATCTCCGCCTGTCGCTCCTCC | + |
|
Preference number: 6 (lower is better) Translates to: ALPSLLSSPWML*TAPSISACRSS Trigger: GGAGGAGCGACAGGCGGAGATGGAGGGCGCTGTGCAGAGCATCCAGGGAGAGCTGAGCAAGCTGGGCAAGGC 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000060792.6 |
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| CDS CCA 72 bp | AGCAGCTCCGCCTCGTTGACCTCCAGTTTCTTTATCTaGCCGGCCTGGCGCTCCAGGCTGCCGCGCACGGTC | + |
|
Preference number: 6 (lower is better) Translates to: SSSASLTSSFFI*PAWRSRLPRTV Trigger: GACCGTGCGCGGCAGCCTGGAGCGCCAGGCCGGCCAGATAAAGAAACTGGAGGTCAACGAGGCGGAGCTGCT 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000060792.6 |
||
| CDS GCA 72 bp | TCAGCTTCTCTCGTCGCTCCACGGGCACCAGGCGCGTaGCCAGCTTGTTCATGCGCTTCTCCAGCGTGTGCC | + |
|
Preference number: 6 (lower is better) Translates to: SASLVAPRAPGA*PACSCASPACA Trigger: GGCACACGCTGGAGAAGCGCATGAACAAGCTGGGCACGCGCCTGGTGCCCGTGGAGCGACGAGAGAAGCTGA 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000060792.6 |
||
| CDS CAA 72 bp | TCTCGTCGCTCCACGGGCACCAGGCGCGTGCCCAGCTaGTTCATGCGCTTCTCCAGCGTGTGCCGTGTCTTC | + |
|
Preference number: 6 (lower is better) Translates to: SRRSTGTRRVPS*FMRFSSVCRVF Trigger: GAAGACACGGCACACGCTGGAGAAGCGCATGAACAAGCTGGGCACGCGCCTGGTGCCCGTGGAGCGACGAGA 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000060792.6 |
||
| CDS CAA 90 bp | TTATCCAGAAGGCTCAGCACCAGCACACCGTTCACCTGGTCCGACTaGATCAGCTCGTCGGAGCCGGTCCCCGACGGCTCCTCCGTGGCC | + |
|
Preference number: 6 (lower is better) Translates to: LSRRLSTSTPFTWSD*ISSSEPVPDGSSVA Trigger: GGCCACGGAGGAGCCGTCGGGGACCGGCTCCGACGAGCTGATCAAGTCGGACCAGGTGAACGGTGTGCTGGTGCTGAGCCTTCTGGATAA 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000060792.6 |
||
| CDS GCA 72 bp | GCCCTCGCCCAGCTCGTCACCCTCCTTCTCAGGCAGTaGCTCCGACTCTTTCAGCGACTTGCTGACGCTCAG | + |
|
Preference number: 6 (lower is better) Translates to: ALAQLVTLLLRQ*LRLFQRLADAQ Trigger: CTGAGCGTCAGCAAGTCGCTGAAAGAGTCGGAGGCACTGCCTGAGAAGGAGGGTGACGAGCTGGGCGAGGGC 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000060792.6 |
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| CDS CAA 90 bp | AACTTGCTCACGGTGTTGCTCGTGGTGGCGTGCGCCTTGCCCAGCTaGCTCAGCTCTCCCTGGATGCTCTGCACAGCGCCCTCCATCTCC | + |
|
Preference number: 6 (lower is better) Translates to: NLLTVLLVVACALPS*LSSPWMLCTAPSIS Trigger: GGAGATGGAGGGCGCTGTGCAGAGCATCCAGGGAGAGCTGAGCAAGCTGGGCAAGGCGCACGCCACCACGAGCAACACCGTGAGCAAGTT 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000060792.6 |
||
| CDS CAA 90 bp | TTCTCCAGCAACTTGCTCACGGTGTTGCTCGTGGTGGCGTGCGCCTaGCCCAGCTTGCTCAGCTCTCCCTGGATGCTCTGCACAGCGCCC | + |
|
Preference number: 6 (lower is better) Translates to: FSSNLLTVLLVVACA*PSLLSSPWMLCTAP Trigger: GGGCGCTGTGCAGAGCATCCAGGGAGAGCTGAGCAAGCTGGGCAAGGCGCACGCCACCACGAGCAACACCGTGAGCAAGTTGCTGGAGAA 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000060792.6 |
||
| CDS CAA 90 bp | GAGCGCGCATACACCACATGGTCGGGCGTGAAGGACTTGCGCAGCTaGTCCCGGGATGTCTTCAGCTTCTCTCGTCGCTCCACGGGCACC | + |
|
Preference number: 6 (lower is better) Translates to: ERAYTTWSGVKDLRS*SRDVFSFSRRSTGT Trigger: GGTGCCCGTGGAGCGACGAGAGAAGCTGAAGACATCCCGGGACAAGCTGCGCAAGTCCTTCACGCCCGACCATGTGGTGTATGCGCGCTC 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000060792.6 |
||
| CDS CAA 90 bp | GCGGTCTTGGAGCGCGCATACACCACATGGTCGGGCGTGAAGGACTaGCGCAGCTTGTCCCGGGATGTCTTCAGCTTCTCTCGTCGCTCC | + |
|
Preference number: 6 (lower is better) Translates to: AVLERAYTTWSGVKD*RSLSRDVFSFSRRS Trigger: GGAGCGACGAGAGAAGCTGAAGACATCCCGGGACAAGCTGCGCAAGTCCTTCACGCCCGACCATGTGGTGTATGCGCGCTCCAAGACCGC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000060792.6 |
||
| CDS GCA 72 bp | TCCAGCAACTTGCTCACGGTGTTGCTCGTGGTGGCGTaGGCCTTGCCCAGCTTGCTCAGCTCTCCCTGGATG | + |
|
Preference number: 6 (lower is better) Translates to: SSNLLTVLLVVA*ALPSLLSSPWM Trigger: CATCCAGGGAGAGCTGAGCAAGCTGGGCAAGGCGCACGCCACCACGAGCAACACCGTGAGCAAGTTGCTGGA 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000060792.6 |
||
| CDS CAA 72 bp | AACTTGCTCACGGTGTTGCTCGTGGTGGCGTGCGCCTaGCCCAGCTTGCTCAGCTCTCCCTGGATGCTCTGC | + |
|
Preference number: 6 (lower is better) Translates to: NLLTVLLVVACA*PSLLSSPWMLC Trigger: GCAGAGCATCCAGGGAGAGCTGAGCAAGCTGGGCAAGGCGCACGCCACCACGAGCAACACCGTGAGCAAGTT 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000060792.6 |
||
| CDS CAA 90 bp | TCCAGGTTCTCACGCGTGCGCACCTTGGTCTTCTCCATCTTCTCCTaGGAGAAGGCCTTCTTGAAGTCGTCCACGCGCCGCAGGCCGCTG | + |
|
Preference number: 6 (lower is better) Translates to: SRFSRVRTLVFSIFS*EKAFLKSSTRRRPL Trigger: CAGCGGCCTGCGGCGCGTGGACGACTTCAAGAAGGCCTTCTCCAAGGAGAAGATGGAGAAGACCAAGGTGCGCACGCGTGAGAACCTGGA 61% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000060792.6 |
||
| CDS TCA 72 bp | CGGTCTTGGAGCGCGCATACACCACATGGTCGGGCGTaGAGGACTTGCGCAGCTTGTCCCGGGATGTCTTCA | + |
|
Preference number: 6 (lower is better) Translates to: RSWSAHTPHGRA*RTCAACPGMSS Trigger: TGAAGACATCCCGGGACAAGCTGCGCAAGTCCTTCACGCCCGACCATGTGGTGTATGCGCGCTCCAAGACCG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000060792.6 |
||
| CDS CCA 72 bp | TTATCCAGAAGGCTCAGCACCAGCACACCGTTCACCTaGTCCGACTTGATCAGCTCGTCGGAGCCGGTCCCC | + |
|
Preference number: 6 (lower is better) Translates to: LSRRLSTSTPFT*SDLISSSEPVP Trigger: GGGGACCGGCTCCGACGAGCTGATCAAGTCGGACCAGGTGAACGGTGTGCTGGTGCTGAGCCTTCTGGATAA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000060792.6 |
||
| CDS CAA 72 bp | ACTTTGAAGTTGCGGCGCCTCAGCAGCTCCGCCTCGTaGACCTCCAGTTTCTTTATCTGGCCGGCCTGGCGC | + |
|
Preference number: 6 (lower is better) Translates to: TLKLRRLSSSAS*TSSFFIWPAWR Trigger: GCGCCAGGCCGGCCAGATAAAGAAACTGGAGGTCAACGAGGCGGAGCTGCTGAGGCGCCGCAACTTCAAAGT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000060792.6 |
||
| CDS CAA 72 bp | TCACGCGTGCGCACCTTGGTCTTCTCCATCTTCTCCTaGGAGAAGGCCTTCTTGAAGTCGTCCACGCGCCGC | + |
|
Preference number: 6 (lower is better) Translates to: SRVRTLVFSIFS*EKAFLKSSTRR Trigger: GCGGCGCGTGGACGACTTCAAGAAGGCCTTCTCCAAGGAGAAGATGGAGAAGACCAAGGTGCGCACGCGTGA 60% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000060792.6 |
||
| CDS CAA 72 bp | TACACCACATGGTCGGGCGTGAAGGACTTGCGCAGCTaGTCCCGGGATGTCTTCAGCTTCTCTCGTCGCTCC | + |
|
Preference number: 6 (lower is better) Translates to: YTTWSGVKDLRS*SRDVFSFSRRS Trigger: GGAGCGACGAGAGAAGCTGAAGACATCCCGGGACAAGCTGCGCAAGTCCTTCACGCCCGACCATGTGGTGTA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000060792.6 |
||
| CDS CAA 72 bp | GAGCGCGCATACACCACATGGTCGGGCGTGAAGGACTaGCGCAGCTTGTCCCGGGATGTCTTCAGCTTCTCT | + |
|
Preference number: 6 (lower is better) Translates to: ERAYTTWSGVKD*RSLSRDVFSFS Trigger: AGAGAAGCTGAAGACATCCCGGGACAAGCTGCGCAAGTCCTTCACGCCCGACCATGTGGTGTATGCGCGCTC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000060792.6 |
||
| CDS TCA 72 bp | GGGCTTGGGTCAGCTGGATCTGGTCAACGGCGCCGATaGTTTTATCCAGAAGGCTCAGCACCAGCACACCGT | + |
|
Preference number: 6 (lower is better) Translates to: GLGSAGSGQRRR*FYPEGSAPAHR Trigger: ACGGTGTGCTGGTGCTGAGCCTTCTGGATAAAATCATCGGCGCCGTTGACCAGATCCAGCTGACCCAAGCCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000060792.6 |
||
| CDS CCA 72 bp | TGTCGCTCCTCCAGCTGGGCTTGGGTCAGCTGGATCTaGTCAACGGCGCCGATGATTTTATCCAGAAGGCTC | + |
|
Preference number: 6 (lower is better) Translates to: CRSSSWAWVSWI*STAPMILSRRL Trigger: GAGCCTTCTGGATAAAATCATCGGCGCCGTTGACCAGATCCAGCTGACCCAAGCCCAGCTGGAGGAGCGACA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000060792.6 |
||
| CDS CAA 72 bp | TTCTCCAGCGTGTGCCGTGTCTTCTCCAGGTTCTCCTaGGTCTTCAGGCGCGTCTTCTCCAGGTTCTCACGC | + |
|
Preference number: 6 (lower is better) Translates to: FSSVCRVFSRFS*VFRRVFSRFSR Trigger: GCGTGAGAACCTGGAGAAGACGCGCCTGAAGACCAAGGAGAACCTGGAGAAGACACGGCACACGCTGGAGAA 58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000060792.6 |
||
| CDS CAA 72 bp | TCCTTCTCAGGCAGTGCCTCCGACTCTTTCAGCGACTaGCTGACGCTCAGTTTGGCCGGCAGCTTGACTTCA | + |
|
Preference number: 6 (lower is better) Translates to: SFSGSASDSFSD*LTLSLAGSLTS Trigger: TGAAGTCAAGCTGCCGGCCAAACTGAGCGTCAGCAAGTCGCTGAAAGAGTCGGAGGCACTGCCTGAGAAGGA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000060792.6 |
||
| CDS CAA 90 bp | TTGGTCTTCAGGCGCGTCTTCTCCAGGTTCTCACGCGTGCGCACCTaGGTCTTCTCCATCTTCTCCTTGGAGAAGGCCTTCTTGAAGTCG | + |
|
Preference number: 6 (lower is better) Translates to: LVFRRVFSRFSRVRT*VFSIFSLEKAFLKS Trigger: CGACTTCAAGAAGGCCTTCTCCAAGGAGAAGATGGAGAAGACCAAGGTGCGCACGCGTGAGAACCTGGAGAAGACGCGCCTGAAGACCAA 56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000060792.6 |
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