Pregenerated sensors for CAV1 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000007655Ensembl transcript IDs: ENSMUST00000007799.13, ENSMUST00000115453.2, ENSMUST00000115454.2, ENSMUST00000115455.3, ENSMUST00000115456.6, ENSMUST00000150901.2, ENSMUST00000177234.2
Found 146 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | AATAGACACGCTGGCCTCATTCAGTTGCTGAGTGGCAGGGAAAGCTaGCTTCTACTTCTGCCAGTCCAGAGAGGTCTCACCCCCATTTGT | + |
|
Preference number: 1 (lower is better) Translates to: NRHAGLIQLLSGRES*LLLLPVQRGLTPIC Trigger: ACAAATGGGGGTGAGACCTCTCTGGACTGGCAGAAGTAGAAGCCAGCTTTCCCTGCCACTCAGCAACTGAATGAGGCCAGCGTGTCTATT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000007799.13 ENSMUST00000115453.2 ENSMUST00000115456.6 |
||
| 3UTR GCA 90 bp | GCTGGCCTTCCAGATGCCGTCGAAACTGTGTGTCCCTTCTGGTTCTaGAATCACATCTTCAAAGTCAATCTTGACCACGTCGTCGTTGAG | + |
|
Preference number: 1 (lower is better) Translates to: AGLPDAVETVCPFWF*NHIFKVNLDHVVVE Trigger: CTCAACGACGACGTGGTCAAGATTGACTTTGAAGATGTGATTGCAGAACCAGAAGGGACACACAGTTTCGACGGCATCTGGAAGGCCAGC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000177234.2 |
||
| 3UTR CCA 90 bp | GGTGAAGCTGGCCTTCCAGATGCCGTCGAAACTGTGTGTCCCTTCTaGTTCTGCAATCACATCTTCAAAGTCAATCTTGACCACGTCGTC | + |
|
Preference number: 1 (lower is better) Translates to: GEAGLPDAVETVCPF*FCNHIFKVNLDHVV Trigger: GACGACGTGGTCAAGATTGACTTTGAAGATGTGATTGCAGAACCAGAAGGGACACACAGTTTCGACGGCATCTGGAAGGCCAGCTTCACC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000177234.2 |
||
| 3UTR GCA 90 bp | CACCTTTCTGAACAAAATGATGGTTGGATTAGGTCAAAGGTTCCTTaGAGGGGGAAAGGTCGAGCTTCACAGCATTGCAGACTATTGCAA | + |
|
Preference number: 1 (lower is better) Translates to: HLSEQNDGWIRSKVP*RGKGRASQHCRLLQ Trigger: TTGCAATAGTCTGCAATGCTGTGAAGCTCGACCTTTCCCCCTGCAAGGAACCTTTGACCTAATCCAACCATCATTTTGTTCAGAAAGGTG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000007799.13 ENSMUST00000115453.2 |
||
| 3UTR TCA 90 bp | CAAACAATCAAAGTAGGTAGCAGGTTGGTAAAGTGTCGGCAAGACTaGAGGAGAAAACAAGTCAAGCAGGGTTCCAATACATGTATGAAA | + |
|
Preference number: 1 (lower is better) Translates to: QTIKVGSRLVKCRQD*RRKQVKQGSNTCMK Trigger: TTTCATACATGTATTGGAACCCTGCTTGACTTGTTTTCTCCTTCAGTCTTGCCGACACTTTACCAACCTGCTACCTACTTTGATTGTTTG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000007799.13 ENSMUST00000115453.2 |
||
| 3UTR TCA 90 bp | CTCAGGTACACAGGTGAAATTCCTCAGTTTGGGTTCAGAAAAACTTaGATTTATTACAGCAAGAACATTACCTCAAGCTTTTGTTACCAC | + |
|
Preference number: 1 (lower is better) Translates to: LRYTGEIPQFGFRKT*IYYSKNITSSFCYH Trigger: GTGGTAACAAAAGCTTGAGGTAATGTTCTTGCTGTAATAAATTCAAGTTTTTCTGAACCCAAACTGAGGAATTTCACCTGTGTACCTGAG 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000007799.13 ENSMUST00000115453.2 |
||
| 3UTR-3UTR CCA 90 bp | GTGGTGAAGCTGGCCTTCCAGATGCCGTCGAAACTGTGTGTCCCTTCTGGTTCTCCAGGTCAATCTCCTTaGTGTGCGCGTCATACACTT | + |
|
Preference number: 2 (lower is better) Translates to: VVKLAFQMPSKLCVPSGSPGQSP*CARHTL Trigger: AAGTGTATGACGCGCACACCAAGGAGATTGACCTGG...AGAACCAGAAGGGACACACAGTTTCGACGGCATCTGGAAGGCCAGCTTCACCAC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000177234.2 |
||
| 3UTR-3UTR CCA 90 bp | CCTCATTCAGTTGCTGAGTGGCAGGGAAAGCTGGCTTCTACTTCTGCCAGTCCAGCTGCGAGAGCAACTTaGAATTGGCACCAAGGAAAT | + |
|
Preference number: 2 (lower is better) Translates to: PHSVAEWQGKLASTSASPAARAT*NWHQGN Trigger: ATTTCCTTGGTGCCAATTCCAAGTTGCTCTCGCAGC...TGGACTGGCAGAAGTAGAAGCCAGCTTTCCCTGCCACTCAGCAACTGAATGAGG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000007799.13 ENSMUST00000115453.2 |
||
| 3UTR-3UTR CCA 90 bp | GGTCGAGCTTCACAGCATTGCAGACTATTGCAAGGGCTTTGCATAAAAGGGGTCAGTGGCAGGGAAAGCTaGCTTCTACTTCTGCCAGTC | + |
|
Preference number: 2 (lower is better) Translates to: GRASQHCRLLQGLCIKGVSGRES*LLLLPV Trigger: GACTGGCAGAAGTAGAAGCCAGCTTTCCCTGCCACT...GACCCCTTTTATGCAAAGCCCTTGCAATAGTCTGCAATGCTGTGAAGCTCGACC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000007799.13 ENSMUST00000115453.2 |
||
| 3UTR-3UTR CCA 90 bp | AGGTCGAGCTTCACAGCATTGCAGACTATTGCAAGGGCTTTGCATAAAAGGGGTTTTGACACCCCTCCCTaGAGGTTCACTCATCAGCTG | + |
|
Preference number: 2 (lower is better) Translates to: RSSFTALQTIARALHKRGFDTPP*RFTHQL Trigger: CAGCTGATGAGTGAACCTCCAGGGAGGGGTGTCAAA...ACCCCTTTTATGCAAAGCCCTTGCAATAGTCTGCAATGCTGTGAAGCTCGACCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 2 transcripts: ENSMUST00000007799.13 ENSMUST00000115453.2 |
||
| 3UTR-3UTR TCA 90 bp | GGGAAAGCTGGCTTCTACTTCTGCCAGTCCAGAGAGGTCTCACCCCCATTTGTCAAGATGCTACATAGCTaGGCACAGATATCAACATCA | + |
|
Preference number: 2 (lower is better) Translates to: GKAGFYFCQSREVSPPFVKMLHS*AQISTS Trigger: TGATGTTGATATCTGTGCTCAGCTATGTAGCATCTT...GACAAATGGGGGTGAGACCTCTCTGGACTGGCAGAAGTAGAAGCCAGCTTTCCC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000007799.13 ENSMUST00000115453.2 ENSMUST00000115456.6 |
||
| 3UTR-3UTR GCA 90 bp | CAGTTGCTGAGTGGCAGGGAAAGCTGGCTTCTACTTCTGCCAGTCCAGAGAGGTTCACCCCCATTTGTCTaGTTCAAATCATTTCATTGG | + |
|
Preference number: 2 (lower is better) Translates to: QLLSGRESWLLLLPVQRGSPPFV*FKSFHW Trigger: CCAATGAAATGATTTGAAGCAGACAAATGGGGGTGA...ACCTCTCTGGACTGGCAGAAGTAGAAGCCAGCTTTCCCTGCCACTCAGCAACTG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000007799.13 ENSMUST00000115453.2 ENSMUST00000115456.6 |
||
| 3UTR-3UTR CCA 90 bp | AAGCTGGCTTCTACTTCTGCCAGTCCAGAGAGGTCTCACCCCCATTTGTCTGCTAGAGCAACTTGGAATTaGCACCAAGGAAATAGTAAG | + |
|
Preference number: 2 (lower is better) Translates to: KLASTSASPERSHPHLSARATWN*HQGNSK Trigger: CTTACTATTTCCTTGGTGCCAATTCCAAGTTGCTCT...AGCAGACAAATGGGGGTGAGACCTCTCTGGACTGGCAGAAGTAGAAGCCAGCTT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000007799.13 ENSMUST00000115453.2 |
||
| 3UTR-3UTR CCA 90 bp | AGGTCGAGCTTCACAGCATTGCAGACTATTGCAAGGGCTTTGCATAAAAGGGGTGCTGCGAGAGCAACTTaGAATTGGCACCAAGGAAAT | + |
|
Preference number: 2 (lower is better) Translates to: RSSFTALQTIARALHKRGAARAT*NWHQGN Trigger: ATTTCCTTGGTGCCAATTCCAAGTTGCTCTCGCAGC...ACCCCTTTTATGCAAAGCCCTTGCAATAGTCTGCAATGCTGTGAAGCTCGACCT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000007799.13 ENSMUST00000115453.2 |
||
| 3UTR-3UTR CCA 90 bp | GAGCTGGGAAGTAAAAGGCTTTTGGGTGTCCCAGGCAGGCAGCTTTCTGGAGACTTCAAATCATTTCATTaGGTTAATGTTGACCAGGCT | + |
|
Preference number: 2 (lower is better) Translates to: ELGSKRLLGVPGRQLSGDFKSFH*VNVDQA Trigger: AGCCTGGTCAACATTAACCCAATGAAATGATTTGAA...GTCTCCAGAAAGCTGCCTGCCTGGGACACCCAAAAGCCTTTTACTTCCCAGCTC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000007799.13 ENSMUST00000115453.2 |
||
| 3UTR CAA 90 bp | TCTTCCCTTTGTATGACATCATCACCTTTGAGTAGGCAGTTGAGGTaGTTGGTACTCTTCCCTGCCTCCCAGTCCTTCCTATTTTTCTCA | + |
|
Preference number: 2 (lower is better) Translates to: SSLCMTSSPLSRQLR*LVLFPASQSFLFFS Trigger: TGAGAAAAATAGGAAGGACTGGGAGGCAGGGAAGAGTACCAACAACCTCAACTGCCTACTCAAAGGTGATGATGTCATACAAAGGGAAGA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000007799.13 ENSMUST00000115453.2 |
||
| 3UTR-3UTR TCA 90 bp | GTCAAAGGTTCCTTGCAGGGGGAAAGGTCGAGCTTCACAGCATTGCAGACTATTAAGATGCTACATAGCTaGGCACAGATATCAACATCA | + |
|
Preference number: 2 (lower is better) Translates to: VKGSLQGERSSFTALQTIKMLHS*AQISTS Trigger: TGATGTTGATATCTGTGCTCAGCTATGTAGCATCTT...AATAGTCTGCAATGCTGTGAAGCTCGACCTTTCCCCCTGCAAGGAACCTTTGAC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000007799.13 ENSMUST00000115453.2 |
||
| 3UTR-3UTR TCA 90 bp | CTCCTAAATCATCCCAGTCAGTCACTAAACCTTGATCCTGGTGAGGGGCTGGCTAGAGTCAGGAACCTGTaGTTATTCTTGAAAATGAGT | + |
|
Preference number: 2 (lower is better) Translates to: LLNHPSQSLNLDPGEGLARVRNL*LFLKMS Trigger: ACTCATTTTCAAGAATAATCACAGGTTCCTGACTCT...AGCCAGCCCCTCACCAGGATCAAGGTTTAGTGACTGACTGGGATGATTTAGGAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000007799.13 ENSMUST00000115453.2 |
||
| 3UTR-3UTR GCA 90 bp | TCGGCAAGACTGAAGGAGAAAACAAGTCAAGCAGGGTTCCAATACATGTATGAACGAGCTTCACAGCATTaGAGACTATTGCAAGGGCTT | + |
|
Preference number: 2 (lower is better) Translates to: SARLKEKTSQAGFQYMYERASQH*RLLQGL Trigger: AAGCCCTTGCAATAGTCTGCAATGCTGTGAAGCTCG...TTCATACATGTATTGGAACCCTGCTTGACTTGTTTTCTCCTTCAGTCTTGCCGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000007799.13 ENSMUST00000115453.2 |
||
| 3UTR-3UTR GCA 90 bp | CATTGGGATGCCGAAGATCGTAGACAACAAGCGGTAAAACCAATATTTTGTCACTCAATCTCCTTGGTGTaGGCGTCATACACTTGCTTC | + |
|
Preference number: 2 (lower is better) Translates to: HWDAEDRRQQAVKPIFCHSISLV*ASYTCF Trigger: GAAGCAAGTGTATGACGCGCACACCAAGGAGATTGA...GTGACAAAATATTGGTTTTACCGCTTGTTGTCTACGATCTTCGGCATCCCAATG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000177234.2 |
||
| 3UTR-3UTR CCA 90 bp | GAATTTATTACAGCAAGAACATTACCTCAAGCTTTTGTTACCACCCTTCCCCCATGTTTACAACAGGCTTaGCAGTCTCGGTTTAGCAGC | + |
|
Preference number: 2 (lower is better) Translates to: EFITARTLPQAFVTTLPPCLQQA*QSRFSS Trigger: GCTGCTAAACCGAGACTGCCAAGCCTGTTGTAAACA...TGGGGGAAGGGTGGTAACAAAAGCTTGAGGTAATGTTCTTGCTGTAATAAATTC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000007799.13 ENSMUST00000115453.2 |
||
| 3UTR-3UTR TCA 90 bp | GAATTTATTACAGCAAGAACATTACCTCAAGCTTTTGTTACCACCCTTCCCCCAGGTTCACTCATCAGCTaGAAAGGAAGTACAATGTTG | + |
|
Preference number: 2 (lower is better) Translates to: EFITARTLPQAFVTTLPPGSLIS*KGSTML Trigger: CAACATTGTACTTCCTTTTCAGCTGATGAGTGAACC...TGGGGGAAGGGTGGTAACAAAAGCTTGAGGTAATGTTCTTGCTGTAATAAATTC 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000007799.13 ENSMUST00000115453.2 |
||
| 3UTR CAA 90 bp | GTCTCCAAATTGATGGTGATCCCTAAATCCCTAAATCTAACTGGATaGTTAAGAGTGAGGACAGCAACCAATTCCTTAGATAACTGGCAT | + |
|
Preference number: 2 (lower is better) Translates to: VSKLMVIPKSLNLTG*LRVRTATNSLDNWH Trigger: ATGCCAGTTATCTAAGGAATTGGTTGCTGTCCTCACTCTTAACAATCCAGTTAGATTTAGGGATTTAGGGATCACCATCAATTTGGAGAC 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000007799.13 ENSMUST00000115453.2 |
||
| 3UTR-3UTR CCA 90 bp | CAGGTTCTGTATTTCAGAGTCAGAAACAAGTACAGAGAACTAGCAAGTGCAATTAGAGCAACTTGGAATTaGCACCAAGGAAATAGTAAG | + |
|
Preference number: 2 (lower is better) Translates to: QVLYFRVRNKYRELASAIRATWN*HQGNSK Trigger: CTTACTATTTCCTTGGTGCCAATTCCAAGTTGCTCT...AATTGCACTTGCTAGTTCTCTGTACTTGTTTCTGACTCTGAAATACAGAACCTG 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000007799.13 ENSMUST00000115453.2 |
||
| 3UTR-3UTR TCA 90 bp | TCAAATCATTTCATTGGGTTAATGTTGACCAGGCTTAACAGAGAGAAAGATGCTCATCATGCAAGTAGATaGGTTAGATCCTTTCATCCT | + |
|
Preference number: 2 (lower is better) Translates to: SNHFIGLMLTRLNREKDAHHASR*VRSFHP Trigger: AGGATGAAAGGATCTAACTCATCTACTTGCATGATG...AGCATCTTTCTCTCTGTTAAGCCTGGTCAACATTAACCCAATGAAATGATTTGA 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000115456.6 |
||
| 3UTR-3UTR CAA 90 bp | AAGCTGGCCTTCCAGATGCCGTCGAAACTGTGTGTCCCTTCTGGTTCTGCAATCTTGACCACGTCGTCGTaGAGATGCTTGGGGTCGCGG | + |
|
Preference number: 3 (lower is better) Translates to: KLAFQMPSKLCVPSGSAILTTSS*RCLGSR Trigger: CCGCGACCCCAAGCATCTCAACGACGACGTGGTCAA...GATTGCAGAACCAGAAGGGACACACAGTTTCGACGGCATCTGGAAGGCCAGCTT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000177234.2 |
||
| 3UTR CCA 72 bp | GCTGGCCTCATTCAGTTGCTGAGTGGCAGGGAAAGCTaGCTTCTACTTCTGCCAGTCCAGAGAGGTCTCACC | + |
|
Preference number: 3 (lower is better) Translates to: AGLIQLLSGRES*LLLLPVQRGLT Trigger: GGTGAGACCTCTCTGGACTGGCAGAAGTAGAAGCCAGCTTTCCCTGCCACTCAGCAACTGAATGAGGCCAGC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000007799.13 ENSMUST00000115453.2 ENSMUST00000115456.6 |
||
| 3UTR-3UTR CAA 90 bp | CAGTTGCTGAGTGGCAGGGAAAGCTGGCTTCTACTTCTGCCAGTCCAGAGAGGTAGGCAGTTGAGGTTGTaGGTACTCTTCCCTGCCTCC | + |
|
Preference number: 3 (lower is better) Translates to: QLLSGRESWLLLLPVQRGRQLRL*VLFPAS Trigger: GGAGGCAGGGAAGAGTACCAACAACCTCAACTGCCT...ACCTCTCTGGACTGGCAGAAGTAGAAGCCAGCTTTCCCTGCCACTCAGCAACTG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000007799.13 ENSMUST00000115453.2 |
||
| 3UTR-3UTR CAA 90 bp | CAGTTGCTGAGTGGCAGGGAAAGCTGGCTTCTACTTCTGCCAGTCCAGAGAGGTCCTTTGAGTAGGCAGTaGAGGTTGTTGGTACTCTTC | + |
|
Preference number: 3 (lower is better) Translates to: QLLSGRESWLLLLPVQRGPLSRQ*RLLVLF Trigger: GAAGAGTACCAACAACCTCAACTGCCTACTCAAAGG...ACCTCTCTGGACTGGCAGAAGTAGAAGCCAGCTTTCCCTGCCACTCAGCAACTG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000007799.13 ENSMUST00000115453.2 |
||
| 3UTR-3UTR CAA 90 bp | GAGCTGGGAAGTAAAAGGCTTTTGGGTGTCCCAGGCAGGCAGCTTTCTGGAGACAGGTCTCACCCCCATTaGTCTGCTTCAAATCATTTC | + |
|
Preference number: 3 (lower is better) Translates to: ELGSKRLLGVPGRQLSGDRSHPH*SASNHF Trigger: GAAATGATTTGAAGCAGACAAATGGGGGTGAGACCT...GTCTCCAGAAAGCTGCCTGCCTGGGACACCCAAAAGCCTTTTACTTCCCAGCTC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000007799.13 ENSMUST00000115453.2 |
||
| 3UTR-3UTR CAA 90 bp | CCCTTCTGGTTCTGCAATCACATCTTCAAAGTCAATCTTGACCACGTCGTCGTTTGCTTGGGGTCGCGGTaGACCAGGTCAATCTCCTTG | + |
|
Preference number: 3 (lower is better) Translates to: PFWFCNHIFKVNLDHVVVCLGSR*TRSISL Trigger: CAAGGAGATTGACCTGGTCAACCGCGACCCCAAGCA...AACGACGACGTGGTCAAGATTGACTTTGAAGATGTGATTGCAGAACCAGAAGGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000177234.2 |
||
| 3UTR-3UTR CAA 90 bp | CAGATGCCGTCGAAACTGTGTGTCCCTTCTGGTTCTGCAATCACATCTTCAAAGACCAGGTCAATCTCCTaGGTGTGCGCGTCATACACT | + |
|
Preference number: 3 (lower is better) Translates to: QMPSKLCVPSGSAITSSKTRSIS*VCASYT Trigger: AGTGTATGACGCGCACACCAAGGAGATTGACCTGGT...CTTTGAAGATGTGATTGCAGAACCAGAAGGGACACACAGTTTCGACGGCATCTG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000177234.2 |
||
| 3UTR-3UTR CAA 90 bp | CAGTTGCTGAGTGGCAGGGAAAGCTGGCTTCTACTTCTGCCAGTCCAGAGAGGTCTGAATCTCTTCCCTTaGTATGACATCATCACCTTT | + |
|
Preference number: 3 (lower is better) Translates to: QLLSGRESWLLLLPVQRGLNLFP*YDIITF Trigger: AAAGGTGATGATGTCATACAAAGGGAAGAGATTCAG...ACCTCTCTGGACTGGCAGAAGTAGAAGCCAGCTTTCCCTGCCACTCAGCAACTG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000007799.13 ENSMUST00000115453.2 |
||
| 3UTR GCA 72 bp | CCAGATGCCGTCGAAACTGTGTGTCCCTTCTGGTTCTaGAATCACATCTTCAAAGTCAATCTTGACCACGTC | + |
|
Preference number: 3 (lower is better) Translates to: PDAVETVCPFWF*NHIFKVNLDHV Trigger: GACGTGGTCAAGATTGACTTTGAAGATGTGATTGCAGAACCAGAAGGGACACACAGTTTCGACGGCATCTGG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000177234.2 |
||
| 3UTR CCA 72 bp | GGCCTTCCAGATGCCGTCGAAACTGTGTGTCCCTTCTaGTTCTGCAATCACATCTTCAAAGTCAATCTTGAC | + |
|
Preference number: 3 (lower is better) Translates to: GLPDAVETVCPF*FCNHIFKVNLD Trigger: GTCAAGATTGACTTTGAAGATGTGATTGCAGAACCAGAAGGGACACACAGTTTCGACGGCATCTGGAAGGCC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000177234.2 |
||
| 3UTR-3UTR CAA 90 bp | GGAAAGCTGGCTTCTACTTCTGCCAGTCCAGAGAGGTCTCACCCCCATTTGTCTAAACCATTCATAAATTaGCTGCTGCGAGAGCAACTT | + |
|
Preference number: 3 (lower is better) Translates to: GKLASTSASPERSHPHLSKPFIN*LLREQL Trigger: AAGTTGCTCTCGCAGCAGCAAATTTATGAATGGTTT...AGACAAATGGGGGTGAGACCTCTCTGGACTGGCAGAAGTAGAAGCCAGCTTTCC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000007799.13 ENSMUST00000115453.2 |
||
| 3UTR-3UTR CAA 90 bp | GTCAAAGGTTCCTTGCAGGGGGAAAGGTCGAGCTTCACAGCATTGCAGACTATTAGGTCTCACCCCCATTaGTCTGCTTCAAATCATTTC | + |
|
Preference number: 3 (lower is better) Translates to: VKGSLQGERSSFTALQTIRSHPH*SASNHF Trigger: GAAATGATTTGAAGCAGACAAATGGGGGTGAGACCT...AATAGTCTGCAATGCTGTGAAGCTCGACCTTTCCCCCTGCAAGGAACCTTTGAC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000007799.13 ENSMUST00000115453.2 |
||
| 3UTR-3UTR CAA 90 bp | CCTCATTCAGTTGCTGAGTGGCAGGGAAAGCTGGCTTCTACTTCTGCCAGTCCAGTGGGAATGAATTCTTaGTTCTTGATCAAGACAAAC | + |
|
Preference number: 3 (lower is better) Translates to: PHSVAEWQGKLASTSASPVGMNS*FLIKTN Trigger: GTTTGTCTTGATCAAGAACAAAGAATTCATTCCCAC...TGGACTGGCAGAAGTAGAAGCCAGCTTTCCCTGCCACTCAGCAACTGAATGAGG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000007799.13 ENSMUST00000115453.2 |
||
| 3UTR GCA 72 bp | CGAGCTTCACAGCATTGCAGACTATTGCAAGGGCTTTaGATAAAAGGGGTCATGTTTACAACAGGCTTGGCA | + |
|
Preference number: 3 (lower is better) Translates to: RASQHCRLLQGL*IKGVMFTTGLA Trigger: TGCCAAGCCTGTTGTAAACATGACCCCTTTTATGCAAAGCCCTTGCAATAGTCTGCAATGCTGTGAAGCTCG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000007799.13 ENSMUST00000115453.2 |
||
| 3UTR TCA 72 bp | CAGGCAGGCAGCTTTCTGGAGACTCAGGTACACAGGTaGAATTCCTCAGTTTGGGTTCAGAAAAACTTGAAT | + |
|
Preference number: 3 (lower is better) Translates to: QAGSFLETQVHR*NSSVWVQKNLN Trigger: ATTCAAGTTTTTCTGAACCCAAACTGAGGAATTTCACCTGTGTACCTGAGTCTCCAGAAAGCTGCCTGCCTG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000007799.13 ENSMUST00000115453.2 |
||
| 3UTR GCA 72 bp | TTCTGCCAGTCCAGAGAGGTCTCACCCCCATTTGTCTaGTTCAAATCATTTCATTGGGTTAATGTTGACCAG | + |
|
Preference number: 3 (lower is better) Translates to: FCQSREVSPPFV*FKSFHWVNVDQ Trigger: CTGGTCAACATTAACCCAATGAAATGATTTGAAGCAGACAAATGGGGGTGAGACCTCTCTGGACTGGCAGAA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000007799.13 ENSMUST00000115453.2 ENSMUST00000115456.6 |
||
| 3UTR TCA 72 bp | AAAGTAGGTAGCAGGTTGGTAAAGTGTCGGCAAGACTaGAGGAGAAAACAAGTCAAGCAGGGTTCCAATACA | + |
|
Preference number: 3 (lower is better) Translates to: KVGSRLVKCRQD*RRKQVKQGSNT Trigger: TGTATTGGAACCCTGCTTGACTTGTTTTCTCCTTCAGTCTTGCCGACACTTTACCAACCTGCTACCTACTTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000007799.13 ENSMUST00000115453.2 |
||
| 3UTR-3UTR CAA 90 bp | CAACAGGTTCTGTATTTCAGAGTCAGAAACAAGTACAGAGAACTAGCAAGTGCACCTTTGAGTAGGCAGTaGAGGTTGTTGGTACTCTTC | + |
|
Preference number: 3 (lower is better) Translates to: QQVLYFRVRNKYRELASAPLSRQ*RLLVLF Trigger: GAAGAGTACCAACAACCTCAACTGCCTACTCAAAGG...TGCACTTGCTAGTTCTCTGTACTTGTTTCTGACTCTGAAATACAGAACCTGTTG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000007799.13 ENSMUST00000115453.2 |
||
| 3UTR-3UTR CAA 90 bp | ACCAATTCCTTAGATAACTGGCATATATTAAAAACGTTCCTTCATGCCCCTAAAAGTAGGCAGTTGAGGTaGTTGGTACTCTTCCCTGCC | + |
|
Preference number: 3 (lower is better) Translates to: TNSLDNWHILKTFLHAPKSRQLR*LVLFPA Trigger: GGCAGGGAAGAGTACCAACAACCTCAACTGCCTACT...TTTAGGGGCATGAAGGAACGTTTTTAATATATGCCAGTTATCTAAGGAATTGGT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000007799.13 ENSMUST00000115453.2 |
||
| 3UTR-3UTR CAA 90 bp | CAGGTTCTGTATTTCAGAGTCAGAAACAAGTACAGAGAACTAGCAAGTGCAATTAAACCATTCATAAATTaGCTGCTGCGAGAGCAACTT | + |
|
Preference number: 3 (lower is better) Translates to: QVLYFRVRNKYRELASAIKPFIN*LLREQL Trigger: AAGTTGCTCTCGCAGCAGCAAATTTATGAATGGTTT...AATTGCACTTGCTAGTTCTCTGTACTTGTTTCTGACTCTGAAATACAGAACCTG 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000007799.13 ENSMUST00000115453.2 |
||
| 3UTR TCA 72 bp | ACAGGTGAAATTCCTCAGTTTGGGTTCAGAAAAACTTaGATTTATTACAGCAAGAACATTACCTCAAGCTTT | + |
|
Preference number: 3 (lower is better) Translates to: TGEIPQFGFRKT*IYYSKNITSSF Trigger: AAAGCTTGAGGTAATGTTCTTGCTGTAATAAATTCAAGTTTTTCTGAACCCAAACTGAGGAATTTCACCTGT 35% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000007799.13 ENSMUST00000115453.2 |
||
| CDS-3UTR GCA 90 bp | TGCCAGCAGGAAGAGGCAGGCAGATGCGACATTTCTGACACCAGACCCGCAGGGACGTCGTCGTTGAGATaGTTGGGGTCGCGGTTGACC | + |
|
Preference number: 4 (lower is better) Translates to: CQQEEAGRCDISDTRPAGTSSLR*LGSRLT Trigger: GGTCAACCGCGACCCCAAGCATCTCAACGACGACGT...CCCTGCGGGTCTGGTGTCAGAAATGTCGCATCTGCCTGCCTCTTCCTGCTGGCA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000150901.2 |
||
| CDS-3UTR CCA 90 bp | TGCCAGCAGGAAGAGGCAGGCAGATGCGACATTTCTGACACCAGACCCGCAGGGTGGGAGAGTACACTGTaGGACCCAGACAGCAACATG | + |
|
Preference number: 4 (lower is better) Translates to: CQQEEAGRCDISDTRPAGWESTL*DPDSNM Trigger: CATGTTGCTGTCTGGGTCCCACAGTGTACTCTCCCA...CCCTGCGGGTCTGGTGTCAGAAATGTCGCATCTGCCTGCCTCTTCCTGCTGGCA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000150901.2 |
||
| CDS-3UTR GCA 90 bp | GGCCTCATTCAGTTGCTGAGTGGCAGGGAAAGCTGGCTTCTACTTCTGCCAGTCACGTCGTCGTTGAGATaGTTGGGGTCGCGGTTGACC | + |
|
Preference number: 4 (lower is better) Translates to: GLIQLLSGRESWLLLLPVTSSLR*LGSRLT Trigger: GGTCAACCGCGACCCCAAGCATCTCAACGACGACGT...GACTGGCAGAAGTAGAAGCCAGCTTTCCCTGCCACTCAGCAACTGAATGAGGCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000007799.13 ENSMUST00000115453.2 ENSMUST00000115456.6 |
||
| CDS-3UTR CCA 90 bp | CTTGCCAGCAGGAAGAGGCAGGCAGATGCGACATTTCTGACACCAGACCCGCAGTCACCTCGTCTGCCATaGCCTTGTTGTTGGGCTTGT | + |
|
Preference number: 4 (lower is better) Translates to: LASRKRQADATFLTPDPQSPRLP*PCCWAC Trigger: ACAAGCCCAACAACAAGGCCATGGCAGACGAGGTGA...CTGCGGGTCTGGTGTCAGAAATGTCGCATCTGCCTGCCTCTTCCTGCTGGCAAG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000150901.2 |
||
| CDS-3UTR CCA 90 bp | TGCCAGCAGGAAGAGGCAGGCAGATGCGACATTTCTGACACCAGACCCGCAGGGCCAGGTCAATCTCCTTaGTGTGCGCGTCATACACTT | + |
|
Preference number: 4 (lower is better) Translates to: CQQEEAGRCDISDTRPAGPGQSP*CARHTL Trigger: AAGTGTATGACGCGCACACCAAGGAGATTGACCTGG...CCCTGCGGGTCTGGTGTCAGAAATGTCGCATCTGCCTGCCTCTTCCTGCTGGCA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000150901.2 |
||
| CDS-3UTR GCA 90 bp | CCTCATTCAGTTGCTGAGTGGCAGGGAAAGCTGGCTTCTACTTCTGCCAGTCCAACGTCGTCGTTGAGATaGTTGGGGTCGCGGTTGACC | + |
|
Preference number: 4 (lower is better) Translates to: PHSVAEWQGKLASTSASPTSSLR*LGSRLT Trigger: GGTCAACCGCGACCCCAAGCATCTCAACGACGACGT...TGGACTGGCAGAAGTAGAAGCCAGCTTTCCCTGCCACTCAGCAACTGAATGAGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000007799.13 ENSMUST00000115453.2 ENSMUST00000115456.6 |
||
| CDS-3UTR GCA 90 bp | GGCCTCATTCAGTTGCTGAGTGGCAGGGAAAGCTGGCTTCTACTTCTGCCAGTCAGCTGGCCTTCCAGATaGCGTCGAAACTGTGTGTCC | + |
|
Preference number: 4 (lower is better) Translates to: GLIQLLSGRESWLLLLPVSWPSR*RRNCVS Trigger: GGACACACAGTTTCGACGGCATCTGGAAGGCCAGCT...GACTGGCAGAAGTAGAAGCCAGCTTTCCCTGCCACTCAGCAACTGAATGAGGCC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000007799.13 ENSMUST00000115453.2 ENSMUST00000115456.6 |
||
| CDS-3UTR TCA 90 bp | CACGCTGGCCTCATTCAGTTGCTGAGTGGCAGGGAAAGCTGGCTTCTACTTCTGAGTAAATGCCCCAGATaGGTGCCATTGGGATGCCGA | + |
|
Preference number: 4 (lower is better) Translates to: HAGLIQLLSGRESWLLLLSKCPR*VPLGCR Trigger: TCGGCATCCCAATGGCACTCATCTGGGGCATTTACT...CAGAAGTAGAAGCCAGCTTTCCCTGCCACTCAGCAACTGAATGAGGCCAGCGTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000007799.13 ENSMUST00000115453.2 ENSMUST00000115456.6 |
||
| CDS-3UTR TCA 90 bp | AAGCTGGCTTCTACTTCTGCCAGTCCAGAGAGGTCTCACCCCCATTTGTCTGCTCAATCAGGAAGCTCTTaGTGCACGGTACAACCGCCC | + |
|
Preference number: 4 (lower is better) Translates to: KLASTSASPERSHPHLSAQSGSS*CTVQPP Trigger: GGGCGGTTGTACCGTGCATCAAGAGCTTCCTGATTG...AGCAGACAAATGGGGGTGAGACCTCTCTGGACTGGCAGAAGTAGAAGCCAGCTT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000007799.13 ENSMUST00000115453.2 ENSMUST00000115456.6 |
||
| CDS-3UTR GCA 90 bp | AGACACGCTGGCCTCATTCAGTTGCTGAGTGGCAGGGAAAGCTGGCTTCTACTTCTCAGTCACCTCGTCTaGCATGGCCTTGTTGTTGGG | + |
|
Preference number: 4 (lower is better) Translates to: RHAGLIQLLSGRESWLLLLSHLV*HGLVVG Trigger: CCCAACAACAAGGCCATGGCAGACGAGGTGACTGAG...AAGTAGAAGCCAGCTTTCCCTGCCACTCAGCAACTGAATGAGGCCAGCGTGTCT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000007799.13 ENSMUST00000115456.6 |
||
| CDS-3UTR GCA 90 bp | AGACACGCTGGCCTCATTCAGTTGCTGAGTGGCAGGGAAAGCTGGCTTCTACTTAGCTGGCCTTCCAGATaGCGTCGAAACTGTGTGTCC | + |
|
Preference number: 4 (lower is better) Translates to: RHAGLIQLLSGRESWLLLSWPSR*RRNCVS Trigger: GGACACACAGTTTCGACGGCATCTGGAAGGCCAGCT...AAGTAGAAGCCAGCTTTCCCTGCCACTCAGCAACTGAATGAGGCCAGCGTGTCT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000007799.13 ENSMUST00000115453.2 ENSMUST00000115456.6 |
||
| CDS-3UTR GCA 90 bp | GGGAAAGCTGGCTTCTACTTCTGCCAGTCCAGAGAGGTCTCACCCCCATTTGTCACAACCGCCCAGATGTaGAGGAAGGAGAGAATGGCA | + |
|
Preference number: 4 (lower is better) Translates to: GKAGFYFCQSREVSPPFVTTAQM*RKERMA Trigger: TGCCATTCTCTCCTTCCTGCACATCTGGGCGGTTGT...GACAAATGGGGGTGAGACCTCTCTGGACTGGCAGAAGTAGAAGCCAGCTTTCCC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000007799.13 ENSMUST00000115453.2 ENSMUST00000115456.6 |
||
| CDS-3UTR CCA 90 bp | GAGCTGGGAAGTAAAAGGCTTTTGGGTGTCCCAGGCAGGCAGCTTTCTGGAGACTGCCCTGTTCCCGGATaGGAACAGTGTAGAGATGTC | + |
|
Preference number: 4 (lower is better) Translates to: ELGSKRLLGVPGRQLSGDCPVPG*EQCRDV Trigger: GACATCTCTACACTGTTCCCATCCGGGAACAGGGCA...GTCTCCAGAAAGCTGCCTGCCTGGGACACCCAAAAGCCTTTTACTTCCCAGCTC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000007799.13 |
||
| CDS-3UTR CCA 90 bp | GAGCTGGGAAGTAAAAGGCTTTTGGGTGTCCCAGGCAGGCAGCTTTCTGGAGACTCACCTCGTCTGCCATaGCCTTGTTGTTGGGCTTGT | + |
|
Preference number: 4 (lower is better) Translates to: ELGSKRLLGVPGRQLSGDSPRLP*PCCWAC Trigger: ACAAGCCCAACAACAAGGCCATGGCAGACGAGGTGA...GTCTCCAGAAAGCTGCCTGCCTGGGACACCCAAAAGCCTTTTACTTCCCAGCTC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000007799.13 |
||
| CDS-3UTR CCA 90 bp | CACGCTGGCCTCATTCAGTTGCTGAGTGGCAGGGAAAGCTGGCTTCTACTTCTGTCACCTCGTCTGCCATaGCCTTGTTGTTGGGCTTGT | + |
|
Preference number: 4 (lower is better) Translates to: HAGLIQLLSGRESWLLLLSPRLP*PCCWAC Trigger: ACAAGCCCAACAACAAGGCCATGGCAGACGAGGTGA...CAGAAGTAGAAGCCAGCTTTCCCTGCCACTCAGCAACTGAATGAGGCCAGCGTG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000007799.13 ENSMUST00000115456.6 |
||
| CDS-3UTR TCA 90 bp | GAAAGCTGGCTTCTACTTCTGCCAGTCCAGAGAGGTCTCACCCCCATTTGTCTGAGTAAATGCCCCAGATaGGTGCCATTGGGATGCCGA | + |
|
Preference number: 4 (lower is better) Translates to: ESWLLLLPVQRGLTPICLSKCPR*VPLGCR Trigger: TCGGCATCCCAATGGCACTCATCTGGGGCATTTACT...CAGACAAATGGGGGTGAGACCTCTCTGGACTGGCAGAAGTAGAAGCCAGCTTTC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000007799.13 ENSMUST00000115453.2 ENSMUST00000115456.6 |
||
| CDS-3UTR GCA 90 bp | GAACTTGCCAGCAGGAAGAGGCAGGCAGATGCGACATTTCTGACACCAGACCCGTCAATCTCCTTGGTGTaGGCGTCATACACTTGCTTC | + |
|
Preference number: 4 (lower is better) Translates to: ELASRKRQADATFLTPDPSISLV*ASYTCF Trigger: GAAGCAAGTGTATGACGCGCACACCAAGGAGATTGA...CGGGTCTGGTGTCAGAAATGTCGCATCTGCCTGCCTCTTCCTGCTGGCAAGTTC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000150901.2 |
||
| CDS-3UTR CCA 90 bp | GAGCTGGGAAGTAAAAGGCTTTTGGGTGTCCCAGGCAGGCAGCTTTCTGGAGACCCAGGTCAATCTCCTTaGTGTGCGCGTCATACACTT | + |
|
Preference number: 4 (lower is better) Translates to: ELGSKRLLGVPGRQLSGDPGQSP*CARHTL Trigger: AAGTGTATGACGCGCACACCAAGGAGATTGACCTGG...GTCTCCAGAAAGCTGCCTGCCTGGGACACCCAAAAGCCTTTTACTTCCCAGCTC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000007799.13 ENSMUST00000115453.2 |
||
| CDS-3UTR CCA 90 bp | TCAGTTGCTGAGTGGCAGGGAAAGCTGGCTTCTACTTCTGCCAGTCCAGAGAGGCCAGGTCAATCTCCTTaGTGTGCGCGTCATACACTT | + |
|
Preference number: 4 (lower is better) Translates to: SVAEWQGKLASTSASPERPGQSP*CARHTL Trigger: AAGTGTATGACGCGCACACCAAGGAGATTGACCTGG...CCTCTCTGGACTGGCAGAAGTAGAAGCCAGCTTTCCCTGCCACTCAGCAACTGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000007799.13 ENSMUST00000115453.2 ENSMUST00000115456.6 |
||
| CDS-3UTR TCA 90 bp | CATTCAGTTGCTGAGTGGCAGGGAAAGCTGGCTTCTACTTCTGCCAGTCCAGAGTGGAGTAGACGCGGCTaGTGCACTGAATCTCAATCA | + |
|
Preference number: 4 (lower is better) Translates to: HSVAEWQGKLASTSASPEWSRRG*CTESQS Trigger: TGATTGAGATTCAGTGCATCAGCCGCGTCTACTCCA...CTCTGGACTGGCAGAAGTAGAAGCCAGCTTTCCCTGCCACTCAGCAACTGAATG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000007799.13 ENSMUST00000115453.2 ENSMUST00000115456.6 |
||
| CDS-3UTR GCA 90 bp | ATTCCTGCTGAACTTGCCAGCAGGAAGAGGCAGGCAGATGCGACATTTCTGACATGGGCTTGTAGATGTTaGCCTGTTCCCGGATGGGAA | + |
|
Preference number: 4 (lower is better) Translates to: IPAELASRKRQADATFLTWACRC*PVPGWE Trigger: TTCCCATCCGGGAACAGGGCAACATCTACAAGCCCA...TGTCAGAAATGTCGCATCTGCCTGCCTCTTCCTGCTGGCAAGTTCAGCAGGAAT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000150901.2 |
||
| CDS-3UTR CCA 90 bp | ATTCCTGCTGAACTTGCCAGCAGGAAGAGGCAGGCAGATGCGACATTTCTGACATGCCCTGTTCCCGGATaGGAACAGTGTAGAGATGTC | + |
|
Preference number: 4 (lower is better) Translates to: IPAELASRKRQADATFLTCPVPG*EQCRDV Trigger: GACATCTCTACACTGTTCCCATCCGGGAACAGGGCA...TGTCAGAAATGTCGCATCTGCCTGCCTCTTCCTGCTGGCAAGTTCAGCAGGAAT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000150901.2 |
||
| CDS-3UTR CCA 90 bp | AAGCTGGCTTCTACTTCTGCCAGTCCAGAGAGGTCTCACCCCCATTTGTCTGCTCCATGGCCTTGTTGTTaGGCTTGTAGATGTTGCCCT | + |
|
Preference number: 4 (lower is better) Translates to: KLASTSASPERSHPHLSAPWPCC*ACRCCP Trigger: AGGGCAACATCTACAAGCCCAACAACAAGGCCATGG...AGCAGACAAATGGGGGTGAGACCTCTCTGGACTGGCAGAAGTAGAAGCCAGCTT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000007799.13 ENSMUST00000115456.6 |
||
| CDS-3UTR GCA 90 bp | GAAAGCTGGCTTCTACTTCTGCCAGTCCAGAGAGGTCTCACCCCCATTTGTCTGTCAATCTCCTTGGTGTaGGCGTCATACACTTGCTTC | + |
|
Preference number: 4 (lower is better) Translates to: ESWLLLLPVQRGLTPICLSISLV*ASYTCF Trigger: GAAGCAAGTGTATGACGCGCACACCAAGGAGATTGA...CAGACAAATGGGGGTGAGACCTCTCTGGACTGGCAGAAGTAGAAGCCAGCTTTC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000007799.13 ENSMUST00000115453.2 ENSMUST00000115456.6 |
||
| CDS-3UTR GCA 90 bp | GTGAAACTGAATAGACACGCTGGCCTCATTCAGTTGCTGAGTGGCAGGGAAAGCAATGCCCCAGATGAGTaGCATTGGGATGCCGAAGAT | + |
|
Preference number: 4 (lower is better) Translates to: VKLNRHAGLIQLLSGRESNAPDE*HWDAED Trigger: ATCTTCGGCATCCCAATGGCACTCATCTGGGGCATT...GCTTTCCCTGCCACTCAGCAACTGAATGAGGCCAGCGTGTCTATTCAGTTTCAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000007799.13 ENSMUST00000115453.2 ENSMUST00000115456.6 |
||
| CDS-3UTR GCA 90 bp | GTCAAAGGTTCCTTGCAGGGGGAAAGGTCGAGCTTCACAGCATTGCAGACTATTACAACCGCCCAGATGTaGAGGAAGGAGAGAATGGCA | + |
|
Preference number: 4 (lower is better) Translates to: VKGSLQGERSSFTALQTITTAQM*RKERMA Trigger: TGCCATTCTCTCCTTCCTGCACATCTGGGCGGTTGT...AATAGTCTGCAATGCTGTGAAGCTCGACCTTTCCCCCTGCAAGGAACCTTTGAC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000007799.13 ENSMUST00000115453.2 |
||
| 3UTR CAA 72 bp | CCTTCTGGTTCTGCAATCACATCTTCAAAGTCAATCTaGACCACGTCGTCGTTGAGATGCTTGGGGTCGCGG | + |
|
Preference number: 4 (lower is better) Translates to: PSGSAITSSKSI*TTSSLRCLGSR Trigger: CCGCGACCCCAAGCATCTCAACGACGACGTGGTCAAGATTGACTTTGAAGATGTGATTGCAGAACCAGAAGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000177234.2 |
||
| CDS-3UTR GCA 90 bp | GGTCGAGCTTCACAGCATTGCAGACTATTGCAAGGGCTTTGCATAAAAGGGGTCAATGCCCCAGATGAGTaGCATTGGGATGCCGAAGAT | + |
|
Preference number: 4 (lower is better) Translates to: GRASQHCRLLQGLCIKGVNAPDE*HWDAED Trigger: ATCTTCGGCATCCCAATGGCACTCATCTGGGGCATT...GACCCCTTTTATGCAAAGCCCTTGCAATAGTCTGCAATGCTGTGAAGCTCGACC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000007799.13 ENSMUST00000115453.2 |
||
| CDS-3UTR CCA 90 bp | ATCACATCTTCAAAGTCAATCTTGACCACGTCGTCGTTGAGATGCTTGGGGTCGTGCCCTGTTCCCGGATaGGAACAGTGTAGAGATGTC | + |
|
Preference number: 4 (lower is better) Translates to: ITSSKSILTTSSLRCLGSCPVPG*EQCRDV Trigger: GACATCTCTACACTGTTCCCATCCGGGAACAGGGCA...CGACCCCAAGCATCTCAACGACGACGTGGTCAAGATTGACTTTGAAGATGTGAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000177234.2 |
||
| CDS-3UTR CCA 90 bp | CAGATGCCGTCGAAACTGTGTGTCCCTTCTGGTTCTGCAATCACATCTTCAAAGTCACCTCGTCTGCCATaGCCTTGTTGTTGGGCTTGT | + |
|
Preference number: 4 (lower is better) Translates to: QMPSKLCVPSGSAITSSKSPRLP*PCCWAC Trigger: ACAAGCCCAACAACAAGGCCATGGCAGACGAGGTGA...CTTTGAAGATGTGATTGCAGAACCAGAAGGGACACACAGTTTCGACGGCATCTG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000177234.2 |
||
| CDS-3UTR CCA 90 bp | CACGCTGGCCTCATTCAGTTGCTGAGTGGCAGGGAAAGCTGGCTTCTACTTCTGAATAGCTTCAAAGAGTaGATCGCAGAAGGTATGGAC | + |
|
Preference number: 4 (lower is better) Translates to: HAGLIQLLSGRESWLLLLNSFKE*IAEGMD Trigger: GTCCATACCTTCTGCGATCCACTCTTTGAAGCTATT...CAGAAGTAGAAGCCAGCTTTCCCTGCCACTCAGCAACTGAATGAGGCCAGCGTG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000007799.13 ENSMUST00000115453.2 ENSMUST00000115456.6 |
||
| 3UTR CAA 72 bp | TCCCTTTGTATGACATCATCACCTTTGAGTAGGCAGTaGAGGTTGTTGGTACTCTTCCCTGCCTCCCAGTCC | + |
|
Preference number: 4 (lower is better) Translates to: SLCMTSSPLSRQ*RLLVLFPASQS Trigger: GGACTGGGAGGCAGGGAAGAGTACCAACAACCTCAACTGCCTACTCAAAGGTGATGATGTCATACAAAGGGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000007799.13 ENSMUST00000115453.2 |
||
| CDS-3UTR GCA 90 bp | CGAGCTTCACAGCATTGCAGACTATTGCAAGGGCTTTGCATAAAAGGGGTCATGAATGCCCCAGATGAGTaGCATTGGGATGCCGAAGAT | + |
|
Preference number: 4 (lower is better) Translates to: RASQHCRLLQGLCIKGVMNAPDE*HWDAED Trigger: ATCTTCGGCATCCCAATGGCACTCATCTGGGGCATT...CATGACCCCTTTTATGCAAAGCCCTTGCAATAGTCTGCAATGCTGTGAAGCTCG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000007799.13 ENSMUST00000115453.2 |
||
| CDS-3UTR CCA 90 bp | GCTGCCGGCATCATGCAAGTAGATGAGTTAGATCCTTTCATCCTTGAAATGTCCTGCCCTGTTCCCGGATaGGAACAGTGTAGAGATGTC | + |
|
Preference number: 4 (lower is better) Translates to: AAGIMQVDELDPFILEMSCPVPG*EQCRDV Trigger: GACATCTCTACACTGTTCCCATCCGGGAACAGGGCA...GGACATTTCAAGGATGAAAGGATCTAACTCATCTACTTGCATGATGCCGGCAGC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000115456.6 |
||
| 3UTR CAA 72 bp | TGTATGACATCATCACCTTTGAGTAGGCAGTTGAGGTaGTTGGTACTCTTCCCTGCCTCCCAGTCCTTCCTA | + |
|
Preference number: 4 (lower is better) Translates to: CMTSSPLSRQLR*LVLFPASQSFL Trigger: TAGGAAGGACTGGGAGGCAGGGAAGAGTACCAACAACCTCAACTGCCTACTCAAAGGTGATGATGTCATACA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000007799.13 ENSMUST00000115453.2 |
||
| CDS-3UTR GCA 90 bp | CCAGAGAGGTCTCACCCCCATTTGTCTGCTTCAAATCATTTCATTGGGTTAATGACAACCGCCCAGATGTaGAGGAAGGAGAGAATGGCA | + |
|
Preference number: 4 (lower is better) Translates to: PERSHPHLSASNHFIGLMTTAQM*RKERMA Trigger: TGCCATTCTCTCCTTCCTGCACATCTGGGCGGTTGT...CATTAACCCAATGAAATGATTTGAAGCAGACAAATGGGGGTGAGACCTCTCTGG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000007799.13 ENSMUST00000115453.2 ENSMUST00000115456.6 |
||
| CDS-3UTR TCA 90 bp | CCAGAGAGGTCTCACCCCCATTTGTCTGCTTCAAATCATTTCATTGGGTTAATGTGGAGTAGACGCGGCTaGTGCACTGAATCTCAATCA | + |
|
Preference number: 4 (lower is better) Translates to: PERSHPHLSASNHFIGLMWSRRG*CTESQS Trigger: TGATTGAGATTCAGTGCATCAGCCGCGTCTACTCCA...CATTAACCCAATGAAATGATTTGAAGCAGACAAATGGGGGTGAGACCTCTCTGG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000007799.13 ENSMUST00000115453.2 ENSMUST00000115456.6 |
||
| CDS-3UTR GCA 90 bp | CAGGTTCTGTATTTCAGAGTCAGAAACAAGTACAGAGAACTAGCAAGTGCAATTACGTCGTCGTTGAGATaGTTGGGGTCGCGGTTGACC | + |
|
Preference number: 4 (lower is better) Translates to: QVLYFRVRNKYRELASAITSSLR*LGSRLT Trigger: GGTCAACCGCGACCCCAAGCATCTCAACGACGACGT...AATTGCACTTGCTAGTTCTCTGTACTTGTTTCTGACTCTGAAATACAGAACCTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000007799.13 ENSMUST00000115453.2 ENSMUST00000115456.6 |
||
| 3UTR CAA 72 bp | TCGAGCTTCACAGCATTGCAGACTATTGCAAGGGCTTaGCATAAAAGGGGTCATGTTTACAACAGGCTTGGC | + |
|
Preference number: 4 (lower is better) Translates to: SSFTALQTIARA*HKRGHVYNRLG Trigger: GCCAAGCCTGTTGTAAACATGACCCCTTTTATGCAAAGCCCTTGCAATAGTCTGCAATGCTGTGAAGCTCGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000007799.13 ENSMUST00000115453.2 |
||
| CDS-3UTR TCA 90 bp | TTGTCTGCTTCAAATCATTTCATTGGGTTAATGTTGACCAGGCTTAACAGAGAGCAATCAGGAAGCTCTTaGTGCACGGTACAACCGCCC | + |
|
Preference number: 4 (lower is better) Translates to: LSASNHFIGLMLTRLNREQSGSS*CTVQPP Trigger: GGGCGGTTGTACCGTGCATCAAGAGCTTCCTGATTG...CTCTCTGTTAAGCCTGGTCAACATTAACCCAATGAAATGATTTGAAGCAGACAA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000007799.13 ENSMUST00000115453.2 ENSMUST00000115456.6 |
||
| CDS-3UTR TCA 90 bp | TCGGCAAGACTGAAGGAGAAAACAAGTCAAGCAGGGTTCCAATACATGTATGAATGGAGTAGACGCGGCTaGTGCACTGAATCTCAATCA | + |
|
Preference number: 4 (lower is better) Translates to: SARLKEKTSQAGFQYMYEWSRRG*CTESQS Trigger: TGATTGAGATTCAGTGCATCAGCCGCGTCTACTCCA...TTCATACATGTATTGGAACCCTGCTTGACTTGTTTTCTCCTTCAGTCTTGCCGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000007799.13 ENSMUST00000115453.2 |
||
| CDS-3UTR GCA 90 bp | CAACAGGTTCTGTATTTCAGAGTCAGAAACAAGTACAGAGAACTAGCAAGTGCATGGGCTTGTAGATGTTaGCCTGTTCCCGGATGGGAA | + |
|
Preference number: 4 (lower is better) Translates to: QQVLYFRVRNKYRELASAWACRC*PVPGWE Trigger: TTCCCATCCGGGAACAGGGCAACATCTACAAGCCCA...TGCACTTGCTAGTTCTCTGTACTTGTTTCTGACTCTGAAATACAGAACCTGTTG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000007799.13 ENSMUST00000115456.6 |
||
| CDS-3UTR GCA 90 bp | GATGCCGAAGATCGTAGACAACAAGCGGTAAAACCAATATTTTGTCACAGTGAATGGGCTTGTAGATGTTaGCCTGTTCCCGGATGGGAA | + |
|
Preference number: 4 (lower is better) Translates to: DAEDRRQQAVKPIFCHSEWACRC*PVPGWE Trigger: TTCCCATCCGGGAACAGGGCAACATCTACAAGCCCA...TTCACTGTGACAAAATATTGGTTTTACCGCTTGTTGTCTACGATCTTCGGCATC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000177234.2 |
||
| CDS-3UTR GCA 90 bp | TTGTCTGCTTCAAATCATTTCATTGGGTTAATGTTGACCAGGCTTAACAGAGAGAGCTGGCCTTCCAGATaGCGTCGAAACTGTGTGTCC | + |
|
Preference number: 4 (lower is better) Translates to: LSASNHFIGLMLTRLNRESWPSR*RRNCVS Trigger: GGACACACAGTTTCGACGGCATCTGGAAGGCCAGCT...CTCTCTGTTAAGCCTGGTCAACATTAACCCAATGAAATGATTTGAAGCAGACAA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000007799.13 ENSMUST00000115453.2 ENSMUST00000115456.6 |
||
| CDS-3UTR TCA 90 bp | TACATAGCTGAGCACAGATATCAACATCAACAGGTTCTGTATTTCAGAGTCAGAAGTAAATGCCCCAGATaGGTGCCATTGGGATGCCGA | + |
|
Preference number: 4 (lower is better) Translates to: YIAEHRYQHQQVLYFRVRSKCPR*VPLGCR Trigger: TCGGCATCCCAATGGCACTCATCTGGGGCATTTACT...TCTGACTCTGAAATACAGAACCTGTTGATGTTGATATCTGTGCTCAGCTATGTA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000007799.13 ENSMUST00000115453.2 ENSMUST00000115456.6 |
||
| CDS-3UTR GCA 90 bp | CATAAATTTGCTGCTGCGAGAGCAACTTGGAATTGGCACCAAGGAAATAGTAAGTCAATCTCCTTGGTGTaGGCGTCATACACTTGCTTC | + |
|
Preference number: 4 (lower is better) Translates to: HKFAAARATWNWHQGNSKSISLV*ASYTCF Trigger: GAAGCAAGTGTATGACGCGCACACCAAGGAGATTGA...CTTACTATTTCCTTGGTGCCAATTCCAAGTTGCTCTCGCAGCAGCAAATTTATG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000007799.13 ENSMUST00000115453.2 |
||
| 3UTR CAA 72 bp | TCTACTTCTGCCAGTCCAGAGAGGTCTCACCCCCATTaGTCTGCTTCAAATCATTTCATTGGGTTAATGTTG | + |
|
Preference number: 4 (lower is better) Translates to: STSASPERSHPH*SASNHFIGLML Trigger: CAACATTAACCCAATGAAATGATTTGAAGCAGACAAATGGGGGTGAGACCTCTCTGGACTGGCAGAAGTAGA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000007799.13 ENSMUST00000115453.2 ENSMUST00000115456.6 |
||
| CDS-3UTR GCA 90 bp | TCTGCTTCAAATCATTTCATTGGGTTAATGTTGACCAGGCTTAACAGAGAGAAATGGGCTTGTAGATGTTaGCCTGTTCCCGGATGGGAA | + |
|
Preference number: 4 (lower is better) Translates to: SASNHFIGLMLTRLNREKWACRC*PVPGWE Trigger: TTCCCATCCGGGAACAGGGCAACATCTACAAGCCCA...TTTCTCTCTGTTAAGCCTGGTCAACATTAACCCAATGAAATGATTTGAAGCAGA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000007799.13 ENSMUST00000115456.6 |
||
| CDS-3UTR CCA 90 bp | TACATAGCTGAGCACAGATATCAACATCAACAGGTTCTGTATTTCAGAGTCAGACCAGGTCAATCTCCTTaGTGTGCGCGTCATACACTT | + |
|
Preference number: 4 (lower is better) Translates to: YIAEHRYQHQQVLYFRVRPGQSP*CARHTL Trigger: AAGTGTATGACGCGCACACCAAGGAGATTGACCTGG...TCTGACTCTGAAATACAGAACCTGTTGATGTTGATATCTGTGCTCAGCTATGTA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000007799.13 ENSMUST00000115453.2 ENSMUST00000115456.6 |
||
| CDS-3UTR GCA 90 bp | TTGTCTGCTTCAAATCATTTCATTGGGTTAATGTTGACCAGGCTTAACAGAGAGTCAATCTCCTTGGTGTaGGCGTCATACACTTGCTTC | + |
|
Preference number: 4 (lower is better) Translates to: LSASNHFIGLMLTRLNRESISLV*ASYTCF Trigger: GAAGCAAGTGTATGACGCGCACACCAAGGAGATTGA...CTCTCTGTTAAGCCTGGTCAACATTAACCCAATGAAATGATTTGAAGCAGACAA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000007799.13 ENSMUST00000115453.2 ENSMUST00000115456.6 |
||
| CDS-3UTR CCA 90 bp | AGAGAGGTCTCACCCCCATTTGTCTGCTTCAAATCATTTCATTGGGTTAATGTTAATAGCTTCAAAGAGTaGATCGCAGAAGGTATGGAC | + |
|
Preference number: 4 (lower is better) Translates to: REVSPPFVCFKSFHWVNVNSFKE*IAEGMD Trigger: GTCCATACCTTCTGCGATCCACTCTTTGAAGCTATT...AACATTAACCCAATGAAATGATTTGAAGCAGACAAATGGGGGTGAGACCTCTCT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000007799.13 ENSMUST00000115453.2 ENSMUST00000115456.6 |
||
| CDS-3UTR CCA 90 bp | TACATAGCTGAGCACAGATATCAACATCAACAGGTTCTGTATTTCAGAGTCAGAAATAGCTTCAAAGAGTaGATCGCAGAAGGTATGGAC | + |
|
Preference number: 4 (lower is better) Translates to: YIAEHRYQHQQVLYFRVRNSFKE*IAEGMD Trigger: GTCCATACCTTCTGCGATCCACTCTTTGAAGCTATT...TCTGACTCTGAAATACAGAACCTGTTGATGTTGATATCTGTGCTCAGCTATGTA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000007799.13 ENSMUST00000115453.2 ENSMUST00000115456.6 |
||
| 3UTR CAA 72 bp | TTCTTTGTTCTTGATCAAGACAAACCATTCATAAATTaGCTGCTGCGAGAGCAACTTGGAATTGGCACCAAG | + |
|
Preference number: 4 (lower is better) Translates to: FFVLDQDKPFIN*LLREQLGIGTK Trigger: CTTGGTGCCAATTCCAAGTTGCTCTCGCAGCAGCAAATTTATGAATGGTTTGTCTTGATCAAGAACAAAGAA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000007799.13 ENSMUST00000115453.2 |
||
| 3UTR CAA 72 bp | TTGATGGTGATCCCTAAATCCCTAAATCTAACTGGATaGTTAAGAGTGAGGACAGCAACCAATTCCTTAGAT | + |
|
Preference number: 4 (lower is better) Translates to: LMVIPKSLNLTG*LRVRTATNSLD Trigger: ATCTAAGGAATTGGTTGCTGTCCTCACTCTTAACAATCCAGTTAGATTTAGGGATTTAGGGATCACCATCAA 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000007799.13 ENSMUST00000115453.2 |
||
| 3UTR CAA 72 bp | TTGAATTTATTACAGCAAGAACATTACCTCAAGCTTTaGTTACCACCCTTCCCCCACCTTTCTGAACAAAAT | + |
|
Preference number: 4 (lower is better) Translates to: LNLLQQEHYLKL*LPPFPHLSEQN Trigger: ATTTTGTTCAGAAAGGTGGGGGAAGGGTGGTAACAAAAGCTTGAGGTAATGTTCTTGCTGTAATAAATTCAA 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000007799.13 ENSMUST00000115453.2 |
||
| 3UTR CAA 72 bp | AACATTGTTGGTATCATGAAGATTATAGTCTCCAAATaGATGGTGATCCCTAAATCCCTAAATCTAACTGGA | + |
|
Preference number: 4 (lower is better) Translates to: NIVGIMKIIVSK*MVIPKSLNLTG Trigger: TCCAGTTAGATTTAGGGATTTAGGGATCACCATCAATTTGGAGACTATAATCTTCATGATACCAACAATGTT 35% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000007799.13 ENSMUST00000115453.2 |
||
| CDS-3UTR CAA 90 bp | CTTGCCAGCAGGAAGAGGCAGGCAGATGCGACATTTCTGACACCAGACCCGCAGTCGTCGTTGAGATGCTaGGGGTCGCGGTTGACCAGG | + |
|
Preference number: 5 (lower is better) Translates to: LASRKRQADATFLTPDPQSSLRC*GSRLTR Trigger: CCTGGTCAACCGCGACCCCAAGCATCTCAACGACGA...CTGCGGGTCTGGTGTCAGAAATGTCGCATCTGCCTGCCTCTTCCTGCTGGCAAG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000150901.2 |
||
| CDS-3UTR CAA 90 bp | ACTTGCCAGCAGGAAGAGGCAGGCAGATGCGACATTTCTGACACCAGACCCGCATGCTTGGGGTCGCGGTaGACCAGGTCAATCTCCTTG | + |
|
Preference number: 5 (lower is better) Translates to: TCQQEEAGRCDISDTRPACLGSR*TRSISL Trigger: CAAGGAGATTGACCTGGTCAACCGCGACCCCAAGCA...TGCGGGTCTGGTGTCAGAAATGTCGCATCTGCCTGCCTCTTCCTGCTGGCAAGT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000150901.2 |
||
| CDS-3UTR CAA 90 bp | GGCCTCATTCAGTTGCTGAGTGGCAGGGAAAGCTGGCTTCTACTTCTGCCAGTCTCGTCGTTGAGATGCTaGGGGTCGCGGTTGACCAGG | + |
|
Preference number: 5 (lower is better) Translates to: GLIQLLSGRESWLLLLPVSSLRC*GSRLTR Trigger: CCTGGTCAACCGCGACCCCAAGCATCTCAACGACGA...GACTGGCAGAAGTAGAAGCCAGCTTTCCCTGCCACTCAGCAACTGAATGAGGCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000007799.13 ENSMUST00000115453.2 ENSMUST00000115456.6 |
||
| CDS-3UTR CAA 90 bp | GCTGAACTTGCCAGCAGGAAGAGGCAGGCAGATGCGACATTTCTGACACCAGACTTGACCACGTCGTCGTaGAGATGCTTGGGGTCGCGG | + |
|
Preference number: 5 (lower is better) Translates to: AELASRKRQADATFLTPDLTTSS*RCLGSR Trigger: CCGCGACCCCAAGCATCTCAACGACGACGTGGTCAA...GTCTGGTGTCAGAAATGTCGCATCTGCCTGCCTCTTCCTGCTGGCAAGTTCAGC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000150901.2 |
||
| CDS-3UTR CAA 90 bp | GCCAGCAGGAAGAGGCAGGCAGATGCGACATTTCTGACACCAGACCCGCAGGGGCTTGTCTGTCAAAGCTaGGGAGAGTACACTGTGGGA | + |
|
Preference number: 5 (lower is better) Translates to: ASRKRQADATFLTPDPQGLVCQS*GEYTVG Trigger: TCCCACAGTGTACTCTCCCAAGCTTTGACAGACAAG...CCCCTGCGGGTCTGGTGTCAGAAATGTCGCATCTGCCTGCCTCTTCCTGCTGGC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000150901.2 |
||
| CDS-3UTR CAA 90 bp | AAGCTGGCTTCTACTTCTGCCAGTCCAGAGAGGTCTCACCCCCATTTGTCTGCTTTGACCACGTCGTCGTaGAGATGCTTGGGGTCGCGG | + |
|
Preference number: 5 (lower is better) Translates to: KLASTSASPERSHPHLSALTTSS*RCLGSR Trigger: CCGCGACCCCAAGCATCTCAACGACGACGTGGTCAA...AGCAGACAAATGGGGGTGAGACCTCTCTGGACTGGCAGAAGTAGAAGCCAGCTT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000007799.13 ENSMUST00000115453.2 ENSMUST00000115456.6 |
||
| CDS GCA 90 bp | CAGTCACCTCGTCTGCCATGGCCTTGTTGTTGGGCTTGTAGATGTTaGCCTGTTCCCGGATGGGAACAGTGTAGAGATGTCCCTCGGAGT | + |
|
Preference number: 5 (lower is better) Translates to: QSPRLPWPCCWACRC*PVPGWEQCRDVPRS Trigger: ACTCCGAGGGACATCTCTACACTGTTCCCATCCGGGAACAGGGCAACATCTACAAGCCCAACAACAAGGCCATGGCAGACGAGGTGACTG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000007799.13 ENSMUST00000115456.6 ENSMUST00000150901.2 |
||
| CDS GCA 90 bp | CTCCTTGGTGTGCGCGTCATACACTTGCTTCTCAGTCACCTCGTCTaGCATGGCCTTGTTGTTGGGCTTGTAGATGTTGCCCTGTTCCCG | + |
|
Preference number: 5 (lower is better) Translates to: LLGVRVIHLLLSHLV*HGLVVGLVDVALFP Trigger: CGGGAACAGGGCAACATCTACAAGCCCAACAACAAGGCCATGGCAGACGAGGTGACTGAGAAGCAAGTGTATGACGCGCACACCAAGGAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000007799.13 ENSMUST00000115456.6 ENSMUST00000150901.2 |
||
| CDS GCA 90 bp | CTCCTTGGTGTGCGCGTCATACACTTGCTTCTCAGTCACCTCGTCTaGCATGGCCTTGTTGTTGGGCTTGTAGATGTTGCCCTCGGAGTC | + |
|
Preference number: 5 (lower is better) Translates to: LLGVRVIHLLLSHLV*HGLVVGLVDVALGV Trigger: GACTCCGAGGGCAACATCTACAAGCCCAACAACAAGGCCATGGCAGACGAGGTGACTGAGAAGCAAGTGTATGACGCGCACACCAAGGAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000115455.3 |
||
| CDS GCA 90 bp | CAGTCACCTCGTCTGCCATGGCCTTGTTGTTGGGCTTGTAGATGTTaGCCTGTTCCCGGATGGGAACAGTGTAGAGATGTCCCCAAGCCT | + |
|
Preference number: 5 (lower is better) Translates to: QSPRLPWPCCWACRC*PVPGWEQCRDVPKP Trigger: AGGCTTGGGGACATCTCTACACTGTTCCCATCCGGGAACAGGGCAACATCTACAAGCCCAACAACAAGGCCATGGCAGACGAGGTGACTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000177234.2 |
||
| CDS CCA 90 bp | TGGTGTGCGCGTCATACACTTGCTTCTCAGTCACCTCGTCTGCCATaGCCTTGTTGTTGGGCTTGTAGATGTTGCCCTGTTCCCGGATGG | + |
|
Preference number: 5 (lower is better) Translates to: WCARHTLASQSPRLP*PCCWACRCCPVPGW Trigger: CCATCCGGGAACAGGGCAACATCTACAAGCCCAACAACAAGGCCATGGCAGACGAGGTGACTGAGAAGCAAGTGTATGACGCGCACACCA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000007799.13 ENSMUST00000115456.6 ENSMUST00000150901.2 |
||
| CDS CCA 90 bp | CCATGGCCTTGTTGTTGGGCTTGTAGATGTTGCCCTGTTCCCGGATaGGAACAGTGTAGAGATGTCCCCAAGCCTACCTCGGAGTCTACG | + |
|
Preference number: 5 (lower is better) Translates to: PWPCCWACRCCPVPG*EQCRDVPKPTSEST Trigger: CGTAGACTCCGAGGTAGGCTTGGGGACATCTCTACACTGTTCCCATCCGGGAACAGGGCAACATCTACAAGCCCAACAACAAGGCCATGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000177234.2 |
||
| CDS-3UTR CAA 90 bp | CAGTTGCTGAGTGGCAGGGAAAGCTGGCTTCTACTTCTGCCAGTCCAGAGAGGTGTGCGCGTCATACACTaGCTTCTCAGTCACCTCGTC | + |
|
Preference number: 5 (lower is better) Translates to: QLLSGRESWLLLLPVQRGVRVIH*LLSHLV Trigger: GACGAGGTGACTGAGAAGCAAGTGTATGACGCGCAC...ACCTCTCTGGACTGGCAGAAGTAGAAGCCAGCTTTCCCTGCCACTCAGCAACTG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000007799.13 ENSMUST00000115453.2 ENSMUST00000115456.6 |
||
| CDS-3UTR CAA 90 bp | CCTGCTGAACTTGCCAGCAGGAAGAGGCAGGCAGATGCGACATTTCTGACACCAGTGCGCGTCATACACTaGCTTCTCAGTCACCTCGTC | + |
|
Preference number: 5 (lower is better) Translates to: PAELASRKRQADATFLTPVRVIH*LLSHLV Trigger: GACGAGGTGACTGAGAAGCAAGTGTATGACGCGCAC...TGGTGTCAGAAATGTCGCATCTGCCTGCCTCTTCCTGCTGGCAAGTTCAGCAGG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000150901.2 |
||
| CDS-3UTR CAA 90 bp | GGAAAGCTGGCTTCTACTTCTGCCAGTCCAGAGAGGTCTCACCCCCATTTGTCTTGCTTGGGGTCGCGGTaGACCAGGTCAATCTCCTTG | + |
|
Preference number: 5 (lower is better) Translates to: GKLASTSASPERSHPHLSCLGSR*TRSISL Trigger: CAAGGAGATTGACCTGGTCAACCGCGACCCCAAGCA...AGACAAATGGGGGTGAGACCTCTCTGGACTGGCAGAAGTAGAAGCCAGCTTTCC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000007799.13 ENSMUST00000115453.2 ENSMUST00000115456.6 |
||
| CDS CCA 90 bp | CCATGGCCTTGTTGTTGGGCTTGTAGATGTTGCCCTGTTCCCGGATaGGAACAGTGTAGAGATGTCCCTCGGAGTCTACGTATTTGCCCC | + |
|
Preference number: 5 (lower is better) Translates to: PWPCCWACRCCPVPG*EQCRDVPRSLRICP Trigger: GGGGCAAATACGTAGACTCCGAGGGACATCTCTACACTGTTCCCATCCGGGAACAGGGCAACATCTACAAGCCCAACAACAAGGCCATGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000007799.13 ENSMUST00000115456.6 ENSMUST00000150901.2 |
||
| CDS CCA 90 bp | TGGTGTGCGCGTCATACACTTGCTTCTCAGTCACCTCGTCTGCCATaGCCTTGTTGTTGGGCTTGTAGATGTTGCCCTCGGAGTCTACGT | + |
|
Preference number: 5 (lower is better) Translates to: WCARHTLASQSPRLP*PCCWACRCCPRSLR Trigger: ACGTAGACTCCGAGGGCAACATCTACAAGCCCAACAACAAGGCCATGGCAGACGAGGTGACTGAGAAGCAAGTGTATGACGCGCACACCA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000115455.3 |
||
| CDS-3UTR CAA 90 bp | GGAAAGCTGGCTTCTACTTCTGCCAGTCCAGAGAGGTCTCACCCCCATTTGTCTGTGCGCGTCATACACTaGCTTCTCAGTCACCTCGTC | + |
|
Preference number: 5 (lower is better) Translates to: GKLASTSASPERSHPHLSVRVIH*LLSHLV Trigger: GACGAGGTGACTGAGAAGCAAGTGTATGACGCGCAC...AGACAAATGGGGGTGAGACCTCTCTGGACTGGCAGAAGTAGAAGCCAGCTTTCC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000007799.13 ENSMUST00000115453.2 ENSMUST00000115456.6 |
||
| CDS-3UTR CAA 90 bp | CATTCAGTTGCTGAGTGGCAGGGAAAGCTGGCTTCTACTTCTGCCAGTCCAGAGTCAATCAGGAAGCTCTaGATGCACGGTACAACCGCC | + |
|
Preference number: 5 (lower is better) Translates to: HSVAEWQGKLASTSASPESIRKL*MHGTTA Trigger: GGCGGTTGTACCGTGCATCAAGAGCTTCCTGATTGA...CTCTGGACTGGCAGAAGTAGAAGCCAGCTTTCCCTGCCACTCAGCAACTGAATG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000007799.13 ENSMUST00000115453.2 ENSMUST00000115456.6 |
||
| CDS CCA 90 bp | CATACACTTGCTTCTCAGTCACCTCGTCTGCCATGGCCTTGTTGTTaGGCTTGTAGATGTTGCCCTGTTCCCGGATGGGAACAGTGTAGA | + |
|
Preference number: 5 (lower is better) Translates to: HTLASQSPRLPWPCC*ACRCCPVPGWEQCR Trigger: TCTACACTGTTCCCATCCGGGAACAGGGCAACATCTACAAGCCCAACAACAAGGCCATGGCAGACGAGGTGACTGAGAAGCAAGTGTATG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000007799.13 ENSMUST00000115456.6 ENSMUST00000150901.2 |
||
| CDS-3UTR CAA 90 bp | GCTGCCGGCATCATGCAAGTAGATGAGTTAGATCCTTTCATCCTTGAAATGTCCTTGACCACGTCGTCGTaGAGATGCTTGGGGTCGCGG | + |
|
Preference number: 5 (lower is better) Translates to: AAGIMQVDELDPFILEMSLTTSS*RCLGSR Trigger: CCGCGACCCCAAGCATCTCAACGACGACGTGGTCAA...GGACATTTCAAGGATGAAAGGATCTAACTCATCTACTTGCATGATGCCGGCAGC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000115456.6 |
||
| CDS CCA 90 bp | GCTGATGCGGATGTTGCTGAATATCTTGCCAATAGCTTCAAAGAGTaGATCGCAGAAGGTATGGACGTAGATGGAGTAGACGCGGCTGAT | + |
|
Preference number: 5 (lower is better) Translates to: ADADVAEYLANSFKE*IAEGMDVDGVDAAD Trigger: ATCAGCCGCGTCTACTCCATCTACGTCCATACCTTCTGCGATCCACTCTTTGAAGCTATTGGCAAGATATTCAGCAACATCCGCATCAGC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000007799.13 ENSMUST00000115453.2 ENSMUST00000115454.2 ENSMUST00000115456.6 |
||
| CDS-3UTR CAA 90 bp | CAACAGGTTCTGTATTTCAGAGTCAGAAACAAGTACAGAGAACTAGCAAGTGCATTGACCACGTCGTCGTaGAGATGCTTGGGGTCGCGG | + |
|
Preference number: 5 (lower is better) Translates to: QQVLYFRVRNKYRELASALTTSS*RCLGSR Trigger: CCGCGACCCCAAGCATCTCAACGACGACGTGGTCAA...TGCACTTGCTAGTTCTCTGTACTTGTTTCTGACTCTGAAATACAGAACCTGTTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000007799.13 ENSMUST00000115453.2 ENSMUST00000115456.6 |
||
| CDS-3UTR CAA 90 bp | CAACAGGTTCTGTATTTCAGAGTCAGAAACAAGTACAGAGAACTAGCAAGTGCATGCTTGGGGTCGCGGTaGACCAGGTCAATCTCCTTG | + |
|
Preference number: 5 (lower is better) Translates to: QQVLYFRVRNKYRELASACLGSR*TRSISL Trigger: CAAGGAGATTGACCTGGTCAACCGCGACCCCAAGCA...TGCACTTGCTAGTTCTCTGTACTTGTTTCTGACTCTGAAATACAGAACCTGTTG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000007799.13 ENSMUST00000115453.2 ENSMUST00000115456.6 |
||
| CDS-3UTR CAA 90 bp | TACATAGCTGAGCACAGATATCAACATCAACAGGTTCTGTATTTCAGAGTCAGATCGTCGTTGAGATGCTaGGGGTCGCGGTTGACCAGG | + |
|
Preference number: 5 (lower is better) Translates to: YIAEHRYQHQQVLYFRVRSSLRC*GSRLTR Trigger: CCTGGTCAACCGCGACCCCAAGCATCTCAACGACGA...TCTGACTCTGAAATACAGAACCTGTTGATGTTGATATCTGTGCTCAGCTATGTA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000007799.13 ENSMUST00000115453.2 ENSMUST00000115456.6 |
||
| CDS-3UTR CAA 90 bp | GAATTTATTACAGCAAGAACATTACCTCAAGCTTTTGTTACCACCCTTCCCCCAGTGCGCGTCATACACTaGCTTCTCAGTCACCTCGTC | + |
|
Preference number: 5 (lower is better) Translates to: EFITARTLPQAFVTTLPPVRVIH*LLSHLV Trigger: GACGAGGTGACTGAGAAGCAAGTGTATGACGCGCAC...TGGGGGAAGGGTGGTAACAAAAGCTTGAGGTAATGTTCTTGCTGTAATAAATTC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000007799.13 ENSMUST00000115453.2 |
||
| CDS-3UTR CAA 90 bp | TCTGCTTCAAATCATTTCATTGGGTTAATGTTGACCAGGCTTAACAGAGAGAAATCGTCGTTGAGATGCTaGGGGTCGCGGTTGACCAGG | + |
|
Preference number: 5 (lower is better) Translates to: SASNHFIGLMLTRLNREKSSLRC*GSRLTR Trigger: CCTGGTCAACCGCGACCCCAAGCATCTCAACGACGA...TTTCTCTCTGTTAAGCCTGGTCAACATTAACCCAATGAAATGATTTGAAGCAGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000007799.13 ENSMUST00000115453.2 ENSMUST00000115456.6 |
||
| CDS-3UTR CAA 90 bp | CAACAGGTTCTGTATTTCAGAGTCAGAAACAAGTACAGAGAACTAGCAAGTGCATCAATCAGGAAGCTCTaGATGCACGGTACAACCGCC | + |
|
Preference number: 5 (lower is better) Translates to: QQVLYFRVRNKYRELASASIRKL*MHGTTA Trigger: GGCGGTTGTACCGTGCATCAAGAGCTTCCTGATTGA...TGCACTTGCTAGTTCTCTGTACTTGTTTCTGACTCTGAAATACAGAACCTGTTG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000007799.13 ENSMUST00000115453.2 ENSMUST00000115456.6 |
||
| CDS-3UTR CAA 90 bp | CTCCTAAATCATCCCAGTCAGTCACTAAACCTTGATCCTGGTGAGGGGCTGGCTATGTTGCTGAATATCTaGCCAATAGCTTCAAAGAGT | + |
|
Preference number: 5 (lower is better) Translates to: LLNHPSQSLNLDPGEGLAMLLNI*PIASKS Trigger: ACTCTTTGAAGCTATTGGCAAGATATTCAGCAACAT...AGCCAGCCCCTCACCAGGATCAAGGTTTAGTGACTGACTGGGATGATTTAGGAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000007799.13 ENSMUST00000115453.2 |
||
| CDS-3UTR CAA 90 bp | CAGGTTCTGTATTTCAGAGTCAGAAACAAGTACAGAGAACTAGCAAGTGCAATTTCAATCAGGAAGCTCTaGATGCACGGTACAACCGCC | + |
|
Preference number: 5 (lower is better) Translates to: QVLYFRVRNKYRELASAISIRKL*MHGTTA Trigger: GGCGGTTGTACCGTGCATCAAGAGCTTCCTGATTGA...AATTGCACTTGCTAGTTCTCTGTACTTGTTTCTGACTCTGAAATACAGAACCTG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000007799.13 ENSMUST00000115453.2 ENSMUST00000115456.6 |
||
| CDS-3UTR CAA 90 bp | ACCAATTCCTTAGATAACTGGCATATATTAAAAACGTTCCTTCATGCCCCTAAAACCAGGTCAATCTCCTaGGTGTGCGCGTCATACACT | + |
|
Preference number: 5 (lower is better) Translates to: TNSLDNWHILKTFLHAPKTRSIS*VCASYT Trigger: AGTGTATGACGCGCACACCAAGGAGATTGACCTGGT...TTTAGGGGCATGAAGGAACGTTTTTAATATATGCCAGTTATCTAAGGAATTGGT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000007799.13 ENSMUST00000115453.2 |
||
| CDS-3UTR CAA 90 bp | TCCAGAGAGGTCTCACCCCCATTTGTCTGCTTCAAATCATTTCATTGGGTTAATATGTTGCTGAATATCTaGCCAATAGCTTCAAAGAGT | + |
|
Preference number: 5 (lower is better) Translates to: SREVSPPFVCFKSFHWVNMLLNI*PIASKS Trigger: ACTCTTTGAAGCTATTGGCAAGATATTCAGCAACAT...ATTAACCCAATGAAATGATTTGAAGCAGACAAATGGGGGTGAGACCTCTCTGGA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000007799.13 ENSMUST00000115453.2 ENSMUST00000115456.6 |
||
| CDS CAA 90 bp | GCTTGGGAGAGTACACTGTGGGACCCAGACAGCAACATGCTTACCTaGACCACGTCGTCGTTGAGATGCTTGGGGTCGCGGTTGACCAGG | + |
|
Preference number: 6 (lower is better) Translates to: AWESTLWDPDSNMLT*TTSSLRCLGSRLTR Trigger: CCTGGTCAACCGCGACCCCAAGCATCTCAACGACGACGTGGTCAAGGTAAGCATGTTGCTGTCTGGGTCCCACAGTGTACTCTCCCAAGC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000150901.2 |
||
| CDS CCA 72 bp | GCTTCTCAGTCACCTCGTCTGCCATGGCCTTGTTGTTaGGCTTGTAGATGTTGCCCTGTTCCCGGATGGGAA | + |
|
Preference number: 6 (lower is better) Translates to: ASQSPRLPWPCC*ACRCCPVPGWE Trigger: TTCCCATCCGGGAACAGGGCAACATCTACAAGCCCAACAACAAGGCCATGGCAGACGAGGTGACTGAGAAGC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000007799.13 ENSMUST00000115456.6 ENSMUST00000150901.2 |
||
| CDS GCA 72 bp | CGTCTGCCATGGCCTTGTTGTTGGGCTTGTAGATGTTaGCCTGTTCCCGGATGGGAACAGTGTAGAGATGTC | + |
|
Preference number: 6 (lower is better) Translates to: RLPWPCCWACRC*PVPGWEQCRDV Trigger: GACATCTCTACACTGTTCCCATCCGGGAACAGGGCAACATCTACAAGCCCAACAACAAGGCCATGGCAGACG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000007799.13 ENSMUST00000115456.6 ENSMUST00000150901.2 ENSMUST00000177234.2 |
||
| CDS GCA 72 bp | GTGCGCGTCATACACTTGCTTCTCAGTCACCTCGTCTaGCATGGCCTTGTTGTTGGGCTTGTAGATGTTGCC | + |
|
Preference number: 6 (lower is better) Translates to: VRVIHLLLSHLV*HGLVVGLVDVA Trigger: GGCAACATCTACAAGCCCAACAACAAGGCCATGGCAGACGAGGTGACTGAGAAGCAAGTGTATGACGCGCAC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000007799.13 ENSMUST00000115455.3 ENSMUST00000115456.6 ENSMUST00000150901.2 |
||
| CDS GCA 72 bp | ACCAGGTCAATCTCCTTGGTGTGCGCGTCATACACTTaGTTCTCAGTCACCTCGTCTGCCATGGCCTTGTTG | + |
|
Preference number: 6 (lower is better) Translates to: TRSISLVCASYT*FSVTSSAMALL Trigger: CAACAAGGCCATGGCAGACGAGGTGACTGAGAAGCAAGTGTATGACGCGCACACCAAGGAGATTGACCTGGT 54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000007799.13 ENSMUST00000115455.3 ENSMUST00000115456.6 ENSMUST00000150901.2 |
||
| CDS CCA 72 bp | CGTCATACACTTGCTTCTCAGTCACCTCGTCTGCCATaGCCTTGTTGTTGGGCTTGTAGATGTTGCCCTCGG | + |
|
Preference number: 6 (lower is better) Translates to: RHTLASQSPRLP*PCCWACRCCPR Trigger: CCGAGGGCAACATCTACAAGCCCAACAACAAGGCCATGGCAGACGAGGTGACTGAGAAGCAAGTGTATGACG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000115455.3 |
||
| CDS CCA 72 bp | TGTTGTTGGGCTTGTAGATGTTGCCCTGTTCCCGGATaGGAACAGTGTAGAGATGTCCCCAAGCCTACCTCG | + |
|
Preference number: 6 (lower is better) Translates to: CCWACRCCPVPG*EQCRDVPKPTS Trigger: CGAGGTAGGCTTGGGGACATCTCTACACTGTTCCCATCCGGGAACAGGGCAACATCTACAAGCCCAACAACA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000177234.2 |
||
| CDS CCA 72 bp | TGTTGTTGGGCTTGTAGATGTTGCCCTGTTCCCGGATaGGAACAGTGTAGAGATGTCCCTCGGAGTCTACGT | + |
|
Preference number: 6 (lower is better) Translates to: CCWACRCCPVPG*EQCRDVPRSLR Trigger: ACGTAGACTCCGAGGGACATCTCTACACTGTTCCCATCCGGGAACAGGGCAACATCTACAAGCCCAACAACA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000007799.13 ENSMUST00000115456.6 ENSMUST00000150901.2 |
||
| CDS CCA 72 bp | GCTTCTCAGTCACCTCGTCTGCCATGGCCTTGTTGTTaGGCTTGTAGATGTTGCCCTCGGAGTCTACGTATT | + |
|
Preference number: 6 (lower is better) Translates to: ASQSPRLPWPCC*ACRCCPRSLRI Trigger: AATACGTAGACTCCGAGGGCAACATCTACAAGCCCAACAACAAGGCCATGGCAGACGAGGTGACTGAGAAGC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000115455.3 |
||
| CDS CCA 72 bp | CGTCATACACTTGCTTCTCAGTCACCTCGTCTGCCATaGCCTTGTTGTTGGGCTTGTAGATGTTGCCCTGTT | + |
|
Preference number: 6 (lower is better) Translates to: RHTLASQSPRLP*PCCWACRCCPV Trigger: AACAGGGCAACATCTACAAGCCCAACAACAAGGCCATGGCAGACGAGGTGACTGAGAAGCAAGTGTATGACG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000007799.13 ENSMUST00000115456.6 ENSMUST00000150901.2 |
||
| CDS CAA 72 bp | TCTTTCTGCGTGCTGATGCGGATGTTGCTGAATATCTaGCCAATAGCTTCAAAGAGTGGATCGCAGAAGGTA | + |
|
Preference number: 6 (lower is better) Translates to: SFCVLMRMLLNI*PIASKSGSQKV Trigger: TACCTTCTGCGATCCACTCTTTGAAGCTATTGGCAAGATATTCAGCAACATCCGCATCAGCACGCAGAAAGA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000007799.13 ENSMUST00000115453.2 ENSMUST00000115454.2 ENSMUST00000115456.6 |
||
| CDS CCA 72 bp | GATGTTGCTGAATATCTTGCCAATAGCTTCAAAGAGTaGATCGCAGAAGGTATGGACGTAGATGGAGTAGAC | + |
|
Preference number: 6 (lower is better) Translates to: DVAEYLANSFKE*IAEGMDVDGVD Trigger: GTCTACTCCATCTACGTCCATACCTTCTGCGATCCACTCTTTGAAGCTATTGGCAAGATATTCAGCAACATC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000007799.13 ENSMUST00000115453.2 ENSMUST00000115454.2 ENSMUST00000115456.6 |
||