Pregenerated sensors for CATSPERG2 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000049123Ensembl transcript IDs: ENSMUST00000061193.4, ENSMUST00000207115.2, ENSMUST00000208371.2, ENSMUST00000208607.2, ENSMUST00000209126.2
Found 253 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
Type | Sensor | Details |
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3UTR TCA 90 bp | GGAGGTGGCAGGCTGCATTCCCATGAGGAGAGGCCTAAGGGTTCATaGGGAAGAGTACAGACCAGGGACTCAGGCCACCTATGCTGTCTT | + |
Preference number: 1 (lower is better) Translates to: GGGRLHSHEERPKGS*GRVQTRDSGHLCCL Trigger: AAGACAGCATAGGTGGCCTGAGTCCCTGGTCTGTACTCTTCCTCATGAACCCTTAGGCCTCTCCTCATGGGAATGCAGCCTGCCACCTCC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000208607.2 |
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3UTR TCA 90 bp | CCAGCGGGCTGTTGTAACGGAAGATTTCTTCCTCCGTGTAGTCTCTaGTGGTGTTCAGTGTGCGACCACCACCCACCACCTTCAGCACAT | + |
Preference number: 1 (lower is better) Translates to: PAGCCNGRFLPPCSL*WCSVCDHHPPPSAH Trigger: ATGTGCTGAAGGTGGTGGGTGGTGGTCGCACACTGAACACCATCAGAGACTACACGGAGGAAGAAATCTTCCGTTACAACAGCCCGCTGG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000208607.2 |
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3UTR GCA 90 bp | TGCGACCACCACCCACCACCTTCAGCACATAACTGCCCAAGAAACTaGCAGAGTCGCCAGTCACCAAGTCTTGGACTAAGAAGAAGGGCT | + |
Preference number: 1 (lower is better) Translates to: CDHHPPPSAHNCPRN*QSRQSPSLGLRRRA Trigger: AGCCCTTCTTCTTAGTCCAAGACTTGGTGACTGGCGACTCTGGCAGTTTCTTGGGCAGTTATGTGCTGAAGGTGGTGGGTGGTGGTCGCA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000208607.2 |
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3UTR GCA 90 bp | TGGTGTTCAGTGTGCGACCACCACCCACCACCTTCAGCACATAACTaGCCAAGAAACTGCCAGAGTCGCCAGTCACCAAGTCTTGGACTA | + |
Preference number: 1 (lower is better) Translates to: WCSVCDHHPPPSAHN*PRNCQSRQSPSLGL Trigger: TAGTCCAAGACTTGGTGACTGGCGACTCTGGCAGTTTCTTGGGCAGTTATGTGCTGAAGGTGGTGGGTGGTGGTCGCACACTGAACACCA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000208607.2 |
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3UTR GCA 90 bp | CATGAACATTCTAGCAAACCAGAAAGTCCTGGGGAGGTGGCAGGCTaGATTCCCATGAGGAGAGGCCTAAGGGTTCATGAGGAAGAGTAC | + |
Preference number: 1 (lower is better) Translates to: HEHSSKPESPGEVAG*IPMRRGLRVHEEEY Trigger: GTACTCTTCCTCATGAACCCTTAGGCCTCTCCTCATGGGAATGCAGCCTGCCACCTCCCCAGGACTTTCTGGTTTGCTAGAATGTTCATG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000061193.4 ENSMUST00000208607.2 |
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3UTR GCA 90 bp | TGTCACAGCAATTGCCAGCTTCTTATCCACATTAATAGTGGGTCCTaGAGGGTTGGGGTGTGGGGCTTGATGCCTGATACCTACATCCCA | + |
Preference number: 1 (lower is better) Translates to: CHSNCQLLIHINSGS*RVGVWGLMPDTYIP Trigger: TGGGATGTAGGTATCAGGCATCAAGCCCCACACCCCAACCCTGCAGGACCCACTATTAATGTGGATAAGAAGCTGGCAATTGCTGTGACA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000208607.2 |
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3UTR CCA 90 bp | GACATCAAAGGCCAAGCGCTTGCCAGGCGGACAGCCGATGAATATTaGTACCACTTTGAAACCTTGAATAATTCCCCCAAGGTACGTGCG | + |
Preference number: 1 (lower is better) Translates to: DIKGQALARRTADEY*YHFETLNNSPKVRA Trigger: CGCACGTACCTTGGGGGAATTATTCAAGGTTTCAAAGTGGTACCAATATTCATCGGCTGTCCGCCTGGCAAGCGCTTGGCCTTTGATGTC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000208607.2 |
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3UTR CCA 90 bp | CCAGATGAGGCTATTCGTTCTATGCAGGCCCATATAAAGTCAAAGTaGGTTGAGAGCAGAAATAGTTCTCAGCACCTAAGGGTGGGGACC | + |
Preference number: 1 (lower is better) Translates to: PDEAIRSMQAHIKSK*VESRNSSQHLRVGT Trigger: GGTCCCCACCCTTAGGTGCTGAGAACTATTTCTGCTCTCAACCCACTTTGACTTTATATGGGCCTGCATAGAACGAATAGCCTCATCTGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000207115.2 ENSMUST00000208607.2 |
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3UTR CCA 90 bp | AATCTGAGAGAAGGGATGGAACACACAGTCGCGAAAGAGGAAGCATaGCATCTCGGCGTCTTTAATCACACAGTCGAAATAGTGCTTGTT | + |
Preference number: 1 (lower is better) Translates to: NLREGMEHTVAKEEA*HLGVFNHTVEIVLV Trigger: AACAAGCACTATTTCGACTGTGTGATTAAAGACGCCGAGATGCCATGCTTCCTCTTTCGCGACTGTGTGTTCCATCCCTTCTCTCAGATT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000208607.2 |
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3UTR-3UTR CCA 90 bp | CACTATGTGAGGCCACACGAGGCAGAACAGGATGTAGAAGACAACCAGGGCTATCACAGCCACCAACTGTaGACTGGGGTCCCCAAGGGA | + |
Preference number: 2 (lower is better) Translates to: HYVRPHEAEQDVEDNQGYHSHQL*TGVPKG Trigger: TCCCTTGGGGACCCCAGTCCACAGTTGGTGGCTGTG...ATAGCCCTGGTTGTCTTCTACATCCTGTTCTGCCTCGTGTGGCCTCACATAGTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000208371.2 |
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3UTR-3UTR TCA 90 bp | GTCGGCTCTCTCTTTAGATCTCATGAGGCCTGGGGATCAAACCCAGGTTGTCAGGGACGTGAGCCTTTCTaGGGACTCGGGACTGATTCT | + |
Preference number: 2 (lower is better) Translates to: VGSLFRSHEAWGSNPGCQGREPF*GLGTDS Trigger: AGAATCAGTCCCGAGTCCTCAGAAAGGCTCACGTCC...CTGACAACCTGGGTTTGATCCCCAGGCCTCATGAGATCTAAAGAGAGAGCCGAC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000061193.4 ENSMUST00000208607.2 |
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3UTR-3UTR CCA 90 bp | CACAGAGTCGGCTCTCTCTTTAGATCTCATGAGGCCTGGGGATCAAACCCAGGTCAAACCAGAAAGTCCTaGGGAGGTGGCAGGCTGCAT | + |
Preference number: 2 (lower is better) Translates to: HRVGSLFRSHEAWGSNPGQTRKS*GGGRLH Trigger: ATGCAGCCTGCCACCTCCCCAGGACTTTCTGGTTTG...ACCTGGGTTTGATCCCCAGGCCTCATGAGATCTAAAGAGAGAGCCGACTCTGTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000061193.4 ENSMUST00000208607.2 |
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3UTR-3UTR CCA 90 bp | TCCTCGGTGGTCCTTTCGACCTTTGTTTTCCAGATGAGGCTATTCGTTCTATGCTGGGTCCTGCAGGGTTaGGGTGTGGGGCTTGATGCC | + |
Preference number: 2 (lower is better) Translates to: SSVVLSTFVFQMRLFVLCWVLQG*GVGLDA Trigger: GGCATCAAGCCCCACACCCCAACCCTGCAGGACCCA...GCATAGAACGAATAGCCTCATCTGGAAAACAAAGGTCGAAAGGACCACCGAGGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000208607.2 |
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3UTR-3UTR TCA 90 bp | AGACCCAGGCCTTCACTATGTGAGGCCACACGAGGCAGAACAGGATGTAGAAGACTGAGTCACAGTTACTaGAAGGCACTCAGGATCCGC | + |
Preference number: 2 (lower is better) Translates to: RPRPSLCEATRGRTGCRRLSHSY*KALRIR Trigger: GCGGATCCTGAGTGCCTTTCAGTAACTGTGACTCAG...TCTTCTACATCCTGTTCTGCCTCGTGTGGCCTCACATAGTGAAGGCCTGGGTCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000208607.2 |
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3UTR-3UTR GCA 90 bp | GACCAGACCCACCAACTGTGGACTGGGGTCCCCAAGGGATTACGTGTCCAGCGGGAGAGCTCCTTTATCTaGTGTGCCATCTTGAAAATA | + |
Preference number: 2 (lower is better) Translates to: DQTHQLWTGVPKGLRVQRESSFI*CAILKI Trigger: TATTTTCAAGATGGCACAGCAGATAAAGGAGCTCTC...CCGCTGGACACGTAATCCCTTGGGGACCCCAGTCCACAGTTGGTGGGTCTGGTC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000208607.2 |
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3UTR CAA 90 bp | CCAAGGTACGTGCGCTGGATGCAATTCCCAGGAGCGCCCAAGACCTaGAGCATCATAGAAGTCTTCTTGATGTTACGTCCAATCATGCCC | + |
Preference number: 2 (lower is better) Translates to: PRYVRWMQFPGAPKT*SIIEVFLMLRPIMP Trigger: GGGCATGATTGGACGTAACATCAAGAAGACTTCTATGATGCTCAAGGTCTTGGGCGCTCCTGGGAATTGCATCCAGCGCACGTACCTTGG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000208607.2 |
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3UTR-3UTR CCA 90 bp | AAGACAACCAGGGCTATAAAGAAGCTGGTAGACACCATAACAATGAAGGAGGTCCAGACCCACCAACTGTaGACTGGGGTCCCCAAGGGA | + |
Preference number: 2 (lower is better) Translates to: KTTRAIKKLVDTITMKEVQTHQL*TGVPKG Trigger: TCCCTTGGGGACCCCAGTCCACAGTTGGTGGGTCTG...GACCTCCTTCATTGTTATGGTGTCTACCAGCTTCTTTATAGCCCTGGTTGTCTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000207115.2 ENSMUST00000208607.2 |
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3UTR-3UTR GCA 90 bp | CACAGAGTCGGCTCTCTCTTTAGATCTCATGAGGCCTGGGGATCAAACCCAGGTTGTTACGTCCAATCATaGCCTGTTCAGAGCATCTCT | + |
Preference number: 2 (lower is better) Translates to: HRVGSLFRSHEAWGSNPGCYVQS*PVQSIS Trigger: AGAGATGCTCTGAACAGGGCATGATTGGACGTAACA...ACCTGGGTTTGATCCCCAGGCCTCATGAGATCTAAAGAGAGAGCCGACTCTGTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000208607.2 |
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3UTR-3UTR CCA 90 bp | GCAGAACAGGATGTAGAAGACAACCAGGGCTATAAAGAAGCTGGTAGACACCATCAAACCAGAAAGTCCTaGGGAGGTGGCAGGCTGCAT | + |
Preference number: 2 (lower is better) Translates to: AEQDVEDNQGYKEAGRHHQTRKS*GGGRLH Trigger: ATGCAGCCTGCCACCTCCCCAGGACTTTCTGGTTTG...ATGGTGTCTACCAGCTTCTTTATAGCCCTGGTTGTCTTCTACATCCTGTTCTGC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000208607.2 |
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3UTR-3UTR CCA 90 bp | ACAAGTGAGGGAGGGCAAAATGGCCAGGACAGGAGGGCACTAAATCTGAGAGAAGCGAAAGAGGAAGCATaGCATCTCGGCGTCTTTAAT | + |
Preference number: 2 (lower is better) Translates to: TSEGGQNGQDRRALNLREAKEEA*HLGVFN Trigger: ATTAAAGACGCCGAGATGCCATGCTTCCTCTTTCGC...TTCTCTCAGATTTAGTGCCCTCCTGTCCTGGCCATTTTGCCCTCCCTCACTTGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000208607.2 |
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3UTR-3UTR CCA 90 bp | GGTCCCCAAGGGATTACGTGTCCAGCGGGCTGTTGTAACGGAAGATTTCTTCCTACTAAGAAGAAGGGCTaGAATACTGTGGGTTGGGAA | + |
Preference number: 2 (lower is better) Translates to: GPQGITCPAGCCNGRFLPTKKKG*NTVGWE Trigger: TTCCCAACCCACAGTATTCCAGCCCTTCTTCTTAGT...AGGAAGAAATCTTCCGTTACAACAGCCCGCTGGACACGTAATCCCTTGGGGACC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000208607.2 |
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3UTR-3UTR TCA 90 bp | TCCTCAAGGCCAGTGTTGAGGTCAGAGGACAGCTTCACAGAGTCGGCTCTCTCTGGCTTTATTAGGGTCTaGATGAGACATGAACATTCT | + |
Preference number: 2 (lower is better) Translates to: SSRPVLRSEDSFTESALSGFIRV*MRHEHS Trigger: AGAATGTTCATGTCTCATTCAGACCCTAATAAAGCC...AGAGAGAGCCGACTCTGTGAAGCTGTCCTCTGACCTCAACACTGGCCTTGAGGA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000061193.4 ENSMUST00000208607.2 |
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3UTR-3UTR CCA 90 bp | GTGCTATTGTCTACACCTCTATTGCTCACTAACAACTTGAAGAAGAACTCAGGTTGGGGACCTAGTGGGTaGGGCAGGATTGTGGAACCC | + |
Preference number: 2 (lower is better) Translates to: VLLSTPLLLTNNLKKNSGWGPSG*GRIVEP Trigger: GGGTTCCACAATCCTGCCCCACCCACTAGGTCCCCA...ACCTGAGTTCTTCTTCAAGTTGTTAGTGAGCAATAGAGGTGTAGACAATAGCAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000207115.2 ENSMUST00000208607.2 |
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3UTR-3UTR TCA 90 bp | AGAGTCGGCTCTCTCTTTAGATCTCATGAGGCCTGGGGATCAAACCCAGGTTGTTTAAGAAGGACATCCTaGGTCACAGTTACTGAAAGG | + |
Preference number: 2 (lower is better) Translates to: RVGSLFRSHEAWGSNPGCLRRTS*VTVTER Trigger: CCTTTCAGTAACTGTGACTCAGGATGTCCTTCTTAA...ACAACCTGGGTTTGATCCCCAGGCCTCATGAGATCTAAAGAGAGAGCCGACTCT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000208607.2 |
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3UTR-3UTR GCA 90 bp | CTTCACAGAGTCGGCTCTCTCTTTAGATCTCATGAGGCCTGGGGATCAAACCCAGAGAGCTCCTTTATCTaGTGTGCCATCTTGAAAATA | + |
Preference number: 2 (lower is better) Translates to: LHRVGSLFRSHEAWGSNPESSFI*CAILKI Trigger: TATTTTCAAGATGGCACAGCAGATAAAGGAGCTCTC...TGGGTTTGATCCCCAGGCCTCATGAGATCTAAAGAGAGAGCCGACTCTGTGAAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000061193.4 ENSMUST00000208607.2 |
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3UTR CAA 90 bp | CAATTCCCAGGAGCGCCCAAGACCTTGAGCATCATAGAAGTCTTCTaGATGTTACGTCCAATCATGCCCTGTTCAGAGCATCTCTTTTTA | + |
Preference number: 2 (lower is better) Translates to: QFPGAPKTLSIIEVF*MLRPIMPCSEHLFL Trigger: TAAAAAGAGATGCTCTGAACAGGGCATGATTGGACGTAACATCAAGAAGACTTCTATGATGCTCAAGGTCTTGGGCGCTCCTGGGAATTG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000208607.2 |
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3UTR-3UTR CCA 90 bp | GTGCTATTGTCTACACCTCTATTGCTCACTAACAACTTGAAGAAGAACTCAGGTGGTGGGGCAGGATTGTaGAACCCTAGGCATTACTGT | + |
Preference number: 2 (lower is better) Translates to: VLLSTPLLLTNNLKKNSGGGAGL*NPRHYC Trigger: ACAGTAATGCCTAGGGTTCCACAATCCTGCCCCACC...ACCTGAGTTCTTCTTCAAGTTGTTAGTGAGCAATAGAGGTGTAGACAATAGCAC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000207115.2 ENSMUST00000208607.2 |
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3UTR-3UTR TCA 90 bp | TGTCTTAGCTTGAACATTGTCCTCTTTCGAACCAGCTCTGGAGGGACCCTCAAAGGCTTTATTAGGGTCTaGATGAGACATGAACATTCT | + |
Preference number: 2 (lower is better) Translates to: CLSLNIVLFRTSSGGTLKGFIRV*MRHEHS Trigger: AGAATGTTCATGTCTCATTCAGACCCTAATAAAGCC...TTTGAGGGTCCCTCCAGAGCTGGTTCGAAAGAGGACAATGTTCAAGCTAAGACA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000208607.2 |
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3UTR-3UTR TCA 90 bp | GCCATCTTGAAAATAAAAGATTCTGACATTCTGACAGTTAACTACAGCTGTGCTGGACGTGAGCCTTTCTaGGGACTCGGGACTGATTCT | + |
Preference number: 2 (lower is better) Translates to: AILKIKDSDILTVNYSCAGREPF*GLGTDS Trigger: AGAATCAGTCCCGAGTCCTCAGAAAGGCTCACGTCC...AGCACAGCTGTAGTTAACTGTCAGAATGTCAGAATCTTTTATTTTCAAGATGGC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000061193.4 ENSMUST00000208607.2 |
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3UTR-3UTR TCA 90 bp | GCCATCTTGAAAATAAAAGATTCTGACATTCTGACAGTTAACTACAGCTGTGCTTTGGGGTGTGGGGCTTaGTGCCTGATACCTACATCC | + |
Preference number: 2 (lower is better) Translates to: AILKIKDSDILTVNYSCALGCGA*CLIPTS Trigger: GGATGTAGGTATCAGGCATCAAGCCCCACACCCCAA...AGCACAGCTGTAGTTAACTGTCAGAATGTCAGAATCTTTTATTTTCAAGATGGC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENSMUST00000208607.2 |
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3UTR CAA 90 bp | ACCCAGGTTGTCAGGCTTGAGAGCTCCTTTATCTGCTGTGCCATCTaGAAAATAAAAGATTCTGACATTCTGACAGTTAACTACAGCTGT | + |
Preference number: 2 (lower is better) Translates to: TQVVRLESSFICCAI*KIKDSDILTVNYSC Trigger: ACAGCTGTAGTTAACTGTCAGAATGTCAGAATCTTTTATTTTCAAGATGGCACAGCAGATAAAGGAGCTCTCAAGCCTGACAACCTGGGT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000061193.4 ENSMUST00000208607.2 |
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3UTR TCA 72 bp | TCTTTCGAACCAGCTCTGGAGGGACCCTCAAAACTGTaGGACTGGAGGCTGAAGCCCGCAGTAGAGGAGGCA | + |
Preference number: 3 (lower is better) Translates to: SFEPALEGPSKL*DWRLKPAVEEA Trigger: TGCCTCCTCTACTGCGGGCTTCAGCCTCCAGTCTCACAGTTTTGAGGGTCCCTCCAGAGCTGGTTCGAAAGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000208607.2 |
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3UTR-3UTR CAA 90 bp | AGAGGCCTAAGGGTTCATGAGGAAGAGTACAGACCAGGGACTCAGGCCACCTATAAAGTGCTGGTGCTGTaGTGGGAGGGGACAAGTGAG | + |
Preference number: 3 (lower is better) Translates to: RGLRVHEEEYRPGTQATYKVLVL*WEGTSE Trigger: CTCACTTGTCCCCTCCCACAACAGCACCAGCACTTT...ATAGGTGGCCTGAGTCCCTGGTCTGTACTCTTCCTCATGAACCCTTAGGCCTCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000208607.2 |
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3UTR TCA 72 bp | AGACCAGGGACTCAGGCCACCTATGCTGTCTTAGCTTaGACATTGTCCTCTTTCGAACCAGCTCTGGAGGGA | + |
Preference number: 3 (lower is better) Translates to: RPGTQATYAVLA*TLSSFEPALEG Trigger: TCCCTCCAGAGCTGGTTCGAAAGAGGACAATGTTCAAGCTAAGACAGCATAGGTGGCCTGAGTCCCTGGTCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000208607.2 |
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3UTR-3UTR CAA 90 bp | TGTCTTAGCTTGAACATTGTCCTCTTTCGAACCAGCTCTGGAGGGACCCTCAAATCCTCAAGGCCAGTGTaGAGGTCAGAGGACAGCTTC | + |
Preference number: 3 (lower is better) Translates to: CLSLNIVLFRTSSGGTLKSSRPV*RSEDSF Trigger: GAAGCTGTCCTCTGACCTCAACACTGGCCTTGAGGA...TTTGAGGGTCCCTCCAGAGCTGGTTCGAAAGAGGACAATGTTCAAGCTAAGACA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000208607.2 |
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3UTR TCA 72 bp | CTGTGCTGGTACAAACCAAGCGGACGTGAGCCTTTCTaGGGACTCGGGACTGATTCTGAAAGGAGGCTTTAT | + |
Preference number: 3 (lower is better) Translates to: LCWYKPSGREPF*GLGTDSERRLY Trigger: ATAAAGCCTCCTTTCAGAATCAGTCCCGAGTCCTCAGAAAGGCTCACGTCCGCTTGGTTTGTACCAGCACAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000061193.4 ENSMUST00000208607.2 |
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3UTR TCA 72 bp | TGTTGTAACGGAAGATTTCTTCCTCCGTGTAGTCTCTaGTGGTGTTCAGTGTGCGACCACCACCCACCACCT | + |
Preference number: 3 (lower is better) Translates to: CCNGRFLPPCSL*WCSVCDHHPPP Trigger: AGGTGGTGGGTGGTGGTCGCACACTGAACACCATCAGAGACTACACGGAGGAAGAAATCTTCCGTTACAACA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000208607.2 |
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3UTR GCA 72 bp | AATTGCCAGCTTCTTATCCACATTAATAGTGGGTCCTaGAGGGTTGGGGTGTGGGGCTTGATGCCTGATACC | + |
Preference number: 3 (lower is better) Translates to: NCQLLIHINSGS*RVGVWGLMPDT Trigger: GGTATCAGGCATCAAGCCCCACACCCCAACCCTGCAGGACCCACTATTAATGTGGATAAGAAGCTGGCAATT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000208607.2 |
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3UTR-3UTR CAA 90 bp | GACAACCAGGGCTATAAAGAAGCTGGTAGACACCATAACAATGAAGGAGGTCCGCCCAGGTTGTCAGGCTaGAGAGCTCCTTTATCTGCT | + |
Preference number: 3 (lower is better) Translates to: DNQGYKEAGRHHNNEGGPPRLSG*RAPLSA Trigger: AGCAGATAAAGGAGCTCTCAAGCCTGACAACCTGGG...CGGACCTCCTTCATTGTTATGGTGTCTACCAGCTTCTTTATAGCCCTGGTTGTC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000208607.2 |
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3UTR TCA 72 bp | CATGAGGCCTGGGGATCAAACCCAGGTTGTCAGGCTTaGGAGCTCCTTTATCTGCTGTGCCATCTTGAAAAT | + |
Preference number: 3 (lower is better) Translates to: HEAWGSNPGCQA*ELLYLLCHLEN Trigger: ATTTTCAAGATGGCACAGCAGATAAAGGAGCTCTCAAGCCTGACAACCTGGGTTTGATCCCCAGGCCTCATG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000061193.4 ENSMUST00000208607.2 |
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3UTR-3UTR CAA 90 bp | TTAGATCTCATGAGGCCTGGGGATCAAACCCAGGTTGTCAGGCTTGAGAGCTCCCTATTGTCACAGCAATaGCCAGCTTCTTATCCACAT | + |
Preference number: 3 (lower is better) Translates to: LDLMRPGDQTQVVRLESSLLSQQ*PASYPH Trigger: ATGTGGATAAGAAGCTGGCAATTGCTGTGACAATAG...GGAGCTCTCAAGCCTGACAACCTGGGTTTGATCCCCAGGCCTCATGAGATCTAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000208607.2 |
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3UTR-3UTR CAA 90 bp | CTCAAGGCCAGTGTTGAGGTCAGAGGACAGCTTCACAGAGTCGGCTCTCTCTTTTCTATGACTTTAATCTaGTTGATCACTGCGTTGCGA | + |
Preference number: 3 (lower is better) Translates to: LKASVEVRGQLHRVGSLFSMTLI*LITALR Trigger: TCGCAACGCAGTGATCAACAAGATTAAAGTCATAGA...AAAGAGAGAGCCGACTCTGTGAAGCTGTCCTCTGACCTCAACACTGGCCTTGAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000208607.2 |
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3UTR-3UTR CAA 90 bp | TGTCTTAGCTTGAACATTGTCCTCTTTCGAACCAGCTCTGGAGGGACCCTCAAAAGGTGGGTAGATGCTTaGGGGGATGATGTCATAACA | + |
Preference number: 3 (lower is better) Translates to: CLSLNIVLFRTSSGGTLKRWVDA*GDDVIT Trigger: TGTTATGACATCATCCCCCAAAGCATCTACCCACCT...TTTGAGGGTCCCTCCAGAGCTGGTTCGAAAGAGGACAATGTTCAAGCTAAGACA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000208607.2 |
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3UTR TCA 72 bp | TGTCCTCGGTGGTCCTTTCGACCTTTGTTTTCCAGATaGGGCTATTCGTTCTATGCAGGCCCATATAAAGTC | + |
Preference number: 3 (lower is better) Translates to: CPRWSFRPLFSR*GYSFYAGPYKV Trigger: GACTTTATATGGGCCTGCATAGAACGAATAGCCTCATCTGGAAAACAAAGGTCGAAAGGACCACCGAGGACA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000207115.2 ENSMUST00000208607.2 |
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3UTR-3UTR CAA 90 bp | AGGTCAGAGGACAGCTTCACAGAGTCGGCTCTCTCTTTAGATCTCATGAGGCCTATCTGCTGTGCCATCTaGAAAATAAAAGATTCTGAC | + |
Preference number: 3 (lower is better) Translates to: RSEDSFTESALSLDLMRPICCAI*KIKDSD Trigger: GTCAGAATCTTTTATTTTCAAGATGGCACAGCAGAT...AGGCCTCATGAGATCTAAAGAGAGAGCCGACTCTGTGAAGCTGTCCTCTGACCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000061193.4 ENSMUST00000208607.2 |
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3UTR TCA 72 bp | GTTGCGATTAAGAAGGACATCCTGAGTCACAGTTACTaGAAGGCACTCAGGATCCGCTATTGTCACAGCAAT | + |
Preference number: 3 (lower is better) Translates to: VAIKKDILSHSY*KALRIRYCHSN Trigger: ATTGCTGTGACAATAGCGGATCCTGAGTGCCTTTCAGTAACTGTGACTCAGGATGTCCTTCTTAATCGCAAC 46% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000208607.2 |
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3UTR-3UTR CAA 90 bp | GACAACCAGGGCTATAAAGAAGCTGGTAGACACCATAACAATGAAGGAGGTCCGATCTGCTGTGCCATCTaGAAAATAAAAGATTCTGAC | + |
Preference number: 3 (lower is better) Translates to: DNQGYKEAGRHHNNEGGPICCAI*KIKDSD Trigger: GTCAGAATCTTTTATTTTCAAGATGGCACAGCAGAT...CGGACCTCCTTCATTGTTATGGTGTCTACCAGCTTCTTTATAGCCCTGGTTGTC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000208607.2 |
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3UTR GCA 72 bp | CAAACCCAGGTTGTCAGGCTTGAGAGCTCCTTTATCTaGTGTGCCATCTTGAAAATAAAAGATTCTGACATT | + |
Preference number: 3 (lower is better) Translates to: QTQVVRLESSFI*CAILKIKDSDI Trigger: AATGTCAGAATCTTTTATTTTCAAGATGGCACAGCAGATAAAGGAGCTCTCAAGCCTGACAACCTGGGTTTG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000061193.4 ENSMUST00000208607.2 |
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3UTR-3UTR CAA 90 bp | AAGCAAAAGGTTTATTTTCCAGCATGTCAGGGTCAACCTTCAATTAGTTCCTCAATCATAGAAGTCTTCTaGATGTTACGTCCAATCATG | + |
Preference number: 3 (lower is better) Translates to: KQKVYFPACQGQPSISSSIIEVF*MLRPIM Trigger: CATGATTGGACGTAACATCAAGAAGACTTCTATGAT...TGAGGAACTAATTGAAGGTTGACCCTGACATGCTGGAAAATAAACCTTTTGCTT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000208607.2 |
||
CDS-3UTR CCA 90 bp | AGAGTCGGCTCTCTCTTTAGATCTCATGAGGCCTGGGGATCAAACCCAGGTTGTGCCACCAGCGCCAGGTaGGATCGTGCACTGGGTCTG | + |
Preference number: 4 (lower is better) Translates to: RVGSLFRSHEAWGSNPGCATSAR*DRALGL Trigger: CAGACCCAGTGCACGATCCCACCTGGCGCTGGTGGC...ACAACCTGGGTTTGATCCCCAGGCCTCATGAGATCTAAAGAGAGAGCCGACTCT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000061193.4 ENSMUST00000208607.2 |
||
CDS-3UTR CCA 90 bp | CACTATGTGAGGCCACACGAGGCAGAACAGGATGTAGAAGACAACCAGGGCTATGCCACCAGCGCCAGGTaGGATCGTGCACTGGGTCTG | + |
Preference number: 4 (lower is better) Translates to: HYVRPHEAEQDVEDNQGYATSAR*DRALGL Trigger: CAGACCCAGTGCACGATCCCACCTGGCGCTGGTGGC...ATAGCCCTGGTTGTCTTCTACATCCTGTTCTGCCTCGTGTGGCCTCACATAGTG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000207115.2 ENSMUST00000208371.2 ENSMUST00000208607.2 |
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CDS-3UTR TCA 90 bp | TCCTCAAGGCCAGTGTTGAGGTCAGAGGACAGCTTCACAGAGTCGGCTCTCTCTGCTGGTTCTGTCGAATaGAGAGCGTGCTCTCGGTGG | + |
Preference number: 4 (lower is better) Translates to: SSRPVLRSEDSFTESALSAGSVE*RACSRW Trigger: CCACCGAGAGCACGCTCTTCATTCGACAGAACCAGC...AGAGAGAGCCGACTCTGTGAAGCTGTCCTCTGACCTCAACACTGGCCTTGAGGA 57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000061193.4 ENSMUST00000208607.2 |
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CDS-3UTR CCA 90 bp | TTAGATCTCATGAGGCCTGGGGATCAAACCCAGGTTGTCAGGCTTGAGAGCTCCTTCATCCCCATCAGGTaGCCCTTTCGGGCCAGCTCC | + |
Preference number: 4 (lower is better) Translates to: LDLMRPGDQTQVVRLESSFIPIR*PFRASS Trigger: GGAGCTGGCCCGAAAGGGCCACCTGATGGGGATGAA...GGAGCTCTCAAGCCTGACAACCTGGGTTTGATCCCCAGGCCTCATGAGATCTAA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000061193.4 ENSMUST00000208607.2 |
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CDS-3UTR CCA 90 bp | TCCTCAAGGCCAGTGTTGAGGTCAGAGGACAGCTTCACAGAGTCGGCTCTCTCTCCAAGGTACGTGCGCTaGATGCAATTCCCAGGAGCG | + |
Preference number: 4 (lower is better) Translates to: SSRPVLRSEDSFTESALSPRYVR*MQFPGA Trigger: CGCTCCTGGGAATTGCATCCAGCGCACGTACCTTGG...AGAGAGAGCCGACTCTGTGAAGCTGTCCTCTGACCTCAACACTGGCCTTGAGGA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000061193.4 |
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CDS-3UTR GCA 90 bp | CCCTGCATAACTGGAAGTGGGAGGGGTGACCCTACAGACCAGACCCACCAACTGGAACCCATCTGCTGCTaGCATGGCTTTTGTCGAAGA | + |
Preference number: 4 (lower is better) Translates to: PCITGSGRGDPTDQTHQLEPICC*HGFCRR Trigger: TCTTCGACAAAAGCCATGGCAGCAGCAGATGGGTTC...CAGTTGGTGGGTCTGGTCTGTAGGGTCACCCCTCCCACTTCCAGTTATGCAGGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000207115.2 ENSMUST00000208607.2 |
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CDS-3UTR CCA 90 bp | CCCTGCATAACTGGAAGTGGGAGGGGTGACCCTACAGACCAGACCCACCAACTGCTGAGAAGCCAAGAATaGGACAGTAGAAGGAGCCGA | + |
Preference number: 4 (lower is better) Translates to: PCITGSGRGDPTDQTHQLLRSQE*DSRRSR Trigger: TCGGCTCCTTCTACTGTCCCATTCTTGGCTTCTCAG...CAGTTGGTGGGTCTGGTCTGTAGGGTCACCCCTCCCACTTCCAGTTATGCAGGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000207115.2 ENSMUST00000208607.2 |
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CDS-3UTR CCA 90 bp | TATGTGAGGCCACACGAGGCAGAACAGGATGTAGAAGACAACCAGGGCTATAAAGCCACCAGCGCCAGGTaGGATCGTGCACTGGGTCTG | + |
Preference number: 4 (lower is better) Translates to: YVRPHEAEQDVEDNQGYKATSAR*DRALGL Trigger: CAGACCCAGTGCACGATCCCACCTGGCGCTGGTGGC...TTTATAGCCCTGGTTGTCTTCTACATCCTGTTCTGCCTCGTGTGGCCTCACATA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000207115.2 ENSMUST00000208371.2 ENSMUST00000208607.2 |
||
CDS-3UTR TCA 90 bp | CTCTCTTTAGATCTCATGAGGCCTGGGGATCAAACCCAGGTTGTCAGGCTTGAGGGACCCTCAAAACTGTaGGACTGGAGGCTGAAGCCC | + |
Preference number: 4 (lower is better) Translates to: LSLDLMRPGDQTQVVRLEGPSKL*DWRLKP Trigger: GGGCTTCAGCCTCCAGTCTCACAGTTTTGAGGGTCC...CTCAAGCCTGACAACCTGGGTTTGATCCCCAGGCCTCATGAGATCTAAAGAGAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000061193.4 |
||
CDS-3UTR CCA 90 bp | CACAGAGTCGGCTCTCTCTTTAGATCTCATGAGGCCTGGGGATCAAACCCAGGTGTGGCAATGGCGTCATaGATGGTGGCTGAGAAGCCA | + |
Preference number: 4 (lower is better) Translates to: HRVGSLFRSHEAWGSNPGVAMAS*MVAEKP Trigger: TGGCTTCTCAGCCACCATCCATGACGCCATTGCCAC...ACCTGGGTTTGATCCCCAGGCCTCATGAGATCTAAAGAGAGAGCCGACTCTGTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000061193.4 ENSMUST00000208607.2 |
||
CDS-3UTR CCA 90 bp | GACATGAACATTCTAGCAAACCAGAAAGTCCTGGGGAGGTGGCAGGCTGCATTCTGCTCTCGGTGGCAATaGCGTCATGGATGGTGGCTG | + |
Preference number: 4 (lower is better) Translates to: DMNILANQKVLGRWQAAFCSRWQ*RHGWWL Trigger: CAGCCACCATCCATGACGCCATTGCCACCGAGAGCA...GAATGCAGCCTGCCACCTCCCCAGGACTTTCTGGTTTGCTAGAATGTTCATGTC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000061193.4 ENSMUST00000208607.2 |
||
CDS-3UTR CCA 90 bp | AGGTCAGAGGACAGCTTCACAGAGTCGGCTCTCTCTTTAGATCTCATGAGGCCTAGAGCGTGCTCTCGGTaGCAATGGCGTCATGGATGG | + |
Preference number: 4 (lower is better) Translates to: RSEDSFTESALSLDLMRPRACSR*QWRHGW Trigger: CCATCCATGACGCCATTGCCACCGAGAGCACGCTCT...AGGCCTCATGAGATCTAAAGAGAGAGCCGACTCTGTGAAGCTGTCCTCTGACCT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000061193.4 ENSMUST00000208607.2 |
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CDS-3UTR CCA 90 bp | TCGGCTCTCTCTTTAGATCTCATGAGGCCTGGGGATCAAACCCAGGTTGTCAGGTTGAAAGGGCACGTGTaGGTGAAGGAGATCGCCTGG | + |
Preference number: 4 (lower is better) Translates to: SALSLDLMRPGDQTQVVRLKGHV*VKEIAW Trigger: CCAGGCGATCTCCTTCACCCACACGTGCCCTTTCAA...CCTGACAACCTGGGTTTGATCCCCAGGCCTCATGAGATCTAAAGAGAGAGCCGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000061193.4 ENSMUST00000208607.2 |
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3UTR CAA 72 bp | CAGACCAGGGACTCAGGCCACCTATGCTGTCTTAGCTaGAACATTGTCCTCTTTCGAACCAGCTCTGGAGGG | + |
Preference number: 4 (lower is better) Translates to: QTRDSGHLCCLS*NIVLFRTSSGG Trigger: CCCTCCAGAGCTGGTTCGAAAGAGGACAATGTTCAAGCTAAGACAGCATAGGTGGCCTGAGTCCCTGGTCTG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000208607.2 |
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CDS-3UTR CCA 90 bp | TTAGATCTCATGAGGCCTGGGGATCAAACCCAGGTTGTCAGGCTTGAGAGCTCCATGAACACGGGGGCATaGTTCACAGTGTACCACAGG | + |
Preference number: 4 (lower is better) Translates to: LDLMRPGDQTQVVRLESSMNTGA*FTVYHR Trigger: CCTGTGGTACACTGTGAACCATGCCCCCGTGTTCAT...GGAGCTCTCAAGCCTGACAACCTGGGTTTGATCCCCAGGCCTCATGAGATCTAA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000061193.4 ENSMUST00000208607.2 |
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CDS-3UTR CCA 90 bp | CACAGAGTCGGCTCTCTCTTTAGATCTCATGAGGCCTGGGGATCAAACCCAGGTTGGCGTCATGGATGGTaGCTGAGAAGCCAAGAATGG | + |
Preference number: 4 (lower is better) Translates to: HRVGSLFRSHEAWGSNPGWRHGW*LRSQEW Trigger: CCATTCTTGGCTTCTCAGCCACCATCCATGACGCCA...ACCTGGGTTTGATCCCCAGGCCTCATGAGATCTAAAGAGAGAGCCGACTCTGTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000061193.4 ENSMUST00000208607.2 |
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CDS-3UTR CCA 90 bp | CACTATGTGAGGCCACACGAGGCAGAACAGGATGTAGAAGACAACCAGGGCTATTTGAAAGGGCACGTGTaGGTGAAGGAGATCGCCTGG | + |
Preference number: 4 (lower is better) Translates to: HYVRPHEAEQDVEDNQGYLKGHV*VKEIAW Trigger: CCAGGCGATCTCCTTCACCCACACGTGCCCTTTCAA...ATAGCCCTGGTTGTCTTCTACATCCTGTTCTGCCTCGTGTGGCCTCACATAGTG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000207115.2 ENSMUST00000208607.2 |
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3UTR CAA 72 bp | CAGGGTCAACCTTCAATTAGTTCCTCAAGGCCAGTGTaGAGGTCAGAGGACAGCTTCACAGAGTCGGCTCTC | + |
Preference number: 4 (lower is better) Translates to: QGQPSISSSRPV*RSEDSFTESAL Trigger: GAGAGCCGACTCTGTGAAGCTGTCCTCTGACCTCAACACTGGCCTTGAGGAACTAATTGAAGGTTGACCCTG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000061193.4 ENSMUST00000208607.2 |
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CDS-3UTR TCA 90 bp | GACAACCAGGGCTATAAAGAAGCTGGTAGACACCATAACAATGAAGGAGGTCCGGCTGGTTCTGTCGAATaGAGAGCGTGCTCTCGGTGG | + |
Preference number: 4 (lower is better) Translates to: DNQGYKEAGRHHNNEGGPAGSVE*RACSRW Trigger: CCACCGAGAGCACGCTCTTCATTCGACAGAACCAGC...CGGACCTCCTTCATTGTTATGGTGTCTACCAGCTTCTTTATAGCCCTGGTTGTC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000207115.2 ENSMUST00000208607.2 |
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CDS-3UTR TCA 90 bp | GACATGAACATTCTAGCAAACCAGAAAGTCCTGGGGAGGTGGCAGGCTGCATTCCTGAGTCACAGTTACTaGAAGGCACTCAGGATCCGC | + |
Preference number: 4 (lower is better) Translates to: DMNILANQKVLGRWQAAFLSHSY*KALRIR Trigger: GCGGATCCTGAGTGCCTTTCAGTAACTGTGACTCAG...GAATGCAGCCTGCCACCTCCCCAGGACTTTCTGGTTTGCTAGAATGTTCATGTC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000061193.4 |
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CDS-3UTR CCA 90 bp | TCGGCTCTCTCTTTAGATCTCATGAGGCCTGGGGATCAAACCCAGGTTGTCAGGGAATGCCCAAAGGTTTaGTTTTCTCGGCCACACAGG | + |
Preference number: 4 (lower is better) Translates to: SALSLDLMRPGDQTQVVRECPKV*FSRPHR Trigger: CCTGTGTGGCCGAGAAAACCAAACCTTTGGGCATTC...CCTGACAACCTGGGTTTGATCCCCAGGCCTCATGAGATCTAAAGAGAGAGCCGA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000061193.4 ENSMUST00000208607.2 |
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CDS-3UTR CCA 90 bp | CTCTCTTTAGATCTCATGAGGCCTGGGGATCAAACCCAGGTTGTCAGGCTTGAGATGAACACGGGGGCATaGTTCACAGTGTACCACAGG | + |
Preference number: 4 (lower is better) Translates to: LSLDLMRPGDQTQVVRLEMNTGA*FTVYHR Trigger: CCTGTGGTACACTGTGAACCATGCCCCCGTGTTCAT...CTCAAGCCTGACAACCTGGGTTTGATCCCCAGGCCTCATGAGATCTAAAGAGAG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000061193.4 ENSMUST00000208607.2 |
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CDS-3UTR CCA 90 bp | GTCGGCTCTCTCTTTAGATCTCATGAGGCCTGGGGATCAAACCCAGGTTGTCAGCTGAGAAGCCAAGAATaGGACAGTAGAAGGAGCCGA | + |
Preference number: 4 (lower is better) Translates to: VGSLFRSHEAWGSNPGCQLRSQE*DSRRSR Trigger: TCGGCTCCTTCTACTGTCCCATTCTTGGCTTCTCAG...CTGACAACCTGGGTTTGATCCCCAGGCCTCATGAGATCTAAAGAGAGAGCCGAC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000061193.4 ENSMUST00000208607.2 |
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CDS-3UTR CCA 90 bp | GTCGGCTCTCTCTTTAGATCTCATGAGGCCTGGGGATCAAACCCAGGTTGTCAGCAATGGCGTCATGGATaGTGGCTGAGAAGCCAAGAA | + |
Preference number: 4 (lower is better) Translates to: VGSLFRSHEAWGSNPGCQQWRHG*WLRSQE Trigger: TTCTTGGCTTCTCAGCCACCATCCATGACGCCATTG...CTGACAACCTGGGTTTGATCCCCAGGCCTCATGAGATCTAAAGAGAGAGCCGAC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000061193.4 ENSMUST00000208607.2 |
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CDS-3UTR CCA 90 bp | GAAGAACTCAGGTGGGTAGATGCTTTGGGGGATGATGTCATAACAAGGGGAGTTTGCTCTCGGTGGCAATaGCGTCATGGATGGTGGCTG | + |
Preference number: 4 (lower is better) Translates to: EELRWVDALGDDVITRGVCSRWQ*RHGWWL Trigger: CAGCCACCATCCATGACGCCATTGCCACCGAGAGCA...AACTCCCCTTGTTATGACATCATCCCCCAAAGCATCTACCCACCTGAGTTCTTC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000207115.2 ENSMUST00000208607.2 |
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CDS-3UTR CCA 90 bp | GAAGAACTCAGGTGGGTAGATGCTTTGGGGGATGATGTCATAACAAGGGGAGTTAGAGCGTGCTCTCGGTaGCAATGGCGTCATGGATGG | + |
Preference number: 4 (lower is better) Translates to: EELRWVDALGDDVITRGVRACSR*QWRHGW Trigger: CCATCCATGACGCCATTGCCACCGAGAGCACGCTCT...AACTCCCCTTGTTATGACATCATCCCCCAAAGCATCTACCCACCTGAGTTCTTC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000207115.2 ENSMUST00000208607.2 |
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CDS-3UTR CCA 90 bp | GTCGGCTCTCTCTTTAGATCTCATGAGGCCTGGGGATCAAACCCAGGTTGTCAGTTCAGAGACCAGAGGTaGCAGAGCAACATAGCTCTC | + |
Preference number: 4 (lower is better) Translates to: VGSLFRSHEAWGSNPGCQFRDQR*QSNIAL Trigger: GAGAGCTATGTTGCTCTGCCACCTCTGGTCTCTGAA...CTGACAACCTGGGTTTGATCCCCAGGCCTCATGAGATCTAAAGAGAGAGCCGAC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000061193.4 ENSMUST00000208607.2 |
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CDS-3UTR CCA 90 bp | AGACCCAGGCCTTCACTATGTGAGGCCACACGAGGCAGAACAGGATGTAGAAGAAGGGCTTATCATACTTaGAGTGCAGCCACAGCAGGT | + |
Preference number: 4 (lower is better) Translates to: RPRPSLCEATRGRTGCRRRAYHT*SAATAG Trigger: ACCTGCTGTGGCTGCACTCCAAGTATGATAAGCCCT...TCTTCTACATCCTGTTCTGCCTCGTGTGGCCTCACATAGTGAAGGCCTGGGTCT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000207115.2 ENSMUST00000208607.2 |
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CDS-3UTR TCA 90 bp | TCCTCAAGGCCAGTGTTGAGGTCAGAGGACAGCTTCACAGAGTCGGCTCTCTCTTGTTGTTCAATGTGTTaGAGAACAAGCCCTTGGGTG | + |
Preference number: 4 (lower is better) Translates to: SSRPVLRSEDSFTESALSCCSMC*RTSPWV Trigger: CACCCAAGGGCTTGTTCTTCAACACATTGAACAACA...AGAGAGAGCCGACTCTGTGAAGCTGTCCTCTGACCTCAACACTGGCCTTGAGGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000061193.4 ENSMUST00000208607.2 |
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CDS-3UTR GCA 90 bp | AGGTCAGAGGACAGCTTCACAGAGTCGGCTCTCTCTTTAGATCTCATGAGGCCTGAACCCATCTGCTGCTaGCATGGCTTTTGTCGAAGA | + |
Preference number: 4 (lower is better) Translates to: RSEDSFTESALSLDLMRPEPICC*HGFCRR Trigger: TCTTCGACAAAAGCCATGGCAGCAGCAGATGGGTTC...AGGCCTCATGAGATCTAAAGAGAGAGCCGACTCTGTGAAGCTGTCCTCTGACCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000061193.4 ENSMUST00000208607.2 |
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CDS-3UTR CCA 90 bp | CACTATGTGAGGCCACACGAGGCAGAACAGGATGTAGAAGACAACCAGGGCTATGAATGCCCAAAGGTTTaGTTTTCTCGGCCACACAGG | + |
Preference number: 4 (lower is better) Translates to: HYVRPHEAEQDVEDNQGYECPKV*FSRPHR Trigger: CCTGTGTGGCCGAGAAAACCAAACCTTTGGGCATTC...ATAGCCCTGGTTGTCTTCTACATCCTGTTCTGCCTCGTGTGGCCTCACATAGTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000208607.2 |
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CDS-3UTR CCA 90 bp | CTCTCTTTAGATCTCATGAGGCCTGGGGATCAAACCCAGGTTGTCAGGCTTGAGTTCAGAGACCAGAGGTaGCAGAGCAACATAGCTCTC | + |
Preference number: 4 (lower is better) Translates to: LSLDLMRPGDQTQVVRLEFRDQR*QSNIAL Trigger: GAGAGCTATGTTGCTCTGCCACCTCTGGTCTCTGAA...CTCAAGCCTGACAACCTGGGTTTGATCCCCAGGCCTCATGAGATCTAAAGAGAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000061193.4 ENSMUST00000208607.2 |
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CDS-3UTR CCA 90 bp | CACTATGTGAGGCCACACGAGGCAGAACAGGATGTAGAAGACAACCAGGGCTATAGGGCTTATCATACTTaGAGTGCAGCCACAGCAGGT | + |
Preference number: 4 (lower is better) Translates to: HYVRPHEAEQDVEDNQGYRAYHT*SAATAG Trigger: ACCTGCTGTGGCTGCACTCCAAGTATGATAAGCCCT...ATAGCCCTGGTTGTCTTCTACATCCTGTTCTGCCTCGTGTGGCCTCACATAGTG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000207115.2 ENSMUST00000208607.2 |
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3UTR CAA 72 bp | GTGCGCTGGATGCAATTCCCAGGAGCGCCCAAGACCTaGAGCATCATAGAAGTCTTCTTGATGTTACGTCCA | + |
Preference number: 4 (lower is better) Translates to: VRWMQFPGAPKT*SIIEVFLMLRP Trigger: TGGACGTAACATCAAGAAGACTTCTATGATGCTCAAGGTCTTGGGCGCTCCTGGGAATTGCATCCAGCGCAC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000208607.2 |
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3UTR CAA 72 bp | GGTGGGGCAGGATTGTGGAACCCTAGGCATTACTGTTaGAGGCACCTTGAGTGTAGTTTGCAGAAAGAGTCC | + |
Preference number: 4 (lower is better) Translates to: GGAGLWNPRHYC*RHLECSLQKES Trigger: GGACTCTTTCTGCAAACTACACTCAAGGTGCCTCAAACAGTAATGCCTAGGGTTCCACAATCCTGCCCCACC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000207115.2 ENSMUST00000208607.2 |
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CDS-3UTR TCA 90 bp | CTCAAGGCCAGTGTTGAGGTCAGAGGACAGCTTCACAGAGTCGGCTCTCTCTTTCCGGACAGGAAAAGTTaGTTTGCAGGTAGTAAGGAA | + |
Preference number: 4 (lower is better) Translates to: LKASVEVRGQLHRVGSLFPDRKS*FAGSKE Trigger: TTCCTTACTACCTGCAAATCAACTTTTCCTGTCCGG...AAAGAGAGAGCCGACTCTGTGAAGCTGTCCTCTGACCTCAACACTGGCCTTGAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000061193.4 ENSMUST00000208607.2 |
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CDS-3UTR TCA 90 bp | TTGTGGAACCCTAGGCATTACTGTTTGAGGCACCTTGAGTGTAGTTTGCAGAAAGCTGGTTCTGTCGAATaGAGAGCGTGCTCTCGGTGG | + |
Preference number: 4 (lower is better) Translates to: LWNPRHYCLRHLECSLQKAGSVE*RACSRW Trigger: CCACCGAGAGCACGCTCTTCATTCGACAGAACCAGC...TTTCTGCAAACTACACTCAAGGTGCCTCAAACAGTAATGCCTAGGGTTCCACAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000207115.2 ENSMUST00000208607.2 |
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CDS-3UTR TCA 90 bp | TTAGATCTCATGAGGCCTGGGGATCAAACCCAGGTTGTCAGGCTTGAGAGCTCCTGTTGTTCAATGTGTTaGAGAACAAGCCCTTGGGTG | + |
Preference number: 4 (lower is better) Translates to: LDLMRPGDQTQVVRLESSCCSMC*RTSPWV Trigger: CACCCAAGGGCTTGTTCTTCAACACATTGAACAACA...GGAGCTCTCAAGCCTGACAACCTGGGTTTGATCCCCAGGCCTCATGAGATCTAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000061193.4 ENSMUST00000208607.2 |
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CDS-3UTR TCA 90 bp | CTTCACTATGTGAGGCCACACGAGGCAGAACAGGATGTAGAAGACAACCAGGGCTGTTGTTCAATGTGTTaGAGAACAAGCCCTTGGGTG | + |
Preference number: 4 (lower is better) Translates to: LHYVRPHEAEQDVEDNQGCCSMC*RTSPWV Trigger: CACCCAAGGGCTTGTTCTTCAACACATTGAACAACA...GCCCTGGTTGTCTTCTACATCCTGTTCTGCCTCGTGTGGCCTCACATAGTGAAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000207115.2 ENSMUST00000208371.2 ENSMUST00000208607.2 |
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CDS-3UTR GCA 90 bp | GTGAGGCCACACGAGGCAGAACAGGATGTAGAAGACAACCAGGGCTATAAAGAAGAACCCATCTGCTGCTaGCATGGCTTTTGTCGAAGA | + |
Preference number: 4 (lower is better) Translates to: VRPHEAEQDVEDNQGYKEEPICC*HGFCRR Trigger: TCTTCGACAAAAGCCATGGCAGCAGCAGATGGGTTC...TTCTTTATAGCCCTGGTTGTCTTCTACATCCTGTTCTGCCTCGTGTGGCCTCAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000207115.2 ENSMUST00000208607.2 |
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CDS-3UTR GCA 90 bp | TATGTGAGGCCACACGAGGCAGAACAGGATGTAGAAGACAACCAGGGCTATAAACACGAACCCATCTGCTaGTGCCATGGCTTTTGTCGA | + |
Preference number: 4 (lower is better) Translates to: YVRPHEAEQDVEDNQGYKHEPIC*CHGFCR Trigger: TCGACAAAAGCCATGGCAGCAGCAGATGGGTTCGTG...TTTATAGCCCTGGTTGTCTTCTACATCCTGTTCTGCCTCGTGTGGCCTCACATA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000207115.2 ENSMUST00000208607.2 |
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CDS-3UTR GCA 90 bp | TCGGCTCTCTCTTTAGATCTCATGAGGCCTGGGGATCAAACCCAGGTTGTCAGGTGTTACGTCCAATCATaGCCTGTTCAGAGCATCTCT | + |
Preference number: 4 (lower is better) Translates to: SALSLDLMRPGDQTQVVRCYVQS*PVQSIS Trigger: AGAGATGCTCTGAACAGGGCATGATTGGACGTAACA...CCTGACAACCTGGGTTTGATCCCCAGGCCTCATGAGATCTAAAGAGAGAGCCGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000061193.4 |
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CDS-3UTR CCA 90 bp | CTCAAGGCCAGTGTTGAGGTCAGAGGACAGCTTCACAGAGTCGGCTCTCTCTTTGAGTCTGTCAACTTTTaGAACACCTTGGCCACTGTA | + |
Preference number: 4 (lower is better) Translates to: LKASVEVRGQLHRVGSLFESVNF*NTLATV Trigger: TACAGTGGCCAAGGTGTTCCAAAAGTTGACAGACTC...AAAGAGAGAGCCGACTCTGTGAAGCTGTCCTCTGACCTCAACACTGGCCTTGAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000061193.4 ENSMUST00000208607.2 |
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CDS-3UTR CCA 90 bp | CTCGGTGGTCCTTTCGACCTTTGTTTTCCAGATGAGGCTATTCGTTCTATGCAGATGAACACGGGGGCATaGTTCACAGTGTACCACAGG | + |
Preference number: 4 (lower is better) Translates to: LGGPFDLCFPDEAIRSMQMNTGA*FTVYHR Trigger: CCTGTGGTACACTGTGAACCATGCCCCCGTGTTCAT...CTGCATAGAACGAATAGCCTCATCTGGAAAACAAAGGTCGAAAGGACCACCGAG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000207115.2 ENSMUST00000208607.2 |
||
CDS-3UTR CCA 90 bp | GACAACCAGGGCTATAAAGAAGCTGGTAGACACCATAACAATGAAGGAGGTCCGTGGCGTCATGGATGGTaGCTGAGAAGCCAAGAATGG | + |
Preference number: 4 (lower is better) Translates to: DNQGYKEAGRHHNNEGGPWRHGW*LRSQEW Trigger: CCATTCTTGGCTTCTCAGCCACCATCCATGACGCCA...CGGACCTCCTTCATTGTTATGGTGTCTACCAGCTTCTTTATAGCCCTGGTTGTC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000207115.2 ENSMUST00000208607.2 |
||
CDS-3UTR CCA 90 bp | AGGTGGGTAGATGCTTTGGGGGATGATGTCATAACAAGGGGAGTTCTCCAAGCACAATGGCGTCATGGATaGTGGCTGAGAAGCCAAGAA | + |
Preference number: 4 (lower is better) Translates to: RWVDALGDDVITRGVLQAQWRHG*WLRSQE Trigger: TTCTTGGCTTCTCAGCCACCATCCATGACGCCATTG...TGCTTGGAGAACTCCCCTTGTTATGACATCATCCCCCAAAGCATCTACCCACCT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000207115.2 ENSMUST00000208607.2 |
||
CDS-3UTR CCA 90 bp | TTGTGGAACCCTAGGCATTACTGTTTGAGGCACCTTGAGTGTAGTTTGCAGAAATGCTCTCGGTGGCAATaGCGTCATGGATGGTGGCTG | + |
Preference number: 4 (lower is better) Translates to: LWNPRHYCLRHLECSLQKCSRWQ*RHGWWL Trigger: CAGCCACCATCCATGACGCCATTGCCACCGAGAGCA...TTTCTGCAAACTACACTCAAGGTGCCTCAAACAGTAATGCCTAGGGTTCCACAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000207115.2 ENSMUST00000208607.2 |
||
CDS-3UTR CCA 90 bp | AGGTGGGTAGATGCTTTGGGGGATGATGTCATAACAAGGGGAGTTCTCCAAGCATTCAGAGACCAGAGGTaGCAGAGCAACATAGCTCTC | + |
Preference number: 4 (lower is better) Translates to: RWVDALGDDVITRGVLQAFRDQR*QSNIAL Trigger: GAGAGCTATGTTGCTCTGCCACCTCTGGTCTCTGAA...TGCTTGGAGAACTCCCCTTGTTATGACATCATCCCCCAAAGCATCTACCCACCT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000207115.2 ENSMUST00000208607.2 |
||
CDS-3UTR CCA 90 bp | GAACAGGATGTAGAAGACAACCAGGGCTATAAAGAAGCTGGTAGACACCATAACCCAAGGTACGTGCGCTaGATGCAATTCCCAGGAGCG | + |
Preference number: 4 (lower is better) Translates to: EQDVEDNQGYKEAGRHHNPRYVR*MQFPGA Trigger: CGCTCCTGGGAATTGCATCCAGCGCACGTACCTTGG...GTTATGGTGTCTACCAGCTTCTTTATAGCCCTGGTTGTCTTCTACATCCTGTTC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000207115.2 ENSMUST00000208371.2 |
||
CDS-3UTR CCA 90 bp | AGAGTCGGCTCTCTCTTTAGATCTCATGAGGCCTGGGGATCAAACCCAGGTTGTGAAGAAGAACTCAGGTaGGTAGATGCTTTGGGGGAT | + |
Preference number: 4 (lower is better) Translates to: RVGSLFRSHEAWGSNPGCEEELR*VDALGD Trigger: ATCCCCCAAAGCATCTACCCACCTGAGTTCTTCTTC...ACAACCTGGGTTTGATCCCCAGGCCTCATGAGATCTAAAGAGAGAGCCGACTCT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000061193.4 |
||
CDS-3UTR TCA 90 bp | TCCTCAAGGCCAGTGTTGAGGTCAGAGGACAGCTTCACAGAGTCGGCTCTCTCTACGGTAGAAATTGACTaGGTACATGTAGTTGATCTG | + |
Preference number: 4 (lower is better) Translates to: SSRPVLRSEDSFTESALSTVEID*VHVVDL Trigger: CAGATCAACTACATGTACTCAGTCAATTTCTACCGT...AGAGAGAGCCGACTCTGTGAAGCTGTCCTCTGACCTCAACACTGGCCTTGAGGA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000061193.4 ENSMUST00000208607.2 |
||
CDS-3UTR TCA 90 bp | TCCTCAAGGCCAGTGTTGAGGTCAGAGGACAGCTTCACAGAGTCGGCTCTCTCTCTGGAAATTAGAATCTaGGAACAGGATGGACTTTTC | + |
Preference number: 4 (lower is better) Translates to: SSRPVLRSEDSFTESALSLEIRI*EQDGLF Trigger: GAAAAGTCCATCCTGTTCTCAGATTCTAATTTCCAG...AGAGAGAGCCGACTCTGTGAAGCTGTCCTCTGACCTCAACACTGGCCTTGAGGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000061193.4 ENSMUST00000208607.2 |
||
CDS-3UTR TCA 90 bp | GGTCCCCAAGGGATTACGTGTCCAGCGGGCTGTTGTAACGGAAGATTTCTTCCTGGCACATCAATTAAATaGATCTCCTTGAAAGGGCAC | + |
Preference number: 4 (lower is better) Translates to: GPQGITCPAGCCNGRFLPGTSIK*ISLKGH Trigger: GTGCCCTTTCAAGGAGATTCATTTAATTGATGTGCC...AGGAAGAAATCTTCCGTTACAACAGCCCGCTGGACACGTAATCCCTTGGGGACC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000208607.2 |
||
CDS-3UTR TCA 90 bp | CTTCACAGAGTCGGCTCTCTCTTTAGATCTCATGAGGCCTGGGGATCAAACCCACTTGTGAAGGTGTCCTaGTGTGACAATAAGACCACA | + |
Preference number: 4 (lower is better) Translates to: LHRVGSLFRSHEAWGSNPLVKVS*CDNKTT Trigger: TGTGGTCTTATTGTCACATCAGGACACCTTCACAAG...TGGGTTTGATCCCCAGGCCTCATGAGATCTAAAGAGAGAGCCGACTCTGTGAAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000061193.4 ENSMUST00000208607.2 |
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CDS-3UTR TCA 90 bp | AGACCCAGGCCTTCACTATGTGAGGCCACACGAGGCAGAACAGGATGTAGAAGATTAAGAAGGACATCCTaGGTCACAGTTACTGAAAGG | + |
Preference number: 4 (lower is better) Translates to: RPRPSLCEATRGRTGCRRLRRTS*VTVTER Trigger: CCTTTCAGTAACTGTGACTCAGGATGTCCTTCTTAA...TCTTCTACATCCTGTTCTGCCTCGTGTGGCCTCACATAGTGAAGGCCTGGGTCT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000207115.2 ENSMUST00000208371.2 |
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CDS-3UTR TCA 90 bp | CTTCACTATGTGAGGCCACACGAGGCAGAACAGGATGTAGAAGACAACCAGGGCTTAAGAAGGACATCCTaGGTCACAGTTACTGAAAGG | + |
Preference number: 4 (lower is better) Translates to: LHYVRPHEAEQDVEDNQGLRRTS*VTVTER Trigger: CCTTTCAGTAACTGTGACTCAGGATGTCCTTCTTAA...GCCCTGGTTGTCTTCTACATCCTGTTCTGCCTCGTGTGGCCTCACATAGTGAAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000207115.2 ENSMUST00000208371.2 |
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CDS-3UTR TCA 90 bp | AGGTCAGAGGACAGCTTCACAGAGTCGGCTCTCTCTTTAGATCTCATGAGGCCTTGCTCACTAACAACTTaGAGAAGAACTCAGGTGGGT | + |
Preference number: 4 (lower is better) Translates to: RSEDSFTESALSLDLMRPCSLTT*RRTQVG Trigger: ACCCACCTGAGTTCTTCTTCAAGTTGTTAGTGAGCA...AGGCCTCATGAGATCTAAAGAGAGAGCCGACTCTGTGAAGCTGTCCTCTGACCT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000061193.4 |
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CDS-3UTR CCA 90 bp | AGGTCAGAGGACAGCTTCACAGAGTCGGCTCTCTCTTTAGATCTCATGAGGCCTGAGTCTGTCAACTTTTaGAACACCTTGGCCACTGTA | + |
Preference number: 4 (lower is better) Translates to: RSEDSFTESALSLDLMRPESVNF*NTLATV Trigger: TACAGTGGCCAAGGTGTTCCAAAAGTTGACAGACTC...AGGCCTCATGAGATCTAAAGAGAGAGCCGACTCTGTGAAGCTGTCCTCTGACCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000061193.4 ENSMUST00000208607.2 |
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CDS-3UTR CCA 90 bp | GTCGGCTCTCTCTTTAGATCTCATGAGGCCTGGGGATCAAACCCAGGTTGTCAGCATAGAACCTTTTCTTaGATACGAAGGGCCCTATAC | + |
Preference number: 4 (lower is better) Translates to: VGSLFRSHEAWGSNPGCQHRTFS*IRRALY Trigger: GTATAGGGCCCTTCGTATCCAAGAAAAGGTTCTATG...CTGACAACCTGGGTTTGATCCCCAGGCCTCATGAGATCTAAAGAGAGAGCCGAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000061193.4 ENSMUST00000208607.2 |
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CDS-3UTR CCA 90 bp | CCTTTCGACCTTTGTTTTCCAGATGAGGCTATTCGTTCTATGCAGGCCCATATAGTGGCAATGGCGTCATaGATGGTGGCTGAGAAGCCA | + |
Preference number: 4 (lower is better) Translates to: PFDLCFPDEAIRSMQAHIVAMAS*MVAEKP Trigger: TGGCTTCTCAGCCACCATCCATGACGCCATTGCCAC...TATATGGGCCTGCATAGAACGAATAGCCTCATCTGGAAAACAAAGGTCGAAAGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000207115.2 ENSMUST00000208607.2 |
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CDS-3UTR CCA 90 bp | CACTCAGGATCCGCTATTGTCACAGCAATTGCCAGCTTCTTATCCACATTAATAAGAGCGTGCTCTCGGTaGCAATGGCGTCATGGATGG | + |
Preference number: 4 (lower is better) Translates to: HSGSAIVTAIASFLSTLIRACSR*QWRHGW Trigger: CCATCCATGACGCCATTGCCACCGAGAGCACGCTCT...TATTAATGTGGATAAGAAGCTGGCAATTGCTGTGACAATAGCGGATCCTGAGTG 49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000208607.2 |
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CDS-3UTR CCA 90 bp | CCTTTCGACCTTTGTTTTCCAGATGAGGCTATTCGTTCTATGCAGGCCCATATATTGAAAGGGCACGTGTaGGTGAAGGAGATCGCCTGG | + |
Preference number: 4 (lower is better) Translates to: PFDLCFPDEAIRSMQAHILKGHV*VKEIAW Trigger: CCAGGCGATCTCCTTCACCCACACGTGCCCTTTCAA...TATATGGGCCTGCATAGAACGAATAGCCTCATCTGGAAAACAAAGGTCGAAAGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000207115.2 ENSMUST00000208607.2 |
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CDS-3UTR CCA 90 bp | TATGTGCTATTGTCTACACCTCTATTGCTCACTAACAACTTGAAGAAGAACTCAGCCACCAGCGCCAGGTaGGATCGTGCACTGGGTCTG | + |
Preference number: 4 (lower is better) Translates to: YVLLSTPLLLTNNLKKNSATSAR*DRALGL Trigger: CAGACCCAGTGCACGATCCCACCTGGCGCTGGTGGC...TGAGTTCTTCTTCAAGTTGTTAGTGAGCAATAGAGGTGTAGACAATAGCACATA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000207115.2 ENSMUST00000208371.2 ENSMUST00000208607.2 |
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3UTR CAA 72 bp | GGAGCGCCCAAGACCTTGAGCATCATAGAAGTCTTCTaGATGTTACGTCCAATCATGCCCTGTTCAGAGCAT | + |
Preference number: 4 (lower is better) Translates to: GAPKTLSIIEVF*MLRPIMPCSEH Trigger: ATGCTCTGAACAGGGCATGATTGGACGTAACATCAAGAAGACTTCTATGATGCTCAAGGTCTTGGGCGCTCC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000208607.2 |
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3UTR CAA 72 bp | CGGACAGCCGATGAATATTGGTACCACTTTGAAACCTaGAATAATTCCCCCAAGGTACGTGCGCTGGATGCA | + |
Preference number: 4 (lower is better) Translates to: RTADEYWYHFET*NNSPKVRALDA Trigger: TGCATCCAGCGCACGTACCTTGGGGGAATTATTCAAGGTTTCAAAGTGGTACCAATATTCATCGGCTGTCCG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000208607.2 |
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CDS-3UTR TCA 90 bp | AGAGGCCTAAGGGTTCATGAGGAAGAGTACAGACCAGGGACTCAGGCCACCTATACGGTAGAAATTGACTaGGTACATGTAGTTGATCTG | + |
Preference number: 4 (lower is better) Translates to: RGLRVHEEEYRPGTQATYTVEID*VHVVDL Trigger: CAGATCAACTACATGTACTCAGTCAATTTCTACCGT...ATAGGTGGCCTGAGTCCCTGGTCTGTACTCTTCCTCATGAACCCTTAGGCCTCT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000208607.2 |
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CDS-3UTR TCA 90 bp | CTTCACAGAGTCGGCTCTCTCTTTAGATCTCATGAGGCCTGGGGATCAAACCCAGGCACATCAATTAAATaGATCTCCTTGAAAGGGCAC | + |
Preference number: 4 (lower is better) Translates to: LHRVGSLFRSHEAWGSNPGTSIK*ISLKGH Trigger: GTGCCCTTTCAAGGAGATTCATTTAATTGATGTGCC...TGGGTTTGATCCCCAGGCCTCATGAGATCTAAAGAGAGAGCCGACTCTGTGAAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000061193.4 ENSMUST00000208607.2 |
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CDS-3UTR TCA 90 bp | TTAGATCTCATGAGGCCTGGGGATCAAACCCAGGTTGTCAGGCTTGAGAGCTCCTATGCTGTCTTAGCTTaGACATTGTCCTCTTTCGAA | + |
Preference number: 4 (lower is better) Translates to: LDLMRPGDQTQVVRLESSYAVLA*TLSSFE Trigger: TTCGAAAGAGGACAATGTTCAAGCTAAGACAGCATA...GGAGCTCTCAAGCCTGACAACCTGGGTTTGATCCCCAGGCCTCATGAGATCTAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000061193.4 |
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CDS-3UTR GCA 90 bp | CACAGAGTCGGCTCTCTCTTTAGATCTCATGAGGCCTGGGGATCAAACCCAGGTCAACATAGCTCTCTGTaGGTGATGCATGATGTTTTT | + |
Preference number: 4 (lower is better) Translates to: HRVGSLFRSHEAWGSNPGQHSSL*VMHDVF Trigger: AAAAACATCATGCATCACGCACAGAGAGCTATGTTG...ACCTGGGTTTGATCCCCAGGCCTCATGAGATCTAAAGAGAGAGCCGACTCTGTG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000061193.4 ENSMUST00000208607.2 |
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CDS-3UTR GCA 90 bp | CACGAGGCAGAACAGGATGTAGAAGACAACCAGGGCTATAAAGAAGCTGGTAGAATCGTGCACTGGGTCTaGATAGGGCTCTTCATTTTC | + |
Preference number: 4 (lower is better) Translates to: HEAEQDVEDNQGYKEAGRIVHWV*IGLFIF Trigger: GAAAATGAAGAGCCCTATGCAGACCCAGTGCACGAT...TCTACCAGCTTCTTTATAGCCCTGGTTGTCTTCTACATCCTGTTCTGCCTCGTG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000208371.2 |
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CDS-3UTR CCA 90 bp | TTGTGGAACCCTAGGCATTACTGTTTGAGGCACCTTGAGTGTAGTTTGCAGAAATGGCGTCATGGATGGTaGCTGAGAAGCCAAGAATGG | + |
Preference number: 4 (lower is better) Translates to: LWNPRHYCLRHLECSLQKWRHGW*LRSQEW Trigger: CCATTCTTGGCTTCTCAGCCACCATCCATGACGCCA...TTTCTGCAAACTACACTCAAGGTGCCTCAAACAGTAATGCCTAGGGTTCCACAA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000207115.2 ENSMUST00000208607.2 |
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CDS-3UTR CCA 90 bp | GCAGAACAGGATGTAGAAGACAACCAGGGCTATAAAGAAGCTGGTAGACACCATCAATGGCGTCATGGATaGTGGCTGAGAAGCCAAGAA | + |
Preference number: 4 (lower is better) Translates to: AEQDVEDNQGYKEAGRHHQWRHG*WLRSQE Trigger: TTCTTGGCTTCTCAGCCACCATCCATGACGCCATTG...ATGGTGTCTACCAGCTTCTTTATAGCCCTGGTTGTCTTCTACATCCTGTTCTGC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000207115.2 ENSMUST00000208607.2 |
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CDS-3UTR CCA 90 bp | CTTCACTATGTGAGGCCACACGAGGCAGAACAGGATGTAGAAGACAACCAGGGCACAGCCGATGAATATTaGTACCACTTTGAAACCTTG | + |
Preference number: 4 (lower is better) Translates to: LHYVRPHEAEQDVEDNQGTADEY*YHFETL Trigger: CAAGGTTTCAAAGTGGTACCAATATTCATCGGCTGT...GCCCTGGTTGTCTTCTACATCCTGTTCTGCCTCGTGTGGCCTCACATAGTGAAG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000207115.2 ENSMUST00000208371.2 |
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CDS-3UTR CCA 90 bp | TCCTCGGTGGTCCTTTCGACCTTTGTTTTCCAGATGAGGCTATTCGTTCTATGCGCGAAAGAGGAAGCATaGCATCTCGGCGTCTTTAAT | + |
Preference number: 4 (lower is better) Translates to: SSVVLSTFVFQMRLFVLCAKEEA*HLGVFN Trigger: ATTAAAGACGCCGAGATGCCATGCTTCCTCTTTCGC...GCATAGAACGAATAGCCTCATCTGGAAAACAAAGGTCGAAAGGACCACCGAGGA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000207115.2 |
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CDS-3UTR TCA 90 bp | AGGTCAGAGGACAGCTTCACAGAGTCGGCTCTCTCTTTAGATCTCATGAGGCCTAGTCTGCCAGAAAAATaGATTCTTCCCTATTGTAGC | + |
Preference number: 4 (lower is better) Translates to: RSEDSFTESALSLDLMRPSLPEK*ILPYCS Trigger: GCTACAATAGGGAAGAATTCATTTTTCTGGCAGACT...AGGCCTCATGAGATCTAAAGAGAGAGCCGACTCTGTGAAGCTGTCCTCTGACCT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000061193.4 ENSMUST00000208607.2 |
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CDS-3UTR TCA 90 bp | CACGAGGCAGAACAGGATGTAGAAGACAACCAGGGCTATAAAGAAGCTGGTAGACTTGTGAAGGTGTCCTaGTGTGACAATAAGACCACA | + |
Preference number: 4 (lower is better) Translates to: HEAEQDVEDNQGYKEAGRLVKVS*CDNKTT Trigger: TGTGGTCTTATTGTCACATCAGGACACCTTCACAAG...TCTACCAGCTTCTTTATAGCCCTGGTTGTCTTCTACATCCTGTTCTGCCTCGTG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000207115.2 ENSMUST00000208371.2 ENSMUST00000208607.2 |
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CDS-3UTR TCA 90 bp | GTAGAAGACAACCAGGGCTATAAAGAAGCTGGTAGACACCATAACAATGAAGGACTGAGTCACAGTTACTaGAAGGCACTCAGGATCCGC | + |
Preference number: 4 (lower is better) Translates to: VEDNQGYKEAGRHHNNEGLSHSY*KALRIR Trigger: GCGGATCCTGAGTGCCTTTCAGTAACTGTGACTCAG...TCCTTCATTGTTATGGTGTCTACCAGCTTCTTTATAGCCCTGGTTGTCTTCTAC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000207115.2 ENSMUST00000208371.2 |
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CDS-3UTR GCA 90 bp | TATGTGAGGCCACACGAGGCAGAACAGGATGTAGAAGACAACCAGGGCTATAAATGTTACGTCCAATCATaGCCTGTTCAGAGCATCTCT | + |
Preference number: 4 (lower is better) Translates to: YVRPHEAEQDVEDNQGYKCYVQS*PVQSIS Trigger: AGAGATGCTCTGAACAGGGCATGATTGGACGTAACA...TTTATAGCCCTGGTTGTCTTCTACATCCTGTTCTGCCTCGTGTGGCCTCACATA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000207115.2 ENSMUST00000208371.2 |
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CDS-3UTR CCA 90 bp | CACTATGTGAGGCCACACGAGGCAGAACAGGATGTAGAAGACAACCAGGGCTATACAGCCGATGAATATTaGTACCACTTTGAAACCTTG | + |
Preference number: 4 (lower is better) Translates to: HYVRPHEAEQDVEDNQGYTADEY*YHFETL Trigger: CAAGGTTTCAAAGTGGTACCAATATTCATCGGCTGT...ATAGCCCTGGTTGTCTTCTACATCCTGTTCTGCCTCGTGTGGCCTCACATAGTG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000207115.2 ENSMUST00000208371.2 |
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CDS-3UTR TCA 90 bp | GCAGAACAGGATGTAGAAGACAACCAGGGCTATAAAGAAGCTGGTAGACACCATCTTGTGAAGGTGTCCTaGTGTGACAATAAGACCACA | + |
Preference number: 4 (lower is better) Translates to: AEQDVEDNQGYKEAGRHHLVKVS*CDNKTT Trigger: TGTGGTCTTATTGTCACATCAGGACACCTTCACAAG...ATGGTGTCTACCAGCTTCTTTATAGCCCTGGTTGTCTTCTACATCCTGTTCTGC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000207115.2 ENSMUST00000208371.2 ENSMUST00000208607.2 |
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CDS-3UTR CCA 90 bp | TCCTCGGTGGTCCTTTCGACCTTTGTTTTCCAGATGAGGCTATTCGTTCTATGCCATAGAACCTTTTCTTaGATACGAAGGGCCCTATAC | + |
Preference number: 4 (lower is better) Translates to: SSVVLSTFVFQMRLFVLCHRTFS*IRRALY Trigger: GTATAGGGCCCTTCGTATCCAAGAAAAGGTTCTATG...GCATAGAACGAATAGCCTCATCTGGAAAACAAAGGTCGAAAGGACCACCGAGGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000207115.2 ENSMUST00000208607.2 |
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CDS-3UTR CCA 90 bp | TATGTGCTATTGTCTACACCTCTATTGCTCACTAACAACTTGAAGAAGAACTCACCAAGGTACGTGCGCTaGATGCAATTCCCAGGAGCG | + |
Preference number: 4 (lower is better) Translates to: YVLLSTPLLLTNNLKKNSPRYVR*MQFPGA Trigger: CGCTCCTGGGAATTGCATCCAGCGCACGTACCTTGG...TGAGTTCTTCTTCAAGTTGTTAGTGAGCAATAGAGGTGTAGACAATAGCACATA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000207115.2 ENSMUST00000208371.2 |
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CDS-3UTR CCA 90 bp | AAGACAACCAGGGCTATAAAGAAGCTGGTAGACACCATAACAATGAAGGAGGTCGCGAAAGAGGAAGCATaGCATCTCGGCGTCTTTAAT | + |
Preference number: 4 (lower is better) Translates to: KTTRAIKKLVDTITMKEVAKEEA*HLGVFN Trigger: ATTAAAGACGCCGAGATGCCATGCTTCCTCTTTCGC...GACCTCCTTCATTGTTATGGTGTCTACCAGCTTCTTTATAGCCCTGGTTGTCTT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000207115.2 ENSMUST00000208371.2 |
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CDS-3UTR TCA 90 bp | AAGACAACCAGGGCTATAAAGAAGCTGGTAGACACCATAACAATGAAGGAGGTCTGTTGTTCAATGTGTTaGAGAACAAGCCCTTGGGTG | + |
Preference number: 4 (lower is better) Translates to: KTTRAIKKLVDTITMKEVCCSMC*RTSPWV Trigger: CACCCAAGGGCTTGTTCTTCAACACATTGAACAACA...GACCTCCTTCATTGTTATGGTGTCTACCAGCTTCTTTATAGCCCTGGTTGTCTT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000207115.2 ENSMUST00000208371.2 ENSMUST00000208607.2 |
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CDS-3UTR GCA 90 bp | TATGTGAGGCCACACGAGGCAGAACAGGATGTAGAAGACAACCAGGGCTATAAACTCCTTGGGAAAGTCTaGCAGAAAAATGAATTCTTC | + |
Preference number: 4 (lower is better) Translates to: YVRPHEAEQDVEDNQGYKLLGKV*QKNEFF Trigger: GAAGAATTCATTTTTCTGGCAGACTTTCCCAAGGAG...TTTATAGCCCTGGTTGTCTTCTACATCCTGTTCTGCCTCGTGTGGCCTCACATA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000207115.2 ENSMUST00000208371.2 ENSMUST00000208607.2 |
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CDS-3UTR GCA 90 bp | GAAGAACTCAGGTGGGTAGATGCTTTGGGGGATGATGTCATAACAAGGGGAGTTCTCCTTGGGAAAGTCTaGCAGAAAAATGAATTCTTC | + |
Preference number: 4 (lower is better) Translates to: EELRWVDALGDDVITRGVLLGKV*QKNEFF Trigger: GAAGAATTCATTTTTCTGGCAGACTTTCCCAAGGAG...AACTCCCCTTGTTATGACATCATCCCCCAAAGCATCTACCCACCTGAGTTCTTC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 3 transcripts: ENSMUST00000207115.2 ENSMUST00000208371.2 ENSMUST00000208607.2 |
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CDS-3UTR GCA 90 bp | CTCGGTGGTCCTTTCGACCTTTGTTTTCCAGATGAGGCTATTCGTTCTATGCAGCTCCTTGGGAAAGTCTaGCAGAAAAATGAATTCTTC | + |
Preference number: 4 (lower is better) Translates to: LGGPFDLCFPDEAIRSMQLLGKV*QKNEFF Trigger: GAAGAATTCATTTTTCTGGCAGACTTTCCCAAGGAG...CTGCATAGAACGAATAGCCTCATCTGGAAAACAAAGGTCGAAAGGACCACCGAG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000207115.2 ENSMUST00000208607.2 |
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CDS-3UTR GCA 90 bp | CTCGGTGGTCCTTTCGACCTTTGTTTTCCAGATGAGGCTATTCGTTCTATGCAGCAACATAGCTCTCTGTaGGTGATGCATGATGTTTTT | + |
Preference number: 4 (lower is better) Translates to: LGGPFDLCFPDEAIRSMQQHSSL*VMHDVF Trigger: AAAAACATCATGCATCACGCACAGAGAGCTATGTTG...CTGCATAGAACGAATAGCCTCATCTGGAAAACAAAGGTCGAAAGGACCACCGAG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000207115.2 ENSMUST00000208607.2 |
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CDS-3UTR GCA 90 bp | TTGTGGAACCCTAGGCATTACTGTTTGAGGCACCTTGAGTGTAGTTTGCAGAAATGTTACGTCCAATCATaGCCTGTTCAGAGCATCTCT | + |
Preference number: 4 (lower is better) Translates to: LWNPRHYCLRHLECSLQKCYVQS*PVQSIS Trigger: AGAGATGCTCTGAACAGGGCATGATTGGACGTAACA...TTTCTGCAAACTACACTCAAGGTGCCTCAAACAGTAATGCCTAGGGTTCCACAA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000207115.2 |
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CDS-3UTR CCA 90 bp | GTGCTATTGTCTACACCTCTATTGCTCACTAACAACTTGAAGAAGAACTCAGGTCTGAGAAGCCAAGAATaGGACAGTAGAAGGAGCCGA | + |
Preference number: 4 (lower is better) Translates to: VLLSTPLLLTNNLKKNSGLRSQE*DSRRSR Trigger: TCGGCTCCTTCTACTGTCCCATTCTTGGCTTCTCAG...ACCTGAGTTCTTCTTCAAGTTGTTAGTGAGCAATAGAGGTGTAGACAATAGCAC 44% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000207115.2 ENSMUST00000208607.2 |
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CDS-3UTR CCA 90 bp | TATGTGCTATTGTCTACACCTCTATTGCTCACTAACAACTTGAAGAAGAACTCAGTGGCAATGGCGTCATaGATGGTGGCTGAGAAGCCA | + |
Preference number: 4 (lower is better) Translates to: YVLLSTPLLLTNNLKKNSVAMAS*MVAEKP Trigger: TGGCTTCTCAGCCACCATCCATGACGCCATTGCCAC...TGAGTTCTTCTTCAAGTTGTTAGTGAGCAATAGAGGTGTAGACAATAGCACATA 44% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000207115.2 ENSMUST00000208607.2 |
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CDS-3UTR TCA 90 bp | AAGGCACTCAGGATCCGCTATTGTCACAGCAATTGCCAGCTTCTTATCCACATTAGTCTGCCAGAAAAATaGATTCTTCCCTATTGTAGC | + |
Preference number: 4 (lower is better) Translates to: KALRIRYCHSNCQLLIHISLPEK*ILPYCS Trigger: GCTACAATAGGGAAGAATTCATTTTTCTGGCAGACT...AATGTGGATAAGAAGCTGGCAATTGCTGTGACAATAGCGGATCCTGAGTGCCTT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000208607.2 |
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CDS-3UTR TCA 90 bp | TTGTGGAACCCTAGGCATTACTGTTTGAGGCACCTTGAGTGTAGTTTGCAGAAAGGCACATCAATTAAATaGATCTCCTTGAAAGGGCAC | + |
Preference number: 4 (lower is better) Translates to: LWNPRHYCLRHLECSLQKGTSIK*ISLKGH Trigger: GTGCCCTTTCAAGGAGATTCATTTAATTGATGTGCC...TTTCTGCAAACTACACTCAAGGTGCCTCAAACAGTAATGCCTAGGGTTCCACAA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000207115.2 ENSMUST00000208607.2 |
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CDS-3UTR TCA 90 bp | GTAGAAGACAACCAGGGCTATAAAGAAGCTGGTAGACACCATAACAATGAAGGACTTGTGAAGGTGTCCTaGTGTGACAATAAGACCACA | + |
Preference number: 4 (lower is better) Translates to: VEDNQGYKEAGRHHNNEGLVKVS*CDNKTT Trigger: TGTGGTCTTATTGTCACATCAGGACACCTTCACAAG...TCCTTCATTGTTATGGTGTCTACCAGCTTCTTTATAGCCCTGGTTGTCTTCTAC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000207115.2 ENSMUST00000208371.2 ENSMUST00000208607.2 |
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CDS-3UTR TCA 90 bp | TATGTGCTATTGTCTACACCTCTATTGCTCACTAACAACTTGAAGAAGAACTCACTGAGTCACAGTTACTaGAAGGCACTCAGGATCCGC | + |
Preference number: 4 (lower is better) Translates to: YVLLSTPLLLTNNLKKNSLSHSY*KALRIR Trigger: GCGGATCCTGAGTGCCTTTCAGTAACTGTGACTCAG...TGAGTTCTTCTTCAAGTTGTTAGTGAGCAATAGAGGTGTAGACAATAGCACATA 43% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000207115.2 ENSMUST00000208371.2 |
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CDS-3UTR GCA 90 bp | GCCATCTTGAAAATAAAAGATTCTGACATTCTGACAGTTAACTACAGCTGTGCTCACGAACCCATCTGCTaGTGCCATGGCTTTTGTCGA | + |
Preference number: 4 (lower is better) Translates to: AILKIKDSDILTVNYSCAHEPIC*CHGFCR Trigger: TCGACAAAAGCCATGGCAGCAGCAGATGGGTTCGTG...AGCACAGCTGTAGTTAACTGTCAGAATGTCAGAATCTTTTATTTTCAAGATGGC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000061193.4 ENSMUST00000208607.2 |
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CDS-3UTR CCA 90 bp | AAGCAAAAGGTTTATTTTCCAGCATGTCAGGGTCAACCTTCAATTAGTTCCTCAAGGGCTTATCATACTTaGAGTGCAGCCACAGCAGGT | + |
Preference number: 4 (lower is better) Translates to: KQKVYFPACQGQPSISSSRAYHT*SAATAG Trigger: ACCTGCTGTGGCTGCACTCCAAGTATGATAAGCCCT...TGAGGAACTAATTGAAGGTTGACCCTGACATGCTGGAAAATAAACCTTTTGCTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000061193.4 ENSMUST00000208607.2 |
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CDS-3UTR TCA 90 bp | GAACAGGATGTAGAAGACAACCAGGGCTATAAAGAAGCTGGTAGACACCATAACACGGTAGAAATTGACTaGGTACATGTAGTTGATCTG | + |
Preference number: 4 (lower is better) Translates to: EQDVEDNQGYKEAGRHHNTVEID*VHVVDL Trigger: CAGATCAACTACATGTACTCAGTCAATTTCTACCGT...GTTATGGTGTCTACCAGCTTCTTTATAGCCCTGGTTGTCTTCTACATCCTGTTC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000207115.2 ENSMUST00000208607.2 |
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CDS-3UTR TCA 90 bp | CCTTTCGACCTTTGTTTTCCAGATGAGGCTATTCGTTCTATGCAGGCCCATATACTGGAAATTAGAATCTaGGAACAGGATGGACTTTTC | + |
Preference number: 4 (lower is better) Translates to: PFDLCFPDEAIRSMQAHILEIRI*EQDGLF Trigger: GAAAAGTCCATCCTGTTCTCAGATTCTAATTTCCAG...TATATGGGCCTGCATAGAACGAATAGCCTCATCTGGAAAACAAAGGTCGAAAGG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000207115.2 ENSMUST00000208607.2 |
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CDS-3UTR TCA 90 bp | GAACAGGATGTAGAAGACAACCAGGGCTATAAAGAAGCTGGTAGACACCATAACAGTCTGCCAGAAAAATaGATTCTTCCCTATTGTAGC | + |
Preference number: 4 (lower is better) Translates to: EQDVEDNQGYKEAGRHHNSLPEK*ILPYCS Trigger: GCTACAATAGGGAAGAATTCATTTTTCTGGCAGACT...GTTATGGTGTCTACCAGCTTCTTTATAGCCCTGGTTGTCTTCTACATCCTGTTC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000207115.2 ENSMUST00000208371.2 ENSMUST00000208607.2 |
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CDS-3UTR GCA 90 bp | CTATTGTCTACACCTCTATTGCTCACTAACAACTTGAAGAAGAACTCAGGTGGGTGGAAGGAAGACTTTTaGATCTTCTGCAGGTTATGG | + |
Preference number: 4 (lower is better) Translates to: LLSTPLLLTNNLKKNSGGWKEDF*IFCRLW Trigger: CCATAACCTGCAGAAGATGCAAAAGTCTTCCTTCCA...CCCACCTGAGTTCTTCTTCAAGTTGTTAGTGAGCAATAGAGGTGTAGACAATAG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000208607.2 |
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CDS-3UTR CCA 90 bp | GTAGAAGACAACCAGGGCTATAAAGAAGCTGGTAGACACCATAACAATGAAGGACATAGAACCTTTTCTTaGATACGAAGGGCCCTATAC | + |
Preference number: 4 (lower is better) Translates to: VEDNQGYKEAGRHHNNEGHRTFS*IRRALY Trigger: GTATAGGGCCCTTCGTATCCAAGAAAAGGTTCTATG...TCCTTCATTGTTATGGTGTCTACCAGCTTCTTTATAGCCCTGGTTGTCTTCTAC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000207115.2 ENSMUST00000208607.2 |
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CDS-3UTR GCA 90 bp | CTATTGTCTACACCTCTATTGCTCACTAACAACTTGAAGAAGAACTCAGGTGGGCAACATAGCTCTCTGTaGGTGATGCATGATGTTTTT | + |
Preference number: 4 (lower is better) Translates to: LLSTPLLLTNNLKKNSGGQHSSL*VMHDVF Trigger: AAAAACATCATGCATCACGCACAGAGAGCTATGTTG...CCCACCTGAGTTCTTCTTCAAGTTGTTAGTGAGCAATAGAGGTGTAGACAATAG 41% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000207115.2 ENSMUST00000208607.2 |
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CDS-3UTR GCA 90 bp | CCTTTCGACCTTTGTTTTCCAGATGAGGCTATTCGTTCTATGCAGGCCCATATATATTGTCACAGCAATTaGCAGCTTCTTATCCACATT | + |
Preference number: 4 (lower is better) Translates to: PFDLCFPDEAIRSMQAHIYCHSN*QLLIHI Trigger: AATGTGGATAAGAAGCTGGCAATTGCTGTGACAATA...TATATGGGCCTGCATAGAACGAATAGCCTCATCTGGAAAACAAAGGTCGAAAGG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000207115.2 |
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CDS-3UTR CCA 90 bp | GCCATCTTGAAAATAAAAGATTCTGACATTCTGACAGTTAACTACAGCTGTGCTGCGAAAGAGGAAGCATaGCATCTCGGCGTCTTTAAT | + |
Preference number: 4 (lower is better) Translates to: AILKIKDSDILTVNYSCAAKEEA*HLGVFN Trigger: ATTAAAGACGCCGAGATGCCATGCTTCCTCTTTCGC...AGCACAGCTGTAGTTAACTGTCAGAATGTCAGAATCTTTTATTTTCAAGATGGC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000061193.4 |
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CDS-3UTR TCA 90 bp | GCCATCTTGAAAATAAAAGATTCTGACATTCTGACAGTTAACTACAGCTGTGCTCCGGACAGGAAAAGTTaGTTTGCAGGTAGTAAGGAA | + |
Preference number: 4 (lower is better) Translates to: AILKIKDSDILTVNYSCAPDRKS*FAGSKE Trigger: TTCCTTACTACCTGCAAATCAACTTTTCCTGTCCGG...AGCACAGCTGTAGTTAACTGTCAGAATGTCAGAATCTTTTATTTTCAAGATGGC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000061193.4 ENSMUST00000208607.2 |
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CDS-3UTR TCA 90 bp | GAGAGCTCCTTTATCTGCTGTGCCATCTTGAAAATAAAAGATTCTGACATTCTGTTAAGAAGGACATCCTaGGTCACAGTTACTGAAAGG | + |
Preference number: 4 (lower is better) Translates to: ESSFICCAILKIKDSDILLRRTS*VTVTER Trigger: CCTTTCAGTAACTGTGACTCAGGATGTCCTTCTTAA...CAGAATGTCAGAATCTTTTATTTTCAAGATGGCACAGCAGATAAAGGAGCTCTC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000061193.4 |
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CDS-3UTR GCA 90 bp | GAGAGCTCCTTTATCTGCTGTGCCATCTTGAAAATAAAAGATTCTGACATTCTGTGGAAGGAAGACTTTTaGATCTTCTGCAGGTTATGG | + |
Preference number: 4 (lower is better) Translates to: ESSFICCAILKIKDSDILWKEDF*IFCRLW Trigger: CCATAACCTGCAGAAGATGCAAAAGTCTTCCTTCCA...CAGAATGTCAGAATCTTTTATTTTCAAGATGGCACAGCAGATAAAGGAGCTCTC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000061193.4 ENSMUST00000208607.2 |
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CDS-3UTR GCA 90 bp | CTATTGTCTACACCTCTATTGCTCACTAACAACTTGAAGAAGAACTCAGGTGGGTATTGTCACAGCAATTaGCAGCTTCTTATCCACATT | + |
Preference number: 4 (lower is better) Translates to: LLSTPLLLTNNLKKNSGGYCHSN*QLLIHI Trigger: AATGTGGATAAGAAGCTGGCAATTGCTGTGACAATA...CCCACCTGAGTTCTTCTTCAAGTTGTTAGTGAGCAATAGAGGTGTAGACAATAG 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000207115.2 ENSMUST00000208371.2 |
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3UTR CAA 72 bp | GTCAGGCTTGAGAGCTCCTTTATCTGCTGTGCCATCTaGAAAATAAAAGATTCTGACATTCTGACAGTTAAC | + |
Preference number: 4 (lower is better) Translates to: VRLESSFICCAI*KIKDSDILTVN Trigger: GTTAACTGTCAGAATGTCAGAATCTTTTATTTTCAAGATGGCACAGCAGATAAAGGAGCTCTCAAGCCTGAC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000061193.4 ENSMUST00000208607.2 |
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CDS-3UTR TCA 90 bp | TATGTGCTATTGTCTACACCTCTATTGCTCACTAACAACTTGAAGAAGAACTCAAGTCTGCCAGAAAAATaGATTCTTCCCTATTGTAGC | + |
Preference number: 4 (lower is better) Translates to: YVLLSTPLLLTNNLKKNSSLPEK*ILPYCS Trigger: GCTACAATAGGGAAGAATTCATTTTTCTGGCAGACT...TGAGTTCTTCTTCAAGTTGTTAGTGAGCAATAGAGGTGTAGACAATAGCACATA 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000207115.2 ENSMUST00000208371.2 ENSMUST00000208607.2 |
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CDS-3UTR CCA 90 bp | GCCATCTTGAAAATAAAAGATTCTGACATTCTGACAGTTAACTACAGCTGTGCTACAGCCGATGAATATTaGTACCACTTTGAAACCTTG | + |
Preference number: 4 (lower is better) Translates to: AILKIKDSDILTVNYSCATADEY*YHFETL Trigger: CAAGGTTTCAAAGTGGTACCAATATTCATCGGCTGT...AGCACAGCTGTAGTTAACTGTCAGAATGTCAGAATCTTTTATTTTCAAGATGGC 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000061193.4 |
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3UTR CAA 72 bp | TGTTCAGAGCATCTCTTTTTATCTATGACTTTAATCTaGTTGATCACTGCGTTGCGATTAAGAAGGACATCC | + |
Preference number: 4 (lower is better) Translates to: CSEHLFLSMTLI*LITALRLRRTS Trigger: GGATGTCCTTCTTAATCGCAACGCAGTGATCAACAAGATTAAAGTCATAGATAAAAAGAGATGCTCTGAACA 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000208607.2 |
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CDS-3UTR GCA 90 bp | ATCTTGAAAATAAAAGATTCTGACATTCTGACAGTTAACTACAGCTGTGCTGGTCTCCTTGGGAAAGTCTaGCAGAAAAATGAATTCTTC | + |
Preference number: 4 (lower is better) Translates to: ILKIKDSDILTVNYSCAGLLGKV*QKNEFF Trigger: GAAGAATTCATTTTTCTGGCAGACTTTCCCAAGGAG...ACCAGCACAGCTGTAGTTAACTGTCAGAATGTCAGAATCTTTTATTTTCAAGAT 37% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000061193.4 ENSMUST00000208607.2 |
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CDS-3UTR GCA 90 bp | ATCTTGAAAATAAAAGATTCTGACATTCTGACAGTTAACTACAGCTGTGCTGGTTATTGTCACAGCAATTaGCAGCTTCTTATCCACATT | + |
Preference number: 4 (lower is better) Translates to: ILKIKDSDILTVNYSCAGYCHSN*QLLIHI Trigger: AATGTGGATAAGAAGCTGGCAATTGCTGTGACAATA...ACCAGCACAGCTGTAGTTAACTGTCAGAATGTCAGAATCTTTTATTTTCAAGAT 36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000061193.4 |
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CDS TCA 90 bp | AATGAAGAGCGTGCTCTCGGTGGCAATGGCGTCATGGATGGTGGCTaGGAAGCCAAGAATGGGACAGTAGAAGGAGCCGACCCAGCAACT | + |
Preference number: 5 (lower is better) Translates to: NEERALGGNGVMDGG*EAKNGTVEGADPAT Trigger: AGTTGCTGGGTCGGCTCCTTCTACTGTCCCATTCTTGGCTTCTCAGCCACCATCCATGACGCCATTGCCACCGAGAGCACGCTCTTCATT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000061193.4 ENSMUST00000207115.2 ENSMUST00000208607.2 ENSMUST00000209126.2 |
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CDS-3UTR CAA 90 bp | GACATGAACATTCTAGCAAACCAGAAAGTCCTGGGGAGGTGGCAGGCTGCATTCACCCTGTGCTGCGCATaGGAGCAGCCTCCATCAGAA | + |
Preference number: 5 (lower is better) Translates to: DMNILANQKVLGRWQAAFTLCCA*EQPPSE Trigger: TTCTGATGGAGGCTGCTCCAATGCGCAGCACAGGGT...GAATGCAGCCTGCCACCTCCCCAGGACTTTCTGGTTTGCTAGAATGTTCATGTC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000061193.4 ENSMUST00000208607.2 |
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CDS-3UTR CAA 90 bp | CCCTGCATAACTGGAAGTGGGAGGGGTGACCCTACAGACCAGACCCACCAACTGTTGATGGTGGACTCCTaGGGAAAGTCTGCCAGAAAA | + |
Preference number: 5 (lower is better) Translates to: PCITGSGRGDPTDQTHQLLMVDS*GKSARK Trigger: TTTTCTGGCAGACTTTCCCAAGGAGTCCACCATCAA...CAGTTGGTGGGTCTGGTCTGTAGGGTCACCCCTCCCACTTCCAGTTATGCAGGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000207115.2 ENSMUST00000208607.2 |
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CDS-3UTR CAA 90 bp | TCCTCAAGGCCAGTGTTGAGGTCAGAGGACAGCTTCACAGAGTCGGCTCTCTCTACCACTGTGAAGGGTTaGGGCAGGTTGTACTCCATC | + |
Preference number: 5 (lower is better) Translates to: SSRPVLRSEDSFTESALSTTVKG*GRLYSI Trigger: GATGGAGTACAACCTGCCCAAACCCTTCACAGTGGT...AGAGAGAGCCGACTCTGTGAAGCTGTCCTCTGACCTCAACACTGGCCTTGAGGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000061193.4 ENSMUST00000208607.2 |
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CDS-3UTR CAA 90 bp | AGACCCAGGCCTTCACTATGTGAGGCCACACGAGGCAGAACAGGATGTAGAAGAACCACTGTGAAGGGTTaGGGCAGGTTGTACTCCATC | + |
Preference number: 5 (lower is better) Translates to: RPRPSLCEATRGRTGCRRTTVKG*GRLYSI Trigger: GATGGAGTACAACCTGCCCAAACCCTTCACAGTGGT...TCTTCTACATCCTGTTCTGCCTCGTGTGGCCTCACATAGTGAAGGCCTGGGTCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000207115.2 ENSMUST00000208607.2 |
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CDS CCA 90 bp | CTGCCAGAGTCGCCAGTCACCAAGTCTTGGACTAAGAAGAAGGGCTaGAATAAGTCGCGAAAGAGGAAGCATGGCATCTCGGCGTCTTTA | + |
Preference number: 5 (lower is better) Translates to: LPESPVTKSWTKKKG*NKSRKRKHGISASL Trigger: TAAAGACGCCGAGATGCCATGCTTCCTCTTTCGCGACTTATTCCAGCCCTTCTTCTTAGTCCAAGACTTGGTGACTGGCGACTCTGGCAG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000061193.4 ENSMUST00000207115.2 ENSMUST00000208371.2 ENSMUST00000209126.2 |
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CDS-3UTR CAA 90 bp | TATGTGAGGCCACACGAGGCAGAACAGGATGTAGAAGACAACCAGGGCTATAAAACCCTGTGCTGCGCATaGGAGCAGCCTCCATCAGAA | + |
Preference number: 5 (lower is better) Translates to: YVRPHEAEQDVEDNQGYKTLCCA*EQPPSE Trigger: TTCTGATGGAGGCTGCTCCAATGCGCAGCACAGGGT...TTTATAGCCCTGGTTGTCTTCTACATCCTGTTCTGCCTCGTGTGGCCTCACATA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000207115.2 ENSMUST00000208607.2 |
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CDS-3UTR CAA 90 bp | CTTCACAGAGTCGGCTCTCTCTTTAGATCTCATGAGGCCTGGGGATCAAACCCAACCACTGTGAAGGGTTaGGGCAGGTTGTACTCCATC | + |
Preference number: 5 (lower is better) Translates to: LHRVGSLFRSHEAWGSNPTTVKG*GRLYSI Trigger: GATGGAGTACAACCTGCCCAAACCCTTCACAGTGGT...TGGGTTTGATCCCCAGGCCTCATGAGATCTAAAGAGAGAGCCGACTCTGTGAAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000061193.4 ENSMUST00000208607.2 |
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CDS-3UTR CAA 90 bp | CTCTCTTTAGATCTCATGAGGCCTGGGGATCAAACCCAGGTTGTCAGGCTTGAGAGAATGCCCAAAGGTTaGGTTTTCTCGGCCACACAG | + |
Preference number: 5 (lower is better) Translates to: LSLDLMRPGDQTQVVRLERMPKG*VFSATQ Trigger: CTGTGTGGCCGAGAAAACCAAACCTTTGGGCATTCT...CTCAAGCCTGACAACCTGGGTTTGATCCCCAGGCCTCATGAGATCTAAAGAGAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000061193.4 ENSMUST00000208607.2 |
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CDS-3UTR CAA 90 bp | AGAGTCGGCTCTCTCTTTAGATCTCATGAGGCCTGGGGATCAAACCCAGGTTGTCGAGTCTGTCAACTTTaGGAACACCTTGGCCACTGT | + |
Preference number: 5 (lower is better) Translates to: RVGSLFRSHEAWGSNPGCRVCQL*EHLGHC Trigger: ACAGTGGCCAAGGTGTTCCAAAAGTTGACAGACTCG...ACAACCTGGGTTTGATCCCCAGGCCTCATGAGATCTAAAGAGAGAGCCGACTCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000061193.4 ENSMUST00000208607.2 |
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CDS-3UTR CAA 90 bp | CTTCACTATGTGAGGCCACACGAGGCAGAACAGGATGTAGAAGACAACCAGGGCTTGATGGTGGACTCCTaGGGAAAGTCTGCCAGAAAA | + |
Preference number: 5 (lower is better) Translates to: LHYVRPHEAEQDVEDNQGLMVDS*GKSARK Trigger: TTTTCTGGCAGACTTTCCCAAGGAGTCCACCATCAA...GCCCTGGTTGTCTTCTACATCCTGTTCTGCCTCGTGTGGCCTCACATAGTGAAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000207115.2 ENSMUST00000208371.2 ENSMUST00000208607.2 |
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CDS-3UTR CAA 90 bp | CTCAAGGCCAGTGTTGAGGTCAGAGGACAGCTTCACAGAGTCGGCTCTCTCTTTAGGTGGGTAGATGCTTaGGGGGATGATGTCATAACA | + |
Preference number: 5 (lower is better) Translates to: LKASVEVRGQLHRVGSLFRWVDA*GDDVIT Trigger: TGTTATGACATCATCCCCCAAAGCATCTACCCACCT...AAAGAGAGAGCCGACTCTGTGAAGCTGTCCTCTGACCTCAACACTGGCCTTGAG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000061193.4 |
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CDS-3UTR CAA 90 bp | AGGTGGGTAGATGCTTTGGGGGATGATGTCATAACAAGGGGAGTTCTCCAAGCACGAGTCTGTCAACTTTaGGAACACCTTGGCCACTGT | + |
Preference number: 5 (lower is better) Translates to: RWVDALGDDVITRGVLQARVCQL*EHLGHC Trigger: ACAGTGGCCAAGGTGTTCCAAAAGTTGACAGACTCG...TGCTTGGAGAACTCCCCTTGTTATGACATCATCCCCCAAAGCATCTACCCACCT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000208607.2 |
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CDS-3UTR CAA 90 bp | TCAAGGCCAGTGTTGAGGTCAGAGGACAGCTTCACAGAGTCGGCTCTCTCTTTATTGATGGTGGACTCCTaGGGAAAGTCTGCCAGAAAA | + |
Preference number: 5 (lower is better) Translates to: SRPVLRSEDSFTESALSLLMVDS*GKSARK Trigger: TTTTCTGGCAGACTTTCCCAAGGAGTCCACCATCAA...TAAAGAGAGAGCCGACTCTGTGAAGCTGTCCTCTGACCTCAACACTGGCCTTGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000061193.4 ENSMUST00000208607.2 |
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CDS-3UTR CAA 90 bp | AGAGTCGGCTCTCTCTTTAGATCTCATGAGGCCTGGGGATCAAACCCAGGTTGTGCGAGTGTGTTATTGTaGTGGAAGCCCAAGGATTCA | + |
Preference number: 5 (lower is better) Translates to: RVGSLFRSHEAWGSNPGCASVLL*WKPKDS Trigger: TGAATCCTTGGGCTTCCACAACAATAACACACTCGC...ACAACCTGGGTTTGATCCCCAGGCCTCATGAGATCTAAAGAGAGAGCCGACTCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000061193.4 ENSMUST00000208607.2 |
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CDS-3UTR CAA 90 bp | TCGGCTCTCTCTTTAGATCTCATGAGGCCTGGGGATCAAACCCAGGTTGTCAGGGTAAACCAGTTGCCCTaGTCTAGGAAGAAAAGATCG | + |
Preference number: 5 (lower is better) Translates to: SALSLDLMRPGDQTQVVRVNQLP*SRKKRS Trigger: CGATCTTTTCTTCCTAGACAAGGGCAACTGGTTTAC...CCTGACAACCTGGGTTTGATCCCCAGGCCTCATGAGATCTAAAGAGAGAGCCGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000061193.4 ENSMUST00000208607.2 |
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CDS-3UTR CAA 90 bp | TCGGCTCTCTCTTTAGATCTCATGAGGCCTGGGGATCAAACCCAGGTTGTCAGGATGGAAGGAAGACTTTaGCATCTTCTGCAGGTTATG | + |
Preference number: 5 (lower is better) Translates to: SALSLDLMRPGDQTQVVRMEGRL*HLLQVM Trigger: CATAACCTGCAGAAGATGCAAAAGTCTTCCTTCCAT...CCTGACAACCTGGGTTTGATCCCCAGGCCTCATGAGATCTAAAGAGAGAGCCGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000061193.4 ENSMUST00000208607.2 |
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CDS-3UTR CAA 90 bp | GTCGGCTCTCTCTTTAGATCTCATGAGGCCTGGGGATCAAACCCAGGTTGTCAGATGGAAGGAAGACTTTaGCATCTTCTGCAGGTTATG | + |
Preference number: 5 (lower is better) Translates to: VGSLFRSHEAWGSNPGCQMEGRL*HLLQVM Trigger: CATAACCTGCAGAAGATGCAAAAGTCTTCCTTCCAT...CTGACAACCTGGGTTTGATCCCCAGGCCTCATGAGATCTAAAGAGAGAGCCGAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000061193.4 ENSMUST00000208607.2 |
||
CDS-3UTR CAA 90 bp | AGGTGGGTAGATGCTTTGGGGGATGATGTCATAACAAGGGGAGTTCTCCAAGCAGCGAGTGTGTTATTGTaGTGGAAGCCCAAGGATTCA | + |
Preference number: 5 (lower is better) Translates to: RWVDALGDDVITRGVLQAASVLL*WKPKDS Trigger: TGAATCCTTGGGCTTCCACAACAATAACACACTCGC...TGCTTGGAGAACTCCCCTTGTTATGACATCATCCCCCAAAGCATCTACCCACCT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000207115.2 ENSMUST00000208607.2 |
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CDS-3UTR CAA 90 bp | AGGTGGGTAGATGCTTTGGGGGATGATGTCATAACAAGGGGAGTTCTCCAAGCAACAGCGAGTGTGTTATaGTTGTGGAAGCCCAAGGAT | + |
Preference number: 5 (lower is better) Translates to: RWVDALGDDVITRGVLQATASVL*LWKPKD Trigger: ATCCTTGGGCTTCCACAACAATAACACACTCGCTGT...TGCTTGGAGAACTCCCCTTGTTATGACATCATCCCCCAAAGCATCTACCCACCT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000207115.2 ENSMUST00000208607.2 |
||
CDS-3UTR CAA 90 bp | GATGATGTCATAACAAGGGGAGTTCTCCAAGCACAGCCACCAACTGTGGACTGGGTAAACCAGTTGCCCTaGTCTAGGAAGAAAAGATCG | + |
Preference number: 5 (lower is better) Translates to: DDVITRGVLQAQPPTVDWVNQLP*SRKKRS Trigger: CGATCTTTTCTTCCTAGACAAGGGCAACTGGTTTAC...CCAGTCCACAGTTGGTGGCTGTGCTTGGAGAACTCCCCTTGTTATGACATCATC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000208371.2 |
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CDS-3UTR CAA 90 bp | CTCAAGGCCAGTGTTGAGGTCAGAGGACAGCTTCACAGAGTCGGCTCTCTCTTTCTATTGTCACAGCAATaGCCAGCTTCTTATCCACAT | + |
Preference number: 5 (lower is better) Translates to: LKASVEVRGQLHRVGSLFLLSQQ*PASYPH Trigger: ATGTGGATAAGAAGCTGGCAATTGCTGTGACAATAG...AAAGAGAGAGCCGACTCTGTGAAGCTGTCCTCTGACCTCAACACTGGCCTTGAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000061193.4 |
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CDS-3UTR CAA 90 bp | AGACCCAGGCCTTCACTATGTGAGGCCACACGAGGCAGAACAGGATGTAGAAGACTATTGTCACAGCAATaGCCAGCTTCTTATCCACAT | + |
Preference number: 5 (lower is better) Translates to: RPRPSLCEATRGRTGCRRLLSQQ*PASYPH Trigger: ATGTGGATAAGAAGCTGGCAATTGCTGTGACAATAG...TCTTCTACATCCTGTTCTGCCTCGTGTGGCCTCACATAGTGAAGGCCTGGGTCT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000207115.2 ENSMUST00000208371.2 |
||
CDS-3UTR CAA 90 bp | CTTCACTATGTGAGGCCACACGAGGCAGAACAGGATGTAGAAGACAACCAGGGCCTATTGTCACAGCAATaGCCAGCTTCTTATCCACAT | + |
Preference number: 5 (lower is better) Translates to: LHYVRPHEAEQDVEDNQGLLSQQ*PASYPH Trigger: ATGTGGATAAGAAGCTGGCAATTGCTGTGACAATAG...GCCCTGGTTGTCTTCTACATCCTGTTCTGCCTCGTGTGGCCTCACATAGTGAAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000207115.2 ENSMUST00000208371.2 |
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CDS GCA 90 bp | AAGCCTACCTTCTCGAACTTGTTCAGGACAAGAAGCCAGGTGCAATaGTGTAAAGCATCTTCAGCCCACGACTTCAATGACAGCAATAGC | + |
Preference number: 5 (lower is better) Translates to: KPTFSNLFRTRSQVQ*CKASSAHDFNDSNS Trigger: GCTATTGCTGTCATTGAAGTCGTGGGCTGAAGATGCTTTACAGCATTGCACCTGGCTTCTTGTCCTGAACAAGTTCGAGAAGGTAGGCTT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000061193.4 ENSMUST00000208607.2 ENSMUST00000209126.2 |
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CDS-3UTR CAA 90 bp | TTAGATCTCATGAGGCCTGGGGATCAAACCCAGGTTGTCAGGCTTGAGAGCTCCACAGGAAAAGTTGATTaGCAGGTAGTAAGGAAAGCT | + |
Preference number: 5 (lower is better) Translates to: LDLMRPGDQTQVVRLESSTGKVD*QVVRKA Trigger: AGCTTTCCTTACTACCTGCAAATCAACTTTTCCTGT...GGAGCTCTCAAGCCTGACAACCTGGGTTTGATCCCCAGGCCTCATGAGATCTAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000061193.4 ENSMUST00000208607.2 |
||
CDS-3UTR CAA 90 bp | TCCTCAAGGCCAGTGTTGAGGTCAGAGGACAGCTTCACAGAGTCGGCTCTCTCTCAGATGTACAACATGTaGTTCAATGTGTTGAAGAAC | + |
Preference number: 5 (lower is better) Translates to: SSRPVLRSEDSFTESALSQMYNM*FNVLKN Trigger: GTTCTTCAACACATTGAACAACATGTTGTACATCTG...AGAGAGAGCCGACTCTGTGAAGCTGTCCTCTGACCTCAACACTGGCCTTGAGGA 48% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000061193.4 ENSMUST00000208607.2 |
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CDS-3UTR CAA 90 bp | CTCGGTGGTCCTTTCGACCTTTGTTTTCCAGATGAGGCTATTCGTTCTATGCAGACAGCGAGTGTGTTATaGTTGTGGAAGCCCAAGGAT | + |
Preference number: 5 (lower is better) Translates to: LGGPFDLCFPDEAIRSMQTASVL*LWKPKD Trigger: ATCCTTGGGCTTCCACAACAATAACACACTCGCTGT...CTGCATAGAACGAATAGCCTCATCTGGAAAACAAAGGTCGAAAGGACCACCGAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000207115.2 ENSMUST00000208607.2 |
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CDS-3UTR CAA 90 bp | AGACCCAGGCCTTCACTATGTGAGGCCACACGAGGCAGAACAGGATGTAGAAGATCTATGACTTTAATCTaGTTGATCACTGCGTTGCGA | + |
Preference number: 5 (lower is better) Translates to: RPRPSLCEATRGRTGCRRSMTLI*LITALR Trigger: TCGCAACGCAGTGATCAACAAGATTAAAGTCATAGA...TCTTCTACATCCTGTTCTGCCTCGTGTGGCCTCACATAGTGAAGGCCTGGGTCT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000207115.2 ENSMUST00000208371.2 |
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CDS-3UTR CAA 90 bp | TCCTCAAGGCCAGTGTTGAGGTCAGAGGACAGCTTCACAGAGTCGGCTCTCTCTATCATAGAAGTCTTCTaGATGTTACGTCCAATCATG | + |
Preference number: 5 (lower is better) Translates to: SSRPVLRSEDSFTESALSIIEVF*MLRPIM Trigger: CATGATTGGACGTAACATCAAGAAGACTTCTATGAT...AGAGAGAGCCGACTCTGTGAAGCTGTCCTCTGACCTCAACACTGGCCTTGAGGA 48% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000061193.4 |
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CDS-3UTR CAA 90 bp | GAGAGCTCCTTTATCTGCTGTGCCATCTTGAAAATAAAAGATTCTGACATTCTGACCCTGTGCTGCGCATaGGAGCAGCCTCCATCAGAA | + |
Preference number: 5 (lower is better) Translates to: ESSFICCAILKIKDSDILTLCCA*EQPPSE Trigger: TTCTGATGGAGGCTGCTCCAATGCGCAGCACAGGGT...CAGAATGTCAGAATCTTTTATTTTCAAGATGGCACAGCAGATAAAGGAGCTCTC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000061193.4 ENSMUST00000208607.2 |
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CDS-3UTR CAA 90 bp | GCAGAACAGGATGTAGAAGACAACCAGGGCTATAAAGAAGCTGGTAGACACCATTTGATGGTGGACTCCTaGGGAAAGTCTGCCAGAAAA | + |
Preference number: 5 (lower is better) Translates to: AEQDVEDNQGYKEAGRHHLMVDS*GKSARK Trigger: TTTTCTGGCAGACTTTCCCAAGGAGTCCACCATCAA...ATGGTGTCTACCAGCTTCTTTATAGCCCTGGTTGTCTTCTACATCCTGTTCTGC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000207115.2 ENSMUST00000208371.2 ENSMUST00000208607.2 |
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CDS-3UTR CAA 90 bp | AAGCAAAAGGTTTATTTTCCAGCATGTCAGGGTCAACCTTCAATTAGTTCCTCAGTAGGTTTCCCAGCCTaGGGAAGGGACCACCTGGTA | + |
Preference number: 5 (lower is better) Translates to: KQKVYFPACQGQPSISSSVGFPA*GRDHLV Trigger: TACCAGGTGGTCCCTTCCCAAGGCTGGGAAACCTAC...TGAGGAACTAATTGAAGGTTGACCCTGACATGCTGGAAAATAAACCTTTTGCTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000061193.4 ENSMUST00000208607.2 |
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CDS-3UTR CAA 90 bp | GAAGAACTCAGGTGGGTAGATGCTTTGGGGGATGATGTCATAACAAGGGGAGTTAGTAATCCTTGTCCTTaGTTTTGTGTTGCCACCAGC | + |
Preference number: 5 (lower is better) Translates to: EELRWVDALGDDVITRGVSNPCP*FCVATS Trigger: GCTGGTGGCAACACAAAACAAAGGACAAGGATTACT...AACTCCCCTTGTTATGACATCATCCCCCAAAGCATCTACCCACCTGAGTTCTTC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000207115.2 ENSMUST00000208371.2 ENSMUST00000208607.2 |
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CDS-3UTR CAA 90 bp | TATGTGAGGCCACACGAGGCAGAACAGGATGTAGAAGACAACCAGGGCTATAAAGTAAACCAGTTGCCCTaGTCTAGGAAGAAAAGATCG | + |
Preference number: 5 (lower is better) Translates to: YVRPHEAEQDVEDNQGYKVNQLP*SRKKRS Trigger: CGATCTTTTCTTCCTAGACAAGGGCAACTGGTTTAC...TTTATAGCCCTGGTTGTCTTCTACATCCTGTTCTGCCTCGTGTGGCCTCACATA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000207115.2 ENSMUST00000208371.2 ENSMUST00000208607.2 |
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CDS-3UTR CAA 90 bp | CTCTCTTTAGATCTCATGAGGCCTGGGGATCAAACCCAGGTTGTCAGGCTTGAGTACCACTTTGAAACCTaGAATAATTCCCCCAAGGTA | + |
Preference number: 5 (lower is better) Translates to: LSLDLMRPGDQTQVVRLEYHFET*NNSPKV Trigger: TACCTTGGGGGAATTATTCAAGGTTTCAAAGTGGTA...CTCAAGCCTGACAACCTGGGTTTGATCCCCAGGCCTCATGAGATCTAAAGAGAG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000061193.4 |
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CDS-3UTR CAA 90 bp | GTGAGGCCACACGAGGCAGAACAGGATGTAGAAGACAACCAGGGCTATAAAGAATACCACTTTGAAACCTaGAATAATTCCCCCAAGGTA | + |
Preference number: 5 (lower is better) Translates to: VRPHEAEQDVEDNQGYKEYHFET*NNSPKV Trigger: TACCTTGGGGGAATTATTCAAGGTTTCAAAGTGGTA...TTCTTTATAGCCCTGGTTGTCTTCTACATCCTGTTCTGCCTCGTGTGGCCTCAC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000207115.2 ENSMUST00000208371.2 |
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CDS TCA 90 bp | GGAAAAGTTGATTTGCAGGTAGTAAGGAAAGCTCAAATAGTTCTCTaGCGGATCGATTGGCGAGTCTGTCAACTTTTGGAACACCTTGGC | + |
Preference number: 5 (lower is better) Translates to: GKVDLQVVRKAQIVL*RIDWRVCQLLEHLG Trigger: GCCAAGGTGTTCCAAAAGTTGACAGACTCGCCAATCGATCCGTCAGAGAACTATTTGAGCTTTCCTTACTACCTGCAAATCAACTTTTCC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000061193.4 ENSMUST00000208607.2 ENSMUST00000209126.2 |
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CDS TCA 90 bp | CATCAGAATCTGTACATTTTCCATCTCCCAACGGTAGAAATTGACTaGGTACATGTAGTTGATCTGGACCATGGGCTTCATCCCCATCAG | + |
Preference number: 5 (lower is better) Translates to: HQNLYIFHLPTVEID*VHVVDLDHGLHPHQ Trigger: CTGATGGGGATGAAGCCCATGGTCCAGATCAACTACATGTACTCAGTCAATTTCTACCGTTGGGAGATGGAAAATGTACAGATTCTGATG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000061193.4 ENSMUST00000208607.2 ENSMUST00000209126.2 |
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CDS-3UTR CAA 90 bp | CACGAGGCAGAACAGGATGTAGAAGACAACCAGGGCTATAAAGAAGCTGGTAGATGTCCTTTGAAAGAGTaGACCATGTATTTGATGGTG | + |
Preference number: 5 (lower is better) Translates to: HEAEQDVEDNQGYKEAGRCPLKE*TMYLMV Trigger: CACCATCAAATACATGGTCAACTCTTTCAAAGGACA...TCTACCAGCTTCTTTATAGCCCTGGTTGTCTTCTACATCCTGTTCTGCCTCGTG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000207115.2 ENSMUST00000208371.2 ENSMUST00000208607.2 |
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CDS-3UTR CAA 90 bp | AAGACAACCAGGGCTATAAAGAAGCTGGTAGACACCATAACAATGAAGGAGGTCAGTAATCCTTGTCCTTaGTTTTGTGTTGCCACCAGC | + |
Preference number: 5 (lower is better) Translates to: KTTRAIKKLVDTITMKEVSNPCP*FCVATS Trigger: GCTGGTGGCAACACAAAACAAAGGACAAGGATTACT...GACCTCCTTCATTGTTATGGTGTCTACCAGCTTCTTTATAGCCCTGGTTGTCTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000207115.2 ENSMUST00000208371.2 ENSMUST00000208607.2 |
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CDS-3UTR CAA 90 bp | CTATTGTCTACACCTCTATTGCTCACTAACAACTTGAAGAAGAACTCAGGTGGGGTAAACCAGTTGCCCTaGTCTAGGAAGAAAAGATCG | + |
Preference number: 5 (lower is better) Translates to: LLSTPLLLTNNLKKNSGGVNQLP*SRKKRS Trigger: CGATCTTTTCTTCCTAGACAAGGGCAACTGGTTTAC...CCCACCTGAGTTCTTCTTCAAGTTGTTAGTGAGCAATAGAGGTGTAGACAATAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000207115.2 ENSMUST00000208371.2 ENSMUST00000208607.2 |
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CDS-3UTR CAA 90 bp | GCCATCTTGAAAATAAAAGATTCTGACATTCTGACAGTTAACTACAGCTGTGCTAGAATGCCCAAAGGTTaGGTTTTCTCGGCCACACAG | + |
Preference number: 5 (lower is better) Translates to: AILKIKDSDILTVNYSCARMPKG*VFSATQ Trigger: CTGTGTGGCCGAGAAAACCAAACCTTTGGGCATTCT...AGCACAGCTGTAGTTAACTGTCAGAATGTCAGAATCTTTTATTTTCAAGATGGC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000061193.4 ENSMUST00000208607.2 |
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CDS-3UTR CAA 90 bp | GAACAGGATGTAGAAGACAACCAGGGCTATAAAGAAGCTGGTAGACACCATAACTGTCCTTTGAAAGAGTaGACCATGTATTTGATGGTG | + |
Preference number: 5 (lower is better) Translates to: EQDVEDNQGYKEAGRHHNCPLKE*TMYLMV Trigger: CACCATCAAATACATGGTCAACTCTTTCAAAGGACA...GTTATGGTGTCTACCAGCTTCTTTATAGCCCTGGTTGTCTTCTACATCCTGTTC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000207115.2 ENSMUST00000208371.2 ENSMUST00000208607.2 |
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CDS-3UTR CAA 90 bp | GAGAGCTCCTTTATCTGCTGTGCCATCTTGAAAATAAAAGATTCTGACATTCTGGCGAGTGTGTTATTGTaGTGGAAGCCCAAGGATTCA | + |
Preference number: 5 (lower is better) Translates to: ESSFICCAILKIKDSDILASVLL*WKPKDS Trigger: TGAATCCTTGGGCTTCCACAACAATAACACACTCGC...CAGAATGTCAGAATCTTTTATTTTCAAGATGGCACAGCAGATAAAGGAGCTCTC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000061193.4 ENSMUST00000208607.2 |
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CDS-3UTR CAA 90 bp | GAACAGGATGTAGAAGACAACCAGGGCTATAAAGAAGCTGGTAGACACCATAACTACCACTTTGAAACCTaGAATAATTCCCCCAAGGTA | + |
Preference number: 5 (lower is better) Translates to: EQDVEDNQGYKEAGRHHNYHFET*NNSPKV Trigger: TACCTTGGGGGAATTATTCAAGGTTTCAAAGTGGTA...GTTATGGTGTCTACCAGCTTCTTTATAGCCCTGGTTGTCTTCTACATCCTGTTC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000207115.2 ENSMUST00000208371.2 |
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CDS GCA 90 bp | GAAAGAGTTGACCATGTATTTGATGGTGGACTCCTTGGGAAAGTCTaGCAGAAAAATGAATTCTTCCCTATTGTAGCTTTGCAGGATGAA | + |
Preference number: 5 (lower is better) Translates to: ERVDHVFDGGLLGKV*QKNEFFPIVALQDE Trigger: TTCATCCTGCAAAGCTACAATAGGGAAGAATTCATTTTTCTGGCAGACTTTCCCAAGGAGTCCACCATCAAATACATGGTCAACTCTTTC 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 5 transcripts: ENSMUST00000061193.4 ENSMUST00000207115.2 ENSMUST00000208371.2 ENSMUST00000208607.2 ENSMUST00000209126.2 |
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CDS-3UTR CAA 90 bp | GAACAGGATGTAGAAGACAACCAGGGCTATAAAGAAGCTGGTAGACACCATAACCAGATGTACAACATGTaGTTCAATGTGTTGAAGAAC | + |
Preference number: 5 (lower is better) Translates to: EQDVEDNQGYKEAGRHHNQMYNM*FNVLKN Trigger: GTTCTTCAACACATTGAACAACATGTTGTACATCTG...GTTATGGTGTCTACCAGCTTCTTTATAGCCCTGGTTGTCTTCTACATCCTGTTC 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000207115.2 ENSMUST00000208371.2 ENSMUST00000208607.2 |
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CDS-3UTR CAA 90 bp | GCCATCTTGAAAATAAAAGATTCTGACATTCTGACAGTTAACTACAGCTGTGCTACAGCGAGTGTGTTATaGTTGTGGAAGCCCAAGGAT | + |
Preference number: 5 (lower is better) Translates to: AILKIKDSDILTVNYSCATASVL*LWKPKD Trigger: ATCCTTGGGCTTCCACAACAATAACACACTCGCTGT...AGCACAGCTGTAGTTAACTGTCAGAATGTCAGAATCTTTTATTTTCAAGATGGC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000061193.4 ENSMUST00000208607.2 |
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CDS-3UTR CAA 90 bp | GAGAGCTCCTTTATCTGCTGTGCCATCTTGAAAATAAAAGATTCTGACATTCTGAGTAATCCTTGTCCTTaGTTTTGTGTTGCCACCAGC | + |
Preference number: 5 (lower is better) Translates to: ESSFICCAILKIKDSDILSNPCP*FCVATS Trigger: GCTGGTGGCAACACAAAACAAAGGACAAGGATTACT...CAGAATGTCAGAATCTTTTATTTTCAAGATGGCACAGCAGATAAAGGAGCTCTC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000061193.4 ENSMUST00000208607.2 |
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CDS-3UTR CAA 90 bp | TATGTGCTATTGTCTACACCTCTATTGCTCACTAACAACTTGAAGAAGAACTCAAGTAATCCTTGTCCTTaGTTTTGTGTTGCCACCAGC | + |
Preference number: 5 (lower is better) Translates to: YVLLSTPLLLTNNLKKNSSNPCP*FCVATS Trigger: GCTGGTGGCAACACAAAACAAAGGACAAGGATTACT...TGAGTTCTTCTTCAAGTTGTTAGTGAGCAATAGAGGTGTAGACAATAGCACATA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000207115.2 ENSMUST00000208371.2 ENSMUST00000208607.2 |
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CDS-3UTR CAA 90 bp | AAGCAAAAGGTTTATTTTCCAGCATGTCAGGGTCAACCTTCAATTAGTTCCTCACTATGCTGTCTTAGCTaGAACATTGTCCTCTTTCGA | + |
Preference number: 5 (lower is better) Translates to: KQKVYFPACQGQPSISSSLCCLS*NIVLFR Trigger: TCGAAAGAGGACAATGTTCAAGCTAAGACAGCATAG...TGAGGAACTAATTGAAGGTTGACCCTGACATGCTGGAAAATAAACCTTTTGCTT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000061193.4 |
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CDS-3UTR CAA 90 bp | GTGCTATTGTCTACACCTCTATTGCTCACTAACAACTTGAAGAAGAACTCAGGTCAGATGTACAACATGTaGTTCAATGTGTTGAAGAAC | + |
Preference number: 5 (lower is better) Translates to: VLLSTPLLLTNNLKKNSGQMYNM*FNVLKN Trigger: GTTCTTCAACACATTGAACAACATGTTGTACATCTG...ACCTGAGTTCTTCTTCAAGTTGTTAGTGAGCAATAGAGGTGTAGACAATAGCAC 39% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000207115.2 ENSMUST00000208371.2 ENSMUST00000208607.2 |
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CDS-3UTR CAA 90 bp | AAGCAAAAGGTTTATTTTCCAGCATGTCAGGGTCAACCTTCAATTAGTTCCTCATCTATGACTTTAATCTaGTTGATCACTGCGTTGCGA | + |
Preference number: 5 (lower is better) Translates to: KQKVYFPACQGQPSISSSSMTLI*LITALR Trigger: TCGCAACGCAGTGATCAACAAGATTAAAGTCATAGA...TGAGGAACTAATTGAAGGTTGACCCTGACATGCTGGAAAATAAACCTTTTGCTT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000061193.4 |
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CDS-3UTR CAA 90 bp | GTGCTATTGTCTACACCTCTATTGCTCACTAACAACTTGAAGAAGAACTCAGGTATCATAGAAGTCTTCTaGATGTTACGTCCAATCATG | + |
Preference number: 5 (lower is better) Translates to: VLLSTPLLLTNNLKKNSGIIEVF*MLRPIM Trigger: CATGATTGGACGTAACATCAAGAAGACTTCTATGAT...ACCTGAGTTCTTCTTCAAGTTGTTAGTGAGCAATAGAGGTGTAGACAATAGCAC 39% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000207115.2 ENSMUST00000208371.2 |
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CDS-3UTR CAA 90 bp | GAGAGCTCCTTTATCTGCTGTGCCATCTTGAAAATAAAAGATTCTGACATTCTGCAGATGTACAACATGTaGTTCAATGTGTTGAAGAAC | + |
Preference number: 5 (lower is better) Translates to: ESSFICCAILKIKDSDILQMYNM*FNVLKN Trigger: GTTCTTCAACACATTGAACAACATGTTGTACATCTG...CAGAATGTCAGAATCTTTTATTTTCAAGATGGCACAGCAGATAAAGGAGCTCTC 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000061193.4 ENSMUST00000208607.2 |
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CDS-3UTR CAA 90 bp | TATGTGCTATTGTCTACACCTCTATTGCTCACTAACAACTTGAAGAAGAACTCATCTATGACTTTAATCTaGTTGATCACTGCGTTGCGA | + |
Preference number: 5 (lower is better) Translates to: YVLLSTPLLLTNNLKKNSSMTLI*LITALR Trigger: TCGCAACGCAGTGATCAACAAGATTAAAGTCATAGA...TGAGTTCTTCTTCAAGTTGTTAGTGAGCAATAGAGGTGTAGACAATAGCACATA 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000207115.2 ENSMUST00000208371.2 |
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CDS-3UTR CAA 90 bp | ATCTTGAAAATAAAAGATTCTGACATTCTGACAGTTAACTACAGCTGTGCTGGTTGTCCTTTGAAAGAGTaGACCATGTATTTGATGGTG | + |
Preference number: 5 (lower is better) Translates to: ILKIKDSDILTVNYSCAGCPLKE*TMYLMV Trigger: CACCATCAAATACATGGTCAACTCTTTCAAAGGACA...ACCAGCACAGCTGTAGTTAACTGTCAGAATGTCAGAATCTTTTATTTTCAAGAT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000061193.4 ENSMUST00000208607.2 |
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CDS-3UTR CAA 90 bp | TATGTGCTATTGTCTACACCTCTATTGCTCACTAACAACTTGAAGAAGAACTCAATCATAGAAGTCTTCTaGATGTTACGTCCAATCATG | + |
Preference number: 5 (lower is better) Translates to: YVLLSTPLLLTNNLKKNSIIEVF*MLRPIM Trigger: CATGATTGGACGTAACATCAAGAAGACTTCTATGAT...TGAGTTCTTCTTCAAGTTGTTAGTGAGCAATAGAGGTGTAGACAATAGCACATA 37% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000207115.2 ENSMUST00000208371.2 |
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CDS TCA 72 bp | CGTGCTCTCGGTGGCAATGGCGTCATGGATGGTGGCTaGGAAGCCAAGAATGGGACAGTAGAAGGAGCCGAC | + |
Preference number: 6 (lower is better) Translates to: RALGGNGVMDGG*EAKNGTVEGAD Trigger: GTCGGCTCCTTCTACTGTCCCATTCTTGGCTTCTCAGCCACCATCCATGACGCCATTGCCACCGAGAGCACG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000061193.4 ENSMUST00000207115.2 ENSMUST00000208607.2 ENSMUST00000209126.2 |
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CDS CAA 90 bp | TCAGGACGCACATGGCCTCTGCCGGGCAGTACCCTGTGCTGCGCATaGGAGCAGCCTCCATCAGAATCTGTACATTTTCCATCTCCCAAC | + |
Preference number: 6 (lower is better) Translates to: SGRTWPLPGSTLCCA*EQPPSESVHFPSPN Trigger: GTTGGGAGATGGAAAATGTACAGATTCTGATGGAGGCTGCTCCAATGCGCAGCACAGGGTACTGCCCGGCAGAGGCCATGTGCGTCCTGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000061193.4 ENSMUST00000207115.2 ENSMUST00000208607.2 ENSMUST00000209126.2 |
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CDS CCA 72 bp | AGAGCGTGCTCTCGGTGGCAATGGCGTCATGGATGGTaGCTGAGAAGCCAAGAATGGGACAGTAGAAGGAGC | + |
Preference number: 6 (lower is better) Translates to: RACSRWQWRHGW*LRSQEWDSRRS Trigger: GCTCCTTCTACTGTCCCATTCTTGGCTTCTCAGCCACCATCCATGACGCCATTGCCACCGAGAGCACGCTCT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000061193.4 ENSMUST00000207115.2 ENSMUST00000208607.2 ENSMUST00000209126.2 |
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CDS CAA 72 bp | ACATGGCCTCTGCCGGGCAGTACCCTGTGCTGCGCATaGGAGCAGCCTCCATCAGAATCTGTACATTTTCCA | + |
Preference number: 6 (lower is better) Translates to: TWPLPGSTLCCA*EQPPSESVHFP Trigger: TGGAAAATGTACAGATTCTGATGGAGGCTGCTCCAATGCGCAGCACAGGGTACTGCCCGGCAGAGGCCATGT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000061193.4 ENSMUST00000207115.2 ENSMUST00000208607.2 ENSMUST00000209126.2 |
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CDS CAA 72 bp | GCACGTGTGGGTGAAGGAGATCGCCTGGTAGTTCCCTaGGTTCACCACTGTGAAGGGTTTGGGCAGGTTGTA | + |
Preference number: 6 (lower is better) Translates to: ARVGEGDRLVVP*VHHCEGFGQVV Trigger: TACAACCTGCCCAAACCCTTCACAGTGGTGAACCAAGGGAACTACCAGGCGATCTCCTTCACCCACACGTGC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000061193.4 ENSMUST00000207115.2 ENSMUST00000208607.2 ENSMUST00000209126.2 |
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CDS CAA 90 bp | CCCTCATTCTTGCCAGTGGTGAGGGCTAGGACGTACTCAGAACCATaGCCACTGGCATACACCGGGCACAGTCTCTTAATGCACTCGCTA | + |
Preference number: 6 (lower is better) Translates to: PSFLPVVRARTYSEP*PLAYTGHSLLMHSL Trigger: TAGCGAGTGCATTAAGAGACTGTGCCCGGTGTATGCCAGTGGCAATGGTTCTGAGTACGTCCTAGCCCTCACCACTGGCAAGAATGAGGG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000061193.4 ENSMUST00000207115.2 ENSMUST00000208607.2 ENSMUST00000209126.2 |
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CDS CAA 72 bp | TTGCCAGTGGTGAGGGCTAGGACGTACTCAGAACCATaGCCACTGGCATACACCGGGCACAGTCTCTTAATG | + |
Preference number: 6 (lower is better) Translates to: LPVVRARTYSEP*PLAYTGHSLLM Trigger: CATTAAGAGACTGTGCCCGGTGTATGCCAGTGGCAATGGTTCTGAGTACGTCCTAGCCCTCACCACTGGCAA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000061193.4 ENSMUST00000207115.2 ENSMUST00000208607.2 ENSMUST00000209126.2 |
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CDS TCA 72 bp | TCCCGATGTGAATATAACCCTCATTCTTGCCAGTGGTaGGGGCTAGGACGTACTCAGAACCATTGCCACTGG | + |
Preference number: 6 (lower is better) Translates to: SRCEYNPHSCQW*GLGRTQNHCHW Trigger: CCAGTGGCAATGGTTCTGAGTACGTCCTAGCCCTCACCACTGGCAAGAATGAGGGTTATATTCACATCGGGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000061193.4 ENSMUST00000207115.2 ENSMUST00000208607.2 ENSMUST00000209126.2 |
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CDS TCA 72 bp | TGTCCTCGGTGGTCCTTTCGACCTTTGTTTTCCAGATaGGGCTATTCGTTGTGTCCAGCGGGCTGTTGTAAC | + |
Preference number: 6 (lower is better) Translates to: CPRWSFRPLFSR*GYSLCPAGCCN Trigger: GTTACAACAGCCCGCTGGACACAACGAATAGCCTCATCTGGAAAACAAAGGTCGAAAGGACCACCGAGGACA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000061193.4 ENSMUST00000209126.2 |
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CDS CCA 72 bp | TCGCCAGTCACCAAGTCTTGGACTAAGAAGAAGGGCTaGAATAAGTCGCGAAAGAGGAAGCATGGCATCTCG | + |
Preference number: 6 (lower is better) Translates to: SPVTKSWTKKKG*NKSRKRKHGIS Trigger: CGAGATGCCATGCTTCCTCTTTCGCGACTTATTCCAGCCCTTCTTCTTAGTCCAAGACTTGGTGACTGGCGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000061193.4 ENSMUST00000207115.2 ENSMUST00000208371.2 ENSMUST00000209126.2 |
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CDS CAA 72 bp | TTGCATCTTCTGCAGGTTATGGTAGGTTTCCCAGCCTaGGGAAGGGACCACCTGGTATACATCATAGCCACC | + |
Preference number: 6 (lower is better) Translates to: LHLLQVMVGFPA*GRDHLVYIIAT Trigger: GGTGGCTATGATGTATACCAGGTGGTCCCTTCCCAAGGCTGGGAAACCTACCATAACCTGCAGAAGATGCAA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000061193.4 ENSMUST00000208607.2 ENSMUST00000209126.2 |
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CDS TCA 72 bp | GTGGGTCCTTGGCTATCAGAGCTTGTGAAGGTGTCCTaGTGTGACAATAAGACCACAGTGATGGTAAACCAG | + |
Preference number: 6 (lower is better) Translates to: VGPWLSELVKVS*CDNKTTVMVNQ Trigger: CTGGTTTACCATCACTGTGGTCTTATTGTCACATCAGGACACCTTCACAAGCTCTGATAGCCAAGGACCCAC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000061193.4 ENSMUST00000207115.2 ENSMUST00000208371.2 ENSMUST00000209126.2 |
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CDS CAA 72 bp | CGATCCTTGGAGAGATGCAAGCCTACCTTCTCGAACTaGTTCAGGACAAGAAGCCAGGTGCAATGCTGTAAA | + |
Preference number: 6 (lower is better) Translates to: RSLERCKPTFSN*FRTRSQVQCCK Trigger: TTTACAGCATTGCACCTGGCTTCTTGTCCTGAACAAGTTCGAGAAGGTAGGCTTGCATCTCTCCAAGGATCG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000061193.4 ENSMUST00000208607.2 ENSMUST00000209126.2 |
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CDS GCA 72 bp | TTCTCGAACTTGTTCAGGACAAGAAGCCAGGTGCAATaGTGTAAAGCATCTTCAGCCCACGACTTCAATGAC | + |
Preference number: 6 (lower is better) Translates to: FSNLFRTRSQVQ*CKASSAHDFND Trigger: GTCATTGAAGTCGTGGGCTGAAGATGCTTTACAGCATTGCACCTGGCTTCTTGTCCTGAACAAGTTCGAGAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000061193.4 ENSMUST00000208607.2 ENSMUST00000209126.2 |
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CDS TCA 72 bp | CATAGACCTTGGCTATCAGAGCTTGTGAAGGTGTCCTaGTGTGACAATAAGACCACAGTGATGGTAAACCAG | + |
Preference number: 6 (lower is better) Translates to: HRPWLSELVKVS*CDNKTTVMVNQ Trigger: CTGGTTTACCATCACTGTGGTCTTATTGTCACATCAGGACACCTTCACAAGCTCTGATAGCCAAGGTCTATG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000208607.2 |
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CDS CAA 90 bp | GGCTCTTCATTTTCTGTGACAACAGCCATTTGTCCTTTGAAAGAGTaGACCATGTATTTGATGGTGGACTCCTTGGGAAAGTCTGCCAGA | + |
Preference number: 6 (lower is better) Translates to: GSSFSVTTAICPLKE*TMYLMVDSLGKSAR Trigger: TCTGGCAGACTTTCCCAAGGAGTCCACCATCAAATACATGGTCAACTCTTTCAAAGGACAAATGGCTGTTGTCACAGAAAATGAAGAGCC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000208371.2 |
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CDS TCA 72 bp | CCAGCTCCTCGATATTCTGTCCCGGACAGGAAAAGTTaGTTTGCAGGTAGTAAGGAAAGCTCAAATAGTTCT | + |
Preference number: 6 (lower is better) Translates to: PAPRYSVPDRKS*FAGSKESSNSS Trigger: AGAACTATTTGAGCTTTCCTTACTACCTGCAAATCAACTTTTCCTGTCCGGGACAGAATATCGAGGAGCTGG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000061193.4 ENSMUST00000208607.2 ENSMUST00000209126.2 |
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CDS CAA 90 bp | AGCTCTTCATTTTCTGTGACAACAGCCATTTGTCCTTTGAAAGAGTaGACCATGTATTTGATGGTGGACTCCTTGGGAAAGTCTGCCAGA | + |
Preference number: 6 (lower is better) Translates to: SSSFSVTTAICPLKE*TMYLMVDSLGKSAR Trigger: TCTGGCAGACTTTCCCAAGGAGTCCACCATCAAATACATGGTCAACTCTTTCAAAGGACAAATGGCTGTTGTCACAGAAAATGAAGAGCT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000207115.2 |
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CDS TCA 72 bp | CTGTACATTTTCCATCTCCCAACGGTAGAAATTGACTaGGTACATGTAGTTGATCTGGACCATGGGCTTCAT | + |
Preference number: 6 (lower is better) Translates to: LYIFHLPTVEID*VHVVDLDHGLH Trigger: ATGAAGCCCATGGTCCAGATCAACTACATGTACTCAGTCAATTTCTACCGTTGGGAGATGGAAAATGTACAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000061193.4 ENSMUST00000207115.2 ENSMUST00000208607.2 ENSMUST00000209126.2 |
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CDS TCA 72 bp | CAGCTCCAAGAGAACATAGTCCTGGAAATTAGAATCTaGGAACAGGATGGACTTTTCATCATAAAAGCCCCC | + |
Preference number: 6 (lower is better) Translates to: QLQENIVLEIRI*EQDGLFIIKAP Trigger: GGGGGCTTTTATGATGAAAAGTCCATCCTGTTCTCAGATTCTAATTTCCAGGACTATGTTCTCTTGGAGCTG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000061193.4 ENSMUST00000207115.2 ENSMUST00000208607.2 ENSMUST00000209126.2 |
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CDS CAA 72 bp | ACAGCCATTTGTCCTTTGAAAGAGTTGACCATGTATTaGATGGTGGACTCCTTGGGAAAGTCTGCCAGAAAA | + |
Preference number: 6 (lower is better) Translates to: TAICPLKELTMY*MVDSLGKSARK Trigger: TTTTCTGGCAGACTTTCCCAAGGAGTCCACCATCAAATACATGGTCAACTCTTTCAAAGGACAAATGGCTGT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000061193.4 ENSMUST00000207115.2 ENSMUST00000208371.2 ENSMUST00000208607.2 ENSMUST00000209126.2 |
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CDS CAA 90 bp | ATCTCTTCATTTTCTGTGACAACAGCCATTTGTCCTTTGAAAGAGTaGACCATGTATTTGATGGTGGACTCCTTGGGAAAGTCTGCCAGA | + |
Preference number: 6 (lower is better) Translates to: ISSFSVTTAICPLKE*TMYLMVDSLGKSAR Trigger: TCTGGCAGACTTTCCCAAGGAGTCCACCATCAAATACATGGTCAACTCTTTCAAAGGACAAATGGCTGTTGTCACAGAAAATGAAGAGAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000061193.4 ENSMUST00000208607.2 ENSMUST00000209126.2 |
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CDS GCA 72 bp | GACCATGTATTTGATGGTGGACTCCTTGGGAAAGTCTaGCAGAAAAATGAATTCTTCCCTATTGTAGCTTTG | + |
Preference number: 6 (lower is better) Translates to: DHVFDGGLLGKV*QKNEFFPIVAL Trigger: CAAAGCTACAATAGGGAAGAATTCATTTTTCTGGCAGACTTTCCCAAGGAGTCCACCATCAAATACATGGTC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 5 transcripts: ENSMUST00000061193.4 ENSMUST00000207115.2 ENSMUST00000208371.2 ENSMUST00000208607.2 ENSMUST00000209126.2 |
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CDS CAA 72 bp | GTCTGCCAGAAAAATGAATTCTTCCCTATTGTAGCTTaGCAGGATGAAGTTGCCCCAGATGTACAACATGTT | + |
Preference number: 6 (lower is better) Translates to: VCQKNEFFPIVA*QDEVAPDVQHV Trigger: AACATGTTGTACATCTGGGGCAACTTCATCCTGCAAAGCTACAATAGGGAAGAATTCATTTTTCTGGCAGAC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 5 transcripts: ENSMUST00000061193.4 ENSMUST00000207115.2 ENSMUST00000208371.2 ENSMUST00000208607.2 ENSMUST00000209126.2 |
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CDS CAA 72 bp | TTTTCTGTGACAACAGCCATTTGTCCTTTGAAAGAGTaGACCATGTATTTGATGGTGGACTCCTTGGGAAAG | + |
Preference number: 6 (lower is better) Translates to: FSVTTAICPLKE*TMYLMVDSLGK Trigger: CTTTCCCAAGGAGTCCACCATCAAATACATGGTCAACTCTTTCAAAGGACAAATGGCTGTTGTCACAGAAAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000061193.4 ENSMUST00000207115.2 ENSMUST00000208371.2 ENSMUST00000208607.2 ENSMUST00000209126.2 |
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CDS CAA 90 bp | TCTGTGACAACAGCCATTTGTCCTTTGAAAGAGTTGACCATGTATTaGATGGTGGACTCCTTGGGAAAGTCTGCCAGAAAAATGAATTCT | + |
Preference number: 6 (lower is better) Translates to: SVTTAICPLKELTMY*MVDSLGKSARKMNS Trigger: AGAATTCATTTTTCTGGCAGACTTTCCCAAGGAGTCCACCATCAAATACATGGTCAACTCTTTCAAAGGACAAATGGCTGTTGTCACAGA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 5 transcripts: ENSMUST00000061193.4 ENSMUST00000207115.2 ENSMUST00000208371.2 ENSMUST00000208607.2 ENSMUST00000209126.2 |
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CDS CAA 90 bp | AAGTACCAGATCTCTTCATTTTCTGTGACAACAGCCATTTGTCCTTaGAAAGAGTTGACCATGTATTTGATGGTGGACTCCTTGGGAAAG | + |
Preference number: 6 (lower is better) Translates to: KYQISSFSVTTAICP*KELTMYLMVDSLGK Trigger: CTTTCCCAAGGAGTCCACCATCAAATACATGGTCAACTCTTTCAAAGGACAAATGGCTGTTGTCACAGAAAATGAAGAGATCTGGTACTT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000061193.4 ENSMUST00000208607.2 ENSMUST00000209126.2 |
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CDS CAA 72 bp | GGCTCTCATATCCTATGGCGAATAAGGATTTACCACTaGCATCTCTCTTCAAGAAGCCATTCATATTCACAT | + |
Preference number: 6 (lower is better) Translates to: GSHILWRIRIYH*HLSSRSHSYSH Trigger: ATGTGAATATGAATGGCTTCTTGAAGAGAGATGCAAGTGGTAAATCCTTATTCGCCATAGGATATGAGAGCC 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000061193.4 ENSMUST00000207115.2 ENSMUST00000208607.2 ENSMUST00000209126.2 |
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CDS CCA 72 bp | TCAAGAAGCCATTCATATTCACATAGAACCTTTTCTTaGATACGAAGGGCCCTATACCATTGGTATAGATGT | + |
Preference number: 6 (lower is better) Translates to: SRSHSYSHRTFS*IRRALYHWYRC Trigger: ACATCTATACCAATGGTATAGGGCCCTTCGTATCCAAGAAAAGGTTCTATGTGAATATGAATGGCTTCTTGA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000061193.4 ENSMUST00000207115.2 ENSMUST00000208607.2 ENSMUST00000209126.2 |
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CDS CAA 72 bp | GTACCAGATCTCTTCATTTTCTGTGACAACAGCCATTaGTCCTTTGAAAGAGTTGACCATGTATTTGATGGT | + |
Preference number: 6 (lower is better) Translates to: VPDLFIFCDNSH*SFERVDHVFDG Trigger: ACCATCAAATACATGGTCAACTCTTTCAAAGGACAAATGGCTGTTGTCACAGAAAATGAAGAGATCTGGTAC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000061193.4 ENSMUST00000208607.2 ENSMUST00000209126.2 |