Pregenerated sensors for CATSPERG1 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000049676Ensembl transcript IDs: ENSMUST00000047846.13, ENSMUST00000069861.4, ENSMUST00000163782.8, ENSMUST00000164653.8, ENSMUST00000169143.8
Found 227 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | GTCATAGCAAGGGGAGTTCTCCAAGCACAGCCACCAACTGTGGACTaGGGTCCCCAAGGGATTACGTGTCCAGCGGGCTGTTGTAACGGA | + |
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Preference number: 1 (lower is better) Translates to: VIARGVLQAQPPTVD*GPQGITCPAGCCNG Trigger: TCCGTTACAACAGCCCGCTGGACACGTAATCCCTTGGGGACCCCAGTCCACAGTTGGTGGCTGTGCTTGGAGAACTCCCCTTGCTATGAC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000163782.8 |
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| 3UTR TCA 90 bp | GGAGGTGGCAGGCTGCATTCCCATGAGGAGAGGCCTAAGGGTTCATaGGGAAGAGTACAGACCAGGGACTCAGGCCACCTTTGCTCTCTT | + |
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Preference number: 1 (lower is better) Translates to: GGGRLHSHEERPKGS*GRVQTRDSGHLCSL Trigger: AAGAGAGCAAAGGTGGCCTGAGTCCCTGGTCTGTACTCTTCCTCATGAACCCTTAGGCCTCTCCTCATGGGAATGCAGCCTGCCACCTCC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000163782.8 |
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| 3UTR TCA 90 bp | CCAGCGGGCTGTTGTAACGGAAGATTTCTTCCTCCGTGTAGTCTCTaGTGGTGTTCAGTGTGCGACCACCACCCACCACCTTCAGCACGT | + |
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Preference number: 1 (lower is better) Translates to: PAGCCNGRFLPPCSL*WCSVCDHHPPPSAR Trigger: ACGTGCTGAAGGTGGTGGGTGGTGGTCGCACACTGAACACCATCAGAGACTACACGGAGGAAGAAATCTTCCGTTACAACAGCCCGCTGG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000163782.8 |
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| 3UTR TCA 90 bp | GTCCTCTTTGGTACCTGGTCTGGAGGGACCCTCAAAACTTCCCTCTaGGCTGTGAGAATGGAGGGTGAAGCCCCCAGAAGAGGAGGAAGA | + |
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Preference number: 1 (lower is better) Translates to: VLFGTWSGGTLKTSL*AVRMEGEAPRRGGR Trigger: TCTTCCTCCTCTTCTGGGGGCTTCACCCTCCATTCTCACAGCTCAGAGGGAAGTTTTGAGGGTCCCTCCAGACCAGGTACCAAAGAGGAC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000163782.8 |
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| 3UTR GCA 90 bp | TGCGACCACCACCCACCACCTTCAGCACGTAACTGCCCAAGAAACTaGCAGAGTCGCCAGTCACCAAGTCTTGGACTAAGAAGAAGGGCT | + |
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Preference number: 1 (lower is better) Translates to: CDHHPPPSARNCPRN*QSRQSPSLGLRRRA Trigger: AGCCCTTCTTCTTAGTCCAAGACTTGGTGACTGGCGACTCTGGCAGTTTCTTGGGCAGTTACGTGCTGAAGGTGGTGGGTGGTGGTCGCA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000163782.8 |
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| 3UTR GCA 90 bp | TGGTGTTCAGTGTGCGACCACCACCCACCACCTTCAGCACGTAACTaGCCAAGAAACTGCCAGAGTCGCCAGTCACCAAGTCTTGGACTA | + |
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Preference number: 1 (lower is better) Translates to: WCSVCDHHPPPSARN*PRNCQSRQSPSLGL Trigger: TAGTCCAAGACTTGGTGACTGGCGACTCTGGCAGTTTCTTGGGCAGTTACGTGCTGAAGGTGGTGGGTGGTGGTCGCACACTGAACACCA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000163782.8 |
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| 3UTR CCA 90 bp | GTCCTTTGTTTTGTGTTGCCACCAGCGCCAGGTGGGATCGTGCACTaGGTCTGCATAGGGCTTATCATACTTGGAGTGCAGCCACAGCAG | + |
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Preference number: 1 (lower is better) Translates to: VLCFVLPPAPGGIVH*VCIGLIILGVQPQQ Trigger: CTGCTGTGGCTGCACTCCAAGTATGATAAGCCCTATGCAGACCCAGTGCACGATCCCACCTGGCGCTGGTGGCAACACAAAACAAAGGAC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000164653.8 |
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| 3UTR TCA 90 bp | AATGAAGAGTGTGCTCTCGGTGGCAATGGCGTCATGGATGGTGGCTaGGAAGCCAAGAATGGGACAGTAGAAGGAGCCGACCCAGCAACT | + |
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Preference number: 1 (lower is better) Translates to: NEECALGGNGVMDGG*EAKNGTVEGADPAT Trigger: AGTTGCTGGGTCGGCTCCTTCTACTGTCCCATTCTTGGCTTCTCAGCCACCATCCATGACGCCATTGCCACCGAGAGCACACTCTTCATT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000163782.8 |
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| 3UTR GCA 90 bp | CATGAGCATTCTAGCCAACCAGAAAGTCCTGGGGAGGTGGCAGGCTaGATTCCCATGAGGAGAGGCCTAAGGGTTCATGAGGAAGAGTAC | + |
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Preference number: 1 (lower is better) Translates to: HEHSSQPESPGEVAG*IPMRRGLRVHEEEY Trigger: GTACTCTTCCTCATGAACCCTTAGGCCTCTCCTCATGGGAATGCAGCCTGCCACCTCCCCAGGACTTTCTGGTTGGCTAGAATGCTCATG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000047846.13 ENSMUST00000169143.8 |
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| 3UTR CCA 90 bp | TCTCGGTGGCAATGGCGTCATGGATGGTGGCTGAGAAGCCAAGAATaGGACAGTAGAAGGAGCCGACCCAGCAACTGTCAATACTCAGCT | + |
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Preference number: 1 (lower is better) Translates to: SRWQWRHGWWLRSQE*DSRRSRPSNCQYSA Trigger: AGCTGAGTATTGACAGTTGCTGGGTCGGCTCCTTCTACTGTCCCATTCTTGGCTTCTCAGCCACCATCCATGACGCCATTGCCACCGAGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000163782.8 |
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| 3UTR CCA 90 bp | GCCAGGTGGGATCGTGCACTGGGTCTGCATAGGGCTTATCATACTTaGAGTGCAGCCACAGCAGGTAATAGACGAGGCCTTGATAGACAG | + |
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Preference number: 1 (lower is better) Translates to: ARWDRALGLHRAYHT*SAATAGNRRGLDRQ Trigger: CTGTCTATCAAGGCCTCGTCTATTACCTGCTGTGGCTGCACTCCAAGTATGATAAGCCCTATGCAGACCCAGTGCACGATCCCACCTGGC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000164653.8 |
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| 3UTR CCA 90 bp | GTCCACCTACCTTGTCCTTTGTTTTGTGTTGCCACCAGCGCCAGGTaGGATCGTGCACTGGGTCTGCATAGGGCTTATCATACTTGGAGT | + |
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Preference number: 1 (lower is better) Translates to: VHLPCPLFCVATSAR*DRALGLHRAYHTWS Trigger: ACTCCAAGTATGATAAGCCCTATGCAGACCCAGTGCACGATCCCACCTGGCGCTGGTGGCAACACAAAACAAAGGACAAGGTAGGTGGAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000164653.8 |
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| 3UTR CCA 90 bp | AGGAGAAGAGTGCTCACCTGGTCTCTTCCTGATCACTGTCCACCCTaGAAATCACCCTTGCCCTTTGGTCCTACCTTCCGGTATAAACTC | + |
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Preference number: 1 (lower is better) Translates to: RRRVLTWSLPDHCPP*KSPLPFGPTFRYKL Trigger: GAGTTTATACCGGAAGGTAGGACCAAAGGGCAAGGGTGATTTCCAGGGTGGACAGTGATCAGGAAGAGACCAGGTGAGCACTCTTCTCCT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000069861.4 |
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| 3UTR CCA 90 bp | GTCCTTTGTTTTGTGTTGCCACCAGCGCCAGGTGGGATCGTGCACTaGGTCTGCATAGGGCTCTTCATTTTCTGTGACAACAGCCATTTG | + |
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Preference number: 1 (lower is better) Translates to: VLCFVLPPAPGGIVH*VCIGLFIFCDNSHL Trigger: CAAATGGCTGTTGTCACAGAAAATGAAGAGCCCTATGCAGACCCAGTGCACGATCCCACCTGGCGCTGGTGGCAACACAAAACAAAGGAC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000163782.8 |
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| 3UTR TCA 90 bp | GAAGAGTACAGACCAGGGACTCAGGCCACCTTTGCTCTCTTAGCTTaGACATTGTCCTCTTTGGTACCTGGTCTGGAGGGACCCTCAAAA | + |
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Preference number: 1 (lower is better) Translates to: EEYRPGTQATFALLA*TLSSLVPGLEGPSK Trigger: TTTTGAGGGTCCCTCCAGACCAGGTACCAAAGAGGACAATGTTCAAGCTAAGAGAGCAAAGGTGGCCTGAGTCCCTGGTCTGTACTCTTC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000163782.8 |
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| 3UTR GCA 90 bp | TGTTTTGTGTTGCCACCAGCGCCAGGTGGGATCGTGCACTGGGTCTaGATAGGGCTCTTCATTTTCTGTGACAACAGCCATTTGTCCTTT | + |
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Preference number: 1 (lower is better) Translates to: CFVLPPAPGGIVHWV*IGLFIFCDNSHLSF Trigger: AAAGGACAAATGGCTGTTGTCACAGAAAATGAAGAGCCCTATGCAGACCCAGTGCACGATCCCACCTGGCGCTGGTGGCAACACAAAACA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000163782.8 |
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| 3UTR CCA 90 bp | CTGCCAGAGTCGCCAGTCACCAAGTCTTGGACTAAGAAGAAGGGCTaGAATAAGTCACGAAAGAGGAAGCATGGCATCTCGGCGTCTTTA | + |
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Preference number: 1 (lower is better) Translates to: LPESPVTKSWTKKKG*NKSRKRKHGISASL Trigger: TAAAGACGCCGAGATGCCATGCTTCCTCTTTCGTGACTTATTCCAGCCCTTCTTCTTAGTCCAAGACTTGGTGACTGGCGACTCTGGCAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000163782.8 |
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| 3UTR TCA 90 bp | AAGGAACATAAAACTGAATCTCCTTGTGGACTACAGGGCCCTCCCTaGTGTAGTTCTGTTCGGTCTGCAGGCTTCCACCTTGTCCTCTTC | + |
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Preference number: 1 (lower is better) Translates to: KEHKTESPCGLQGPP*CSSVRSAGFHLVLF Trigger: GAAGAGGACAAGGTGGAAGCCTGCAGACCGAACAGAACTACATCAGGGAGGGCCCTGTAGTCCACAAGGAGATTCAGTTTTATGTTCCTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000069861.4 |
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| 3UTR GCA 90 bp | CATCTGTATGCCTGGGTCCCTGGGGAGATGGCTTACACCTACCTTTaGAGGATGAAGTTGCCCCAGATGTACAACATGTTGTTCAATGTG | + |
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Preference number: 1 (lower is better) Translates to: HLYAWVPGEMAYTYL*RMKLPQMYNMLFNV Trigger: CACATTGAACAACATGTTGTACATCTGGGGCAACTTCATCCTGCAAAGGTAGGTGTAAGCCATCTCCCCAGGGACCCAGGCATACAGATG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000069861.4 |
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| 3UTR CCA 90 bp | TTATATAAACAAATATGTGTGTGTTTCCAGGCGCATCTGTATGCCTaGGTCCCTGGGGAGATGGCTTACACCTACCTTTGCAGGATGAAG | + |
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Preference number: 1 (lower is better) Translates to: LYKQICVCFQAHLYA*VPGEMAYTYLCRMK Trigger: CTTCATCCTGCAAAGGTAGGTGTAAGCCATCTCCCCAGGGACCCAGGCATACAGATGCGCCTGGAAACACACACATATTTGTTTATATAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000069861.4 |
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| 3UTR GCA 90 bp | TATGTATACTCTATGTCATTATGTATGTGTATGCGTGCATTCACATaGGCATTCTTCAGCAACAGAGGACAGCTTTTGGGAGTCTTCCTC | + |
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Preference number: 1 (lower is better) Translates to: YVYSMSLCMCMRAFT*AFFSNRGQLLGVFL Trigger: GAGGAAGACTCCCAAAAGCTGTCCTCTGTTGCTGAAGAATGCGCATGTGAATGCACGCATACACATACATAATGACATAGAGTATACATA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000069861.4 |
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| 3UTR TCA 90 bp | GTCAATACTCAGCTCCAAGAGAACATAGTCCTGGAAATTAGAATCTaGGAACAGGATGGCCTTTTCATCATAAAAGCCTCCAAGGATGAA | + |
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Preference number: 1 (lower is better) Translates to: VNTQLQENIVLEIRI*EQDGLFIIKASKDE Trigger: TTCATCCTTGGAGGCTTTTATGATGAAAAGGCCATCCTGTTCTCAGATTCTAATTTCCAGGACTATGTTCTCTTGGAGCTGAGTATTGAC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000163782.8 |
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| 3UTR CAA 90 bp | CCGCCAACTCCCAACATGTCCACCTACCTTGTCCTTTGTTTTGTGTaGCCACCAGCGCCAGGTGGGATCGTGCACTGGGTCTGCATAGGG | + |
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Preference number: 2 (lower is better) Translates to: PPTPNMSTYLVLCFV*PPAPGGIVHWVCIG Trigger: CCCTATGCAGACCCAGTGCACGATCCCACCTGGCGCTGGTGGCAACACAAAACAAAGGACAAGGTAGGTGGACATGTTGGGAGTTGGCGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000164653.8 |
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| 3UTR CAA 90 bp | GTCCTCCGCCAACTCCCAACATGTCCACCTACCTTGTCCTTTGTTTaGTGTTGCCACCAGCGCCAGGTGGGATCGTGCACTGGGTCTGCA | + |
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Preference number: 2 (lower is better) Translates to: VLRQLPTCPPTLSFV*CCHQRQVGSCTGSA Trigger: TGCAGACCCAGTGCACGATCCCACCTGGCGCTGGTGGCAACACAAAACAAAGGACAAGGTAGGTGGACATGTTGGGAGTTGGCGGAGGAC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000164653.8 |
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| 3UTR CAA 90 bp | GTGCTGTCCTCCGCCAACTCCCAACATGTCCACCTACCTTGTCCTTaGTTTTGTGTTGCCACCAGCGCCAGGTGGGATCGTGCACTGGGT | + |
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Preference number: 2 (lower is better) Translates to: VLSSANSQHVHLPCP*FCVATSARWDRALG Trigger: ACCCAGTGCACGATCCCACCTGGCGCTGGTGGCAACACAAAACAAAGGACAAGGTAGGTGGACATGTTGGGAGTTGGCGGAGGACAGCAC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000164653.8 |
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| 3UTR CAA 90 bp | AGGGCCCTCCCTGATGTAGTTCTGTTCGGTCTGCAGGCTTCCACCTaGTCCTCTTCTCTCTGTCCTAGACACACTGGCTTCACCAGCCCA | + |
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Preference number: 2 (lower is better) Translates to: RALPDVVLFGLQAST*SSSLCPRHTGFTSP Trigger: TGGGCTGGTGAAGCCAGTGTGTCTAGGACAGAGAGAAGAGGACAAGGTGGAAGCCTGCAGACCGAACAGAACTACATCAGGGAGGGCCCT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000069861.4 |
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| 3UTR CAA 90 bp | TACCTCAGTGCTGTCCTCCGCCAACTCCCAACATGTCCACCTACCTaGTCCTTTGTTTTGTGTTGCCACCAGCGCCAGGTGGGATCGTGC | + |
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Preference number: 2 (lower is better) Translates to: YLSAVLRQLPTCPPT*SFVLCCHQRQVGSC Trigger: GCACGATCCCACCTGGCGCTGGTGGCAACACAAAACAAAGGACAAGGTAGGTGGACATGTTGGGAGTTGGCGGAGGACAGCACTGAGGTA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000164653.8 |
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| 3UTR-3UTR TCA 90 bp | CAGGGGAGAGGAGAAGAGTGCTCACCTGGTCTCTTCCTGATCACTGTCCACCCTCTGCATGTTCCCTCCTaGCCTCCAGGCAACCTGATT | + |
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Preference number: 2 (lower is better) Translates to: QGRGEECSPGLFLITVHPLHVPS*PPGNLI Trigger: AATCAGGTTGCCTGGAGGTCAGGAGGGAACATGCAG...AGGGTGGACAGTGATCAGGAAGAGACCAGGTGAGCACTCTTCTCCTCTCCCCTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000069861.4 |
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| 3UTR-3UTR CCA 90 bp | ACCACCCACCACCTTCAGCACGTAACTGCCCAAGAAACTGCCAGAGTCGCCAGTGTGGCAATGGCGTCATaGATGGTGGCTGAGAAGCCA | + |
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Preference number: 2 (lower is better) Translates to: TTHHLQHVTAQETARVASVAMAS*MVAEKP Trigger: TGGCTTCTCAGCCACCATCCATGACGCCATTGCCAC...ACTGGCGACTCTGGCAGTTTCTTGGGCAGTTACGTGCTGAAGGTGGTGGGTGGT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000163782.8 |
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| 3UTR-3UTR CCA 90 bp | ACTGAAAGGCACTCAGGATCCGCCAGTACCAGAGACAATGACAGCTTCTTGTCCCCTGGATGCACAGGATaGTCAGCTAGTGGGCGCCTG | + |
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Preference number: 2 (lower is better) Translates to: TERHSGSASTRDNDSFLSPGCTG*SASGRL Trigger: CAGGCGCCCACTAGCTGACCATCCTGTGCATCCAGG...GGACAAGAAGCTGTCATTGTCTCTGGTACTGGCGGATCCTGAGTGCCTTTCAGT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000164653.8 |
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| 3UTR-3UTR CCA 90 bp | ACCACCCACCACCTTCAGCACGTAACTGCCCAAGAAACTGCCAGAGTCGCCAGTCTGAGAAGCCAAGAATaGGACAGTAGAAGGAGCCGA | + |
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Preference number: 2 (lower is better) Translates to: TTHHLQHVTAQETARVASLRSQE*DSRRSR Trigger: TCGGCTCCTTCTACTGTCCCATTCTTGGCTTCTCAG...ACTGGCGACTCTGGCAGTTTCTTGGGCAGTTACGTGCTGAAGGTGGTGGGTGGT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000163782.8 |
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| 3UTR-3UTR CCA 90 bp | CCTTTGTTTTGTGTTGCCACCAGCGCCAGGTGGGATCGTGCACTGGGTCTGCATCAATGGCGTCATGGATaGTGGCTGAGAAGCCAAGAA | + |
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Preference number: 2 (lower is better) Translates to: PLFCVATSARWDRALGLHQWRHG*WLRSQE Trigger: TTCTTGGCTTCTCAGCCACCATCCATGACGCCATTG...ATGCAGACCCAGTGCACGATCCCACCTGGCGCTGGTGGCAACACAAAACAAAGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000163782.8 |
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| 3UTR CAA 90 bp | ACGTACTCAGAACCATTGCCACTGAAATACACCGGGCACAGTCTCTaGATGCACTCGCTAGGCAGGACACGAACCCATCTGCTACTGCCA | + |
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Preference number: 2 (lower is better) Translates to: TYSEPLPLKYTGHSL*MHSLGRTRTHLLLP Trigger: TGGCAGTAGCAGATGGGTTCGTGTCCTGCCTAGCGAGTGCATCAAGAGACTGTGCCCGGTGTATTTCAGTGGCAATGGTTCTGAGTACGT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000163782.8 |
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| 3UTR-3UTR GCA 90 bp | TTGTCCTCTTTGGTACCTGGTCTGGAGGGACCCTCAAAACTTCCCTCTGAGCTGCCTGGAAATCACCCTTaGCCTTTGGTCCTACCTTCC | + |
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Preference number: 2 (lower is better) Translates to: LSSLVPGLEGPSKLPSELPGNHP*PLVLPS Trigger: GGAAGGTAGGACCAAAGGGCAAGGGTGATTTCCAGG...CAGCTCAGAGGGAAGTTTTGAGGGTCCCTCCAGACCAGGTACCAAAGAGGACAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000163782.8 |
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| 3UTR-3UTR GCA 90 bp | TTGTCCTCTTTGGTACCTGGTCTGGAGGGACCCTCAAAACTTCCCTCTGAGCTGTCCTTTGTTTTGTGTTaGCACCAGCGCCAGGTGGGA | + |
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Preference number: 2 (lower is better) Translates to: LSSLVPGLEGPSKLPSELSFVLC*HQRQVG Trigger: TCCCACCTGGCGCTGGTGGCAACACAAAACAAAGGA...CAGCTCAGAGGGAAGTTTTGAGGGTCCCTCCAGACCAGGTACCAAAGAGGACAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000163782.8 |
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| 3UTR-3UTR CCA 90 bp | GGCCTTCACTATGTGAGGCCACACGAGGCAGAACAGGATGTAGAAGACAACCAGTGGCGTCATGGATGGTaGCTGAGAAGCCAAGAATGG | + |
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Preference number: 2 (lower is better) Translates to: GLHYVRPHEAEQDVEDNQWRHGW*LRSQEW Trigger: CCATTCTTGGCTTCTCAGCCACCATCCATGACGCCA...CTGGTTGTCTTCTACATCCTGTTCTGCCTCGTGTGGCCTCACATAGTGAAGGCC 53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000163782.8 |
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| 3UTR-3UTR CCA 90 bp | GAAGATTTCTTCCTCCGTGTAGTCTCTGATGGTGTTCAGTGTGCGACCACCACCAGAGTGTGCTCTCGGTaGCAATGGCGTCATGGATGG | + |
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Preference number: 2 (lower is better) Translates to: EDFFLRVVSDGVQCATTTRVCSR*QWRHGW Trigger: CCATCCATGACGCCATTGCCACCGAGAGCACACTCT...GGTGGTGGTCGCACACTGAACACCATCAGAGACTACACGGAGGAAGAAATCTTC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000163782.8 |
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| 3UTR CAA 90 bp | GGAAGAGTACAGACCAGGGACTCAGGCCACCTTTGCTCTCTTAGCTaGAACATTGTCCTCTTTGGTACCTGGTCTGGAGGGACCCTCAAA | + |
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Preference number: 2 (lower is better) Translates to: GRVQTRDSGHLCSLS*NIVLFGTWSGGTLK Trigger: TTTGAGGGTCCCTCCAGACCAGGTACCAAAGAGGACAATGTTCAAGCTAAGAGAGCAAAGGTGGCCTGAGTCCCTGGTCTGTACTCTTCC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000163782.8 |
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| 3UTR-3UTR CCA 90 bp | CTGTCAACTGAGCAAGGTGACTATTTAATCCCAGCACTCGGAACTGGGGCATGTCTACAAGGGGAGTTCTaGGCGAGCAAGGGCTACACA | + |
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Preference number: 2 (lower is better) Translates to: LSTEQGDYLIPALGTGACLQGEF*ASKGYT Trigger: TGTGTAGCCCTTGCTCGCCCAGAACTCCCCTTGTAG...ACATGCCCCAGTTCCGAGTGCTGGGATTAAATAGTCACCTTGCTCAGTTGACAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000069861.4 |
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| 3UTR-3UTR CCA 90 bp | GGCCTTCACTATGTGAGGCCACACGAGGCAGAACAGGATGTAGAAGACAACCAGGATCACTGTCCACCCTaGAAATCACCCTTGCCCTTT | + |
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Preference number: 2 (lower is better) Translates to: GLHYVRPHEAEQDVEDNQDHCPP*KSPLPF Trigger: AAAGGGCAAGGGTGATTTCCAGGGTGGACAGTGATC...CTGGTTGTCTTCTACATCCTGTTCTGCCTCGTGTGGCCTCACATAGTGAAGGCC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000163782.8 |
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| 3UTR-3UTR CCA 90 bp | ACTGAAAGGCACTCAGGATCCGCCAGTACCAGAGACAATGACAGCTTCTTGTCCATGAACACGGGGGCATaGTTCACAGTGTACCACAGG | + |
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Preference number: 2 (lower is better) Translates to: TERHSGSASTRDNDSFLSMNTGA*FTVYHR Trigger: CCTGTGGTACACTGTGAACCATGCCCCCGTGTTCAT...GGACAAGAAGCTGTCATTGTCTCTGGTACTGGCGGATCCTGAGTGCCTTTCAGT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000163782.8 |
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| 3UTR CAA 90 bp | GTTGCTGAACAGGTAAAAGAAGTAATCCTTGTCCTTTGTTTTGTGTaGCCACCAGCGCCAGGTGGGATCGTGCACTGGGTCTGCATAGGG | + |
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Preference number: 2 (lower is better) Translates to: VAEQVKEVILVLCFV*PPAPGGIVHWVCIG Trigger: CCCTATGCAGACCCAGTGCACGATCCCACCTGGCGCTGGTGGCAACACAAAACAAAGGACAAGGATTACTTCTTTTACCTGTTCAGCAAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000163782.8 |
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| 3UTR-3UTR TCA 90 bp | CCTTTGTTTTGTGTTGCCACCAGCGCCAGGTGGGATCGTGCACTGGGTCTGCATCTGGAAATTAGAATCTaGGAACAGGATGGCCTTTTC | + |
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Preference number: 2 (lower is better) Translates to: PLFCVATSARWDRALGLHLEIRI*EQDGLF Trigger: GAAAAGGCCATCCTGTTCTCAGATTCTAATTTCCAG...ATGCAGACCCAGTGCACGATCCCACCTGGCGCTGGTGGCAACACAAAACAAAGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000163782.8 |
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| 3UTR-3UTR TCA 90 bp | CCAAGCACAGCCACCAACTGTGGACTGGGGTCCCCAAGGGATTACGTGTCCAGCGGATATTCAGAGTCTTaGACTCTGGTAATTTTTCAC | + |
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Preference number: 2 (lower is better) Translates to: PSTATNCGLGSPRDYVSSGYSES*TLVIFH Trigger: GTGAAAAATTACCAGAGTTCAAGACTCTGAATATCC...GCTGGACACGTAATCCCTTGGGGACCCCAGTCCACAGTTGGTGGCTGTGCTTGG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000163782.8 |
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| 3UTR CAA 90 bp | GCATCTGTATGCCTGGGTCCCTGGGGAGATGGCTTACACCTACCTTaGCAGGATGAAGTTGCCCCAGATGTACAACATGTTGTTCAATGT | + |
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Preference number: 2 (lower is better) Translates to: ASVCLGPWGDGLHLP*QDEVAPDVQHVVQC Trigger: ACATTGAACAACATGTTGTACATCTGGGGCAACTTCATCCTGCAAAGGTAGGTGTAAGCCATCTCCCCAGGGACCCAGGCATACAGATGC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000069861.4 |
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| 3UTR-3UTR GCA 90 bp | TATGCCTGGGTCCCTGGGGAGATGGCTTACACCTACCTTTGCAGGATGAAGTTGATGCGTGCATTCACATaGGCATTCTTCAGCAACAGA | + |
|
Preference number: 2 (lower is better) Translates to: YAWVPGEMAYTYLCRMKLMRAFT*AFFSNR Trigger: TCTGTTGCTGAAGAATGCGCATGTGAATGCACGCAT...CAACTTCATCCTGCAAAGGTAGGTGTAAGCCATCTCCCCAGGGACCCAGGCATA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000069861.4 |
||
| 3UTR-3UTR GCA 90 bp | GGCCTTCACTATGTGAGGCCACACGAGGCAGAACAGGATGTAGAAGACAACCAGGAACCCATCTGCTACTaGCATGGCTTTTGTCAAAGA | + |
|
Preference number: 2 (lower is better) Translates to: GLHYVRPHEAEQDVEDNQEPICY*HGFCQR Trigger: TCTTTGACAAAAGCCATGGCAGTAGCAGATGGGTTC...CTGGTTGTCTTCTACATCCTGTTCTGCCTCGTGTGGCCTCACATAGTGAAGGCC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000163782.8 |
||
| 3UTR-3UTR CCA 90 bp | TATGCCTGGGTCCCTGGGGAGATGGCTTACACCTACCTTTGCAGGATGAAGTTGTGTGTATACACACACTaGATGTCCACTTGGGGATTC | + |
|
Preference number: 2 (lower is better) Translates to: YAWVPGEMAYTYLCRMKLCVYTH*MSTWGF Trigger: GAATCCCCAAGTGGACATCCAGTGTGTGTATACACA...CAACTTCATCCTGCAAAGGTAGGTGTAAGCCATCTCCCCAGGGACCCAGGCATA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000069861.4 |
||
| 3UTR-3UTR CCA 90 bp | AAAGGCACTCAGGATCCGCCAGTACCAGAGACAATGACAGCTTCTTGTCCACATTTCAGAGACCAGAGGTaGCAGAGCAACATAGCTCTC | + |
|
Preference number: 2 (lower is better) Translates to: KGTQDPPVPETMTASCPHFRDQR*QSNIAL Trigger: GAGAGCTATGTTGCTCTGCCACCTCTGGTCTCTGAA...ATGTGGACAAGAAGCTGTCATTGTCTCTGGTACTGGCGGATCCTGAGTGCCTTT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000164653.8 |
||
| 3UTR-3UTR TCA 90 bp | GGAGAAGAGTGCTCACCTGGTCTCTTCCTGATCACTGTCCACCCTGGAAATCACACTGAGCCACCTTGCTaGCATAGAATATCAAAATGC | + |
|
Preference number: 2 (lower is better) Translates to: GEECSPGLFLITVHPGNHTEPPC*HRISKC Trigger: GCATTTTGATATTCTATGTCAGCAAGGTGGCTCAGT...GTGATTTCCAGGGTGGACAGTGATCAGGAAGAGACCAGGTGAGCACTCTTCTCC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000069861.4 |
||
| 3UTR-3UTR GCA 90 bp | ACCACAGTGAAGGTGAACCAGTTGCCCTTGTCTAGGAAGAAAAGATCGGGTATTATTAATAGTGGGTCCTaGAGGGTTTGGGTGTGGGGC | + |
|
Preference number: 2 (lower is better) Translates to: TTVKVNQLPLSRKKRSGIINSGS*RVWVWG Trigger: GCCCCACACCCAAACCCTGCAGGACCCACTATTAAT...AATACCCGATCTTTTCTTCCTAGACAAGGGCAACTGGTTCACCTTCACTGTGGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000164653.8 |
||
| 3UTR-3UTR CCA 90 bp | TCTATGACTTTAATCTTGGTGAGCAGAGTGTTGCGATTAAGAAGGAACTCCCGACCAACCAGAAAGTCCTaGGGAGGTGGCAGGCTGCAT | + |
|
Preference number: 2 (lower is better) Translates to: SMTLILVSRVLRLRRNSRPTRKS*GGGRLH Trigger: ATGCAGCCTGCCACCTCCCCAGGACTTTCTGGTTGG...TCGGGAGTTCCTTCTTAATCGCAACACTCTGCTCACCAAGATTAAAGTCATAGA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000163782.8 |
||
| 3UTR-3UTR CCA 90 bp | ATAAACAAATATGTGTGTGTTTCCAGGCGCATCTGTATGCCTGGGTCCCTGGGGAGAAGAGTGCTCACCTaGTCTCTTCCTGATCACTGT | + |
|
Preference number: 2 (lower is better) Translates to: INKYVCVSRRICMPGSLGRRVLT*SLPDHC Trigger: ACAGTGATCAGGAAGAGACCAGGTGAGCACTCTTCT...CCCCAGGGACCCAGGCATACAGATGCGCCTGGAAACACACACATATTTGTTTAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000069861.4 |
||
| 3UTR CAA 90 bp | TGGGTCCCTGGGGAGATGGCTTACACCTACCTTTGCAGGATGAAGTaGCCCCAGATGTACAACATGTTGTTCAATGTGTTGAAGAACAAG | + |
|
Preference number: 2 (lower is better) Translates to: WVPGEMAYTYLCRMK*PQMYNMLFNVLKNK Trigger: CTTGTTCTTCAACACATTGAACAACATGTTGTACATCTGGGGCAACTTCATCCTGCAAAGGTAGGTGTAAGCCATCTCCCCAGGGACCCA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000069861.4 |
||
| 3UTR CAA 90 bp | CTTATCATACTTGGAGTGCAGCCACAGCAGGTAATAGACGAGGCCTaGATAGACAGCGAGTGTGTTATTGTTGTGGAAGCCCAAGGATTC | + |
|
Preference number: 2 (lower is better) Translates to: LIILGVQPQQVIDEA*IDSECVIVVEAQGF Trigger: GAATCCTTGGGCTTCCACAACAATAACACACTCGCTGTCTATCAAGGCCTCGTCTATTACCTGCTGTGGCTGCACTCCAAGTATGATAAG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000164653.8 |
||
| 3UTR-3UTR TCA 90 bp | GCTTTGCAGGATGAAGTTGCCCCAGATGTACAACATGTTGTTCAATGTGTTGAAGCTGGTTCTGTCGAATaGAGAGTGTGCTCTCGGTGG | + |
|
Preference number: 2 (lower is better) Translates to: ALQDEVAPDVQHVVQCVEAGSVE*RVCSRW Trigger: CCACCGAGAGCACACTCTTCATTCGACAGAACCAGC...TTCAACACATTGAACAACATGTTGTACATCTGGGGCAACTTCATCCTGCAAAGC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000163782.8 |
||
| 3UTR-3UTR GCA 90 bp | ACCTACCTTTGCAGGATGAAGTTGCCCCAGATGTACAACATGTTGTTCAATGTGCCTGGAAATCACCCTTaGCCTTTGGTCCTACCTTCC | + |
|
Preference number: 2 (lower is better) Translates to: TYLCRMKLPQMYNMLFNVPGNHP*PLVLPS Trigger: GGAAGGTAGGACCAAAGGGCAAGGGTGATTTCCAGG...CACATTGAACAACATGTTGTACATCTGGGGCAACTTCATCCTGCAAAGGTAGGT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000069861.4 |
||
| 3UTR-3UTR CCA 90 bp | AAAGGCACTCAGGATCCGCCAGTACCAGAGACAATGACAGCTTCTTGTCCACATGTTGGTGTATGTCACTaGTCTCTTCCTGATCACTGT | + |
|
Preference number: 2 (lower is better) Translates to: KGTQDPPVPETMTASCPHVGVCH*SLPDHC Trigger: ACAGTGATCAGGAAGAGACCAGTGACATACACCAAC...ATGTGGACAAGAAGCTGTCATTGTCTCTGGTACTGGCGGATCCTGAGTGCCTTT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000163782.8 |
||
| 3UTR-3UTR CCA 90 bp | TCTCTTTTTATCTATGACTTTAATCTTGGTGAGCAGAGTGTTGCGATTAAGAAGGCCACCAGCGCCAGGTaGGATCGTGCACTGGGTCTG | + |
|
Preference number: 2 (lower is better) Translates to: SLFIYDFNLGEQSVAIKKATSAR*DRALGL Trigger: CAGACCCAGTGCACGATCCCACCTGGCGCTGGTGGC...CTTCTTAATCGCAACACTCTGCTCACCAAGATTAAAGTCATAGATAAAAAGAGA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000163782.8 ENSMUST00000164653.8 |
||
| 3UTR CAA 90 bp | GGCTCTTCATTTTCTGTGACAACAGCCATTTGTCCTTTGAAAGAGTaGACCATGTATTTGATGGTGGACTCCTTGGGGAAGTCCGCCAGA | + |
|
Preference number: 2 (lower is better) Translates to: GSSFSVTTAICPLKE*TMYLMVDSLGKSAR Trigger: TCTGGCGGACTTCCCCAAGGAGTCCACCATCAAATACATGGTCAACTCTTTCAAAGGACAAATGGCTGTTGTCACAGAAAATGAAGAGCC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000163782.8 |
||
| 3UTR-3UTR TCA 90 bp | ACCTACCTTTGCAGGATGAAGTTGCCCCAGATGTACAACATGTTGTTCAATGTGCAGCACCCAGAAACCTaGAGAACTCTCTTGAAACCC | + |
|
Preference number: 2 (lower is better) Translates to: TYLCRMKLPQMYNMLFNVQHPET*RTLLKP Trigger: GGGTTTCAAGAGAGTTCTTCAGGTTTCTGGGTGCTG...CACATTGAACAACATGTTGTACATCTGGGGCAACTTCATCCTGCAAAGGTAGGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000069861.4 |
||
| 3UTR-3UTR GCA 90 bp | GGAGCATCTCTTTTTATCTATGACTTTAATCTTGGTGAGCAGAGTGTTGCGATTCAGCTAGTGGGCGCCTaGCAGGAGGAATGTACCTCA | + |
|
Preference number: 2 (lower is better) Translates to: GASLFIYDFNLGEQSVAIQLVGA*QEECTS Trigger: TGAGGTACATTCCTCCTGGCAGGCGCCCACTAGCTG...AATCGCAACACTCTGCTCACCAAGATTAAAGTCATAGATAAAAAGAGATGCTCC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000164653.8 |
||
| 3UTR CAA 90 bp | CAGAGGACAGCTTTTGGGAGTCTTCCTCTTTCTACCATTCGGGTCTaGAGAATTGAGCTTAGGTTATCACTTTTGGTGGCAAGTGTCTGT | + |
|
Preference number: 2 (lower is better) Translates to: QRTAFGSLPLSTIRV*RIELRLSLLVASVC Trigger: ACAGACACTTGCCACCAAAAGTGATAACCTAAGCTCAATTCTCAAGACCCGAATGGTAGAAAGAGGAAGACTCCCAAAAGCTGTCCTCTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000069861.4 |
||
| 3UTR CAA 90 bp | TGCAGGATGAAGTTGCCCCAGATGTACAACATGTTGTTCAATGTGTaGAAGAACAAGCCCTTGGGTGTCATAGGAGTGTTGGTGTATGTC | + |
|
Preference number: 2 (lower is better) Translates to: CRMKLPQMYNMLFNV*KNKPLGVIGVLVYV Trigger: GACATACACCAACACTCCTATGACACCCAAGGGCTTGTTCTTCAACACATTGAACAACATGTTGTACATCTGGGGCAACTTCATCCTGCA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000069861.4 ENSMUST00000163782.8 |
||
| 3UTR CAA 90 bp | TACACCTACCTTTGCAGGATGAAGTTGCCCCAGATGTACAACATGTaGTTCAATGTGTTGAAGAACAAGCCCTTGGGTGTCATAGGAGTG | + |
|
Preference number: 2 (lower is better) Translates to: YTYLCRMKLPQMYNM*FNVLKNKPLGVIGV Trigger: CACTCCTATGACACCCAAGGGCTTGTTCTTCAACACATTGAACAACATGTTGTACATCTGGGGCAACTTCATCCTGCAAAGGTAGGTGTA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000069861.4 |
||
| 3UTR CAA 90 bp | ACCATGCCCTGTTCGGAGCATCTCTTTTTATCTATGACTTTAATCTaGGTGAGCAGAGTGTTGCGATTAAGAAGGAACTCCCGAGTCGCA | + |
|
Preference number: 2 (lower is better) Translates to: TMPCSEHLFLSMTLI*VSRVLRLRRNSRVA Trigger: TGCGACTCGGGAGTTCCTTCTTAATCGCAACACTCTGCTCACCAAGATTAAAGTCATAGATAAAAAGAGATGCTCCGAACAGGGCATGGT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000163782.8 ENSMUST00000164653.8 |
||
| 3UTR CAA 90 bp | TCTGTGACAACAGCCATTTGTCCTTTGAAAGAGTTGACCATGTATTaGATGGTGGACTCCTTGGGGAAGTCCGCCAGAAAAATGAATTCT | + |
|
Preference number: 2 (lower is better) Translates to: SVTTAICPLKELTMY*MVDSLGKSARKMNS Trigger: AGAATTCATTTTTCTGGCGGACTTCCCCAAGGAGTCCACCATCAAATACATGGTCAACTCTTTCAAAGGACAAATGGCTGTTGTCACAGA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000163782.8 |
||
| 3UTR CAA 90 bp | GAGCATCTCTTTTTATCTATGACTTTAATCTTGGTGAGCAGAGTGTaGCGATTAAGAAGGAACTCCCGAGTCGCAGTTACTGAAAGGCAC | + |
|
Preference number: 2 (lower is better) Translates to: EHLFLSMTLILVSRV*RLRRNSRVAVTERH Trigger: GTGCCTTTCAGTAACTGCGACTCGGGAGTTCCTTCTTAATCGCAACACTCTGCTCACCAAGATTAAAGTCATAGATAAAAAGAGATGCTC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000163782.8 ENSMUST00000164653.8 |
||
| 3UTR-3UTR TCA 90 bp | TCTCTTTTTATCTATGACTTTAATCTTGGTGAGCAGAGTGTTGCGATTAAGAAGTTTGGGTGTGGGGCTTaGTGCCTGATACCTACACCC | + |
|
Preference number: 2 (lower is better) Translates to: SLFIYDFNLGEQSVAIKKFGCGA*CLIPTP Trigger: GGGTGTAGGTATCAGGCATCAAGCCCCACACCCAAA...CTTCTTAATCGCAACACTCTGCTCACCAAGATTAAAGTCATAGATAAAAAGAGA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000164653.8 |
||
| 3UTR-3UTR TCA 90 bp | ACCTACCTTTGCAGGATGAAGTTGCCCCAGATGTACAACATGTTGTTCAATGTGCCTGAAGAACTCTCTTaGAACCCTAATCTCACAATA | + |
|
Preference number: 2 (lower is better) Translates to: TYLCRMKLPQMYNMLFNVPEELS*NPNLTI Trigger: TATTGTGAGATTAGGGTTTCAAGAGAGTTCTTCAGG...CACATTGAACAACATGTTGTACATCTGGGGCAACTTCATCCTGCAAAGGTAGGT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000069861.4 |
||
| 3UTR-3UTR GCA 90 bp | TCTCTTTTTATCTATGACTTTAATCTTGGTGAGCAGAGTGTTGCGATTAAGAAGCAACATAGCTCTCTGTaGGTGATGCATGCTGTTTTT | + |
|
Preference number: 2 (lower is better) Translates to: SLFIYDFNLGEQSVAIKKQHSSL*VMHAVF Trigger: AAAAACAGCATGCATCACGCACAGAGAGCTATGTTG...CTTCTTAATCGCAACACTCTGCTCACCAAGATTAAAGTCATAGATAAAAAGAGA 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000164653.8 |
||
| 3UTR GCA 72 bp | ATCCTGGATGCACAGGATGGTCAGCTAGTGGGCGCCTaGCAGGAGGAATGTACCTCAGTGCTGTCCTCCGCC | + |
|
Preference number: 3 (lower is better) Translates to: ILDAQDGQLVGA*QEECTSVLSSA Trigger: GGCGGAGGACAGCACTGAGGTACATTCCTCCTGGCAGGCGCCCACTAGCTGACCATCCTGTGCATCCAGGAT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000164653.8 |
||
| 3UTR CCA 72 bp | AGGGGAGTTCTCCAAGCACAGCCACCAACTGTGGACTaGGGTCCCCAAGGGATTACGTGTCCAGCGGGCTGT | + |
|
Preference number: 3 (lower is better) Translates to: RGVLQAQPPTVD*GPQGITCPAGC Trigger: ACAGCCCGCTGGACACGTAATCCCTTGGGGACCCCAGTCCACAGTTGGTGGCTGTGCTTGGAGAACTCCCCT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000163782.8 |
||
| 3UTR GCA 72 bp | GTGTGCGACCACCACCCACCACCTTCAGCACGTAACTaGCCAAGAAACTGCCAGAGTCGCCAGTCACCAAGT | + |
|
Preference number: 3 (lower is better) Translates to: VCDHHPPPSARN*PRNCQSRQSPS Trigger: ACTTGGTGACTGGCGACTCTGGCAGTTTCTTGGGCAGTTACGTGCTGAAGGTGGTGGGTGGTGGTCGCACAC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000163782.8 |
||
| 3UTR GCA 72 bp | TTGCCACCAGCGCCAGGTGGGATCGTGCACTGGGTCTaGATAGGGCTTATCATACTTGGAGTGCAGCCACAG | + |
|
Preference number: 3 (lower is better) Translates to: LPPAPGGIVHWV*IGLIILGVQPQ Trigger: CTGTGGCTGCACTCCAAGTATGATAAGCCCTATGCAGACCCAGTGCACGATCCCACCTGGCGCTGGTGGCAA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000164653.8 |
||
| 3UTR TCA 72 bp | TGTGCTCTCGGTGGCAATGGCGTCATGGATGGTGGCTaGGAAGCCAAGAATGGGACAGTAGAAGGAGCCGAC | + |
|
Preference number: 3 (lower is better) Translates to: CALGGNGVMDGG*EAKNGTVEGAD Trigger: GTCGGCTCCTTCTACTGTCCCATTCTTGGCTTCTCAGCCACCATCCATGACGCCATTGCCACCGAGAGCACA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000163782.8 |
||
| 3UTR TCA 72 bp | GGTACCTGGTCTGGAGGGACCCTCAAAACTTCCCTCTaGGCTGTGAGAATGGAGGGTGAAGCCCCCAGAAGA | + |
|
Preference number: 3 (lower is better) Translates to: GTWSGGTLKTSL*AVRMEGEAPRR Trigger: TCTTCTGGGGGCTTCACCCTCCATTCTCACAGCTCAGAGGGAAGTTTTGAGGGTCCCTCCAGACCAGGTACC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000163782.8 |
||
| 3UTR TCA 72 bp | AGGGGAGAGGAGAAGAGTGCTCACCTGGTCTCTTCCTaGTCACTGTCCACCCTGGAAATCACCCTTGCCCTT | + |
|
Preference number: 3 (lower is better) Translates to: RGEEKSAHLVSS*SLSTLEITLAL Trigger: AAGGGCAAGGGTGATTTCCAGGGTGGACAGTGATCAGGAAGAGACCAGGTGAGCACTCTTCTCCTCTCCCCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000069861.4 |
||
| 3UTR GCA 72 bp | CCAACATGTCCACCTACCTTGTCCTTTGTTTTGTGTTaGCACCAGCGCCAGGTGGGATCGTGCACTGGGTCT | + |
|
Preference number: 3 (lower is better) Translates to: PTCPPTLSFVLC*HQRQVGSCTGS Trigger: AGACCCAGTGCACGATCCCACCTGGCGCTGGTGGCAACACAAAACAAAGGACAAGGTAGGTGGACATGTTGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000164653.8 |
||
| 3UTR CCA 72 bp | AGAGTGTGCTCTCGGTGGCAATGGCGTCATGGATGGTaGCTGAGAAGCCAAGAATGGGACAGTAGAAGGAGC | + |
|
Preference number: 3 (lower is better) Translates to: RVCSRWQWRHGW*LRSQEWDSRRS Trigger: GCTCCTTCTACTGTCCCATTCTTGGCTTCTCAGCCACCATCCATGACGCCATTGCCACCGAGAGCACACTCT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000163782.8 |
||
| 3UTR CCA 72 bp | CCTTGTCCTTTGTTTTGTGTTGCCACCAGCGCCAGGTaGGATCGTGCACTGGGTCTGCATAGGGCTCTTCAT | + |
|
Preference number: 3 (lower is better) Translates to: PCPLFCVATSAR*DRALGLHRALH Trigger: ATGAAGAGCCCTATGCAGACCCAGTGCACGATCCCACCTGGCGCTGGTGGCAACACAAAACAAAGGACAAGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000163782.8 |
||
| 3UTR CCA 72 bp | GGCCAAGCGCTTGCCAGGAGGACAGCCGATGAATATTaGTACCAGCCTGATACCTTGAATGTGGTCCCCAAG | + |
|
Preference number: 3 (lower is better) Translates to: GQALARRTADEY*YQPDTLNVVPK Trigger: CTTGGGGACCACATTCAAGGTATCAGGCTGGTACCAATATTCATCGGCTGTCCTCCTGGCAAGCGCTTGGCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000163782.8 ENSMUST00000164653.8 |
||
| 3UTR CCA 72 bp | TTTGTGTTGCCACCAGCGCCAGGTGGGATCGTGCACTaGGTCTGCATAGGGCTTATCATACTTGGAGTGCAG | + |
|
Preference number: 3 (lower is better) Translates to: FVLPPAPGGIVH*VCIGLIILGVQ Trigger: CTGCACTCCAAGTATGATAAGCCCTATGCAGACCCAGTGCACGATCCCACCTGGCGCTGGTGGCAACACAAA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000164653.8 |
||
| 3UTR CCA 72 bp | CCTTGTCCTTTGTTTTGTGTTGCCACCAGCGCCAGGTaGGATCGTGCACTGGGTCTGCATAGGGCTTATCAT | + |
|
Preference number: 3 (lower is better) Translates to: PCPLFCVATSAR*DRALGLHRAYH Trigger: ATGATAAGCCCTATGCAGACCCAGTGCACGATCCCACCTGGCGCTGGTGGCAACACAAAACAAAGGACAAGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000164653.8 |
||
| 3UTR TCA 72 bp | CTCTGGTGCCATCATGTTGTGAATCTTCCAGCGAAATaGGACCCAGGCCTTCACTATGTGAGGCCACACGAG | + |
|
Preference number: 3 (lower is better) Translates to: LWCHHVVNLPAK*DPGLHYVRPHE Trigger: CTCGTGTGGCCTCACATAGTGAAGGCCTGGGTCTCATTTCGCTGGAAGATTCACAACATGATGGCACCAGAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000163782.8 |
||
| 3UTR TCA 72 bp | AGACCAGGGACTCAGGCCACCTTTGCTCTCTTAGCTTaGACATTGTCCTCTTTGGTACCTGGTCTGGAGGGA | + |
|
Preference number: 3 (lower is better) Translates to: RPGTQATFALLA*TLSSLVPGLEG Trigger: TCCCTCCAGACCAGGTACCAAAGAGGACAATGTTCAAGCTAAGAGAGCAAAGGTGGCCTGAGTCCCTGGTCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000163782.8 |
||
| 3UTR CCA 72 bp | CTTCTTGTCCACATTAATAGTGGGTCCTGCAGGGTTTaGGTGTGGGGCTTGATGCCTGATACCTACACCCCA | + |
|
Preference number: 3 (lower is better) Translates to: LLVHINSGSCRV*VWGLMPDTYTP Trigger: TGGGGTGTAGGTATCAGGCATCAAGCCCCACACCCAAACCCTGCAGGACCCACTATTAATGTGGACAAGAAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000164653.8 |
||
| 3UTR TCA 72 bp | AAAACTGAATCTCCTTGTGGACTACAGGGCCCTCCCTaGTGTAGTTCTGTTCGGTCTGCAGGCTTCCACCTT | + |
|
Preference number: 3 (lower is better) Translates to: KTESPCGLQGPP*CSSVRSAGFHL Trigger: AAGGTGGAAGCCTGCAGACCGAACAGAACTACATCAGGGAGGGCCCTGTAGTCCACAAGGAGATTCAGTTTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000069861.4 |
||
| 3UTR TCA 72 bp | CATCTGGCACCATCTCGAAGGACACGAGGCCATCTGTaGTGGTCCCGATGTGAATATAACCCTCATTCTTGC | + |
|
Preference number: 3 (lower is better) Translates to: HLAPSRRTRGHL*WSRCEYNPHSC Trigger: GCAAGAATGAGGGTTATATTCACATCGGGACCATCACAGATGGCCTCGTGTCCTTCGAGATGGTGCCAGATG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000163782.8 |
||
| 3UTR GCA 72 bp | CTCTTCCTGATCACTGTCCACCCTGGAAATCACCCTTaGCCTTTGGTCCTACCTTCCGGTATAAACTCTGGT | + |
|
Preference number: 3 (lower is better) Translates to: LFLITVHPGNHP*PLVLPSGINSG Trigger: ACCAGAGTTTATACCGGAAGGTAGGACCAAAGGGCAAGGGTGATTTCCAGGGTGGACAGTGATCAGGAAGAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000069861.4 ENSMUST00000163782.8 |
||
| 3UTR-3UTR CAA 90 bp | CTGTCAACTGAGCAAGGTGACTATTTAATCCCAGCACTCGGAACTGGGGCATGTACACTGGATGTCCACTaGGGGATTCCTCCACTATTG | + |
|
Preference number: 3 (lower is better) Translates to: LSTEQGDYLIPALGTGACTLDVH*GIPPLL Trigger: CAATAGTGGAGGAATCCCCAAGTGGACATCCAGTGT...ACATGCCCCAGTTCCGAGTGCTGGGATTAAATAGTCACCTTGCTCAGTTGACAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000069861.4 |
||
| 3UTR-3UTR CAA 90 bp | GTTGTAACGGAAGATTTCTTCCTCCGTGTAGTCTCTGATGGTGTTCAGTGTGCGGGAGCGCCCAAGACCTaGATCAACATGGAAGTCTTC | + |
|
Preference number: 3 (lower is better) Translates to: VVTEDFFLRVVSDGVQCAGAPKT*INMEVF Trigger: GAAGACTTCCATGTTGATCAAGGTCTTGGGCGCTCC...CGCACACTGAACACCATCAGAGACTACACGGAGGAAGAAATCTTCCGTTACAAC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000163782.8 |
||
| 3UTR-3UTR CAA 90 bp | GCTGTCCTCCGCCAACTCCCAACATGTCCACCTACCTTGTCCTTTGTTTTGTGTACAGCGAGTGTGTTATaGTTGTGGAAGCCCAAGGAT | + |
|
Preference number: 3 (lower is better) Translates to: AVLRQLPTCPPTLSFVLCTASVL*LWKPKD Trigger: ATCCTTGGGCTTCCACAACAATAACACACTCGCTGT...ACACAAAACAAAGGACAAGGTAGGTGGACATGTTGGGAGTTGGCGGAGGACAGC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000164653.8 |
||
| 3UTR CCA 72 bp | TCGCCAGTCACCAAGTCTTGGACTAAGAAGAAGGGCTaGAATAAGTCACGAAAGAGGAAGCATGGCATCTCG | + |
|
Preference number: 3 (lower is better) Translates to: SPVTKSWTKKKG*NKSRKRKHGIS Trigger: CGAGATGCCATGCTTCCTCTTTCGTGACTTATTCCAGCCCTTCTTCTTAGTCCAAGACTTGGTGACTGGCGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000163782.8 |
||
| 3UTR CCA 72 bp | TCACATGCGCATTCTTCAGCAACAGAGGACAGCTTTTaGGAGTCTTCCTCTTTCTACCATTCGGGTCTTGAG | + |
|
Preference number: 3 (lower is better) Translates to: SHAHSSATEDSF*ESSSFYHSGLE Trigger: CTCAAGACCCGAATGGTAGAAAGAGGAAGACTCCCAAAAGCTGTCCTCTGTTGCTGAAGAATGCGCATGTGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000069861.4 |
||
| 3UTR-3UTR CAA 90 bp | TGTGAATCTTTTGAGCGTTGGAAGACAGCTTGGTCTACAAGGGGAGTTCTGGGCAACAGAGGACAGCTTTaGGGAGTCTTCCTCTTTCTA | + |
|
Preference number: 3 (lower is better) Translates to: CESFERWKTAWSTRGVLGNRGQL*GVFLFL Trigger: TAGAAAGAGGAAGACTCCCAAAAGCTGTCCTCTGTT...GCCCAGAACTCCCCTTGTAGACCAAGCTGTCTTCCAACGCTCAAAAGATTCACA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000069861.4 |
||
| 3UTR-3UTR CAA 90 bp | TATGCCTGGGTCCCTGGGGAGATGGCTTACACCTACCTTTGCAGGATGAAGTTGCAGATGTACAACATGTaGTTCAATGTGTTGAAGAAC | + |
|
Preference number: 3 (lower is better) Translates to: YAWVPGEMAYTYLCRMKLQMYNM*FNVLKN Trigger: GTTCTTCAACACATTGAACAACATGTTGTACATCTG...CAACTTCATCCTGCAAAGGTAGGTGTAAGCCATCTCCCCAGGGACCCAGGCATA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000069861.4 |
||
| 3UTR-3UTR CAA 90 bp | ACCACAGTGAAGGTGAACCAGTTGCCCTTGTCTAGGAAGAAAAGATCGGGTATTGCGAGTGTGTTATTGTaGTGGAAGCCCAAGGATTCA | + |
|
Preference number: 3 (lower is better) Translates to: TTVKVNQLPLSRKKRSGIASVLL*WKPKDS Trigger: TGAATCCTTGGGCTTCCACAACAATAACACACTCGC...AATACCCGATCTTTTCTTCCTAGACAAGGGCAACTGGTTCACCTTCACTGTGGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000164653.8 |
||
| 3UTR-3UTR CAA 90 bp | TCTCTTTTTATCTATGACTTTAATCTTGGTGAGCAGAGTGTTGCGATTAAGAAGTGGGTCCTGCAGGGTTaGGGTGTGGGGCTTGATGCC | + |
|
Preference number: 3 (lower is better) Translates to: SLFIYDFNLGEQSVAIKKWVLQG*GVGLDA Trigger: GGCATCAAGCCCCACACCCAAACCCTGCAGGACCCA...CTTCTTAATCGCAACACTCTGCTCACCAAGATTAAAGTCATAGATAAAAAGAGA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000164653.8 |
||
| 3UTR-3UTR CAA 90 bp | GCTTTGCAGGATGAAGTTGCCCCAGATGTACAACATGTTGTTCAATGTGTTGAAGGTGTCATAGGAGTGTaGGTGTATGTCACTGGTCTC | + |
|
Preference number: 3 (lower is better) Translates to: ALQDEVAPDVQHVVQCVEGVIGV*VYVTGL Trigger: GAGACCAGTGACATACACCAACACTCCTATGACACC...TTCAACACATTGAACAACATGTTGTACATCTGGGGCAACTTCATCCTGCAAAGC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000163782.8 |
||
| 3UTR-3UTR CAA 90 bp | CATGCCCTGTTCGGAGCATCTCTTTTTATCTATGACTTTAATCTTGGTGAGCAGGTGAAGGTGAACCAGTaGCCCTTGTCTAGGAAGAAA | + |
|
Preference number: 3 (lower is better) Translates to: HALFGASLFIYDFNLGEQVKVNQ*PLSRKK Trigger: TTTCTTCCTAGACAAGGGCAACTGGTTCACCTTCAC...CTGCTCACCAAGATTAAAGTCATAGATAAAAAGAGATGCTCCGAACAGGGCATG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000163782.8 ENSMUST00000164653.8 |
||
| 3UTR TCA 72 bp | TGGTGGCAAGTGTCTGTACCCACTGAGCCACCTTGCTaGCATAGAATATCAAAATGCAAGTATGTGTATACA | + |
|
Preference number: 3 (lower is better) Translates to: WWQVSVPTEPPC*HRISKCKYVYT Trigger: TGTATACACATACTTGCATTTTGATATTCTATGTCAGCAAGGTGGCTCAGTGGGTACAGACACTTGCCACCA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000069861.4 |
||
| 3UTR TCA 72 bp | CTTTTGGGAGTCTTCCTCTTTCTACCATTCGGGTCTTaGGAATTGAGCTTAGGTTATCACTTTTGGTGGCAA | + |
|
Preference number: 3 (lower is better) Translates to: LLGVFLFLPFGS*ELSLGYHFWWQ Trigger: TTGCCACCAAAAGTGATAACCTAAGCTCAATTCTCAAGACCCGAATGGTAGAAAGAGGAAGACTCCCAAAAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000069861.4 |
||
| 3UTR TCA 72 bp | CAGCTCCAAGAGAACATAGTCCTGGAAATTAGAATCTaGGAACAGGATGGCCTTTTCATCATAAAAGCCTCC | + |
|
Preference number: 3 (lower is better) Translates to: QLQENIVLEIRI*EQDGLFIIKAS Trigger: GGAGGCTTTTATGATGAAAAGGCCATCCTGTTCTCAGATTCTAATTTCCAGGACTATGTTCTCTTGGAGCTG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000163782.8 |
||
| 3UTR GCA 72 bp | TCTATGTCATTATGTATGTGTATGCGTGCATTCACATaGGCATTCTTCAGCAACAGAGGACAGCTTTTGGGA | + |
|
Preference number: 3 (lower is better) Translates to: SMSLCMCMRAFT*AFFSNRGQLLG Trigger: TCCCAAAAGCTGTCCTCTGTTGCTGAAGAATGCGCATGTGAATGCACGCATACACATACATAATGACATAGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000069861.4 |
||
| 3UTR-3UTR CAA 90 bp | TCTATGACTTTAATCTTGGTGAGCAGAGTGTTGCGATTAAGAAGGAACTCCCGAGACAATGACAGCTTCTaGTCCACATTAATAGTGGGT | + |
|
Preference number: 3 (lower is better) Translates to: SMTLILVSRVLRLRRNSRDNDSF*STLIVG Trigger: ACCCACTATTAATGTGGACAAGAAGCTGTCATTGTC...TCGGGAGTTCCTTCTTAATCGCAACACTCTGCTCACCAAGATTAAAGTCATAGA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000163782.8 ENSMUST00000164653.8 |
||
| 3UTR-3UTR CAA 90 bp | TCTCTTTTTATCTATGACTTTAATCTTGGTGAGCAGAGTGTTGCGATTAAGAAGACGTACTCAGAACCATaGCCACTGAAATACACCGGG | + |
|
Preference number: 3 (lower is better) Translates to: SLFIYDFNLGEQSVAIKKTYSEP*PLKYTG Trigger: CCCGGTGTATTTCAGTGGCAATGGTTCTGAGTACGT...CTTCTTAATCGCAACACTCTGCTCACCAAGATTAAAGTCATAGATAAAAAGAGA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000163782.8 |
||
| CDS-3UTR TCA 90 bp | GAGGTGGCAGGCTGCATTCCCATGAGGAGAGGCCTAAGGGTTCATGAGGAAGAGTGTGAGAATGGAGGGTaGAGCCCCCAGAAGAGGAGG | + |
|
Preference number: 4 (lower is better) Translates to: EVAGCIPMRRGLRVHEEECENGG*SPQKRR Trigger: CCTCCTCTTCTGGGGGCTTCACCCTCCATTCTCACA...CTCTTCCTCATGAACCCTTAGGCCTCTCCTCATGGGAATGCAGCCTGCCACCTC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000047846.13 ENSMUST00000169143.8 |
||
| CDS-3UTR GCA 90 bp | GAGGTGGCAGGCTGCATTCCCATGAGGAGAGGCCTAAGGGTTCATGAGGAAGAGTGTACCAGTTCAGGATaGACATGGCCTCTGCCGGGC | + |
|
Preference number: 4 (lower is better) Translates to: EVAGCIPMRRGLRVHEEECTSSG*TWPLPG Trigger: GCCCGGCAGAGGCCATGTGCATCCTGAACTGGTACA...CTCTTCCTCATGAACCCTTAGGCCTCTCCTCATGGGAATGCAGCCTGCCACCTC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000047846.13 ENSMUST00000169143.8 |
||
| CDS-3UTR CCA 90 bp | GCCTGGGTCCCTGGGGAGATGGCTTACACCTACCTTTGCAGGATGAAGTTGCCCAGAGTGTGCTCTCGGTaGCAATGGCGTCATGGATGG | + |
|
Preference number: 4 (lower is better) Translates to: AWVPGEMAYTYLCRMKLPRVCSR*QWRHGW Trigger: CCATCCATGACGCCATTGCCACCGAGAGCACACTCT...GGGCAACTTCATCCTGCAAAGGTAGGTGTAAGCCATCTCCCCAGGGACCCAGGC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000069861.4 |
||
| CDS-3UTR TCA 90 bp | GTGGCAGGCTGCATTCCCATGAGGAGAGGCCTAAGGGTTCATGAGGAAGAGTACTGTGAGAATGGAGGGTaGAGCCCCCAGAAGAGGAGG | + |
|
Preference number: 4 (lower is better) Translates to: VAGCIPMRRGLRVHEEEYCENGG*SPQKRR Trigger: CCTCCTCTTCTGGGGGCTTCACCCTCCATTCTCACA...GTACTCTTCCTCATGAACCCTTAGGCCTCTCCTCATGGGAATGCAGCCTGCCAC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000047846.13 ENSMUST00000169143.8 |
||
| CDS-3UTR TCA 90 bp | GTGGCAGGCTGCATTCCCATGAGGAGAGGCCTAAGGGTTCATGAGGAAGAGTACCTTCCCTCTGAGCTGTaGGAATGGAGGGTGAAGCCC | + |
|
Preference number: 4 (lower is better) Translates to: VAGCIPMRRGLRVHEEEYLPSEL*EWRVKP Trigger: GGGCTTCACCCTCCATTCTCACAGCTCAGAGGGAAG...GTACTCTTCCTCATGAACCCTTAGGCCTCTCCTCATGGGAATGCAGCCTGCCAC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000047846.13 ENSMUST00000169143.8 |
||
| CDS-3UTR GCA 90 bp | GTGGCAGGCTGCATTCCCATGAGGAGAGGCCTAAGGGTTCATGAGGAAGAGTACTGTACCAGTTCAGGATaGACATGGCCTCTGCCGGGC | + |
|
Preference number: 4 (lower is better) Translates to: VAGCIPMRRGLRVHEEEYCTSSG*TWPLPG Trigger: GCCCGGCAGAGGCCATGTGCATCCTGAACTGGTACA...GTACTCTTCCTCATGAACCCTTAGGCCTCTCCTCATGGGAATGCAGCCTGCCAC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000047846.13 ENSMUST00000169143.8 |
||
| 3UTR CAA 72 bp | GCTGTCCTCCGCCAACTCCCAACATGTCCACCTACCTaGTCCTTTGTTTTGTGTTGCCACCAGCGCCAGGTG | + |
|
Preference number: 4 (lower is better) Translates to: AVLRQLPTCPPT*SFVLCCHQRQV Trigger: CACCTGGCGCTGGTGGCAACACAAAACAAAGGACAAGGTAGGTGGACATGTTGGGAGTTGGCGGAGGACAGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000164653.8 |
||
| CDS-3UTR TCA 90 bp | GTGGCAGGCTGCATTCCCATGAGGAGAGGCCTAAGGGTTCATGAGGAAGAGTACGCTGGTTCTGTCGAATaGAGAGTGTGCTCTCGGTGG | + |
|
Preference number: 4 (lower is better) Translates to: VAGCIPMRRGLRVHEEEYAGSVE*RVCSRW Trigger: CCACCGAGAGCACACTCTTCATTCGACAGAACCAGC...GTACTCTTCCTCATGAACCCTTAGGCCTCTCCTCATGGGAATGCAGCCTGCCAC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000047846.13 ENSMUST00000169143.8 |
||
| CDS-3UTR CCA 90 bp | GTGGCAGGCTGCATTCCCATGAGGAGAGGCCTAAGGGTTCATGAGGAAGAGTACAGAGTGTGCTCTCGGTaGCAATGGCGTCATGGATGG | + |
|
Preference number: 4 (lower is better) Translates to: VAGCIPMRRGLRVHEEEYRVCSR*QWRHGW Trigger: CCATCCATGACGCCATTGCCACCGAGAGCACACTCT...GTACTCTTCCTCATGAACCCTTAGGCCTCTCCTCATGGGAATGCAGCCTGCCAC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000047846.13 ENSMUST00000169143.8 |
||
| CDS-3UTR CCA 90 bp | GAGGTGGCAGGCTGCATTCCCATGAGGAGAGGCCTAAGGGTTCATGAGGAAGAGGTCCTCTTTGGTACCTaGTCTGGAGGGACCCTCAAA | + |
|
Preference number: 4 (lower is better) Translates to: EVAGCIPMRRGLRVHEEEVLFGT*SGGTLK Trigger: TTTGAGGGTCCCTCCAGACCAGGTACCAAAGAGGAC...CTCTTCCTCATGAACCCTTAGGCCTCTCCTCATGGGAATGCAGCCTGCCACCTC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000047846.13 ENSMUST00000169143.8 |
||
| 3UTR CAA 72 bp | TCCGCCAACTCCCAACATGTCCACCTACCTTGTCCTTaGTTTTGTGTTGCCACCAGCGCCAGGTGGGATCGT | + |
|
Preference number: 4 (lower is better) Translates to: SANSQHVHLPCP*FCVATSARWDR Trigger: ACGATCCCACCTGGCGCTGGTGGCAACACAAAACAAAGGACAAGGTAGGTGGACATGTTGGGAGTTGGCGGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000164653.8 |
||
| CDS-3UTR TCA 90 bp | GAGGTGGCAGGCTGCATTCCCATGAGGAGAGGCCTAAGGGTTCATGAGGAAGAGGAGCGCCCAAGACCTTaGTCAACATGGAAGTCTTCT | + |
|
Preference number: 4 (lower is better) Translates to: EVAGCIPMRRGLRVHEEEERPRP*STWKSS Trigger: AGAAGACTTCCATGTTGATCAAGGTCTTGGGCGCTC...CTCTTCCTCATGAACCCTTAGGCCTCTCCTCATGGGAATGCAGCCTGCCACCTC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000047846.13 ENSMUST00000169143.8 |
||
| CDS-3UTR TCA 90 bp | GAGGTGGCAGGCTGCATTCCCATGAGGAGAGGCCTAAGGGTTCATGAGGAAGAGCTCAAAACTTCCCTCTaGGCTGTGAGAATGGAGGGT | + |
|
Preference number: 4 (lower is better) Translates to: EVAGCIPMRRGLRVHEEELKTSL*AVRMEG Trigger: ACCCTCCATTCTCACAGCTCAGAGGGAAGTTTTGAG...CTCTTCCTCATGAACCCTTAGGCCTCTCCTCATGGGAATGCAGCCTGCCACCTC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000047846.13 ENSMUST00000169143.8 |
||
| CDS-3UTR GCA 90 bp | GCCACCAGCGCCAGGTGGGATCGTGCACTGGGTCTGCATAGGGCTTATCATACTCCGCAGTACCCAGAATaGCCAAAGGTTTGGTTTTCT | + |
|
Preference number: 4 (lower is better) Translates to: ATSARWDRALGLHRAYHTPQYPE*PKVWFS Trigger: AGAAAACCAAACCTTTGGGCATTCTGGGTACTGCGG...AGTATGATAAGCCCTATGCAGACCCAGTGCACGATCCCACCTGGCGCTGGTGGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000164653.8 |
||
| CDS-3UTR GCA 90 bp | GAGGTGGCAGGCTGCATTCCCATGAGGAGAGGCCTAAGGGTTCATGAGGAAGAGCGATCCTTGGAGAGATaGAAGCCTACCTTCTCGAAC | + |
|
Preference number: 4 (lower is better) Translates to: EVAGCIPMRRGLRVHEEERSLER*KPTFSN Trigger: GTTCGAGAAGGTAGGCTTGCATCTCTCCAAGGATCG...CTCTTCCTCATGAACCCTTAGGCCTCTCCTCATGGGAATGCAGCCTGCCACCTC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000047846.13 ENSMUST00000169143.8 |
||
| CDS-3UTR GCA 90 bp | GAGGTGGCAGGCTGCATTCCCATGAGGAGAGGCCTAAGGGTTCATGAGGAAGAGGGACACGAACCCATCTaGTACTGCCATGGCTTTTGT | + |
|
Preference number: 4 (lower is better) Translates to: EVAGCIPMRRGLRVHEEEGHEPI*YCHGFC Trigger: ACAAAAGCCATGGCAGTAGCAGATGGGTTCGTGTCC...CTCTTCCTCATGAACCCTTAGGCCTCTCCTCATGGGAATGCAGCCTGCCACCTC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000047846.13 ENSMUST00000169143.8 |
||
| CDS-3UTR GCA 90 bp | GTGGCAGGCTGCATTCCCATGAGGAGAGGCCTAAGGGTTCATGAGGAAGAGTACTCCTTTGTTTTGTGTTaGCACCAGCGCCAGGTGGGA | + |
|
Preference number: 4 (lower is better) Translates to: VAGCIPMRRGLRVHEEEYSFVLC*HQRQVG Trigger: TCCCACCTGGCGCTGGTGGCAACACAAAACAAAGGA...GTACTCTTCCTCATGAACCCTTAGGCCTCTCCTCATGGGAATGCAGCCTGCCAC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000047846.13 ENSMUST00000169143.8 |
||
| CDS-3UTR GCA 90 bp | GTGGCAGGCTGCATTCCCATGAGGAGAGGCCTAAGGGTTCATGAGGAAGAGTACAACTGCCCAAGAAACTaGCAGAGTCGCCAGTCACCA | + |
|
Preference number: 4 (lower is better) Translates to: VAGCIPMRRGLRVHEEEYNCPRN*QSRQSP Trigger: TGGTGACTGGCGACTCTGGCAGTTTCTTGGGCAGTT...GTACTCTTCCTCATGAACCCTTAGGCCTCTCCTCATGGGAATGCAGCCTGCCAC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000047846.13 ENSMUST00000169143.8 |
||
| CDS-3UTR CCA 90 bp | GAGGTGGCAGGCTGCATTCCCATGAGGAGAGGCCTAAGGGTTCATGAGGAAGAGCTTTGGTACCTGGTCTaGAGGGACCCTCAAAACTTC | + |
|
Preference number: 4 (lower is better) Translates to: EVAGCIPMRRGLRVHEEELWYLV*RDPQNF Trigger: GAAGTTTTGAGGGTCCCTCCAGACCAGGTACCAAAG...CTCTTCCTCATGAACCCTTAGGCCTCTCCTCATGGGAATGCAGCCTGCCACCTC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000047846.13 ENSMUST00000169143.8 |
||
| CDS-3UTR CCA 90 bp | GAGGTGGCAGGCTGCATTCCCATGAGGAGAGGCCTAAGGGTTCATGAGGAAGAGGAACATTGTCCTCTTTaGTACCTGGTCTGGAGGGAC | + |
|
Preference number: 4 (lower is better) Translates to: EVAGCIPMRRGLRVHEEEEHCPL*YLVWRD Trigger: GTCCCTCCAGACCAGGTACCAAAGAGGACAATGTTC...CTCTTCCTCATGAACCCTTAGGCCTCTCCTCATGGGAATGCAGCCTGCCACCTC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000047846.13 ENSMUST00000169143.8 |
||
| 3UTR CAA 72 bp | GAACCATTGCCACTGAAATACACCGGGCACAGTCTCTaGATGCACTCGCTAGGCAGGACACGAACCCATCTG | + |
|
Preference number: 4 (lower is better) Translates to: EPLPLKYTGHSL*MHSLGRTRTHL Trigger: CAGATGGGTTCGTGTCCTGCCTAGCGAGTGCATCAAGAGACTGTGCCCGGTGTATTTCAGTGGCAATGGTTC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000163782.8 |
||
| 3UTR CAA 72 bp | CAACTCCCAACATGTCCACCTACCTTGTCCTTTGTTTaGTGTTGCCACCAGCGCCAGGTGGGATCGTGCACT | + |
|
Preference number: 4 (lower is better) Translates to: QLPTCPPTLSFV*CCHQRQVGSCT Trigger: AGTGCACGATCCCACCTGGCGCTGGTGGCAACACAAAACAAAGGACAAGGTAGGTGGACATGTTGGGAGTTG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000164653.8 |
||
| CDS-3UTR TCA 90 bp | GTGTTGCCACCAGCGCCAGGTGGGATCGTGCACTGGGTCTGCATAGGGCTTATCAGTCCGCCAGAAAAATaGATTCTTCCCTATTGTAGC | + |
|
Preference number: 4 (lower is better) Translates to: VLPPAPGGIVHWVCIGLISPPEK*ILPYCS Trigger: GCTACAATAGGGAAGAATTCATTTTTCTGGCGGACT...GATAAGCCCTATGCAGACCCAGTGCACGATCCCACCTGGCGCTGGTGGCAACAC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000164653.8 |
||
| CDS-3UTR TCA 90 bp | GAGGTGGCAGGCTGCATTCCCATGAGGAGAGGCCTAAGGGTTCATGAGGAAGAGCAGGCAGGAGCCTCTTaGCTAAACGTTCTTTTCCAA | + |
|
Preference number: 4 (lower is better) Translates to: EVAGCIPMRRGLRVHEEEQAGAS*LNVLFQ Trigger: TTGGAAAAGAACGTTTAGTCAAGAGGCTCCTGCCTG...CTCTTCCTCATGAACCCTTAGGCCTCTCCTCATGGGAATGCAGCCTGCCACCTC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000047846.13 ENSMUST00000169143.8 |
||
| CDS-3UTR TCA 90 bp | GTGGCAGGCTGCATTCCCATGAGGAGAGGCCTAAGGGTTCATGAGGAAGAGTACGAGCGCCCAAGACCTTaGTCAACATGGAAGTCTTCT | + |
|
Preference number: 4 (lower is better) Translates to: VAGCIPMRRGLRVHEEEYERPRP*STWKSS Trigger: AGAAGACTTCCATGTTGATCAAGGTCTTGGGCGCTC...GTACTCTTCCTCATGAACCCTTAGGCCTCTCCTCATGGGAATGCAGCCTGCCAC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000047846.13 ENSMUST00000169143.8 |
||
| CDS-3UTR TCA 90 bp | GAGGTGGCAGGCTGCATTCCCATGAGGAGAGGCCTAAGGGTTCATGAGGAAGAGAGAAGAGGAGGAAGATaGATAGGTCTCTGGTGCCAT | + |
|
Preference number: 4 (lower is better) Translates to: EVAGCIPMRRGLRVHEEERRGGR*IGLWCH Trigger: ATGGCACCAGAGACCTATTCATCTTCCTCCTCTTCT...CTCTTCCTCATGAACCCTTAGGCCTCTCCTCATGGGAATGCAGCCTGCCACCTC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000047846.13 ENSMUST00000169143.8 |
||
| CDS-3UTR GCA 90 bp | GAGGTGGCAGGCTGCATTCCCATGAGGAGAGGCCTAAGGGTTCATGAGGAAGAGCCGCAGTACCCAGAATaGCCAAAGGTTTGGTTTTCT | + |
|
Preference number: 4 (lower is better) Translates to: EVAGCIPMRRGLRVHEEEPQYPE*PKVWFS Trigger: AGAAAACCAAACCTTTGGGCATTCTGGGTACTGCGG...CTCTTCCTCATGAACCCTTAGGCCTCTCCTCATGGGAATGCAGCCTGCCACCTC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000047846.13 ENSMUST00000169143.8 |
||
| CDS-3UTR GCA 90 bp | GCCACCAGCGCCAGGTGGGATCGTGCACTGGGTCTGCATAGGGCTTATCATACTGAACCCATCTGCTACTaGCATGGCTTTTGTCAAAGA | + |
|
Preference number: 4 (lower is better) Translates to: ATSARWDRALGLHRAYHTEPICY*HGFCQR Trigger: TCTTTGACAAAAGCCATGGCAGTAGCAGATGGGTTC...AGTATGATAAGCCCTATGCAGACCCAGTGCACGATCCCACCTGGCGCTGGTGGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000164653.8 |
||
| CDS-3UTR GCA 90 bp | GTGGCAGGCTGCATTCCCATGAGGAGAGGCCTAAGGGTTCATGAGGAAGAGTACGGACACGAACCCATCTaGTACTGCCATGGCTTTTGT | + |
|
Preference number: 4 (lower is better) Translates to: VAGCIPMRRGLRVHEEEYGHEPI*YCHGFC Trigger: ACAAAAGCCATGGCAGTAGCAGATGGGTTCGTGTCC...GTACTCTTCCTCATGAACCCTTAGGCCTCTCCTCATGGGAATGCAGCCTGCCAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000047846.13 ENSMUST00000169143.8 |
||
| CDS-3UTR CCA 90 bp | GAGGTGGCAGGCTGCATTCCCATGAGGAGAGGCCTAAGGGTTCATGAGGAAGAGCATCTGCTACTGCCATaGCTTTTGTCAAAGAGCGTG | + |
|
Preference number: 4 (lower is better) Translates to: EVAGCIPMRRGLRVHEEEHLLLP*LLSKSV Trigger: CACGCTCTTTGACAAAAGCCATGGCAGTAGCAGATG...CTCTTCCTCATGAACCCTTAGGCCTCTCCTCATGGGAATGCAGCCTGCCACCTC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000047846.13 ENSMUST00000169143.8 |
||
| CDS-3UTR CCA 90 bp | GTGGCAGGCTGCATTCCCATGAGGAGAGGCCTAAGGGTTCATGAGGAAGAGTACCTTTGGTACCTGGTCTaGAGGGACCCTCAAAACTTC | + |
|
Preference number: 4 (lower is better) Translates to: VAGCIPMRRGLRVHEEEYLWYLV*RDPQNF Trigger: GAAGTTTTGAGGGTCCCTCCAGACCAGGTACCAAAG...GTACTCTTCCTCATGAACCCTTAGGCCTCTCCTCATGGGAATGCAGCCTGCCAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000047846.13 ENSMUST00000169143.8 |
||
| CDS-3UTR CCA 90 bp | GTGGCAGGCTGCATTCCCATGAGGAGAGGCCTAAGGGTTCATGAGGAAGAGTACGAACATTGTCCTCTTTaGTACCTGGTCTGGAGGGAC | + |
|
Preference number: 4 (lower is better) Translates to: VAGCIPMRRGLRVHEEEYEHCPL*YLVWRD Trigger: GTCCCTCCAGACCAGGTACCAAAGAGGACAATGTTC...GTACTCTTCCTCATGAACCCTTAGGCCTCTCCTCATGGGAATGCAGCCTGCCAC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000047846.13 ENSMUST00000169143.8 |
||
| 3UTR CAA 72 bp | TGCCTGGGTCCCTGGGGAGATGGCTTACACCTACCTTaGCAGGATGAAGTTGCCCCAGATGTACAACATGTT | + |
|
Preference number: 4 (lower is better) Translates to: CLGPWGDGLHLP*QDEVAPDVQHV Trigger: AACATGTTGTACATCTGGGGCAACTTCATCCTGCAAAGGTAGGTGTAAGCCATCTCCCCAGGGACCCAGGCA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000069861.4 |
||
| 3UTR CAA 72 bp | TTGCCAGTGGTGAGGGCTAGGACGTACTCAGAACCATaGCCACTGAAATACACCGGGCACAGTCTCTTGATG | + |
|
Preference number: 4 (lower is better) Translates to: LPVVRARTYSEP*PLKYTGHSLLM Trigger: CATCAAGAGACTGTGCCCGGTGTATTTCAGTGGCAATGGTTCTGAGTACGTCCTAGCCCTCACCACTGGCAA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000163782.8 |
||
| CDS-3UTR TCA 90 bp | GTGGCAGGCTGCATTCCCATGAGGAGAGGCCTAAGGGTTCATGAGGAAGAGTACGGTGCCATCATGTTGTaGATCTTCCAGCGAAATGAG | + |
|
Preference number: 4 (lower is better) Translates to: VAGCIPMRRGLRVHEEEYGAIML*IFQRNE Trigger: CTCATTTCGCTGGAAGATTCACAACATGATGGCACC...GTACTCTTCCTCATGAACCCTTAGGCCTCTCCTCATGGGAATGCAGCCTGCCAC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000047846.13 ENSMUST00000169143.8 |
||
| CDS-3UTR GCA 90 bp | GTGGCAGGCTGCATTCCCATGAGGAGAGGCCTAAGGGTTCATGAGGAAGAGTACCCGCAGTACCCAGAATaGCCAAAGGTTTGGTTTTCT | + |
|
Preference number: 4 (lower is better) Translates to: VAGCIPMRRGLRVHEEEYPQYPE*PKVWFS Trigger: AGAAAACCAAACCTTTGGGCATTCTGGGTACTGCGG...GTACTCTTCCTCATGAACCCTTAGGCCTCTCCTCATGGGAATGCAGCCTGCCAC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000047846.13 ENSMUST00000169143.8 |
||
| CDS-3UTR GCA 90 bp | GAGGTGGCAGGCTGCATTCCCATGAGGAGAGGCCTAAGGGTTCATGAGGAAGAGGAACCCATCTGCTACTaGCATGGCTTTTGTCAAAGA | + |
|
Preference number: 4 (lower is better) Translates to: EVAGCIPMRRGLRVHEEEEPICY*HGFCQR Trigger: TCTTTGACAAAAGCCATGGCAGTAGCAGATGGGTTC...CTCTTCCTCATGAACCCTTAGGCCTCTCCTCATGGGAATGCAGCCTGCCACCTC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000047846.13 ENSMUST00000169143.8 |
||
| CDS-3UTR TCA 90 bp | GAGGTGGCAGGCTGCATTCCCATGAGGAGAGGCCTAAGGGTTCATGAGGAAGAGACGGTAGAAATTGACTaGGTACATGTAGTTGATCCG | + |
|
Preference number: 4 (lower is better) Translates to: EVAGCIPMRRGLRVHEEETVEID*VHVVDP Trigger: CGGATCAACTACATGTACTCAGTCAATTTCTACCGT...CTCTTCCTCATGAACCCTTAGGCCTCTCCTCATGGGAATGCAGCCTGCCACCTC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000047846.13 ENSMUST00000163782.8 ENSMUST00000169143.8 |
||
| CDS-3UTR TCA 90 bp | GAGGTGGCAGGCTGCATTCCCATGAGGAGAGGCCTAAGGGTTCATGAGGAAGAGCTGGAAATTAGAATCTaGGAACAGGATGGCCTTTTC | + |
|
Preference number: 4 (lower is better) Translates to: EVAGCIPMRRGLRVHEEELEIRI*EQDGLF Trigger: GAAAAGGCCATCCTGTTCTCAGATTCTAATTTCCAG...CTCTTCCTCATGAACCCTTAGGCCTCTCCTCATGGGAATGCAGCCTGCCACCTC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000047846.13 ENSMUST00000169143.8 |
||
| CDS-3UTR TCA 90 bp | GAGGTGGCAGGCTGCATTCCCATGAGGAGAGGCCTAAGGGTTCATGAGGAAGAGAGTCCGCCAGAAAAATaGATTCTTCCCTATTGTAGC | + |
|
Preference number: 4 (lower is better) Translates to: EVAGCIPMRRGLRVHEEESPPEK*ILPYCS Trigger: GCTACAATAGGGAAGAATTCATTTTTCTGGCGGACT...CTCTTCCTCATGAACCCTTAGGCCTCTCCTCATGGGAATGCAGCCTGCCACCTC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000047846.13 ENSMUST00000169143.8 |
||
| CDS-3UTR TCA 90 bp | GTGGCAGGCTGCATTCCCATGAGGAGAGGCCTAAGGGTTCATGAGGAAGAGTACCAGTACCAGAGACAATaGCAGCTTCTTGTCCACATT | + |
|
Preference number: 4 (lower is better) Translates to: VAGCIPMRRGLRVHEEEYQYQRQ*QLLVHI Trigger: AATGTGGACAAGAAGCTGTCATTGTCTCTGGTACTG...GTACTCTTCCTCATGAACCCTTAGGCCTCTCCTCATGGGAATGCAGCCTGCCAC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000047846.13 ENSMUST00000169143.8 |
||
| CDS-3UTR GCA 90 bp | GTGGCAGGCTGCATTCCCATGAGGAGAGGCCTAAGGGTTCATGAGGAAGAGTACGAACCCATCTGCTACTaGCATGGCTTTTGTCAAAGA | + |
|
Preference number: 4 (lower is better) Translates to: VAGCIPMRRGLRVHEEEYEPICY*HGFCQR Trigger: TCTTTGACAAAAGCCATGGCAGTAGCAGATGGGTTC...GTACTCTTCCTCATGAACCCTTAGGCCTCTCCTCATGGGAATGCAGCCTGCCAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000047846.13 ENSMUST00000169143.8 |
||
| CDS-3UTR GCA 90 bp | GAGGTGGCAGGCTGCATTCCCATGAGGAGAGGCCTAAGGGTTCATGAGGAAGAGCAACATAGCTCTCTGTaGGTGATGCATGCTGTTTTT | + |
|
Preference number: 4 (lower is better) Translates to: EVAGCIPMRRGLRVHEEEQHSSL*VMHAVF Trigger: AAAAACAGCATGCATCACGCACAGAGAGCTATGTTG...CTCTTCCTCATGAACCCTTAGGCCTCTCCTCATGGGAATGCAGCCTGCCACCTC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000047846.13 ENSMUST00000169143.8 |
||
| CDS-3UTR CCA 90 bp | CAGGTAATAGACGAGGCCTTGATAGACAGCGAGTGTGTTATTGTTGTGGAAGCCAGAGTGTGCTCTCGGTaGCAATGGCGTCATGGATGG | + |
|
Preference number: 4 (lower is better) Translates to: QVIDEALIDSECVIVVEARVCSR*QWRHGW Trigger: CCATCCATGACGCCATTGCCACCGAGAGCACACTCT...GGCTTCCACAACAATAACACACTCGCTGTCTATCAAGGCCTCGTCTATTACCTG 51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000164653.8 |
||
| CDS-3UTR CCA 90 bp | TGTCCTAGACACACTGGCTTCACCAGCCCACTGCACACCTTATCTAAGAGTGGCCATCTGCTACTGCCATaGCTTTTGTCAAAGAGCGTG | + |
|
Preference number: 4 (lower is better) Translates to: CPRHTGFTSPLHTLSKSGHLLLP*LLSKSV Trigger: CACGCTCTTTGACAAAAGCCATGGCAGTAGCAGATG...GCCACTCTTAGATAAGGTGTGCAGTGGGCTGGTGAAGCCAGTGTGTCTAGGACA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000069861.4 |
||
| CDS-3UTR CCA 90 bp | GAGGTGGCAGGCTGCATTCCCATGAGGAGAGGCCTAAGGGTTCATGAGGAAGAGACTAAGAAGAAGGGCTaGAATAAGTCACGAAAGAGG | + |
|
Preference number: 4 (lower is better) Translates to: EVAGCIPMRRGLRVHEEETKKKG*NKSRKR Trigger: CCTCTTTCGTGACTTATTCCAGCCCTTCTTCTTAGT...CTCTTCCTCATGAACCCTTAGGCCTCTCCTCATGGGAATGCAGCCTGCCACCTC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000047846.13 ENSMUST00000169143.8 |
||
| 3UTR CAA 72 bp | CAGGTAAAAGAAGTAATCCTTGTCCTTTGTTTTGTGTaGCCACCAGCGCCAGGTGGGATCGTGCACTGGGTC | + |
|
Preference number: 4 (lower is better) Translates to: QVKEVILVLCFV*PPAPGGIVHWV Trigger: GACCCAGTGCACGATCCCACCTGGCGCTGGTGGCAACACAAAACAAAGGACAAGGATTACTTCTTTTACCTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000163782.8 |
||
| 3UTR CAA 72 bp | GTGCGCTGGATGCAATTCCCAGGAGCGCCCAAGACCTaGATCAACATGGAAGTCTTCTTGATGTTACGTCCA | + |
|
Preference number: 4 (lower is better) Translates to: VRWMQFPGAPKT*INMEVFLMLRP Trigger: TGGACGTAACATCAAGAAGACTTCCATGTTGATCAAGGTCTTGGGCGCTCCTGGGAATTGCATCCAGCGCAC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000163782.8 ENSMUST00000164653.8 |
||
| 3UTR CAA 72 bp | CTTGGAGTGCAGCCACAGCAGGTAATAGACGAGGCCTaGATAGACAGCGAGTGTGTTATTGTTGTGGAAGCC | + |
|
Preference number: 4 (lower is better) Translates to: LGVQPQQVIDEA*IDSECVIVVEA Trigger: GGCTTCCACAACAATAACACACTCGCTGTCTATCAAGGCCTCGTCTATTACCTGCTGTGGCTGCACTCCAAG 51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000164653.8 |
||
| 3UTR CAA 72 bp | TCAGGATCCGCCAGTACCAGAGACAATGACAGCTTCTaGTCCACATTAATAGTGGGTCCTGCAGGGTTTGGG | + |
|
Preference number: 4 (lower is better) Translates to: SGSASTRDNDSF*STLIVGPAGFG Trigger: CCCAAACCCTGCAGGACCCACTATTAATGTGGACAAGAAGCTGTCATTGTCTCTGGTACTGGCGGATCCTGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000164653.8 |
||
| CDS-3UTR TCA 90 bp | GTGGCAGGCTGCATTCCCATGAGGAGAGGCCTAAGGGTTCATGAGGAAGAGTACCTGGAAATTAGAATCTaGGAACAGGATGGCCTTTTC | + |
|
Preference number: 4 (lower is better) Translates to: VAGCIPMRRGLRVHEEEYLEIRI*EQDGLF Trigger: GAAAAGGCCATCCTGTTCTCAGATTCTAATTTCCAG...GTACTCTTCCTCATGAACCCTTAGGCCTCTCCTCATGGGAATGCAGCCTGCCAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000047846.13 ENSMUST00000169143.8 |
||
| CDS-3UTR TCA 90 bp | GTGGCAGGCTGCATTCCCATGAGGAGAGGCCTAAGGGTTCATGAGGAAGAGTACAGTCCGCCAGAAAAATaGATTCTTCCCTATTGTAGC | + |
|
Preference number: 4 (lower is better) Translates to: VAGCIPMRRGLRVHEEEYSPPEK*ILPYCS Trigger: GCTACAATAGGGAAGAATTCATTTTTCTGGCGGACT...GTACTCTTCCTCATGAACCCTTAGGCCTCTCCTCATGGGAATGCAGCCTGCCAC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000047846.13 ENSMUST00000169143.8 |
||
| CDS-3UTR TCA 90 bp | GAGGTGGCAGGCTGCATTCCCATGAGGAGAGGCCTAAGGGTTCATGAGGAAGAGTTTGCTCTCTTAGCTTaGACATTGTCCTCTTTGGTA | + |
|
Preference number: 4 (lower is better) Translates to: EVAGCIPMRRGLRVHEEEFALLA*TLSSLV Trigger: TACCAAAGAGGACAATGTTCAAGCTAAGAGAGCAAA...CTCTTCCTCATGAACCCTTAGGCCTCTCCTCATGGGAATGCAGCCTGCCACCTC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000047846.13 ENSMUST00000169143.8 |
||
| CDS-3UTR GCA 90 bp | ATAAACAAATATGTGTGTGTTTCCAGGCGCATCTGTATGCCTGGGTCCCTGGGGGGACACGAACCCATCTaGTACTGCCATGGCTTTTGT | + |
|
Preference number: 4 (lower is better) Translates to: INKYVCVSRRICMPGSLGGHEPI*YCHGFC Trigger: ACAAAAGCCATGGCAGTAGCAGATGGGTTCGTGTCC...CCCCAGGGACCCAGGCATACAGATGCGCCTGGAAACACACACATATTTGTTTAT 50% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000069861.4 |
||
| CDS-3UTR GCA 90 bp | GTGGCAGGCTGCATTCCCATGAGGAGAGGCCTAAGGGTTCATGAGGAAGAGTACCAACATAGCTCTCTGTaGGTGATGCATGCTGTTTTT | + |
|
Preference number: 4 (lower is better) Translates to: VAGCIPMRRGLRVHEEEYQHSSL*VMHAVF Trigger: AAAAACAGCATGCATCACGCACAGAGAGCTATGTTG...GTACTCTTCCTCATGAACCCTTAGGCCTCTCCTCATGGGAATGCAGCCTGCCAC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000047846.13 ENSMUST00000169143.8 |
||
| CDS-3UTR CCA 90 bp | GTGGCAGGCTGCATTCCCATGAGGAGAGGCCTAAGGGTTCATGAGGAAGAGTACACTAAGAAGAAGGGCTaGAATAAGTCACGAAAGAGG | + |
|
Preference number: 4 (lower is better) Translates to: VAGCIPMRRGLRVHEEEYTKKKG*NKSRKR Trigger: CCTCTTTCGTGACTTATTCCAGCCCTTCTTCTTAGT...GTACTCTTCCTCATGAACCCTTAGGCCTCTCCTCATGGGAATGCAGCCTGCCAC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000047846.13 ENSMUST00000169143.8 |
||
| CDS-3UTR TCA 90 bp | TTGTCCTCTTTGGTACCTGGTCTGGAGGGACCCTCAAAACTTCCCTCTGAGCTGACGGTAGAAATTGACTaGGTACATGTAGTTGATCCG | + |
|
Preference number: 4 (lower is better) Translates to: LSSLVPGLEGPSKLPSELTVEID*VHVVDP Trigger: CGGATCAACTACATGTACTCAGTCAATTTCTACCGT...CAGCTCAGAGGGAAGTTTTGAGGGTCCCTCCAGACCAGGTACCAAAGAGGACAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000163782.8 |
||
| CDS-3UTR TCA 90 bp | GTGGCAGGCTGCATTCCCATGAGGAGAGGCCTAAGGGTTCATGAGGAAGAGTACTTTGCTCTCTTAGCTTaGACATTGTCCTCTTTGGTA | + |
|
Preference number: 4 (lower is better) Translates to: VAGCIPMRRGLRVHEEEYFALLA*TLSSLV Trigger: TACCAAAGAGGACAATGTTCAAGCTAAGAGAGCAAA...GTACTCTTCCTCATGAACCCTTAGGCCTCTCCTCATGGGAATGCAGCCTGCCAC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000047846.13 ENSMUST00000169143.8 |
||
| 3UTR CAA 72 bp | GTGTTGAAGAACAAGCCCTTGGGTGTCATAGGAGTGTaGGTGTATGTCACTGGTCTCTTCCTGATCACTGTC | + |
|
Preference number: 4 (lower is better) Translates to: VLKNKPLGVIGV*VYVTGLFLITV Trigger: GACAGTGATCAGGAAGAGACCAGTGACATACACCAACACTCCTATGACACCCAAGGGCTTGTTCTTCAACAC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000163782.8 |
||
| 3UTR CAA 72 bp | TCAGGATCCGCCAGTACCAGAGACAATGACAGCTTCTaGTCCACATTAATAGTGGGTCCTTGGCTATCAGAG | + |
|
Preference number: 4 (lower is better) Translates to: SGSASTRDNDSF*STLIVGPWLSE Trigger: CTCTGATAGCCAAGGACCCACTATTAATGTGGACAAGAAGCTGTCATTGTCTCTGGTACTGGCGGATCCTGA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000163782.8 |
||
| CDS-3UTR GCA 90 bp | CTGTCAACTGAGCAAGGTGACTATTTAATCCCAGCACTCGGAACTGGGGCATGTGAACCCATCTGCTACTaGCATGGCTTTTGTCAAAGA | + |
|
Preference number: 4 (lower is better) Translates to: LSTEQGDYLIPALGTGACEPICY*HGFCQR Trigger: TCTTTGACAAAAGCCATGGCAGTAGCAGATGGGTTC...ACATGCCCCAGTTCCGAGTGCTGGGATTAAATAGTCACCTTGCTCAGTTGACAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000069861.4 |
||
| CDS-3UTR GCA 90 bp | GCTTTGCAGGATGAAGTTGCCCCAGATGTACAACATGTTGTTCAATGTGTTGAAAACAAGGCTCTGTGCTaGGCATTGGAGCAGCCTCCA | + |
|
Preference number: 4 (lower is better) Translates to: ALQDEVAPDVQHVVQCVENKALC*ALEQPP Trigger: TGGAGGCTGCTCCAATGCGCAGCACAGAGCCTTGTT...TTCAACACATTGAACAACATGTTGTACATCTGGGGCAACTTCATCCTGCAAAGC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000163782.8 |
||
| 3UTR CAA 72 bp | CTTTGCAGGATGAAGTTGCCCCAGATGTACAACATGTaGTTCAATGTGTTGAAGAACAAGCCCTTGGGTGTC | + |
|
Preference number: 4 (lower is better) Translates to: LCRMKLPQMYNM*FNVLKNKPLGV Trigger: GACACCCAAGGGCTTGTTCTTCAACACATTGAACAACATGTTGTACATCTGGGGCAACTTCATCCTGCAAAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000069861.4 ENSMUST00000163782.8 |
||
| 3UTR CAA 72 bp | ACAGCCATTTGTCCTTTGAAAGAGTTGACCATGTATTaGATGGTGGACTCCTTGGGGAAGTCCGCCAGAAAA | + |
|
Preference number: 4 (lower is better) Translates to: TAICPLKELTMY*MVDSLGKSARK Trigger: TTTTCTGGCGGACTTCCCCAAGGAGTCCACCATCAAATACATGGTCAACTCTTTCAAAGGACAAATGGCTGT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000163782.8 |
||
| CDS-3UTR GCA 90 bp | AAGTGTCTGTACCCACTGAGCCACCTTGCTGACATAGAATATCAAAATGCAAGTCCGCAGTACCCAGAATaGCCAAAGGTTTGGTTTTCT | + |
|
Preference number: 4 (lower is better) Translates to: KCLYPLSHLADIEYQNASPQYPE*PKVWFS Trigger: AGAAAACCAAACCTTTGGGCATTCTGGGTACTGCGG...ACTTGCATTTTGATATTCTATGTCAGCAAGGTGGCTCAGTGGGTACAGACACTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000069861.4 |
||
| 3UTR CAA 72 bp | GCTTTTGGGAGTCTTCCTCTTTCTACCATTCGGGTCTaGAGAATTGAGCTTAGGTTATCACTTTTGGTGGCA | + |
|
Preference number: 4 (lower is better) Translates to: AFGSLPLSTIRV*RIELRLSLLVA Trigger: TGCCACCAAAAGTGATAACCTAAGCTCAATTCTCAAGACCCGAATGGTAGAAAGAGGAAGACTCCCAAAAGC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000069861.4 |
||
| 3UTR CAA 72 bp | AAGTTGCCCCAGATGTACAACATGTTGTTCAATGTGTaGAAGAACAAGCCCTTGGGTGTCATAGGAGTGTTG | + |
|
Preference number: 4 (lower is better) Translates to: KLPQMYNMLFNV*KNKPLGVIGVL Trigger: CAACACTCCTATGACACCCAAGGGCTTGTTCTTCAACACATTGAACAACATGTTGTACATCTGGGGCAACTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000069861.4 ENSMUST00000163782.8 |
||
| CDS-3UTR GCA 90 bp | GGAGCATCTCTTTTTATCTATGACTTTAATCTTGGTGAGCAGAGTGTTGCGATTGGACACGAACCCATCTaGTACTGCCATGGCTTTTGT | + |
|
Preference number: 4 (lower is better) Translates to: GASLFIYDFNLGEQSVAIGHEPI*YCHGFC Trigger: ACAAAAGCCATGGCAGTAGCAGATGGGTTCGTGTCC...AATCGCAACACTCTGCTCACCAAGATTAAAGTCATAGATAAAAAGAGATGCTCC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000164653.8 |
||
| 3UTR CAA 72 bp | TACAACATGTTGTTCAATGTGTTGAAGAACAAGCCCTaGGGTGTCATAGGAGTGTTGGTGTATGTCACTGGT | + |
|
Preference number: 4 (lower is better) Translates to: YNMLFNVLKNKP*GVIGVLVYVTG Trigger: ACCAGTGACATACACCAACACTCCTATGACACCCAAGGGCTTGTTCTTCAACACATTGAACAACATGTTGTA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000163782.8 |
||
| 3UTR CAA 72 bp | GTCCGCCAGAAAAATGAATTCTTCCCTATTGTAGCTTaGCAGGATGAAGTTGCCCCAGATGTACAACATGTT | + |
|
Preference number: 4 (lower is better) Translates to: VRQKNEFFPIVA*QDEVAPDVQHV Trigger: AACATGTTGTACATCTGGGGCAACTTCATCCTGCAAAGCTACAATAGGGAAGAATTCATTTTTCTGGCGGAC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000163782.8 |
||
| 3UTR CAA 72 bp | TTGAAAGAGTTGACCATGTATTTGATGGTGGACTCCTaGGGGAAGTCCGCCAGAAAAATGAATTCTTCCCTA | + |
|
Preference number: 4 (lower is better) Translates to: LKELTMYLMVDS*GKSARKMNSSL Trigger: TAGGGAAGAATTCATTTTTCTGGCGGACTTCCCCAAGGAGTCCACCATCAAATACATGGTCAACTCTTTCAA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000163782.8 |
||
| 3UTR CAA 72 bp | AATGCAAGTATGTGTATACACACACTGGATGTCCACTaGGGGATTCCTCCACTATTGTCGTTTTTGAAACAG | + |
|
Preference number: 4 (lower is better) Translates to: NASMCIHTLDVH*GIPPLLSFLKQ Trigger: CTGTTTCAAAAACGACAATAGTGGAGGAATCCCCAAGTGGACATCCAGTGTGTGTATACACATACTTGCATT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000069861.4 |
||
| 3UTR CAA 72 bp | TACAACATGTTGTTCAATGTGTTGAAGAACAAGCCCTaGGGTGTCATAGGAGTGTTGGTGTATGTCACTGTA | + |
|
Preference number: 4 (lower is better) Translates to: YNMLFNVLKNKP*GVIGVLVYVTV Trigger: TACAGTGACATACACCAACACTCCTATGACACCCAAGGGCTTGTTCTTCAACACATTGAACAACATGTTGTA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000069861.4 |
||
| 3UTR CAA 72 bp | TGTTCGGAGCATCTCTTTTTATCTATGACTTTAATCTaGGTGAGCAGAGTGTTGCGATTAAGAAGGAACTCC | + |
|
Preference number: 4 (lower is better) Translates to: CSEHLFLSMTLI*VSRVLRLRRNS Trigger: GGAGTTCCTTCTTAATCGCAACACTCTGCTCACCAAGATTAAAGTCATAGATAAAAAGAGATGCTCCGAACA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000163782.8 ENSMUST00000164653.8 |
||
| CDS-3UTR CAA 90 bp | GAGGTGGCAGGCTGCATTCCCATGAGGAGAGGCCTAAGGGTTCATGAGGAAGAGATGAAGGAGGACCGCTaGCTGCTGAGCGGTAGCCCA | + |
|
Preference number: 5 (lower is better) Translates to: EVAGCIPMRRGLRVHEEEMKEDR*LLSGSP Trigger: TGGGCTACCGCTCAGCAGCAAGCGGTCCTCCTTCAT...CTCTTCCTCATGAACCCTTAGGCCTCTCCTCATGGGAATGCAGCCTGCCACCTC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000047846.13 ENSMUST00000169143.8 |
||
| CDS-3UTR CAA 90 bp | GTGGCAGGCTGCATTCCCATGAGGAGAGGCCTAAGGGTTCATGAGGAAGAGTACGTAGGTGCGCCAGCCTaGGGAAGGGACCACCTGGTA | + |
|
Preference number: 5 (lower is better) Translates to: VAGCIPMRRGLRVHEEEYVGAPA*GRDHLV Trigger: TACCAGGTGGTCCCTTCCCAAGGCTGGCGCACCTAC...GTACTCTTCCTCATGAACCCTTAGGCCTCTCCTCATGGGAATGCAGCCTGCCAC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000169143.8 |
||
| CDS-3UTR CAA 90 bp | GTGGCAGGCTGCATTCCCATGAGGAGAGGCCTAAGGGTTCATGAGGAAGAGTACACCGGGCACAGTCTCTaGATGCACTCGCTAGGCAGG | + |
|
Preference number: 5 (lower is better) Translates to: VAGCIPMRRGLRVHEEEYTGHSL*MHSLGR Trigger: CCTGCCTAGCGAGTGCATCAAGAGACTGTGCCCGGT...GTACTCTTCCTCATGAACCCTTAGGCCTCTCCTCATGGGAATGCAGCCTGCCAC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000047846.13 ENSMUST00000169143.8 |
||
| CDS CCA 90 bp | CAGGATGCACATGGCCTCTGCCGGGCAGTACCCTGTGCTGCGCATTaGAGCAGCCTCCATCAGAATCTGCAAATTTTCCATCTCCCAACG | + |
|
Preference number: 5 (lower is better) Translates to: QDAHGLCRAVPCAAH*SSLHQNLQIFHLPT Trigger: CGTTGGGAGATGGAAAATTTGCAGATTCTGATGGAGGCTGCTCCAATGCGCAGCACAGGGTACTGCCCGGCAGAGGCCATGTGCATCCTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000047846.13 ENSMUST00000169143.8 |
||
| CDS-3UTR CAA 90 bp | GTGTTGCCACCAGCGCCAGGTGGGATCGTGCACTGGGTCTGCATAGGGCTTATCACGTACTCAGAACCATaGCCACTGAAATACACCGGG | + |
|
Preference number: 5 (lower is better) Translates to: VLPPAPGGIVHWVCIGLITYSEP*PLKYTG Trigger: CCCGGTGTATTTCAGTGGCAATGGTTCTGAGTACGT...GATAAGCCCTATGCAGACCCAGTGCACGATCCCACCTGGCGCTGGTGGCAACAC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000164653.8 |
||
| CDS-3UTR CAA 90 bp | GAGGTGGCAGGCTGCATTCCCATGAGGAGAGGCCTAAGGGTTCATGAGGAAGAGTTGATGGTGGACTCCTaGGGGAAGTCCGCCAGAAAA | + |
|
Preference number: 5 (lower is better) Translates to: EVAGCIPMRRGLRVHEEELMVDS*GKSARK Trigger: TTTTCTGGCGGACTTCCCCAAGGAGTCCACCATCAA...CTCTTCCTCATGAACCCTTAGGCCTCTCCTCATGGGAATGCAGCCTGCCACCTC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000047846.13 ENSMUST00000169143.8 |
||
| CDS-3UTR CAA 90 bp | GAGGTGGCAGGCTGCATTCCCATGAGGAGAGGCCTAAGGGTTCATGAGGAAGAGGGAGCGCCCAAGACCTaGATCAACATGGAAGTCTTC | + |
|
Preference number: 5 (lower is better) Translates to: EVAGCIPMRRGLRVHEEEGAPKT*INMEVF Trigger: GAAGACTTCCATGTTGATCAAGGTCTTGGGCGCTCC...CTCTTCCTCATGAACCCTTAGGCCTCTCCTCATGGGAATGCAGCCTGCCACCTC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000047846.13 ENSMUST00000169143.8 |
||
| CDS-3UTR CAA 90 bp | CAGGGGAGAGGAGAAGAGTGCTCACCTGGTCTCTTCCTGATCACTGTCCACCCTACGTACTCAGAACCATaGCCACTGAAATACACCGGG | + |
|
Preference number: 5 (lower is better) Translates to: QGRGEECSPGLFLITVHPTYSEP*PLKYTG Trigger: CCCGGTGTATTTCAGTGGCAATGGTTCTGAGTACGT...AGGGTGGACAGTGATCAGGAAGAGACCAGGTGAGCACTCTTCTCCTCTCCCCTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000069861.4 |
||
| CDS-3UTR CAA 90 bp | GAGGTGGCAGGCTGCATTCCCATGAGGAGAGGCCTAAGGGTTCATGAGGAAGAGACGTACTCAGAACCATaGCCACTGAAATACACCGGG | + |
|
Preference number: 5 (lower is better) Translates to: EVAGCIPMRRGLRVHEEETYSEP*PLKYTG Trigger: CCCGGTGTATTTCAGTGGCAATGGTTCTGAGTACGT...CTCTTCCTCATGAACCCTTAGGCCTCTCCTCATGGGAATGCAGCCTGCCACCTC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000047846.13 ENSMUST00000169143.8 |
||
| CDS-3UTR CAA 90 bp | ACCTACCTTGTCCTTTGTTTTGTGTTGCCACCAGCGCCAGGTGGGATCGTGCACTTGATGGTGGACTCCTaGGGGAAGTCCGCCAGAAAA | + |
|
Preference number: 5 (lower is better) Translates to: TYLVLCFVLPPAPGGIVHLMVDS*GKSARK Trigger: TTTTCTGGCGGACTTCCCCAAGGAGTCCACCATCAA...GTGCACGATCCCACCTGGCGCTGGTGGCAACACAAAACAAAGGACAAGGTAGGT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000164653.8 |
||
| CDS-3UTR CAA 90 bp | GTGGCAGGCTGCATTCCCATGAGGAGAGGCCTAAGGGTTCATGAGGAAGAGTACGGAGCGCCCAAGACCTaGATCAACATGGAAGTCTTC | + |
|
Preference number: 5 (lower is better) Translates to: VAGCIPMRRGLRVHEEEYGAPKT*INMEVF Trigger: GAAGACTTCCATGTTGATCAAGGTCTTGGGCGCTCC...GTACTCTTCCTCATGAACCCTTAGGCCTCTCCTCATGGGAATGCAGCCTGCCAC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000047846.13 ENSMUST00000169143.8 |
||
| CDS-3UTR CAA 90 bp | GTGGCAGGCTGCATTCCCATGAGGAGAGGCCTAAGGGTTCATGAGGAAGAGTACACGTACTCAGAACCATaGCCACTGAAATACACCGGG | + |
|
Preference number: 5 (lower is better) Translates to: VAGCIPMRRGLRVHEEEYTYSEP*PLKYTG Trigger: CCCGGTGTATTTCAGTGGCAATGGTTCTGAGTACGT...GTACTCTTCCTCATGAACCCTTAGGCCTCTCCTCATGGGAATGCAGCCTGCCAC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000047846.13 ENSMUST00000169143.8 |
||
| CDS-3UTR CAA 90 bp | GAGGTGGCAGGCTGCATTCCCATGAGGAGAGGCCTAAGGGTTCATGAGGAAGAGGTGAACCAGTTGCCCTaGTCTAGGAAGAAAAGATCG | + |
|
Preference number: 5 (lower is better) Translates to: EVAGCIPMRRGLRVHEEEVNQLP*SRKKRS Trigger: CGATCTTTTCTTCCTAGACAAGGGCAACTGGTTCAC...CTCTTCCTCATGAACCCTTAGGCCTCTCCTCATGGGAATGCAGCCTGCCACCTC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000047846.13 ENSMUST00000169143.8 |
||
| CDS-3UTR CAA 90 bp | GTGGCAGGCTGCATTCCCATGAGGAGAGGCCTAAGGGTTCATGAGGAAGAGTACAGGTGGGTAGATGCTTaGGGGGATGATGTCATAGCA | + |
|
Preference number: 5 (lower is better) Translates to: VAGCIPMRRGLRVHEEEYRWVDA*GDDVIA Trigger: TGCTATGACATCATCCCCCAAAGCATCTACCCACCT...GTACTCTTCCTCATGAACCCTTAGGCCTCTCCTCATGGGAATGCAGCCTGCCAC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000047846.13 ENSMUST00000169143.8 |
||
| CDS-3UTR CAA 90 bp | CGGGCTGTTGTAACGGAAGATTTCTTCCTCCGTGTAGTCTCTGATGGTGTTCAGGCTCTGTGCTGCGCATaGGAGCAGCCTCCATCAGAA | + |
|
Preference number: 5 (lower is better) Translates to: RAVVTEDFFLRVVSDGVQALCCA*EQPPSE Trigger: TTCTGATGGAGGCTGCTCCAATGCGCAGCACAGAGC...CTGAACACCATCAGAGACTACACGGAGGAAGAAATCTTCCGTTACAACAGCCCG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000163782.8 |
||
| CDS-3UTR CAA 90 bp | GAGGTGGCAGGCTGCATTCCCATGAGGAGAGGCCTAAGGGTTCATGAGGAAGAGTTAAAAGGGCACGTGTaGGTGAAGGTGATCATCTTG | + |
|
Preference number: 5 (lower is better) Translates to: EVAGCIPMRRGLRVHEEELKGHV*VKVIIL Trigger: CAAGATGATCACCTTCACCAACACGTGCCCTTTTAA...CTCTTCCTCATGAACCCTTAGGCCTCTCCTCATGGGAATGCAGCCTGCCACCTC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000047846.13 ENSMUST00000169143.8 |
||
| CDS-3UTR CAA 90 bp | GTGGCAGGCTGCATTCCCATGAGGAGAGGCCTAAGGGTTCATGAGGAAGAGTACGTGAAGGTGAACCAGTaGCCCTTGTCTAGGAAGAAA | + |
|
Preference number: 5 (lower is better) Translates to: VAGCIPMRRGLRVHEEEYVKVNQ*PLSRKK Trigger: TTTCTTCCTAGACAAGGGCAACTGGTTCACCTTCAC...GTACTCTTCCTCATGAACCCTTAGGCCTCTCCTCATGGGAATGCAGCCTGCCAC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000047846.13 ENSMUST00000169143.8 |
||
| CDS GCA 90 bp | GATGCAAGCCTACCTTCTCGAACTTGTTCAGGACAAGAAGCCAGGTaGAATGCTGTAAGGTATCTTCCGCCCACGACTTCAACGACAGCA | + |
|
Preference number: 5 (lower is better) Translates to: DASLPSRTCSGQEAR*NAVRYLPPTTSTTA Trigger: TGCTGTCGTTGAAGTCGTGGGCGGAAGATACCTTACAGCATTGCACCTGGCTTCTTGTCCTGAACAAGTTCGAGAAGGTAGGCTTGCATC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000047846.13 ENSMUST00000164653.8 ENSMUST00000169143.8 |
||
| CDS-3UTR CAA 90 bp | GTGGCAGGCTGCATTCCCATGAGGAGAGGCCTAAGGGTTCATGAGGAAGAGTACTTAAAAGGGCACGTGTaGGTGAAGGTGATCATCTTG | + |
|
Preference number: 5 (lower is better) Translates to: VAGCIPMRRGLRVHEEEYLKGHV*VKVIIL Trigger: CAAGATGATCACCTTCACCAACACGTGCCCTTTTAA...GTACTCTTCCTCATGAACCCTTAGGCCTCTCCTCATGGGAATGCAGCCTGCCAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000047846.13 ENSMUST00000169143.8 |
||
| CDS-3UTR CAA 90 bp | GAGGTGGCAGGCTGCATTCCCATGAGGAGAGGCCTAAGGGTTCATGAGGAAGAGCTTTGCTCTCTTAGCTaGAACATTGTCCTCTTTGGT | + |
|
Preference number: 5 (lower is better) Translates to: EVAGCIPMRRGLRVHEEELCSLS*NIVLFG Trigger: ACCAAAGAGGACAATGTTCAAGCTAAGAGAGCAAAG...CTCTTCCTCATGAACCCTTAGGCCTCTCCTCATGGGAATGCAGCCTGCCACCTC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000047846.13 ENSMUST00000169143.8 |
||
| CDS GCA 90 bp | AAGCCTACCTTCTCGAACTTGTTCAGGACAAGAAGCCAGGTGCAATaGTGTAAGGTATCTTCCGCCCACGACTTCAACGACAGCAATAGC | + |
|
Preference number: 5 (lower is better) Translates to: KPTFSNLFRTRSQVQ*CKVSSAHDFNDSNS Trigger: GCTATTGCTGTCGTTGAAGTCGTGGGCGGAAGATACCTTACAGCATTGCACCTGGCTTCTTGTCCTGAACAAGTTCGAGAAGGTAGGCTT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000047846.13 ENSMUST00000164653.8 ENSMUST00000169143.8 |
||
| CDS CCA 90 bp | AGAAGTAATCCTTGTCCTTTGTTTTGTGTTGCCACCAGCGCCAGGTaGGATCGTGCACTGGGTCTGCATAGGGCTTATCATACTTGGAGT | + |
|
Preference number: 5 (lower is better) Translates to: RSNPCPLFCVATSAR*DRALGLHRAYHTWS Trigger: ACTCCAAGTATGATAAGCCCTATGCAGACCCAGTGCACGATCCCACCTGGCGCTGGTGGCAACACAAAACAAAGGACAAGGATTACTTCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000047846.13 ENSMUST00000169143.8 |
||
| CDS-3UTR CAA 90 bp | GTGGCAGGCTGCATTCCCATGAGGAGAGGCCTAAGGGTTCATGAGGAAGAGTACGACAATGACAGCTTCTaGTCCACATTAATAGTGGGT | + |
|
Preference number: 5 (lower is better) Translates to: VAGCIPMRRGLRVHEEEYDNDSF*STLIVG Trigger: ACCCACTATTAATGTGGACAAGAAGCTGTCATTGTC...GTACTCTTCCTCATGAACCCTTAGGCCTCTCCTCATGGGAATGCAGCCTGCCAC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000047846.13 ENSMUST00000169143.8 |
||
| CDS-3UTR CAA 90 bp | GTGGCAGGCTGCATTCCCATGAGGAGAGGCCTAAGGGTTCATGAGGAAGAGTACCTTTGCTCTCTTAGCTaGAACATTGTCCTCTTTGGT | + |
|
Preference number: 5 (lower is better) Translates to: VAGCIPMRRGLRVHEEEYLCSLS*NIVLFG Trigger: ACCAAAGAGGACAATGTTCAAGCTAAGAGAGCAAAG...GTACTCTTCCTCATGAACCCTTAGGCCTCTCCTCATGGGAATGCAGCCTGCCAC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000047846.13 ENSMUST00000169143.8 |
||
| CDS-3UTR CAA 90 bp | GAGGTGGCAGGCTGCATTCCCATGAGGAGAGGCCTAAGGGTTCATGAGGAAGAGACAGGAAAAGTTGATTaGCAAGTAGTAAGGAAAGCT | + |
|
Preference number: 5 (lower is better) Translates to: EVAGCIPMRRGLRVHEEETGKVD*QVVRKA Trigger: AGCTTTCCTTACTACTTGCAAATCAACTTTTCCTGT...CTCTTCCTCATGAACCCTTAGGCCTCTCCTCATGGGAATGCAGCCTGCCACCTC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000047846.13 ENSMUST00000163782.8 ENSMUST00000169143.8 |
||
| CDS-3UTR CAA 90 bp | ACCACAGTGAAGGTGAACCAGTTGCCCTTGTCTAGGAAGAAAAGATCGGGTATTTTAAAAGGGCACGTGTaGGTGAAGGTGATCATCTTG | + |
|
Preference number: 5 (lower is better) Translates to: TTVKVNQLPLSRKKRSGILKGHV*VKVIIL Trigger: CAAGATGATCACCTTCACCAACACGTGCCCTTTTAA...AATACCCGATCTTTTCTTCCTAGACAAGGGCAACTGGTTCACCTTCACTGTGGT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000164653.8 |
||
| CDS-3UTR CAA 90 bp | ACCACAGTGAAGGTGAACCAGTTGCCCTTGTCTAGGAAGAAAAGATCGGGTATTACAGGAAAAGTTGATTaGCAAGTAGTAAGGAAAGCT | + |
|
Preference number: 5 (lower is better) Translates to: TTVKVNQLPLSRKKRSGITGKVD*QVVRKA Trigger: AGCTTTCCTTACTACTTGCAAATCAACTTTTCCTGT...AATACCCGATCTTTTCTTCCTAGACAAGGGCAACTGGTTCACCTTCACTGTGGT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000163782.8 ENSMUST00000164653.8 |
||
| CDS-3UTR CAA 90 bp | ACCTACCTTTGCAGGATGAAGTTGCCCCAGATGTACAACATGTTGTTCAATGTGACAGGAAAAGTTGATTaGCAAGTAGTAAGGAAAGCT | + |
|
Preference number: 5 (lower is better) Translates to: TYLCRMKLPQMYNMLFNVTGKVD*QVVRKA Trigger: AGCTTTCCTTACTACTTGCAAATCAACTTTTCCTGT...CACATTGAACAACATGTTGTACATCTGGGGCAACTTCATCCTGCAAAGGTAGGT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000069861.4 |
||
| CDS-3UTR CAA 90 bp | TCTATGACTTTAATCTTGGTGAGCAGAGTGTTGCGATTAAGAAGGAACTCCCGAACAGGAAAAGTTGATTaGCAAGTAGTAAGGAAAGCT | + |
|
Preference number: 5 (lower is better) Translates to: SMTLILVSRVLRLRRNSRTGKVD*QVVRKA Trigger: AGCTTTCCTTACTACTTGCAAATCAACTTTTCCTGT...TCGGGAGTTCCTTCTTAATCGCAACACTCTGCTCACCAAGATTAAAGTCATAGA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000163782.8 ENSMUST00000164653.8 |
||
| CDS CAA 90 bp | TCAGGATGCACATGGCCTCTGCCGGGCAGTACCCTGTGCTGCGCATaGGAGCAGCCTCCATCAGAATCTGCAAATTTTCCATCTCCCAAC | + |
|
Preference number: 6 (lower is better) Translates to: SGCTWPLPGSTLCCA*EQPPSESANFPSPN Trigger: GTTGGGAGATGGAAAATTTGCAGATTCTGATGGAGGCTGCTCCAATGCGCAGCACAGGGTACTGCCCGGCAGAGGCCATGTGCATCCTGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000047846.13 ENSMUST00000169143.8 |
||
| CDS CCA 72 bp | CATGGCCTCTGCCGGGCAGTACCCTGTGCTGCGCATTaGAGCAGCCTCCATCAGAATCTGCAAATTTTCCAT | + |
|
Preference number: 6 (lower is better) Translates to: HGLCRAVPCAAH*SSLHQNLQIFH Trigger: ATGGAAAATTTGCAGATTCTGATGGAGGCTGCTCCAATGCGCAGCACAGGGTACTGCCCGGCAGAGGCCATG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000047846.13 ENSMUST00000169143.8 |
||
| CDS CAA 72 bp | ACATGGCCTCTGCCGGGCAGTACCCTGTGCTGCGCATaGGAGCAGCCTCCATCAGAATCTGCAAATTTTCCA | + |
|
Preference number: 6 (lower is better) Translates to: TWPLPGSTLCCA*EQPPSESANFP Trigger: TGGAAAATTTGCAGATTCTGATGGAGGCTGCTCCAATGCGCAGCACAGGGTACTGCCCGGCAGAGGCCATGT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000047846.13 ENSMUST00000169143.8 |
||
| CDS CAA 72 bp | TTGCATCTTCTGCAGTTTAAGGTAGGTGCGCCAGCCTaGGGAAGGGACCACCTGGTATACATCATAGCCACC | + |
|
Preference number: 6 (lower is better) Translates to: LHLLQFKVGAPA*GRDHLVYIIAT Trigger: GGTGGCTATGATGTATACCAGGTGGTCCCTTCCCAAGGCTGGCGCACCTACCTTAAACTGCAGAAGATGCAA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000169143.8 |
||
| CDS CAA 90 bp | GAAGAGGGAGACCAAGGACTCATTTGTAGAATACAGGGGAGACTTTaGCATCTTCTGCAGTTTAAGGTAGGTGCGCCAGCCTTGGGAAGG | + |
|
Preference number: 6 (lower is better) Translates to: EEGDQGLICRIQGRL*HLLQFKVGAPALGR Trigger: CCTTCCCAAGGCTGGCGCACCTACCTTAAACTGCAGAAGATGCAAAAGTCTCCCCTGTATTCTACAAATGAGTCCTTGGTCTCCCTCTTC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000169143.8 |
||
| CDS GCA 72 bp | CTACCTTCTCGAACTTGTTCAGGACAAGAAGCCAGGTaGAATGCTGTAAGGTATCTTCCGCCCACGACTTCA | + |
|
Preference number: 6 (lower is better) Translates to: LPSRTCSGQEAR*NAVRYLPPTTS Trigger: TGAAGTCGTGGGCGGAAGATACCTTACAGCATTGCACCTGGCTTCTTGTCCTGAACAAGTTCGAGAAGGTAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000047846.13 ENSMUST00000164653.8 ENSMUST00000169143.8 |
||
| CDS CAA 72 bp | CGATCCTTGGAGAGATGCAAGCCTACCTTCTCGAACTaGTTCAGGACAAGAAGCCAGGTGCAATGCTGTAAG | + |
|
Preference number: 6 (lower is better) Translates to: RSLERCKPTFSN*FRTRSQVQCCK Trigger: CTTACAGCATTGCACCTGGCTTCTTGTCCTGAACAAGTTCGAGAAGGTAGGCTTGCATCTCTCCAAGGATCG 50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000047846.13 ENSMUST00000164653.8 ENSMUST00000169143.8 |
||
| CDS CAA 72 bp | GCACGTGTTGGTGAAGGTGATCATCTTGTAGTTCCCTaGGTTCACCACTGTGAAGGGTTTGGGCAGGTTGTA | + |
|
Preference number: 6 (lower is better) Translates to: ARVGEGDHLVVP*VHHCEGFGQVV Trigger: TACAACCTGCCCAAACCCTTCACAGTGGTGAACCAAGGGAACTACAAGATGATCACCTTCACCAACACGTGC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000047846.13 ENSMUST00000169143.8 |
||
| CDS GCA 72 bp | AGTTCTTCTCGAACTTGTTCAGGACAAGAAGCCAGGTaGAATGCTGTAAGGTATCTTCCGCCCACGACTTCA | + |
|
Preference number: 6 (lower is better) Translates to: SSSRTCSGQEAR*NAVRYLPPTTS Trigger: TGAAGTCGTGGGCGGAAGATACCTTACAGCATTGCACCTGGCTTCTTGTCCTGAACAAGTTCGAGAAGAACT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000069861.4 |
||
| CDS CCA 72 bp | GATCGATTGGCGAGTCTGTCAACTTTTGGAACACCTTaGCCACTGTATCGATGGGCTCATGATCTTGAAATC | + |
|
Preference number: 6 (lower is better) Translates to: DRLASLSTFGTP*PLYRWAHDLEI Trigger: GATTTCAAGATCATGAGCCCATCGATACAGTGGCCAAGGTGTTCCAAAAGTTGACAGACTCGCCAATCGATC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000047846.13 ENSMUST00000164653.8 ENSMUST00000169143.8 |
||
| CDS CAA 90 bp | AGCTCTTCATTTTCTGTGACAACAGCCATTTGTCCTTTGAAAGAGTaGACCATGTATTTGATGGTGGACTCCTTGGGGAAGTCCGCCAGA | + |
|
Preference number: 6 (lower is better) Translates to: SSSFSVTTAICPLKE*TMYLMVDSLGKSAR Trigger: TCTGGCGGACTTCCCCAAGGAGTCCACCATCAAATACATGGTCAACTCTTTCAAAGGACAAATGGCTGTTGTCACAGAAAATGAAGAGCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000047846.13 |
||
| CDS CAA 90 bp | TCCTCTTCATTTTCTGTGACAACAGCCATTTGTCCTTTGAAAGAGTaGACCATGTATTTGATGGTGGACTCCTTGGGGAAGTCCGCCAGA | + |
|
Preference number: 6 (lower is better) Translates to: SSSFSVTTAICPLKE*TMYLMVDSLGKSAR Trigger: TCTGGCGGACTTCCCCAAGGAGTCCACCATCAAATACATGGTCAACTCTTTCAAAGGACAAATGGCTGTTGTCACAGAAAATGAAGAGGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000164653.8 |
||
| CDS CAA 90 bp | ATCTCTTCATTTTCTGTGACAACAGCCATTTGTCCTTTGAAAGAGTaGACCATGTATTTGATGGTGGACTCCTTGGGGAAGTCCGCCAGA | + |
|
Preference number: 6 (lower is better) Translates to: ISSFSVTTAICPLKE*TMYLMVDSLGKSAR Trigger: TCTGGCGGACTTCCCCAAGGAGTCCACCATCAAATACATGGTCAACTCTTTCAAAGGACAAATGGCTGTTGTCACAGAAAATGAAGAGAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000169143.8 |
||
| CDS CAA 90 bp | CCAGCAACTGTCAATACTCAGCTGTCCCGGACAGGAAAAGTTGATTaGCAAGTAGTAAGGAAAGCTCAAATAGTTCTTCTCGAACTTGTT | + |
|
Preference number: 6 (lower is better) Translates to: PATVNTQLSRTGKVD*QVVRKAQIVLLELV Trigger: AACAAGTTCGAGAAGAACTATTTGAGCTTTCCTTACTACTTGCAAATCAACTTTTCCTGTCCGGGACAGCTGAGTATTGACAGTTGCTGG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000069861.4 |
||
| CDS CAA 90 bp | AAGTACCAGATCTCTTCATTTTCTGTGACAACAGCCATTTGTCCTTaGAAAGAGTTGACCATGTATTTGATGGTGGACTCCTTGGGGAAG | + |
|
Preference number: 6 (lower is better) Translates to: KYQISSFSVTTAICP*KELTMYLMVDSLGK Trigger: CTTCCCCAAGGAGTCCACCATCAAATACATGGTCAACTCTTTCAAAGGACAAATGGCTGTTGTCACAGAAAATGAAGAGATCTGGTACTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000169143.8 |
||
| CDS CAA 90 bp | TCTTGTAGTTCCTCTTCATTTTCTGTGACAACAGCCATTTGTCCTTaGAAAGAGTTGACCATGTATTTGATGGTGGACTCCTTGGGGAAG | + |
|
Preference number: 6 (lower is better) Translates to: SCSSSSFSVTTAICP*KELTMYLMVDSLGK Trigger: CTTCCCCAAGGAGTCCACCATCAAATACATGGTCAACTCTTTCAAAGGACAAATGGCTGTTGTCACAGAAAATGAAGAGGAACTACAAGA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000164653.8 |
||
| CDS CAA 72 bp | GTCAATACTCAGCTGTCCCGGACAGGAAAAGTTGATTaGCAAGTAGTAAGGAAAGCTCAAATAGTTCTTCTC | + |
|
Preference number: 6 (lower is better) Translates to: VNTQLSRTGKVD*QVVRKAQIVLL Trigger: GAGAAGAACTATTTGAGCTTTCCTTACTACTTGCAAATCAACTTTTCCTGTCCGGGACAGCTGAGTATTGAC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000069861.4 |
||