Pregenerated sensors for CATSPERE1 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000102483Ensembl transcript IDs: ENSMUST00000194528.3
Found 50 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS TCA 90 bp | AAAAATGGAATAGTCTTGGCTATTTATGTAGTACCTCCACAGAGCTaGGACACAGCAGCTCAGCCACAACAGCAGCGCCGCCACCACCTG | + |
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Preference number: 5 (lower is better) Translates to: KNGIVLAIYVVPPQS*DTAAQPQQQRRHHL Trigger: CAGGTGGTGGCGGCGCTGCTGTTGTGGCTGAGCTGCTGTGTCTCAGCTCTGTGGAGGTACTACATAAATAGCCAAGACTATTCCATTTTT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000194528.3 |
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| CDS GCA 90 bp | GTACAGACAGAGCAGTGGGACAGAAGAACTGCAGCCTCCAGTGGGTaGCATAAATACTCAACAGACATTACTTCCAGCGTGTCAGTCTGG | + |
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Preference number: 5 (lower is better) Translates to: VQTEQWDRRTAASSG*HKYSTDITSSVSVW Trigger: CCAGACTGACACGCTGGAAGTAATGTCTGTTGAGTATTTATGGCACCCACTGGAGGCTGCAGTTCTTCTGTCCCACTGCTCTGTCTGTAC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000194528.3 |
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| CDS CCA 90 bp | ATCACTATGCGGATGTTCCTGGTGTTGGTGGTACAGACAGAGCAGTaGGACAGAAGAACTGCAGCCTCCAGTGGGTGCCATAAATACTCA | + |
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Preference number: 5 (lower is better) Translates to: ITMRMFLVLVVQTEQ*DRRTAASSGCHKYS Trigger: TGAGTATTTATGGCACCCACTGGAGGCTGCAGTTCTTCTGTCCCACTGCTCTGTCTGTACCACCAACACCAGGAACATCCGCATAGTGAT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000194528.3 |
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| CDS TCA 90 bp | GCATCACTCAGGATACCTGGAGGGGCTCTTACTCTGGTCCAGGTTTaGAAGGAATCATTTGTTTGGAAAGTCTCCTGGTCAGTGGCCAAG | + |
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Preference number: 5 (lower is better) Translates to: ASLRIPGGALTLVQV*KESFVWKVSWSVAK Trigger: CTTGGCCACTGACCAGGAGACTTTCCAAACAAATGATTCCTTTCAAACCTGGACCAGAGTAAGAGCCCCTCCAGGTATCCTGAGTGATGC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000194528.3 |
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| CDS CCA 90 bp | AGGCCTATAGTTCTGAGGCCCCCAGACATCATCCAGTGGGATGTCTaGGTTTTCCTCTATCATCGAGTCCCACGTCTGTGCTTCATTTAT | + |
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Preference number: 5 (lower is better) Translates to: RPIVLRPPDIIQWDV*VFLYHRVPRLCFIY Trigger: ATAAATGAAGCACAGACGTGGGACTCGATGATAGAGGAAAACCCAGACATCCCACTGGATGATGTCTGGGGGCCTCAGAACTATAGGCCT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000194528.3 |
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| CDS GCA 90 bp | AGTCCTGGAGTGTCCACGTTTGGAATATTGCACTATATATCACTATaGGGATGTTCCTGGTGTTGGTGGTACAGACAGAGCAGTGGGACA | + |
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Preference number: 5 (lower is better) Translates to: SPGVSTFGILHYISL*GCSWCWWYRQSSGT Trigger: TGTCCCACTGCTCTGTCTGTACCACCAACACCAGGAACATCCGCATAGTGATATATAGTGCAATATTCCAAACGTGGACACTCCAGGACT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000194528.3 |
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| CDS CCA 90 bp | TGTGCCTTTGAGCATCACTCAGGATACCTGGAGGGGCTCTTACTCTaGTCCAGGTTTGAAAGGAATCATTTGTTTGGAAAGTCTCCTGGT | + |
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Preference number: 5 (lower is better) Translates to: CAFEHHSGYLEGLLL*SRFERNHLFGKSPG Trigger: ACCAGGAGACTTTCCAAACAAATGATTCCTTTCAAACCTGGACCAGAGTAAGAGCCCCTCCAGGTATCCTGAGTGATGCTCAAAGGCACA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000194528.3 |
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| CDS TCA 90 bp | TTACCTCGTATCACTTTGGCTATATCATCTGAAGACATTGGCAGGTaGATGACCCAGGTTCCTTCTGAAGTTAAGGGACCTGGGTGGTAC | + |
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Preference number: 5 (lower is better) Translates to: LPRITLAISSEDIGR*MTQVPSEVKGPGWY Trigger: GTACCACCCAGGTCCCTTAACTTCAGAAGGAACCTGGGTCATTCACCTGCCAATGTCTTCAGATGATATAGCCAAAGTGATACGAGGTAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000194528.3 |
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| CDS GCA 90 bp | TTCTCAACTGTGAATATGAAAGGACGCTGTCCCAGGGTATTCATCTaGTTGGTTAGTACCCTGGAACTCAGTGAAGGTTTCTTTGCGGTC | + |
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Preference number: 5 (lower is better) Translates to: FSTVNMKGRCPRVFI*LVSTLELSEGFFAV Trigger: GACCGCAAAGAAACCTTCACTGAGTTCCAGGGTACTAACCAAGCAGATGAATACCCTGGGACAGCGTCCTTTCATATTCACAGTTGAGAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000194528.3 |
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| CDS TCA 90 bp | GGTAAACAGTACCGTCTACTAGAAACAGAGTTCCTTGGTCAAATATaGTCACGTCCCTCAGACTGTGCCTTTGAGCATCACTCAGGATAC | + |
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Preference number: 5 (lower is better) Translates to: GKQYRLLETEFLGQI*SRPSDCAFEHHSGY Trigger: GTATCCTGAGTGATGCTCAAAGGCACAGTCTGAGGGACGTGATCATATTTGACCAAGGAACTCTGTTTCTAGTAGACGGTACTGTTTACC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000194528.3 |
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| CDS TCA 90 bp | AGATGCCGTTCCACTTCTTGGTTTCCAGCAATTGGCTTTATTGTGTaGATTCCAGCCCTTTTGCAGTGTAGTGTTGTCTTGGGTGATGTA | + |
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Preference number: 5 (lower is better) Translates to: RCRSTSWFPAIGFIV*IPALLQCSVVLGDV Trigger: TACATCACCCAAGACAACACTACACTGCAAAAGGGCTGGAATTCACACAATAAAGCCAATTGCTGGAAACCAAGAAGTGGAACGGCATCT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000194528.3 |
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| CDS GCA 90 bp | CAGTGGGATGTCTGGGTTTTCCTCTATCATCGAGTCCCACGTCTGTaGTTCATTTATACAACCATTCTGCTCCATAGTAGAATTAAAGGT | + |
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Preference number: 5 (lower is better) Translates to: QWDVWVFLYHRVPRL*FIYTTILLHSRIKG Trigger: ACCTTTAATTCTACTATGGAGCAGAATGGTTGTATAAATGAAGCACAGACGTGGGACTCGATGATAGAGGAAAACCCAGACATCCCACTG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000194528.3 |
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| CDS GCA 90 bp | TTCAGAAATTATGGTCATGGGATATGTCAGCATGAAGTAGAGATTTaGAATGAAGCAGTCCTGGAAAGCCACTTTGTTACCTCGTATCAC | + |
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Preference number: 5 (lower is better) Translates to: FRNYGHGICQHEVEI*NEAVLESHFVTSYH Trigger: GTGATACGAGGTAACAAAGTGGCTTTCCAGGACTGCTTCATTGCAAATCTCTACTTCATGCTGACATATCCCATGACCATAATTTCTGAA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000194528.3 |
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| CDS CCA 90 bp | TCCATTTTTACCACAACATTTCCAATTCTATCTGTAAGGACTTGGTaGATTTTGCTGCCCTGTGATAACGATGACAGATTGGTCTCTCCT | + |
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Preference number: 5 (lower is better) Translates to: SIFTTTFPILSVRTW*ILLPCDNDDRLVSP Trigger: AGGAGAGACCAATCTGTCATCGTTATCACAGGGCAGCAAAATCCACCAAGTCCTTACAGATAGAATTGGAAATGTTGTGGTAAAAATGGA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000194528.3 |
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| CDS CCA 72 bp | CGGATGTTCCTGGTGTTGGTGGTACAGACAGAGCAGTaGGACAGAAGAACTGCAGCCTCCAGTGGGTGCCAT | + |
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Preference number: 6 (lower is better) Translates to: RMFLVLVVQTEQ*DRRTAASSGCH Trigger: ATGGCACCCACTGGAGGCTGCAGTTCTTCTGTCCCACTGCTCTGTCTGTACCACCAACACCAGGAACATCCG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000194528.3 |
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| CDS CCA 72 bp | AGGCCTATAGTTCTGAGGCCCCCAGACATCATCCAGTaGGATGTCTGGGTTTTCCTCTATCATCGAGTCCCA | + |
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Preference number: 6 (lower is better) Translates to: RPIVLRPPDIIQ*DVWVFLYHRVP Trigger: TGGGACTCGATGATAGAGGAAAACCCAGACATCCCACTGGATGATGTCTGGGGGCCTCAGAACTATAGGCCT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000194528.3 |
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| CDS GCA 72 bp | GAGCAGTGGGACAGAAGAACTGCAGCCTCCAGTGGGTaGCATAAATACTCAACAGACATTACTTCCAGCGTG | + |
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Preference number: 6 (lower is better) Translates to: EQWDRRTAASSG*HKYSTDITSSV Trigger: CACGCTGGAAGTAATGTCTGTTGAGTATTTATGGCACCCACTGGAGGCTGCAGTTCTTCTGTCCCACTGCTC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000194528.3 |
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| CDS CCA 72 bp | GCTGTCCCAGGGTATTCATCTGCTTGGTTAGTACCCTaGAACTCAGTGAAGGTTTCTTTGCGGTCCATATCA | + |
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Preference number: 6 (lower is better) Translates to: AVPGYSSAWLVP*NSVKVSLRSIS Trigger: TGATATGGACCGCAAAGAAACCTTCACTGAGTTCCAGGGTACTAACCAAGCAGATGAATACCCTGGGACAGC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000194528.3 |
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| CDS CCA 72 bp | CACTATATATCACTATGCGGATGTTCCTGGTGTTGGTaGTACAGACAGAGCAGTGGGACAGAAGAACTGCAG | + |
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Preference number: 6 (lower is better) Translates to: HYISLCGCSWCW*YRQSSGTEELQ Trigger: CTGCAGTTCTTCTGTCCCACTGCTCTGTCTGTACCACCAACACCAGGAACATCCGCATAGTGATATATAGTG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000194528.3 |
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| CDS CAA 72 bp | GGGCTCTTACTCTGGTCCAGGTTTGAAAGGAATCATTaGTTTGGAAAGTCTCCTGGTCAGTGGCCAAGAGAG | + |
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Preference number: 6 (lower is better) Translates to: GLLLWSRFERNH*FGKSPGQWPRE Trigger: CTCTCTTGGCCACTGACCAGGAGACTTTCCAAACAAATGATTCCTTTCAAACCTGGACCAGAGTAAGAGCCC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000194528.3 |
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| CDS CAA 72 bp | CAGGATACCTGGAGGGGCTCTTACTCTGGTCCAGGTTaGAAAGGAATCATTTGTTTGGAAAGTCTCCTGGTC | + |
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Preference number: 6 (lower is better) Translates to: QDTWRGSYSGPG*KGIICLESLLV Trigger: GACCAGGAGACTTTCCAAACAAATGATTCCTTTCAAACCTGGACCAGAGTAAGAGCCCCTCCAGGTATCCTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000194528.3 |
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| CDS CAA 90 bp | CAGTCAGATGCCGTTCCACTTCTTGGTTTCCAGCAATTGGCTTTATaGTGTGAATTCCAGCCCTTTTGCAGTGTAGTGTTGTCTTGGGTG | + |
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Preference number: 6 (lower is better) Translates to: QSDAVPLLGFQQLAL*CEFQPFCSVVLSWV Trigger: CACCCAAGACAACACTACACTGCAAAAGGGCTGGAATTCACACAATAAAGCCAATTGCTGGAAACCAAGAAGTGGAACGGCATCTGACTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000194528.3 |
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| CDS CAA 90 bp | TCAACTGTGAATATGAAAGGACGCTGTCCCAGGGTATTCATCTGCTaGGTTAGTACCCTGGAACTCAGTGAAGGTTTCTTTGCGGTCCAT | + |
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Preference number: 6 (lower is better) Translates to: STVNMKGRCPRVFIC*VSTLELSEGFFAVH Trigger: ATGGACCGCAAAGAAACCTTCACTGAGTTCCAGGGTACTAACCAAGCAGATGAATACCCTGGGACAGCGTCCTTTCATATTCACAGTTGA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000194528.3 |
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| CDS TCA 72 bp | CTTTGGCTATATCATCTGAAGACATTGGCAGGTGAATaGCCCAGGTTCCTTCTGAAGTTAAGGGACCTGGGT | + |
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Preference number: 6 (lower is better) Translates to: LWLYHLKTLAGE*PRFLLKLRDLG Trigger: ACCCAGGTCCCTTAACTTCAGAAGGAACCTGGGTCATTCACCTGCCAATGTCTTCAGATGATATAGCCAAAG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000194528.3 |
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| CDS TCA 72 bp | CTCATACTCAAGGTTTTGTGTCCAGGTCATTACACTTaGGCCATAGTGCTCCACAACAATGTAGAGACCCCG | + |
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Preference number: 6 (lower is better) Translates to: LILKVLCPGHYT*AIVLHNNVETP Trigger: CGGGGTCTCTACATTGTTGTGGAGCACTATGGCTCAAGTGTAATGACCTGGACACAAAACCTTGAGTATGAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000194528.3 |
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| CDS CCA 72 bp | ATGACCCAGGTTCCTTCTGAAGTTAAGGGACCTGGGTaGTACGTGAGCCTCTTCTCAACTGTGAATATGAAA | + |
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Preference number: 6 (lower is better) Translates to: MTQVPSEVKGPG*YVSLFSTVNMK Trigger: TTTCATATTCACAGTTGAGAAGAGGCTCACGTACCACCCAGGTCCCTTAACTTCAGAAGGAACCTGGGTCAT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000194528.3 |
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| CDS CCA 72 bp | TTGCACTATATATCACTATGCGGATGTTCCTGGTGTTaGTGGTACAGACAGAGCAGTGGGACAGAAGAACTG | + |
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Preference number: 6 (lower is better) Translates to: LHYISLCGCSWC*WYRQSSGTEEL Trigger: CAGTTCTTCTGTCCCACTGCTCTGTCTGTACCACCAACACCAGGAACATCCGCATAGTGATATATAGTGCAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000194528.3 |
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| CDS CAA 90 bp | TATTCATCTGCTTGGTTAGTACCCTGGAACTCAGTGAAGGTTTCTTaGCGGTCCATATCAGCTCTTCAGTGCTGGCACTTTCTGGATCAT | + |
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Preference number: 6 (lower is better) Translates to: YSSAWLVPWNSVKVS*RSISALQCWHFLDH Trigger: ATGATCCAGAAAGTGCCAGCACTGAAGAGCTGATATGGACCGCAAAGAAACCTTCACTGAGTTCCAGGGTACTAACCAAGCAGATGAATA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000194528.3 |
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| CDS TCA 72 bp | TACCGTCTACTAGAAACAGAGTTCCTTGGTCAAATATaGTCACGTCCCTCAGACTGTGCCTTTGAGCATCAC | + |
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Preference number: 6 (lower is better) Translates to: YRLLETEFLGQI*SRPSDCAFEHH Trigger: GTGATGCTCAAAGGCACAGTCTGAGGGACGTGATCATATTTGACCAAGGAACTCTGTTTCTAGTAGACGGTA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000194528.3 |
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| CDS GCA 72 bp | GTGTCCACGTTTGGAATATTGCACTATATATCACTATaGGGATGTTCCTGGTGTTGGTGGTACAGACAGAGC | + |
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Preference number: 6 (lower is better) Translates to: VSTFGILHYISL*GCSWCWWYRQS Trigger: GCTCTGTCTGTACCACCAACACCAGGAACATCCGCATAGTGATATATAGTGCAATATTCCAAACGTGGACAC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000194528.3 |
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| CDS CCA 72 bp | AGTCAGATGCCGTTCCACTTCTTGGTTTCCAGCAATTaGCTTTATTGTGTGAATTCCAGCCCTTTTGCAGTG | + |
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Preference number: 6 (lower is better) Translates to: SQMPFHFLVSSN*LYCVNSSPFAV Trigger: CACTGCAAAAGGGCTGGAATTCACACAATAAAGCCAATTGCTGGAAACCAAGAAGTGGAACGGCATCTGACT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000194528.3 |
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| CDS CCA 72 bp | CAGGCATGGCAGAGTAAAGAAAGCGAAATTCTAAAATaGCCTCCTTGGGCAGTTGTAGTTCAAAGTCCTGGA | + |
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Preference number: 6 (lower is better) Translates to: QAWQSKESEILK*PPWAVVVQSPG Trigger: TCCAGGACTTTGAACTACAACTGCCCAAGGAGGCCATTTTAGAATTTCGCTTTCTTTACTCTGCCATGCCTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000194528.3 |
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| CDS CAA 72 bp | CAGTCAGATGCCGTTCCACTTCTTGGTTTCCAGCAATaGGCTTTATTGTGTGAATTCCAGCCCTTTTGCAGT | + |
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Preference number: 6 (lower is better) Translates to: QSDAVPLLGFQQ*ALLCEFQPFCS Trigger: ACTGCAAAAGGGCTGGAATTCACACAATAAAGCCAATTGCTGGAAACCAAGAAGTGGAACGGCATCTGACTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000194528.3 |
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| CDS CAA 72 bp | ATTGCACTATATATCACTATGCGGATGTTCCTGGTGTaGGTGGTACAGACAGAGCAGTGGGACAGAAGAACT | + |
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Preference number: 6 (lower is better) Translates to: IALYITMRMFLV*VVQTEQWDRRT Trigger: AGTTCTTCTGTCCCACTGCTCTGTCTGTACCACCAACACCAGGAACATCCGCATAGTGATATATAGTGCAAT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000194528.3 |
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| CDS TCA 72 bp | ATCACTTTGGCTATATCATCTGAAGACATTGGCAGGTaGATGACCCAGGTTCCTTCTGAAGTTAAGGGACCT | + |
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Preference number: 6 (lower is better) Translates to: ITLAISSEDIGR*MTQVPSEVKGP Trigger: AGGTCCCTTAACTTCAGAAGGAACCTGGGTCATTCACCTGCCAATGTCTTCAGATGATATAGCCAAAGTGAT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000194528.3 |
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| CDS TCA 72 bp | CACTTTGTTACCTCGTATCACTTTGGCTATATCATCTaGAGACATTGGCAGGTGAATGACCCAGGTTCCTTC | + |
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Preference number: 6 (lower is better) Translates to: HFVTSYHFGYII*RHWQVNDPGSF Trigger: GAAGGAACCTGGGTCATTCACCTGCCAATGTCTTCAGATGATATAGCCAAAGTGATACGAGGTAACAAAGTG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000194528.3 |
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| CDS CAA 72 bp | AATATGAAAGGACGCTGTCCCAGGGTATTCATCTGCTaGGTTAGTACCCTGGAACTCAGTGAAGGTTTCTTT | + |
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Preference number: 6 (lower is better) Translates to: NMKGRCPRVFIC*VSTLELSEGFF Trigger: AAAGAAACCTTCACTGAGTTCCAGGGTACTAACCAAGCAGATGAATACCCTGGGACAGCGTCCTTTCATATT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000194528.3 |
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| CDS CAA 72 bp | TCTTACTCTGGTCCAGGTTTGAAAGGAATCATTTGTTaGGAAAGTCTCCTGGTCAGTGGCCAAGAGAGCAAA | + |
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Preference number: 6 (lower is better) Translates to: SYSGPGLKGIIC*ESLLVSGQESK Trigger: TTTGCTCTCTTGGCCACTGACCAGGAGACTTTCCAAACAAATGATTCCTTTCAAACCTGGACCAGAGTAAGA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000194528.3 |
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| CDS CAA 72 bp | TGGTGGATTTTGCTGCCCTGTGATAACGATGACAGATaGGTCTCTCCTGAAGGTGTTGATATAGTTCCAACA | + |
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Preference number: 6 (lower is better) Translates to: WWILLPCDNDDR*VSPEGVDIVPT Trigger: TGTTGGAACTATATCAACACCTTCAGGAGAGACCAATCTGTCATCGTTATCACAGGGCAGCAAAATCCACCA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000194528.3 |
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| CDS CAA 90 bp | AATTATCCACAGTCAGATGCCGTTCCACTTCTTGGTTTCCAGCAATaGGCTTTATTGTGTGAATTCCAGCCCTTTTGCAGTGTAGTGTTG | + |
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Preference number: 6 (lower is better) Translates to: NYPQSDAVPLLGFQQ*ALLCEFQPFCSVVL Trigger: CAACACTACACTGCAAAAGGGCTGGAATTCACACAATAAAGCCAATTGCTGGAAACCAAGAAGTGGAACGGCATCTGACTGTGGATAATT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000194528.3 |
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| CDS CAA 90 bp | GTAAGGACTTGGTGGATTTTGCTGCCCTGTGATAACGATGACAGATaGGTCTCTCCTGAAGGTGTTGATATAGTTCCAACAACAGTGAAA | + |
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Preference number: 6 (lower is better) Translates to: VRTWWILLPCDNDDR*VSPEGVDIVPTTVK Trigger: TTTCACTGTTGTTGGAACTATATCAACACCTTCAGGAGAGACCAATCTGTCATCGTTATCACAGGGCAGCAAAATCCACCAAGTCCTTAC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000194528.3 |
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| CDS TCA 72 bp | TCCACTTCTTGGTTTCCAGCAATTGGCTTTATTGTGTaGATTCCAGCCCTTTTGCAGTGTAGTGTTGTCTTG | + |
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Preference number: 6 (lower is better) Translates to: STSWFPAIGFIV*IPALLQCSVVL Trigger: CAAGACAACACTACACTGCAAAAGGGCTGGAATTCACACAATAAAGCCAATTGCTGGAAACCAAGAAGTGGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000194528.3 |
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| CDS CAA 72 bp | GTAGTTCAAAGTCCTGGAGTGTCCACGTTTGGAATATaGCACTATATATCACTATGCGGATGTTCCTGGTGT | + |
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Preference number: 6 (lower is better) Translates to: VVQSPGVSTFGI*HYISLCGCSWC Trigger: ACACCAGGAACATCCGCATAGTGATATATAGTGCAATATTCCAAACGTGGACACTCCAGGACTTTGAACTAC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000194528.3 |
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| CDS CAA 90 bp | TTTACCACAACATTTCCAATTCTATCTGTAAGGACTTGGTGGATTTaGCTGCCCTGTGATAACGATGACAGATTGGTCTCTCCTGAAGGT | + |
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Preference number: 6 (lower is better) Translates to: FTTTFPILSVRTWWI*LPCDNDDRLVSPEG Trigger: ACCTTCAGGAGAGACCAATCTGTCATCGTTATCACAGGGCAGCAAAATCCACCAAGTCCTTACAGATAGAATTGGAAATGTTGTGGTAAA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000194528.3 |
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| CDS CCA 72 bp | ACCACAACATTTCCAATTCTATCTGTAAGGACTTGGTaGATTTTGCTGCCCTGTGATAACGATGACAGATTG | + |
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Preference number: 6 (lower is better) Translates to: TTTFPILSVRTW*ILLPCDNDDRL Trigger: CAATCTGTCATCGTTATCACAGGGCAGCAAAATCCACCAAGTCCTTACAGATAGAATTGGAAATGTTGTGGT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000194528.3 |
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| CDS CAA 72 bp | ACATTTCCAATTCTATCTGTAAGGACTTGGTGGATTTaGCTGCCCTGTGATAACGATGACAGATTGGTCTCT | + |
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Preference number: 6 (lower is better) Translates to: TFPILSVRTWWI*LPCDNDDRLVS Trigger: AGAGACCAATCTGTCATCGTTATCACAGGGCAGCAAAATCCACCAAGTCCTTACAGATAGAATTGGAAATGT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000194528.3 |
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| CDS CCA 72 bp | TTTACCACAACATTTCCAATTCTATCTGTAAGGACTTaGTGGATTTTGCTGCCCTGTGATAACGATGACAGA | + |
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Preference number: 6 (lower is better) Translates to: FTTTFPILSVRT*WILLPCDNDDR Trigger: TCTGTCATCGTTATCACAGGGCAGCAAAATCCACCAAGTCCTTACAGATAGAATTGGAAATGTTGTGGTAAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000194528.3 |
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| CDS TCA 72 bp | GCTCTTATTGAATCCTCGAACCATAATGTATTTACTTaGATCGCAGCCAACATCGATTTCAAACACTGGTTT | + |
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Preference number: 6 (lower is better) Translates to: ALIESSNHNVFT*IAANIDFKHWF Trigger: AAACCAGTGTTTGAAATCGATGTTGGCTGCGATTCAAGTAAATACATTATGGTTCGAGGATTCAATAAGAGC 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000194528.3 |
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| CDS CCA 72 bp | CTAATTTTTCTTCTGTTTTGCAGGACGCTTGTGAAGTaGCTCAATAATAAACTGCCTGTAAATCTTCAAGTA | + |
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Preference number: 6 (lower is better) Translates to: LIFLLFCRTLVK*LNNKLPVNLQV Trigger: TACTTGAAGATTTACAGGCAGTTTATTATTGAGCCACTTCACAAGCGTCCTGCAAAACAGAAGAAAAATTAG 36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000194528.3 |
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| CDS CAA 72 bp | AATAAATCCATTTTCATCATACAATTCTACTATAGGTaGAAACATTTGTCCCAATTCAAGGGTGAGAGGGCA | + |
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Preference number: 6 (lower is better) Translates to: NKSIFIIQFYYR*KHLSQFKGERA Trigger: TGCCCTCTCACCCTTGAATTGGGACAAATGTTTCAACCTATAGTAGAATTGTATGATGAAAATGGATTTATT 35% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000194528.3 |
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