Pregenerated sensors for CATSPERD (Mus musculus)
Ensembl gene IDs: ENSMUSG00000040828Ensembl transcript IDs: ENSMUST00000112979.4, ENSMUST00000233947.2
Found 150 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 72 bp | TTCACGGTTAACAATTTATTGGGACAAAAGCTAACGTaGACACACGTGGAGGGGAAGGGAAAGGCCTCTCAT | + |
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Preference number: 3 (lower is better) Translates to: FTVNNLLGQKLT*THVEGKGKASH Trigger: ATGAGAGGCCTTTCCCTTCCCCTCCACGTGTGTCCACGTTAGCTTTTGTCCCAATAAATTGTTAACCGTGAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000112979.4 |
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| CDS-3UTR GCA 90 bp | GGAGGGGAAGGGAAAGGCCTCTCATTGGAGCGCACTCTGAGTCTAGGGCGGCCCTGCCACGCAGCCAGGTaGAGAAGCAGACCCCTAGGC | + |
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Preference number: 4 (lower is better) Translates to: GGEGKGLSLERTLSLGRPCHAAR*RSRPLG Trigger: GCCTAGGGGTCTGCTTCTGCACCTGGCTGCGTGGCA...GGGCCGCCCTAGACTCAGAGTGCGCTCCAATGAGAGGCCTTTCCCTTCCCCTCC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000112979.4 ENSMUST00000233947.2 |
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| CDS-3UTR TCA 90 bp | GGACACACGTGGAGGGGAAGGGAAAGGCCTCTCATTGGAGCGCACTCTGAGTCTGTGGGCGCTTGTGATTaGTGGCACCCCCACCGCCAA | + |
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Preference number: 4 (lower is better) Translates to: GHTWRGRERPLIGAHSESVGACD*WHPHRQ Trigger: TTGGCGGTGGGGGTGCCATCAATCACAAGCGCCCAC...AGACTCAGAGTGCGCTCCAATGAGAGGCCTTTCCCTTCCCCTCCACGTGTGTCC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000112979.4 |
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| CDS-3UTR GCA 90 bp | CTAACGTGGACACACGTGGAGGGGAAGGGAAAGGCCTCTCATTGGAGCGCACTCTGCCACGCAGCCAGGTaGAGAAGCAGACCCCTAGGC | + |
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Preference number: 4 (lower is better) Translates to: LTWTHVEGKGKASHWSALCHAAR*RSRPLG Trigger: GCCTAGGGGTCTGCTTCTGCACCTGGCTGCGTGGCA...GAGTGCGCTCCAATGAGAGGCCTTTCCCTTCCCCTCCACGTGTGTCCACGTTAG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000112979.4 ENSMUST00000233947.2 |
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| CDS-3UTR TCA 90 bp | CTAACGTGGACACACGTGGAGGGGAAGGGAAAGGCCTCTCATTGGAGCGCACTCACAGTGTGTGAGCCCTaGCCATGGTGGCCACTGCTG | + |
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Preference number: 4 (lower is better) Translates to: LTWTHVEGKGKASHWSALTVCEP*PWWPLL Trigger: CAGCAGTGGCCACCATGGTCAGGGCTCACACACTGT...GAGTGCGCTCCAATGAGAGGCCTTTCCCTTCCCCTCCACGTGTGTCCACGTTAG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000112979.4 |
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| CDS-3UTR TCA 90 bp | GGACACACGTGGAGGGGAAGGGAAAGGCCTCTCATTGGAGCGCACTCTGAGTCTGGTCAGCAACAGGGGTaGGGACCTGCAGTATGCCGA | + |
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Preference number: 4 (lower is better) Translates to: GHTWRGRERPLIGAHSESGQQQG*GPAVCR Trigger: TCGGCATACTGCAGGTCCTCACCCCTGTTGCTGACC...AGACTCAGAGTGCGCTCCAATGAGAGGCCTTTCCCTTCCCCTCCACGTGTGTCC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000112979.4 ENSMUST00000233947.2 |
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| CDS-3UTR TCA 90 bp | CACACGTGGAGGGGAAGGGAAAGGCCTCTCATTGGAGCGCACTCTGAGTCTAGGGGTCAGCAACAGGGGTaGGGACCTGCAGTATGCCGA | + |
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Preference number: 4 (lower is better) Translates to: HTWRGRERPLIGAHSESRGQQQG*GPAVCR Trigger: TCGGCATACTGCAGGTCCTCACCCCTGTTGCTGACC...CCTAGACTCAGAGTGCGCTCCAATGAGAGGCCTTTCCCTTCCCCTCCACGTGTG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000112979.4 ENSMUST00000233947.2 |
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| CDS-3UTR GCA 90 bp | CGTGGACACACGTGGAGGGGAAGGGAAAGGCCTCTCATTGGAGCGCACTCTGAGGCCACTGTCTCAGTTTaGCACGCAGCCAGGTGCAGA | + |
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Preference number: 4 (lower is better) Translates to: RGHTWRGRERPLIGAHSEATVSV*HAARCR Trigger: TCTGCACCTGGCTGCGTGGCAAACTGAGACAGTGGC...CTCAGAGTGCGCTCCAATGAGAGGCCTTTCCCTTCCCCTCCACGTGTGTCCACG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000112979.4 ENSMUST00000233947.2 |
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| CDS-3UTR GCA 90 bp | ACGTGGAGGGGAAGGGAAAGGCCTCTCATTGGAGCGCACTCTGAGTCTAGGGCGGCCACTGTCTCAGTTTaGCACGCAGCCAGGTGCAGA | + |
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Preference number: 4 (lower is better) Translates to: TWRGRERPLIGAHSESRAATVSV*HAARCR Trigger: TCTGCACCTGGCTGCGTGGCAAACTGAGACAGTGGC...CGCCCTAGACTCAGAGTGCGCTCCAATGAGAGGCCTTTCCCTTCCCCTCCACGT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000112979.4 ENSMUST00000233947.2 |
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| CDS-3UTR CCA 90 bp | GGAGGGGAAGGGAAAGGCCTCTCATTGGAGCGCACTCTGAGTCTAGGGCGGCCCATAGGCTGCAAAGTGTaGGTCAGCAACAGGGGTGAG | + |
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Preference number: 4 (lower is better) Translates to: GGEGKGLSLERTLSLGRPIGCKV*VSNRGE Trigger: CTCACCCCTGTTGCTGACCCACACTTTGCAGCCTAT...GGGCCGCCCTAGACTCAGAGTGCGCTCCAATGAGAGGCCTTTCCCTTCCCCTCC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000112979.4 ENSMUST00000233947.2 |
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| CDS-3UTR TCA 90 bp | GGAGGGGAAGGGAAAGGCCTCTCATTGGAGCGCACTCTGAGTCTAGGGCGGCCCTGTCTTCGTGGCAGCTaGCATAGTTCTCTCTGTTCC | + |
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Preference number: 4 (lower is better) Translates to: GGEGKGLSLERTLSLGRPCLRGS*HSSLCS Trigger: GGAACAGAGAGAACTATGTCAGCTGCCACGAAGACA...GGGCCGCCCTAGACTCAGAGTGCGCTCCAATGAGAGGCCTTTCCCTTCCCCTCC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000112979.4 ENSMUST00000233947.2 |
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| CDS-3UTR GCA 90 bp | CGTGGAGGGGAAGGGAAAGGCCTCTCATTGGAGCGCACTCTGAGTCTAGGGCGGGGGCAACTCGCACCTTaGCTCTGTTCTGGTCTTTCA | + |
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Preference number: 4 (lower is better) Translates to: RGGEGKGLSLERTLSLGRGQLAP*LCSGLS Trigger: TGAAAGACCAGAACAGAGGCAAGGTGCGAGTTGCCC...CCGCCCTAGACTCAGAGTGCGCTCCAATGAGAGGCCTTTCCCTTCCCCTCCACG 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000112979.4 ENSMUST00000233947.2 |
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| CDS-3UTR CCA 90 bp | TGGAGGGGAAGGGAAAGGCCTCTCATTGGAGCGCACTCTGAGTCTAGGGCGGCCACCTTGCCTCTGTTCTaGTCTTTCACCCTTCTGGGG | + |
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Preference number: 4 (lower is better) Translates to: WRGRERPLIGAHSESRAATLPLF*SFTLLG Trigger: CCCCAGAAGGGTGAAAGACCAGAACAGAGGCAAGGT...GGCCGCCCTAGACTCAGAGTGCGCTCCAATGAGAGGCCTTTCCCTTCCCCTCCA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000112979.4 ENSMUST00000233947.2 |
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| CDS-3UTR GCA 90 bp | ACGTGGAGGGGAAGGGAAAGGCCTCTCATTGGAGCGCACTCTGAGTCTAGGGCGTATCCGATTCAAAGGTaGTCCAGTTCTGGGGCTGTG | + |
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Preference number: 4 (lower is better) Translates to: TWRGRERPLIGAHSESRAYPIQR*SSSGAV Trigger: CACAGCCCCAGAACTGGAGCACCTTTGAATCGGATA...CGCCCTAGACTCAGAGTGCGCTCCAATGAGAGGCCTTTCCCTTCCCCTCCACGT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000112979.4 ENSMUST00000233947.2 |
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| CDS-3UTR CCA 90 bp | AACGTGGACACACGTGGAGGGGAAGGGAAAGGCCTCTCATTGGAGCGCACTCTGGGTTCAGGATTCCCATaGTGCAGGCGGAGATCTTGT | + |
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Preference number: 4 (lower is better) Translates to: NVDTRGGEGKGLSLERTLGSGFP*CRRRSC Trigger: ACAAGATCTCCGCCTGCACCATGGGAATCCTGAACC...CAGAGTGCGCTCCAATGAGAGGCCTTTCCCTTCCCCTCCACGTGTGTCCACGTT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000112979.4 ENSMUST00000233947.2 |
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| CDS-3UTR CCA 90 bp | GGAGGGGAAGGGAAAGGCCTCTCATTGGAGCGCACTCTGAGTCTAGGGCGGCCCTGGGCTTCACCATTGTaGTTGATAGGATCGTATGCT | + |
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Preference number: 4 (lower is better) Translates to: GGEGKGLSLERTLSLGRPWASPL*LIGSYA Trigger: AGCATACGATCCTATCAACCACAATGGTGAAGCCCA...GGGCCGCCCTAGACTCAGAGTGCGCTCCAATGAGAGGCCTTTCCCTTCCCCTCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000112979.4 ENSMUST00000233947.2 |
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| CDS-3UTR CCA 90 bp | GTGGACACACGTGGAGGGGAAGGGAAAGGCCTCTCATTGGAGCGCACTCTGAGTGAGGATGGTGAGCAATaGTTGGAACTTCGTCACCGG | + |
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Preference number: 4 (lower is better) Translates to: VDTRGGEGKGLSLERTLSEDGEQ*LELRHR Trigger: CCGGTGACGAAGTTCCAACCATTGCTCACCATCCTC...ACTCAGAGTGCGCTCCAATGAGAGGCCTTTCCCTTCCCCTCCACGTGTGTCCAC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000112979.4 ENSMUST00000233947.2 |
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| CDS-3UTR TCA 90 bp | CGTGGAGGGGAAGGGAAAGGCCTCTCATTGGAGCGCACTCTGAGTCTAGGGCGGAGTGTTCCTGTCAGGTaGCTCAGTTTGTCAGTATTC | + |
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Preference number: 4 (lower is better) Translates to: RGGEGKGLSLERTLSLGRSVPVR*LSLSVF Trigger: GAATACTGACAAACTGAGTCACCTGACAGGAACACT...CCGCCCTAGACTCAGAGTGCGCTCCAATGAGAGGCCTTTCCCTTCCCCTCCACG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000112979.4 |
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| CDS-3UTR TCA 90 bp | GGAGGGGAAGGGAAAGGCCTCTCATTGGAGCGCACTCTGAGTCTAGGGCGGCCCCAACACTGTAGATGTTaGTGTTGGCATGTTCGACAT | + |
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Preference number: 4 (lower is better) Translates to: GGEGKGLSLERTLSLGRPQHCRC*CWHVRH Trigger: ATGTCGAACATGCCAACATCAACATCTACAGTGTTG...GGGCCGCCCTAGACTCAGAGTGCGCTCCAATGAGAGGCCTTTCCCTTCCCCTCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000112979.4 ENSMUST00000233947.2 |
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| CDS-3UTR TCA 90 bp | ACGTGGAGGGGAAGGGAAAGGCCTCTCATTGGAGCGCACTCTGAGTCTAGGGCGTCCACATTACATGGTTaGAGCGCCAGCTTTTCATCC | + |
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Preference number: 4 (lower is better) Translates to: TWRGRERPLIGAHSESRASTLHG*SASFSS Trigger: GGATGAAAAGCTGGCGCTTCAACCATGTAATGTGGA...CGCCCTAGACTCAGAGTGCGCTCCAATGAGAGGCCTTTCCCTTCCCCTCCACGT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000112979.4 |
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| CDS-3UTR GCA 90 bp | ACACGTGGAGGGGAAGGGAAAGGCCTCTCATTGGAGCGCACTCTGAGTCTAGGGTATCCGATTCAAAGGTaGTCCAGTTCTGGGGCTGTG | + |
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Preference number: 4 (lower is better) Translates to: TRGGEGKGLSLERTLSLGYPIQR*SSSGAV Trigger: CACAGCCCCAGAACTGGAGCACCTTTGAATCGGATA...CCCTAGACTCAGAGTGCGCTCCAATGAGAGGCCTTTCCCTTCCCCTCCACGTGT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000112979.4 ENSMUST00000233947.2 |
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| CDS-3UTR GCA 90 bp | AAGCTAACGTGGACACACGTGGAGGGGAAGGGAAAGGCCTCTCATTGGAGCGCAGGGCAACTCGCACCTTaGCTCTGTTCTGGTCTTTCA | + |
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Preference number: 4 (lower is better) Translates to: KLTWTHVEGKGKASHWSAGQLAP*LCSGLS Trigger: TGAAAGACCAGAACAGAGGCAAGGTGCGAGTTGCCC...TGCGCTCCAATGAGAGGCCTTTCCCTTCCCCTCCACGTGTGTCCACGTTAGCTT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000112979.4 ENSMUST00000233947.2 |
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| CDS-3UTR TCA 90 bp | TGGAGGGGAAGGGAAAGGCCTCTCATTGGAGCGCACTCTGAGTCTAGGGCGGCCCAACACTGTAGATGTTaGTGTTGGCATGTTCGACAT | + |
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Preference number: 4 (lower is better) Translates to: WRGRERPLIGAHSESRAAQHCRC*CWHVRH Trigger: ATGTCGAACATGCCAACATCAACATCTACAGTGTTG...GGCCGCCCTAGACTCAGAGTGCGCTCCAATGAGAGGCCTTTCCCTTCCCCTCCA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000112979.4 ENSMUST00000233947.2 |
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| CDS-3UTR TCA 90 bp | AAAGCTAACGTGGACACACGTGGAGGGGAAGGGAAAGGCCTCTCATTGGAGCGCTGTCTTCGTGGCAGCTaGCATAGTTCTCTCTGTTCC | + |
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Preference number: 4 (lower is better) Translates to: KANVDTRGGEGKGLSLERCLRGS*HSSLCS Trigger: GGAACAGAGAGAACTATGTCAGCTGCCACGAAGACA...GCGCTCCAATGAGAGGCCTTTCCCTTCCCCTCCACGTGTGTCCACGTTAGCTTT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000112979.4 ENSMUST00000233947.2 |
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| CDS-3UTR TCA 90 bp | AAAGCTAACGTGGACACACGTGGAGGGGAAGGGAAAGGCCTCTCATTGGAGCGCGGCAAAAGGAGCCTTTaGAACAACAAACGTCACCAC | + |
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Preference number: 4 (lower is better) Translates to: KANVDTRGGEGKGLSLERGKRSL*NNKRHH Trigger: GTGGTGACGTTTGTTGTTTCAAAGGCTCCTTTTGCC...GCGCTCCAATGAGAGGCCTTTCCCTTCCCCTCCACGTGTGTCCACGTTAGCTTT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000112979.4 |
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| CDS-3UTR TCA 90 bp | CGTGGAGGGGAAGGGAAAGGCCTCTCATTGGAGCGCACTCTGAGTCTAGGGCGGAAGGAGATTCTTGTATaGAAAGGCTATCCCCATACT | + |
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Preference number: 4 (lower is better) Translates to: RGGEGKGLSLERTLSLGRKEILV*KGYPHT Trigger: AGTATGGGGATAGCCTTTTCATACAAGAATCTCCTT...CCGCCCTAGACTCAGAGTGCGCTCCAATGAGAGGCCTTTCCCTTCCCCTCCACG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000112979.4 |
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| CDS-3UTR TCA 90 bp | GTGGACACACGTGGAGGGGAAGGGAAAGGCCTCTCATTGGAGCGCACTCTGAGTCAGCTCGTAAGCATTTaGGGCAACACTGTAGATGTT | + |
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Preference number: 4 (lower is better) Translates to: VDTRGGEGKGLSLERTLSQLVSI*GNTVDV Trigger: AACATCTACAGTGTTGCCTCAAATGCTTACGAGCTG...ACTCAGAGTGCGCTCCAATGAGAGGCCTTTCCCTTCCCCTCCACGTGTGTCCAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000112979.4 ENSMUST00000233947.2 |
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| CDS-3UTR GCA 90 bp | CTAACGTGGACACACGTGGAGGGGAAGGGAAAGGCCTCTCATTGGAGCGCACTCTCCATGAGAGAGGACTaGACATTCACTGTACACTTG | + |
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Preference number: 4 (lower is better) Translates to: LTWTHVEGKGKASHWSALSMRED*TFTVHL Trigger: CAAGTGTACAGTGAATGTGCAGTCCTCTCTCATGGA...GAGTGCGCTCCAATGAGAGGCCTTTCCCTTCCCCTCCACGTGTGTCCACGTTAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000112979.4 ENSMUST00000233947.2 |
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| CDS-3UTR GCA 90 bp | GACACACGTGGAGGGGAAGGGAAAGGCCTCTCATTGGAGCGCACTCTGAGTCTATCAGGATTCCCATGGTaGAGGCGGAGATCTTGTTTT | + |
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Preference number: 4 (lower is better) Translates to: DTRGGEGKGLSLERTLSLSGFPW*RRRSCF Trigger: AAAACAAGATCTCCGCCTGCACCATGGGAATCCTGA...TAGACTCAGAGTGCGCTCCAATGAGAGGCCTTTCCCTTCCCCTCCACGTGTGTC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000112979.4 ENSMUST00000233947.2 |
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| CDS-3UTR CCA 90 bp | GACACACGTGGAGGGGAAGGGAAAGGCCTCTCATTGGAGCGCACTCTGAGTCTAACTATCAGGTCATCCTaGGCTTCACCATTGTGGTTG | + |
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Preference number: 4 (lower is better) Translates to: DTRGGEGKGLSLERTLSLTIRSS*ASPLWL Trigger: CAACCACAATGGTGAAGCCCAGGATGACCTGATAGT...TAGACTCAGAGTGCGCTCCAATGAGAGGCCTTTCCCTTCCCCTCCACGTGTGTC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000112979.4 ENSMUST00000233947.2 |
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| CDS-3UTR CCA 90 bp | ACAAAAGCTAACGTGGACACACGTGGAGGGGAAGGGAAAGGCCTCTCATTGGAGACCTTGCCTCTGTTCTaGTCTTTCACCCTTCTGGGG | + |
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Preference number: 4 (lower is better) Translates to: TKANVDTRGGEGKGLSLETLPLF*SFTLLG Trigger: CCCCAGAAGGGTGAAAGACCAGAACAGAGGCAAGGT...CTCCAATGAGAGGCCTTTCCCTTCCCCTCCACGTGTGTCCACGTTAGCTTTTGT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000112979.4 ENSMUST00000233947.2 |
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| CDS-3UTR TCA 90 bp | CTAACGTGGACACACGTGGAGGGGAAGGGAAAGGCCTCTCATTGGAGCGCACTCAGGAGTATGAATAGGTaGCTAGTCCATTTATCTCCG | + |
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Preference number: 4 (lower is better) Translates to: LTWTHVEGKGKASHWSALRSMNR*LVHLSP Trigger: CGGAGATAAATGGACTAGTCACCTATTCATACTCCT...GAGTGCGCTCCAATGAGAGGCCTTTCCCTTCCCCTCCACGTGTGTCCACGTTAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000112979.4 ENSMUST00000233947.2 |
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| CDS-3UTR GCA 90 bp | CGTGGAGGGGAAGGGAAAGGCCTCTCATTGGAGCGCACTCTGAGTCTAGGGCGGGCGGAGATCTTGTTTTaGACAACAATTTTCTTTGTC | + |
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Preference number: 4 (lower is better) Translates to: RGGEGKGLSLERTLSLGRAEILF*TTIFFV Trigger: GACAAAGAAAATTGTTGTGCAAAACAAGATCTCCGC...CCGCCCTAGACTCAGAGTGCGCTCCAATGAGAGGCCTTTCCCTTCCCCTCCACG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000112979.4 ENSMUST00000233947.2 |
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| CDS-3UTR CCA 90 bp | ACGTGGAGGGGAAGGGAAAGGCCTCTCATTGGAGCGCACTCTGAGTCTAGGGCGAAACCCCCTCTGGTATaGTTTCATAATGACTTCAAG | + |
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Preference number: 4 (lower is better) Translates to: TWRGRERPLIGAHSESRAKPPLV*FHNDFK Trigger: CTTGAAGTCATTATGAAACCATACCAGAGGGGGTTT...CGCCCTAGACTCAGAGTGCGCTCCAATGAGAGGCCTTTCCCTTCCCCTCCACGT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000112979.4 |
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| CDS-3UTR TCA 90 bp | ACACGTGGAGGGGAAGGGAAAGGCCTCTCATTGGAGCGCACTCTGAGTCTAGGGCATACTCTGCGTTCATaGTTTCTTCTACAATCCCAT | + |
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Preference number: 4 (lower is better) Translates to: TRGGEGKGLSLERTLSLGHTLRS*FLLQSH Trigger: ATGGGATTGTAGAAGAAATCATGAACGCAGAGTATG...CCCTAGACTCAGAGTGCGCTCCAATGAGAGGCCTTTCCCTTCCCCTCCACGTGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000112979.4 ENSMUST00000233947.2 |
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| CDS-3UTR CCA 90 bp | AATTTATTGGGACAAAAGCTAACGTGGACACACGTGGAGGGGAAGGGAAAGGCCATAGGCTGCAAAGTGTaGGTCAGCAACAGGGGTGAG | + |
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Preference number: 4 (lower is better) Translates to: NLLGQKLTWTHVEGKGKAIGCKV*VSNRGE Trigger: CTCACCCCTGTTGCTGACCCACACTTTGCAGCCTAT...GGCCTTTCCCTTCCCCTCCACGTGTGTCCACGTTAGCTTTTGTCCCAATAAATT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000112979.4 ENSMUST00000233947.2 |
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| CDS-3UTR CCA 90 bp | ACAAAAGCTAACGTGGACACACGTGGAGGGGAAGGGAAAGGCCTCTCATTGGAGACTATCAGGTCATCCTaGGCTTCACCATTGTGGTTG | + |
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Preference number: 4 (lower is better) Translates to: TKANVDTRGGEGKGLSLETIRSS*ASPLWL Trigger: CAACCACAATGGTGAAGCCCAGGATGACCTGATAGT...CTCCAATGAGAGGCCTTTCCCTTCCCCTCCACGTGTGTCCACGTTAGCTTTTGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000112979.4 ENSMUST00000233947.2 |
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| CDS-3UTR CCA 90 bp | AATTTATTGGGACAAAAGCTAACGTGGACACACGTGGAGGGGAAGGGAAAGGCCGAGGATGGTGAGCAATaGTTGGAACTTCGTCACCGG | + |
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Preference number: 4 (lower is better) Translates to: NLLGQKLTWTHVEGKGKAEDGEQ*LELRHR Trigger: CCGGTGACGAAGTTCCAACCATTGCTCACCATCCTC...GGCCTTTCCCTTCCCCTCCACGTGTGTCCACGTTAGCTTTTGTCCCAATAAATT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000112979.4 ENSMUST00000233947.2 |
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| CDS-3UTR TCA 90 bp | CAAAAGCTAACGTGGACACACGTGGAGGGGAAGGGAAAGGCCTCTCATTGGAGCACGTCACCACTAATGTaGGAGACAGGTTCTGATATA | + |
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Preference number: 4 (lower is better) Translates to: QKLTWTHVEGKGKASHWSTSPLM*ETGSDI Trigger: TATATCAGAACCTGTCTCTCACATTAGTGGTGACGT...GCTCCAATGAGAGGCCTTTCCCTTCCCCTCCACGTGTGTCCACGTTAGCTTTTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000112979.4 |
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| CDS-3UTR TCA 90 bp | GTTAACAATTTATTGGGACAAAAGCTAACGTGGACACACGTGGAGGGGAAGGGACCTTCCGGGGTATCATaGGGGCAGACAGTTTCAGCT | + |
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Preference number: 4 (lower is better) Translates to: VNNLLGQKLTWTHVEGKGPSGVS*GQTVSA Trigger: AGCTGAAACTGTCTGCCCTCATGATACCCCGGAAGG...TCCCTTCCCCTCCACGTGTGTCCACGTTAGCTTTTGTCCCAATAAATTGTTAAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENSMUST00000112979.4 |
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| CDS-3UTR TCA 90 bp | GACACACGTGGAGGGGAAGGGAAAGGCCTCTCATTGGAGCGCACTCTGAGTCTACATACTCTGCGTTCATaGTTTCTTCTACAATCCCAT | + |
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Preference number: 4 (lower is better) Translates to: DTRGGEGKGLSLERTLSLHTLRS*FLLQSH Trigger: ATGGGATTGTAGAAGAAATCATGAACGCAGAGTATG...TAGACTCAGAGTGCGCTCCAATGAGAGGCCTTTCCCTTCCCCTCCACGTGTGTC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000112979.4 ENSMUST00000233947.2 |
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| CDS-3UTR GCA 90 bp | AAAGCTAACGTGGACACACGTGGAGGGGAAGGGAAAGGCCTCTCATTGGAGCGCATATGGTGTTCAGGTTaGAGTAGCTGTAGTATGGAT | + |
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Preference number: 4 (lower is better) Translates to: KANVDTRGGEGKGLSLERIWCSG*SSCSMD Trigger: ATCCATACTACAGCTACTGCAACCTGAACACCATAT...GCGCTCCAATGAGAGGCCTTTCCCTTCCCCTCCACGTGTGTCCACGTTAGCTTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000112979.4 ENSMUST00000233947.2 |
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| CDS-3UTR CCA 90 bp | GGACACACGTGGAGGGGAAGGGAAAGGCCTCTCATTGGAGCGCACTCTGAGTCTTCAGTATTCATGAGCTaGAATGAAAATCCTCCATTG | + |
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Preference number: 4 (lower is better) Translates to: GHTWRGRERPLIGAHSESSVFMS*NENPPL Trigger: CAATGGAGGATTTTCATTCCAGCTCATGAATACTGA...AGACTCAGAGTGCGCTCCAATGAGAGGCCTTTCCCTTCCCCTCCACGTGTGTCC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000112979.4 |
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| CDS-3UTR CCA 90 bp | ACGTGGAGGGGAAGGGAAAGGCCTCTCATTGGAGCGCACTCTGAGTCTAGGGCGATGCTTCCTTCTCAATaGTGTAAGTATAGTTCTTCT | + |
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Preference number: 4 (lower is better) Translates to: TWRGRERPLIGAHSESRAMLPSQ*CKYSSS Trigger: AGAAGAACTATACTTACACCATTGAGAAGGAAGCAT...CGCCCTAGACTCAGAGTGCGCTCCAATGAGAGGCCTTTCCCTTCCCCTCCACGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000112979.4 ENSMUST00000233947.2 |
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| CDS-3UTR TCA 90 bp | CAAAAGCTAACGTGGACACACGTGGAGGGGAAGGGAAAGGCCTCTCATTGGAGCGTTTGTCAGTATTCATaGGCTGGAATGAAAATCCTC | + |
|
Preference number: 4 (lower is better) Translates to: QKLTWTHVEGKGKASHWSVCQYS*AGMKIL Trigger: GAGGATTTTCATTCCAGCTCATGAATACTGACAAAC...GCTCCAATGAGAGGCCTTTCCCTTCCCCTCCACGTGTGTCCACGTTAGCTTTTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000112979.4 |
||
| CDS-3UTR GCA 90 bp | GACACACGTGGAGGGGAAGGGAAAGGCCTCTCATTGGAGCGCACTCTGAGTCTAGCGGAGATCTTGTTTTaGACAACAATTTTCTTTGTC | + |
|
Preference number: 4 (lower is better) Translates to: DTRGGEGKGLSLERTLSLAEILF*TTIFFV Trigger: GACAAAGAAAATTGTTGTGCAAAACAAGATCTCCGC...TAGACTCAGAGTGCGCTCCAATGAGAGGCCTTTCCCTTCCCCTCCACGTGTGTC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000112979.4 ENSMUST00000233947.2 |
||
| CDS-3UTR CCA 90 bp | CAATTTATTGGGACAAAAGCTAACGTGGACACACGTGGAGGGGAAGGGAAAGGCCAGAGAAATATATGTTaGTCCCAGGGATCTGGCCAC | + |
|
Preference number: 4 (lower is better) Translates to: QFIGTKANVDTRGGEGKGQRNIC*SQGSGH Trigger: GTGGCCAGATCCCTGGGACCAACATATATTTCTCTG...GCCTTTCCCTTCCCCTCCACGTGTGTCCACGTTAGCTTTTGTCCCAATAAATTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000112979.4 |
||
| CDS-3UTR CCA 90 bp | GTGGACACACGTGGAGGGGAAGGGAAAGGCCTCTCATTGGAGCGCACTCTGAGTACATTGTATTTATCATaGTGCTTTCCAGAAGTTCCA | + |
|
Preference number: 4 (lower is better) Translates to: VDTRGGEGKGLSLERTLSTLYLS*CFPEVP Trigger: TGGAACTTCTGGAAAGCACCATGATAAATACAATGT...ACTCAGAGTGCGCTCCAATGAGAGGCCTTTCCCTTCCCCTCCACGTGTGTCCAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000112979.4 |
||
| CDS-3UTR CCA 90 bp | GTTAACAATTTATTGGGACAAAAGCTAACGTGGACACACGTGGAGGGGAAGGGAGGTTCAGGATTCCCATaGTGCAGGCGGAGATCTTGT | + |
|
Preference number: 4 (lower is better) Translates to: VNNLLGQKLTWTHVEGKGGSGFP*CRRRSC Trigger: ACAAGATCTCCGCCTGCACCATGGGAATCCTGAACC...TCCCTTCCCCTCCACGTGTGTCCACGTTAGCTTTTGTCCCAATAAATTGTTAAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000112979.4 ENSMUST00000233947.2 |
||
| CDS-3UTR TCA 90 bp | TTCACGGTTAACAATTTATTGGGACAAAAGCTAACGTGGACACACGTGGAGGGGATGAGTACCCCCACCTaGGACATGGAATGTAAGTGG | + |
|
Preference number: 4 (lower is better) Translates to: FTVNNLLGQKLTWTHVEGMSTPT*DMECKW Trigger: CCACTTACATTCCATGTCTCAGGTGGGGGTACTCAT...CCCCTCCACGTGTGTCCACGTTAGCTTTTGTCCCAATAAATTGTTAACCGTGAA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000112979.4 |
||
| CDS-3UTR GCA 90 bp | CAATTTATTGGGACAAAAGCTAACGTGGACACACGTGGAGGGGAAGGGAAAGGCTCCATGAGAGAGGACTaGACATTCACTGTACACTTG | + |
|
Preference number: 4 (lower is better) Translates to: QFIGTKANVDTRGGEGKGSMRED*TFTVHL Trigger: CAAGTGTACAGTGAATGTGCAGTCCTCTCTCATGGA...GCCTTTCCCTTCCCCTCCACGTGTGTCCACGTTAGCTTTTGTCCCAATAAATTG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000112979.4 ENSMUST00000233947.2 |
||
| CDS-3UTR GCA 90 bp | CAATTTATTGGGACAAAAGCTAACGTGGACACACGTGGAGGGGAAGGGAAAGGCAAACTCATTGAGGTTTaGCTTAAACCCCAGGGCATG | + |
|
Preference number: 4 (lower is better) Translates to: QFIGTKANVDTRGGEGKGKLIEV*LKPQGM Trigger: CATGCCCTGGGGTTTAAGGCAAACCTCAATGAGTTT...GCCTTTCCCTTCCCCTCCACGTGTGTCCACGTTAGCTTTTGTCCCAATAAATTG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000112979.4 ENSMUST00000233947.2 |
||
| CDS-3UTR CCA 90 bp | CAAAAGCTAACGTGGACACACGTGGAGGGGAAGGGAAAGGCCTCTCATTGGAGCATGCTTCCTTCTCAATaGTGTAAGTATAGTTCTTCT | + |
|
Preference number: 4 (lower is better) Translates to: QKLTWTHVEGKGKASHWSMLPSQ*CKYSSS Trigger: AGAAGAACTATACTTACACCATTGAGAAGGAAGCAT...GCTCCAATGAGAGGCCTTTCCCTTCCCCTCCACGTGTGTCCACGTTAGCTTTTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000112979.4 ENSMUST00000233947.2 |
||
| CDS-3UTR TCA 90 bp | GTTAACAATTTATTGGGACAAAAGCTAACGTGGACACACGTGGAGGGGAAGGGACAGCTCGTAAGCATTTaGGGCAACACTGTAGATGTT | + |
|
Preference number: 4 (lower is better) Translates to: VNNLLGQKLTWTHVEGKGQLVSI*GNTVDV Trigger: AACATCTACAGTGTTGCCTCAAATGCTTACGAGCTG...TCCCTTCCCCTCCACGTGTGTCCACGTTAGCTTTTGTCCCAATAAATTGTTAAC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000112979.4 ENSMUST00000233947.2 |
||
| CDS-3UTR TCA 90 bp | AATTTATTGGGACAAAAGCTAACGTGGACACACGTGGAGGGGAAGGGAAAGGCCAGTGATGCTGCTGTTTaGGTTCAATATCCAGTTTGT | + |
|
Preference number: 4 (lower is better) Translates to: NLLGQKLTWTHVEGKGKASDAAV*VQYPVC Trigger: ACAAACTGGATATTGAACTCAAACAGCAGCATCACT...GGCCTTTCCCTTCCCCTCCACGTGTGTCCACGTTAGCTTTTGTCCCAATAAATT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000112979.4 ENSMUST00000233947.2 |
||
| CDS-3UTR TCA 90 bp | ACGGTTAACAATTTATTGGGACAAAAGCTAACGTGGACACACGTGGAGGGGAAGATGACATTACATGGTTaGAGCGCCAGCTTTTCATCC | + |
|
Preference number: 4 (lower is better) Translates to: TVNNLLGQKLTWTHVEGKMTLHG*SASFSS Trigger: GGATGAAAAGCTGGCGCTTCAACCATGTAATGTCAT...CTTCCCCTCCACGTGTGTCCACGTTAGCTTTTGTCCCAATAAATTGTTAACCGT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000233947.2 |
||
| CDS-3UTR GCA 90 bp | ACAAAAGCTAACGTGGACACACGTGGAGGGGAAGGGAAAGGCCTCTCATTGGAGTTGTATTTATCATGGTaGTTTCCAGAAGTTCCACAT | + |
|
Preference number: 4 (lower is better) Translates to: TKANVDTRGGEGKGLSLELYLSW*FPEVPH Trigger: ATGTGGAACTTCTGGAAAGCACCATGATAAATACAA...CTCCAATGAGAGGCCTTTCCCTTCCCCTCCACGTGTGTCCACGTTAGCTTTTGT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000112979.4 |
||
| CDS-3UTR CCA 90 bp | ACGGTTAACAATTTATTGGGACAAAAGCTAACGTGGACACACGTGGAGGGGAAGTGGGCTTCACCATTGTaGTTGATAGGATCGTATGCT | + |
|
Preference number: 4 (lower is better) Translates to: TVNNLLGQKLTWTHVEGKWASPL*LIGSYA Trigger: AGCATACGATCCTATCAACCACAATGGTGAAGCCCA...CTTCCCCTCCACGTGTGTCCACGTTAGCTTTTGTCCCAATAAATTGTTAACCGT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000112979.4 ENSMUST00000233947.2 |
||
| CDS-3UTR TCA 90 bp | TTCACGGTTAACAATTTATTGGGACAAAAGCTAACGTGGACACACGTGGAGGGGTGTAGCCTTTTCCACTaGTCACAAACAGTACTAGTG | + |
|
Preference number: 4 (lower is better) Translates to: FTVNNLLGQKLTWTHVEGCSLFH*SQTVLV Trigger: CACTAGTACTGTTTGTGATCAGTGGAAAAGGCTACA...CCCCTCCACGTGTGTCCACGTTAGCTTTTGTCCCAATAAATTGTTAACCGTGAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000112979.4 |
||
| CDS-3UTR TCA 90 bp | GTTAACAATTTATTGGGACAAAAGCTAACGTGGACACACGTGGAGGGGAAGGGAGTGAGAGACAGGTTCTaGTATACCTTCCAATTTACG | + |
|
Preference number: 4 (lower is better) Translates to: VNNLLGQKLTWTHVEGKGVRDRF*YTFQFT Trigger: CGTAAATTGGAAGGTATATCAGAACCTGTCTCTCAC...TCCCTTCCCCTCCACGTGTGTCCACGTTAGCTTTTGTCCCAATAAATTGTTAAC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000112979.4 |
||
| CDS-3UTR TCA 90 bp | ACGGTTAACAATTTATTGGGACAAAAGCTAACGTGGACACACGTGGAGGGGAAGAGGAGTATGAATAGGTaGCTAGTCCATTTATCTCCG | + |
|
Preference number: 4 (lower is better) Translates to: TVNNLLGQKLTWTHVEGKRSMNR*LVHLSP Trigger: CGGAGATAAATGGACTAGTCACCTATTCATACTCCT...CTTCCCCTCCACGTGTGTCCACGTTAGCTTTTGTCCCAATAAATTGTTAACCGT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000112979.4 ENSMUST00000233947.2 |
||
| CDS-3UTR TCA 90 bp | GTTAACAATTTATTGGGACAAAAGCTAACGTGGACACACGTGGAGGGGAAGGGAATTCATGAGCTGGAATaGAAATCCTCCATTGTCAGA | + |
|
Preference number: 4 (lower is better) Translates to: VNNLLGQKLTWTHVEGKGIHELE*KSSIVR Trigger: TCTGACAATGGAGGATTTTCATTCCAGCTCATGAAT...TCCCTTCCCCTCCACGTGTGTCCACGTTAGCTTTTGTCCCAATAAATTGTTAAC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000112979.4 |
||
| CDS-3UTR TCA 90 bp | AACAATTTATTGGGACAAAAGCTAACGTGGACACACGTGGAGGGGAAGGGAAAGAGTGATGCTGCTGTTTaGGTTCAATATCCAGTTTGT | + |
|
Preference number: 4 (lower is better) Translates to: NNLLGQKLTWTHVEGKGKSDAAV*VQYPVC Trigger: ACAAACTGGATATTGAACTCAAACAGCAGCATCACT...CTTTCCCTTCCCCTCCACGTGTGTCCACGTTAGCTTTTGTCCCAATAAATTGTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000112979.4 ENSMUST00000233947.2 |
||
| CDS-3UTR GCA 90 bp | AACAATTTATTGGGACAAAAGCTAACGTGGACACACGTGGAGGGGAAGGGAAAGGTCAAGAAAACTTTCTaGCCTAGATACACAGAAATG | + |
|
Preference number: 4 (lower is better) Translates to: NNLLGQKLTWTHVEGKGKVKKTF*PRYTEM Trigger: CATTTCTGTGTATCTAGGGCAGAAAGTTTTCTTGAC...CTTTCCCTTCCCCTCCACGTGTGTCCACGTTAGCTTTTGTCCCAATAAATTGTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000112979.4 |
||
| CDS GCA 90 bp | TGTTCTGGTCTTTCACCCTTCTGGGGCGCAGCCACTGTCTCAGTTTaGCACGCAGCCAGGTGCAGAAGCAGACCCCTAGGCAGAGCTGGA | + |
|
Preference number: 5 (lower is better) Translates to: CSGLSPFWGAATVSV*HAARCRSRPLGRAG Trigger: TCCAGCTCTGCCTAGGGGTCTGCTTCTGCACCTGGCTGCGTGGCAAACTGAGACAGTGGCTGCGCCCCAGAAGGGTGAAAGACCAGAACA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000112979.4 ENSMUST00000233947.2 |
||
| CDS-3UTR CAA 90 bp | CGTGGACACACGTGGAGGGGAAGGGAAAGGCCTCTCATTGGAGCGCACTCTGAGAGCAGGGGGTTGTCCTaGTTGTCTTCGTGGCAGCTG | + |
|
Preference number: 5 (lower is better) Translates to: RGHTWRGRERPLIGAHSESRGLS*LSSWQL Trigger: CAGCTGCCACGAAGACAACAAGGACAACCCCCTGCT...CTCAGAGTGCGCTCCAATGAGAGGCCTTTCCCTTCCCCTCCACGTGTGTCCACG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000112979.4 ENSMUST00000233947.2 |
||
| CDS-3UTR CAA 90 bp | TGGAGGGGAAGGGAAAGGCCTCTCATTGGAGCGCACTCTGAGTCTAGGGCGGCCTGGGCAACTCGCACCTaGCCTCTGTTCTGGTCTTTC | + |
|
Preference number: 5 (lower is better) Translates to: WRGRERPLIGAHSESRAAWATRT*PLFWSF Trigger: GAAAGACCAGAACAGAGGCAAGGTGCGAGTTGCCCA...GGCCGCCCTAGACTCAGAGTGCGCTCCAATGAGAGGCCTTTCCCTTCCCCTCCA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000112979.4 ENSMUST00000233947.2 |
||
| CDS-3UTR CAA 90 bp | CGTGGAGGGGAAGGGAAAGGCCTCTCATTGGAGCGCACTCTGAGTCTAGGGCGGCCCAGGGCATGGGGATaGCTGACCATGACATTACAT | + |
|
Preference number: 5 (lower is better) Translates to: RGGEGKGLSLERTLSLGRPRAWG*LTMTLH Trigger: ATGTAATGTCATGGTCAGCAATCCCCATGCCCTGGG...CCGCCCTAGACTCAGAGTGCGCTCCAATGAGAGGCCTTTCCCTTCCCCTCCACG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000233947.2 |
||
| CDS-3UTR CAA 90 bp | CGTGGAGGGGAAGGGAAAGGCCTCTCATTGGAGCGCACTCTGAGTCTAGGGCGGCCAGCTCGTAAGCATTaGAGGCAACACTGTAGATGT | + |
|
Preference number: 5 (lower is better) Translates to: RGGEGKGLSLERTLSLGRPARKH*RQHCRC Trigger: ACATCTACAGTGTTGCCTCAAATGCTTACGAGCTGG...CCGCCCTAGACTCAGAGTGCGCTCCAATGAGAGGCCTTTCCCTTCCCCTCCACG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000112979.4 ENSMUST00000233947.2 |
||
| CDS-3UTR CAA 90 bp | AATTTATTGGGACAAAAGCTAACGTGGACACACGTGGAGGGGAAGGGAAAGGCCCCCAGGGCATGGGGATaGCTGACCATGACCAGAGGG | + |
|
Preference number: 5 (lower is better) Translates to: NLLGQKLTWTHVEGKGKAPRAWG*LTMTRG Trigger: CCCTCTGGTCATGGTCAGCAATCCCCATGCCCTGGG...GGCCTTTCCCTTCCCCTCCACGTGTGTCCACGTTAGCTTTTGTCCCAATAAATT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENSMUST00000112979.4 |
||
| CDS-3UTR CAA 90 bp | GGACACACGTGGAGGGGAAGGGAAAGGCCTCTCATTGGAGCGCACTCTGAGTCTATGCTGGCAGTGAAGTaGAAATCTGAGTTGCCCCAG | + |
|
Preference number: 5 (lower is better) Translates to: GHTWRGRERPLIGAHSESMLAVK*KSELPQ Trigger: CTGGGGCAACTCAGATTTCAACTTCACTGCCAGCAT...AGACTCAGAGTGCGCTCCAATGAGAGGCCTTTCCCTTCCCCTCCACGTGTGTCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000112979.4 ENSMUST00000233947.2 |
||
| CDS-3UTR CAA 90 bp | GGAGGGGAAGGGAAAGGCCTCTCATTGGAGCGCACTCTGAGTCTAGGGCGGCCCGCACAACAATTTTCTTaGTCATGTCACAGCCAACTG | + |
|
Preference number: 5 (lower is better) Translates to: GGEGKGLSLERTLSLGRPAQQFS*SCHSQL Trigger: CAGTTGGCTGTGACATGACAAAGAAAATTGTTGTGC...GGGCCGCCCTAGACTCAGAGTGCGCTCCAATGAGAGGCCTTTCCCTTCCCCTCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000112979.4 ENSMUST00000233947.2 |
||
| CDS GCA 90 bp | TGTTCCAGAGGAACGGTTCTTCGTTCTCAATATCCGATTCAAAGGTaGTCCAGTTCTGGGGCTGTGACCGGCAGTTTGCAGTGGCAGCCG | + |
|
Preference number: 5 (lower is better) Translates to: CSRGTVLRSQYPIQR*SSSGAVTGSLQWQP Trigger: CGGCTGCCACTGCAAACTGCCGGTCACAGCCCCAGAACTGGAGCACCTTTGAATCGGATATTGAGAACGAAGAACCGTTCCTCTGGAACA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000112979.4 ENSMUST00000233947.2 |
||
| CDS-3UTR CAA 90 bp | AACGTGGACACACGTGGAGGGGAAGGGAAAGGCCTCTCATTGGAGCGCACTCTGCCAGCTCGTAAGCATTaGAGGCAACACTGTAGATGT | + |
|
Preference number: 5 (lower is better) Translates to: NVDTRGGEGKGLSLERTLPARKH*RQHCRC Trigger: ACATCTACAGTGTTGCCTCAAATGCTTACGAGCTGG...CAGAGTGCGCTCCAATGAGAGGCCTTTCCCTTCCCCTCCACGTGTGTCCACGTT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000112979.4 ENSMUST00000233947.2 |
||
| CDS GCA 90 bp | GAGAGAGGACTGCACATTCACTGTACACTTGTCGAAGTCATAGGCTaGAAAGTGTGGGTCAGCAACAGGGGTGAGGACCTGCAGTATGCC | + |
|
Preference number: 5 (lower is better) Translates to: ERGLHIHCTLVEVIG*KVWVSNRGEDLQYA Trigger: GGCATACTGCAGGTCCTCACCCCTGTTGCTGACCCACACTTTGCAGCCTATGACTTCGACAAGTGTACAGTGAATGTGCAGTCCTCTCTC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000112979.4 ENSMUST00000233947.2 |
||
| CDS CCA 90 bp | CCTTTTCCACTGATCACAAACAGTACTAGTGAGCCGGAGACAAAGTaGGCGCTTGTGATTGATGGCACCCCCACCGCCAATGACTTGGGA | + |
|
Preference number: 5 (lower is better) Translates to: PFPLITNSTSEPETK*ALVIDGTPTANDLG Trigger: TCCCAAGTCATTGGCGGTGGGGGTGCCATCAATCACAAGCGCCCACTTTGTCTCCGGCTCACTAGTACTGTTTGTGATCAGTGGAAAAGG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000112979.4 |
||
| CDS CCA 90 bp | CTGCACATTCACTGTACACTTGTCGAAGTCATAGGCTGCAAAGTGTaGGTCAGCAACAGGGGTGAGGACCTGCAGTATGCCGATGTCCTC | + |
|
Preference number: 5 (lower is better) Translates to: LHIHCTLVEVIGCKV*VSNRGEDLQYADVL Trigger: GAGGACATCGGCATACTGCAGGTCCTCACCCCTGTTGCTGACCCACACTTTGCAGCCTATGACTTCGACAAGTGTACAGTGAATGTGCAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000112979.4 ENSMUST00000233947.2 |
||
| CDS CCA 90 bp | AACGTATTGCCAAACTCATTGAGGTTTGCCTTAAACCCCAGGGCATaGGGATTGCTGACCATGACCAGAGGGGTAGGGTTCTCGCCCTTC | + |
|
Preference number: 5 (lower is better) Translates to: NVLPNSLRFALNPRA*GLLTMTRGVGFSPF Trigger: GAAGGGCGAGAACCCTACCCCTCTGGTCATGGTCAGCAATCCCCATGCCCTGGGGTTTAAGGCAAACCTCAATGAGTTTGGCAATACGTT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000112979.4 |
||
| CDS-3UTR CAA 90 bp | CGTGGAGGGGAAGGGAAAGGCCTCTCATTGGAGCGCACTCTGAGTCTAGGGCGGATGCAAACAGGTTATTaGATAACTCCAGGCAAAAGG | + |
|
Preference number: 5 (lower is better) Translates to: RGGEGKGLSLERTLSLGRMQTGY*ITPGKR Trigger: CCTTTTGCCTGGAGTTATCAAATAACCTGTTTGCAT...CCGCCCTAGACTCAGAGTGCGCTCCAATGAGAGGCCTTTCCCTTCCCCTCCACG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000112979.4 |
||
| CDS-3UTR CAA 90 bp | TGGAGGGGAAGGGAAAGGCCTCTCATTGGAGCGCACTCTGAGTCTAGGGCGGCCGCAGACAGTTTCAGCTaGCTATTCATGTCTATTGTA | + |
|
Preference number: 5 (lower is better) Translates to: WRGRERPLIGAHSESRAAADSFS*LFMSIV Trigger: TACAATAGACATGAATAGCAAGCTGAAACTGTCTGC...GGCCGCCCTAGACTCAGAGTGCGCTCCAATGAGAGGCCTTTCCCTTCCCCTCCA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000112979.4 |
||
| CDS CCA 90 bp | AACGGTTCTTCGTTCTCAATATCCGATTCAAAGGTGCTCCAGTTCTaGGGCTGTGACCGGCAGTTTGCAGTGGCAGCCGTCAAGGAGTAT | + |
|
Preference number: 5 (lower is better) Translates to: NGSSFSISDSKVLQF*GCDRQFAVAAVKEY Trigger: ATACTCCTTGACGGCTGCCACTGCAAACTGCCGGTCACAGCCCCAGAACTGGAGCACCTTTGAATCGGATATTGAGAACGAAGAACCGTT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000112979.4 ENSMUST00000233947.2 |
||
| CDS-3UTR CAA 90 bp | CTAACGTGGACACACGTGGAGGGGAAGGGAAAGGCCTCTCATTGGAGCGCACTCTGGGTCCCCTTGAAGTaGTATATTGGACTTAAACAC | + |
|
Preference number: 5 (lower is better) Translates to: LTWTHVEGKGKASHWSALWVPLK*YIGLKH Trigger: GTGTTTAAGTCCAATATACAACTTCAAGGGGACCCA...GAGTGCGCTCCAATGAGAGGCCTTTCCCTTCCCCTCCACGTGTGTCCACGTTAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000112979.4 |
||
| CDS-3UTR CAA 90 bp | GCTAACGTGGACACACGTGGAGGGGAAGGGAAAGGCCTCTCATTGGAGCGCACTACTTCAAGGAGATTCTaGTATGAAAAGGCTATCCCC | + |
|
Preference number: 5 (lower is better) Translates to: ANVDTRGGEGKGLSLERTTSRRF*YEKAIP Trigger: GGGGATAGCCTTTTCATACAAGAATCTCCTTGAAGT...AGTGCGCTCCAATGAGAGGCCTTTCCCTTCCCCTCCACGTGTGTCCACGTTAGC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000112979.4 |
||
| CDS-3UTR CAA 90 bp | GGACACACGTGGAGGGGAAGGGAAAGGCCTCTCATTGGAGCGCACTCTGAGTCTTGGCCAAAAATAATCTaGTTGTTTGTCTGGCCACCT | + |
|
Preference number: 5 (lower is better) Translates to: GHTWRGRERPLIGAHSESWPKII*LFVWPP Trigger: AGGTGGCCAGACAAACAACAAGATTATTTTTGGCCA...AGACTCAGAGTGCGCTCCAATGAGAGGCCTTTCCCTTCCCCTCCACGTGTGTCC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000112979.4 ENSMUST00000233947.2 |
||
| CDS TCA 90 bp | ACTTGTCGAAGTCATAGGCTGCAAAGTGTGGGTCAGCAACAGGGGTaGGGACCTGCAGTATGCCGATGTCCTCAAAGTAGATGCTTGTGT | + |
|
Preference number: 5 (lower is better) Translates to: TCRSHRLQSVGQQQG*GPAVCRCPQSRCLC Trigger: ACACAAGCATCTACTTTGAGGACATCGGCATACTGCAGGTCCTCACCCCTGTTGCTGACCCACACTTTGCAGCCTATGACTTCGACAAGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000112979.4 ENSMUST00000233947.2 |
||
| CDS-3UTR CAA 90 bp | AACGTGGACACACGTGGAGGGGAAGGGAAAGGCCTCTCATTGGAGCGCACTCTGTTGCCATCAAACGTATaGCCAAACTCATTGAGGTTT | + |
|
Preference number: 5 (lower is better) Translates to: NVDTRGGEGKGLSLERTLLPSNV*PNSLRF Trigger: AAACCTCAATGAGTTTGGCAATACGTTTGATGGCAA...CAGAGTGCGCTCCAATGAGAGGCCTTTCCCTTCCCCTCCACGTGTGTCCACGTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000112979.4 ENSMUST00000233947.2 |
||
| CDS-3UTR CAA 90 bp | GGACACACGTGGAGGGGAAGGGAAAGGCCTCTCATTGGAGCGCACTCTGAGTCTGGCGGAGATCTTGTTTaGCACAACAATTTTCTTTGT | + |
|
Preference number: 5 (lower is better) Translates to: GHTWRGRERPLIGAHSESGGDLV*HNNFLC Trigger: ACAAAGAAAATTGTTGTGCAAAACAAGATCTCCGCC...AGACTCAGAGTGCGCTCCAATGAGAGGCCTTTCCCTTCCCCTCCACGTGTGTCC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000112979.4 ENSMUST00000233947.2 |
||
| CDS-3UTR CAA 90 bp | CTAACGTGGACACACGTGGAGGGGAAGGGAAAGGCCTCTCATTGGAGCGCACTCCCAAAAATAATCTTGTaGTTTGTCTGGCCACCTAAG | + |
|
Preference number: 5 (lower is better) Translates to: LTWTHVEGKGKASHWSALPKIIL*FVWPPK Trigger: CTTAGGTGGCCAGACAAACAACAAGATTATTTTTGG...GAGTGCGCTCCAATGAGAGGCCTTTCCCTTCCCCTCCACGTGTGTCCACGTTAG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000112979.4 ENSMUST00000233947.2 |
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| CDS-3UTR CAA 90 bp | AACAATTTATTGGGACAAAAGCTAACGTGGACACACGTGGAGGGGAAGGGAAAGTGGGCAACTCGCACCTaGCCTCTGTTCTGGTCTTTC | + |
|
Preference number: 5 (lower is better) Translates to: NNLLGQKLTWTHVEGKGKWATRT*PLFWSF Trigger: GAAAGACCAGAACAGAGGCAAGGTGCGAGTTGCCCA...CTTTCCCTTCCCCTCCACGTGTGTCCACGTTAGCTTTTGTCCCAATAAATTGTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000112979.4 ENSMUST00000233947.2 |
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| CDS TCA 90 bp | TACGCCAGGTGTTCTCATAGTAATCGTAACTGTAGCCTTTTCCACTaGTCACAAACAGTACTAGTGAGCCGGAGACAAAGTGGGCGCTTG | + |
|
Preference number: 5 (lower is better) Translates to: YARCSHSNRNCSLFH*SQTVLVSRRQSGRL Trigger: CAAGCGCCCACTTTGTCTCCGGCTCACTAGTACTGTTTGTGATCAGTGGAAAAGGCTACAGTTACGATTACTATGAGAACACCTGGCGTA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000112979.4 |
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| CDS TCA 90 bp | AGAGGAGATGGCATGGCGCTTGATGCTGGCAGTGAAGTTGAAATCTaGGTTGCCCCAGTGATGCTGCTGTTTGAGTTCAATATCCAGTTT | + |
|
Preference number: 5 (lower is better) Translates to: RGDGMALDAGSEVEI*VAPVMLLFEFNIQF Trigger: AAACTGGATATTGAACTCAAACAGCAGCATCACTGGGGCAACTCAGATTTCAACTTCACTGCCAGCATCAAGCGCCATGCCATCTCCTCT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000112979.4 ENSMUST00000233947.2 |
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| CDS-3UTR CAA 90 bp | GTTAACAATTTATTGGGACAAAAGCTAACGTGGACACACGTGGAGGGGAAGGGAATGCTGGCAGTGAAGTaGAAATCTGAGTTGCCCCAG | + |
|
Preference number: 5 (lower is better) Translates to: VNNLLGQKLTWTHVEGKGMLAVK*KSELPQ Trigger: CTGGGGCAACTCAGATTTCAACTTCACTGCCAGCAT...TCCCTTCCCCTCCACGTGTGTCCACGTTAGCTTTTGTCCCAATAAATTGTTAAC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000112979.4 ENSMUST00000233947.2 |
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| CDS TCA 90 bp | CCAGAAGTTCCACATTACATGGTTGAAGCGCCAGCTTTTCATCCATaGGAGAGGACTGCACATTCACTGTACACTTGTCGAAGTCATAGG | + |
|
Preference number: 5 (lower is better) Translates to: PEVPHYMVEAPAFHP*ERTAHSLYTCRSHR Trigger: CCTATGACTTCGACAAGTGTACAGTGAATGTGCAGTCCTCTCTCATGGATGAAAAGCTGGCGCTTCAACCATGTAATGTGGAACTTCTGG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000112979.4 |
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| CDS-3UTR CAA 90 bp | CAATTTATTGGGACAAAAGCTAACGTGGACACACGTGGAGGGGAAGGGAAAGGCTGGCCAAAAATAATCTaGTTGTTTGTCTGGCCACCT | + |
|
Preference number: 5 (lower is better) Translates to: QFIGTKANVDTRGGEGKGWPKII*LFVWPP Trigger: AGGTGGCCAGACAAACAACAAGATTATTTTTGGCCA...GCCTTTCCCTTCCCCTCCACGTGTGTCCACGTTAGCTTTTGTCCCAATAAATTG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000112979.4 ENSMUST00000233947.2 |
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| CDS TCA 90 bp | TGGCGCTTGATGCTGGCAGTGAAGTTGAAATCTGAGTTGCCCCAGTaGTGCTGCTGTTTGAGTTCAATATCCAGTTTGTACTTAGAGTTG | + |
|
Preference number: 5 (lower is better) Translates to: WRLMLAVKLKSELPQ*CCCLSSISSLYLEL Trigger: CAACTCTAAGTACAAACTGGATATTGAACTCAAACAGCAGCATCACTGGGGCAACTCAGATTTCAACTTCACTGCCAGCATCAAGCGCCA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000112979.4 ENSMUST00000233947.2 |
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| CDS TCA 90 bp | TGTTTTGCACAACAATTTTCTTTGTCATGTCACAGCCAACTGAGATaGGCGTGGACAGAGGCTTTAGGTCCACACACGAAAGTGTCTTGT | + |
|
Preference number: 5 (lower is better) Translates to: CFAQQFSLSCHSQLR*AWTEALGPHTKVSC Trigger: ACAAGACACTTTCGTGTGTGGACCTAAAGCCTCTGTCCACGCTCATCTCAGTTGGCTGTGACATGACAAAGAAAATTGTTGTGCAAAACA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000112979.4 ENSMUST00000233947.2 |
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| CDS CCA 90 bp | GAAAATCCTCCATTGTCAGAGAAATATATGTTGGTCCCAGGGATCTaGCCACCACGGAGATATGCAAACAGGTTATTTGATAACTCCAGG | + |
|
Preference number: 5 (lower is better) Translates to: ENPPLSEKYMLVPGI*PPRRYANRLFDNSR Trigger: CCTGGAGTTATCAAATAACCTGTTTGCATATCTCCGTGGTGGCCAGATCCCTGGGACCAACATATATTTCTCTGACAATGGAGGATTTTC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000112979.4 |
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| CDS-3UTR CAA 90 bp | ACGGTTAACAATTTATTGGGACAAAAGCTAACGTGGACACACGTGGAGGGGAAGGCACAACAATTTTCTTaGTCATGTCACAGCCAACTG | + |
|
Preference number: 5 (lower is better) Translates to: TVNNLLGQKLTWTHVEGKAQQFS*SCHSQL Trigger: CAGTTGGCTGTGACATGACAAAGAAAATTGTTGTGC...CTTCCCCTCCACGTGTGTCCACGTTAGCTTTTGTCCCAATAAATTGTTAACCGT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000112979.4 ENSMUST00000233947.2 |
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| CDS TCA 90 bp | AAAGATCTTCTGATCTATCAGCCGCACGTGTTCAACAATCTGGCCTaGATTGGAGGACACCAATATACTTTTCTGATTCCAGAGGACCAT | + |
|
Preference number: 5 (lower is better) Translates to: KDLLIYQPHVFNNLA*IGGHQYTFLIPEDH Trigger: ATGGTCCTCTGGAATCAGAAAAGTATATTGGTGTCCTCCAATTCAGGCCAGATTGTTGAACACGTGCGGCTGATAGATCAGAAGATCTTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000112979.4 |
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| CDS TCA 90 bp | GCCTTTGAAACAACAAACGTCACCACTAATGTGAGAGACAGGTTCTaGTATACCTTCCAATTTACGCCAGGTGTTCTCATAGTAATCGTA | + |
|
Preference number: 5 (lower is better) Translates to: AFETTNVTTNVRDRF*YTFQFTPGVLIVIV Trigger: TACGATTACTATGAGAACACCTGGCGTAAATTGGAAGGTATATCAGAACCTGTCTCTCACATTAGTGGTGACGTTTGTTGTTTCAAAGGC 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000112979.4 |
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| CDS CCA 90 bp | AAACATTGTATTTATCATGGTGCTTTCCAGAAGTTCCACATTACATaGTTGAAGCGCCAGCTTTTCATCCATGAGAGAGGACTGCACATT | + |
|
Preference number: 5 (lower is better) Translates to: KHCIYHGAFQKFHIT*LKRQLFIHERGLHI Trigger: AATGTGCAGTCCTCTCTCATGGATGAAAAGCTGGCGCTTCAACCATGTAATGTGGAACTTCTGGAAAGCACCATGATAAATACAATGTTT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000112979.4 |
||
| CDS TCA 72 bp | TTCCCGGTCCTCACTGTGTGCACCCGGCACAGTGTGTaGGCCCTGACCATGGTGGCCACTGCTGCTGCTAGC | + |
|
Preference number: 6 (lower is better) Translates to: FPVLTVCTRHSV*ALTMVATAAAS Trigger: GCTAGCAGCAGCAGTGGCCACCATGGTCAGGGCTCACACACTGTGCCGGGTGCACACAGTGAGGACCGGGAA 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000112979.4 |
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| CDS CAA 90 bp | CTGTTCTGGTCTTTCACCCTTCTGGGGCGCAGCCACTGTCTCAGTTaGCCACGCAGCCAGGTGCAGAAGCAGACCCCTAGGCAGAGCTGG | + |
|
Preference number: 6 (lower is better) Translates to: LFWSFTLLGRSHCLS*PRSQVQKQTPRQSW Trigger: CCAGCTCTGCCTAGGGGTCTGCTTCTGCACCTGGCTGCGTGGCAAACTGAGACAGTGGCTGCGCCCCAGAAGGGTGAAAGACCAGAACAG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000112979.4 ENSMUST00000233947.2 |
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| CDS GCA 72 bp | GGCGCAGCCACTGTCTCAGTTTGCCACGCAGCCAGGTaGAGAAGCAGACCCCTAGGCAGAGCTGGAGTATCT | + |
|
Preference number: 6 (lower is better) Translates to: GAATVSVCHAAR*RSRPLGRAGVS Trigger: AGATACTCCAGCTCTGCCTAGGGGTCTGCTTCTGCACCTGGCTGCGTGGCAAACTGAGACAGTGGCTGCGCC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000112979.4 ENSMUST00000233947.2 |
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| CDS CAA 72 bp | TCTTTCACCCTTCTGGGGCGCAGCCACTGTCTCAGTTaGCCACGCAGCCAGGTGCAGAAGCAGACCCCTAGG | + |
|
Preference number: 6 (lower is better) Translates to: SFTLLGRSHCLS*PRSQVQKQTPR Trigger: CCTAGGGGTCTGCTTCTGCACCTGGCTGCGTGGCAAACTGAGACAGTGGCTGCGCCCCAGAAGGGTGAAAGA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000112979.4 ENSMUST00000233947.2 |
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| CDS TCA 72 bp | TCCTCACTGTGTGCACCCGGCACAGTGTGTGAGCCCTaGCCATGGTGGCCACTGCTGCTGCTAGCATCAACA | + |
|
Preference number: 6 (lower is better) Translates to: SSLCAPGTVCEP*PWWPLLLLAST Trigger: TGTTGATGCTAGCAGCAGCAGTGGCCACCATGGTCAGGGCTCACACACTGTGCCGGGTGCACACAGTGAGGA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000112979.4 |
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| CDS TCA 72 bp | TTGATGGCACCCCCACCGCCAATGACTTGGGAACGGTaGGCGGCAAGAGGCTGGACTCAAAGTTGTCTATCG | + |
|
Preference number: 6 (lower is better) Translates to: LMAPPPPMTWER*AARGWTQSCLS Trigger: CGATAGACAACTTTGAGTCCAGCCTCTTGCCGCTCACCGTTCCCAAGTCATTGGCGGTGGGGGTGCCATCAA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000112979.4 |
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| CDS TCA 72 bp | ACAGTACTAGTGAGCCGGAGACAAAGTGGGCGCTTGTaGTTGATGGCACCCCCACCGCCAATGACTTGGGAA | + |
|
Preference number: 6 (lower is better) Translates to: TVLVSRRQSGRL*LMAPPPPMTWE Trigger: TTCCCAAGTCATTGGCGGTGGGGGTGCCATCAATCACAAGCGCCCACTTTGTCTCCGGCTCACTAGTACTGT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000112979.4 |
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| CDS CCA 72 bp | TCGTTCTCAATATCCGATTCAAAGGTGCTCCAGTTCTaGGGCTGTGACCGGCAGTTTGCAGTGGCAGCCGTC | + |
|
Preference number: 6 (lower is better) Translates to: SFSISDSKVLQF*GCDRQFAVAAV Trigger: GACGGCTGCCACTGCAAACTGCCGGTCACAGCCCCAGAACTGGAGCACCTTTGAATCGGATATTGAGAACGA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000112979.4 ENSMUST00000233947.2 |
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| CDS CCA 72 bp | CACTGTACACTTGTCGAAGTCATAGGCTGCAAAGTGTaGGTCAGCAACAGGGGTGAGGACCTGCAGTATGCC | + |
|
Preference number: 6 (lower is better) Translates to: HCTLVEVIGCKV*VSNRGEDLQYA Trigger: GGCATACTGCAGGTCCTCACCCCTGTTGCTGACCCACACTTTGCAGCCTATGACTTCGACAAGTGTACAGTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000112979.4 ENSMUST00000233947.2 |
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| CDS CCA 72 bp | CCAAACTCATTGAGGTTTGCCTTAAACCCCAGGGCATaGGGATTGCTGACCATGACCAGAGGGGTAGGGTTC | + |
|
Preference number: 6 (lower is better) Translates to: PNSLRFALNPRA*GLLTMTRGVGF Trigger: GAACCCTACCCCTCTGGTCATGGTCAGCAATCCCCATGCCCTGGGGTTTAAGGCAAACCTCAATGAGTTTGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000112979.4 |
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| CDS CAA 90 bp | GAGATGAGCGTGGACAGAGGCTTTAGGTCCACACACGAAAGTGTCTaGTCAGCTATGTCCACGGTTACAGAGGAGATGGCATGGCGCTTG | + |
|
Preference number: 6 (lower is better) Translates to: EMSVDRGFRSTHESV*SAMSTVTEEMAWRL Trigger: CAAGCGCCATGCCATCTCCTCTGTAACCGTGGACATAGCTGACAAGACACTTTCGTGTGTGGACCTAAAGCCTCTGTCCACGCTCATCTC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000112979.4 ENSMUST00000233947.2 |
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| CDS TCA 72 bp | AGTCATAGGCTGCAAAGTGTGGGTCAGCAACAGGGGTaGGGACCTGCAGTATGCCGATGTCCTCAAAGTAGA | + |
|
Preference number: 6 (lower is better) Translates to: SHRLQSVGQQQG*GPAVCRCPQSR Trigger: TCTACTTTGAGGACATCGGCATACTGCAGGTCCTCACCCCTGTTGCTGACCCACACTTTGCAGCCTATGACT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000112979.4 ENSMUST00000233947.2 |
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| CDS GCA 72 bp | GGAACGGTTCTTCGTTCTCAATATCCGATTCAAAGGTaGTCCAGTTCTGGGGCTGTGACCGGCAGTTTGCAG | + |
|
Preference number: 6 (lower is better) Translates to: GTVLRSQYPIQR*SSSGAVTGSLQ Trigger: CTGCAAACTGCCGGTCACAGCCCCAGAACTGGAGCACCTTTGAATCGGATATTGAGAACGAAGAACCGTTCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000112979.4 ENSMUST00000233947.2 |
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| CDS CAA 72 bp | GCTATGTCCACGGTTACAGAGGAGATGGCATGGCGCTaGATGCTGGCAGTGAAGTTGAAATCTGAGTTGCCC | + |
|
Preference number: 6 (lower is better) Translates to: AMSTVTEEMAWR*MLAVKLKSELP Trigger: GGGCAACTCAGATTTCAACTTCACTGCCAGCATCAAGCGCCATGCCATCTCCTCTGTAACCGTGGACATAGC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000112979.4 ENSMUST00000233947.2 |
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| CDS CAA 72 bp | GTGGACAGAGGCTTTAGGTCCACACACGAAAGTGTCTaGTCAGCTATGTCCACGGTTACAGAGGAGATGGCA | + |
|
Preference number: 6 (lower is better) Translates to: VDRGFRSTHESV*SAMSTVTEEMA Trigger: TGCCATCTCCTCTGTAACCGTGGACATAGCTGACAAGACACTTTCGTGTGTGGACCTAAAGCCTCTGTCCAC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000112979.4 ENSMUST00000233947.2 |
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| CDS TCA 72 bp | GGCATGGCGCTTGATGCTGGCAGTGAAGTTGAAATCTaGGTTGCCCCAGTGATGCTGCTGTTTGAGTTCAAT | + |
|
Preference number: 6 (lower is better) Translates to: GMALDAGSEVEI*VAPVMLLFEFN Trigger: ATTGAACTCAAACAGCAGCATCACTGGGGCAACTCAGATTTCAACTTCACTGCCAGCATCAAGCGCCATGCC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000112979.4 ENSMUST00000233947.2 |
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| CDS TCA 72 bp | ATAGCAGGGGGTTGTCCTTGTTGTCTTCGTGGCAGCTaGCATAGTTCTCTCTGTTCCAGAGGAACGGTTCTT | + |
|
Preference number: 6 (lower is better) Translates to: IAGGCPCCLRGS*HSSLCSRGTVL Trigger: AAGAACCGTTCCTCTGGAACAGAGAGAACTATGTCAGCTGCCACGAAGACAACAAGGACAACCCCCTGCTAT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000112979.4 ENSMUST00000233947.2 |
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| CDS GCA 72 bp | GTACCCCCACCTGAGACATGGAATGTAAGTGGAAGATaGCTCCTAGTGTTCCTGTCAGGTGACTCAGTTTGT | + |
|
Preference number: 6 (lower is better) Translates to: VPPPETWNVSGR*LLVFLSGDSVC Trigger: ACAAACTGAGTCACCTGACAGGAACACTAGGAGGCATCTTCCACTTACATTCCATGTCTCAGGTGGGGGTAC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000112979.4 |
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| CDS CCA 72 bp | TTGTCAGCTATGTCCACGGTTACAGAGGAGATGGCATaGCGCTTGATGCTGGCAGTGAAGTTGAAATCTGAG | + |
|
Preference number: 6 (lower is better) Translates to: LSAMSTVTEEMA*RLMLAVKLKSE Trigger: CTCAGATTTCAACTTCACTGCCAGCATCAAGCGCCATGCCATCTCCTCTGTAACCGTGGACATAGCTGACAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000112979.4 ENSMUST00000233947.2 |
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| CDS CCA 72 bp | AGTTCTTCTGCAGCTGCACGGGGTTCAGGATTCCCATaGTGCAGGCGGAGATCTTGTTTTGCACAACAATTT | + |
|
Preference number: 6 (lower is better) Translates to: SSSAAARGSGFP*CRRRSCFAQQF Trigger: AAATTGTTGTGCAAAACAAGATCTCCGCCTGCACCATGGGAATCCTGAACCCCGTGCAGCTGCAGAAGAACT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000112979.4 ENSMUST00000233947.2 |
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| CDS CAA 72 bp | GTTGGGGAAGGCGTAGAACAGTGGGTCCCCTTGAAGTaGTATATTGGACTTAAACACTTTCCCGGTCCTCAC | + |
|
Preference number: 6 (lower is better) Translates to: VGEGVEQWVPLK*YIGLKHFPGPH Trigger: GTGAGGACCGGGAAAGTGTTTAAGTCCAATATACAACTTCAAGGGGACCCACTGTTCTACGCCTTCCCCAAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000112979.4 |
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| CDS CAA 90 bp | CACAAATGTGTTGGGGAAGGCGTAGAACAGTGGGTCCCCTTGAAGTaGTATATTGGACTTAAACACTTTCCCGGTCCTCACTGTGTGCAC | + |
|
Preference number: 6 (lower is better) Translates to: HKCVGEGVEQWVPLK*YIGLKHFPGPHCVH Trigger: GTGCACACAGTGAGGACCGGGAAAGTGTTTAAGTCCAATATACAACTTCAAGGGGACCCACTGTTCTACGCCTTCCCCAACACATTTGTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000112979.4 |
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| CDS GCA 72 bp | GTTGCCATCAAACGTATTGCCAAACTCATTGAGGTTTaGCTTAAACCCCAGGGCATGGGGATTGCTGACCAT | + |
|
Preference number: 6 (lower is better) Translates to: VAIKRIAKLIEV*LKPQGMGIADH Trigger: ATGGTCAGCAATCCCCATGCCCTGGGGTTTAAGGCAAACCTCAATGAGTTTGGCAATACGTTTGATGGCAAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000112979.4 ENSMUST00000233947.2 |
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| CDS CAA 90 bp | CTTGAGCACAAATGTGTTGGGGAAGGCGTAGAACAGTGGGTCCCCTaGAAGTTGTATATTGGACTTAAACACTTTCCCGGTCCTCACTGT | + |
|
Preference number: 6 (lower is better) Translates to: LEHKCVGEGVEQWVP*KLYIGLKHFPGPHC Trigger: ACAGTGAGGACCGGGAAAGTGTTTAAGTCCAATATACAACTTCAAGGGGACCCACTGTTCTACGCCTTCCCCAACACATTTGTGCTCAAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000112979.4 |
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| CDS CAA 90 bp | TCCAGTTTGTACTTAGAGTTGCCATCAAACGTATTGCCAAACTCATaGAGGTTTGCCTTAAACCCCAGGGCATGGGGATTGCTGACCATG | + |
|
Preference number: 6 (lower is better) Translates to: SSLYLELPSNVLPNS*RFALNPRAWGLLTM Trigger: CATGGTCAGCAATCCCCATGCCCTGGGGTTTAAGGCAAACCTCAATGAGTTTGGCAATACGTTTGATGGCAACTCTAAGTACAAACTGGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000112979.4 ENSMUST00000233947.2 |
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| CDS TCA 72 bp | CCACATTACATGGTTGAAGCGCCAGCTTTTCATCCATaGGAGAGGACTGCACATTCACTGTACACTTGTCGA | + |
|
Preference number: 6 (lower is better) Translates to: PHYMVEAPAFHP*ERTAHSLYTCR Trigger: TCGACAAGTGTACAGTGAATGTGCAGTCCTCTCTCATGGATGAAAAGCTGGCGCTTCAACCATGTAATGTGG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000112979.4 |
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| CDS TCA 72 bp | ATCATGGTGCTTTCCAGAAGTTCCACATTACATGGTTaGAGCGCCAGCTTTTCATCCATGAGAGAGGACTGC | + |
|
Preference number: 6 (lower is better) Translates to: IMVLSRSSTLHG*SASFSSMREDC Trigger: GCAGTCCTCTCTCATGGATGAAAAGCTGGCGCTTCAACCATGTAATGTGGAACTTCTGGAAAGCACCATGAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000112979.4 |
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| CDS TCA 72 bp | GTGCCCAAATTATTTTCAACCATGAGTACCCCCACCTaGGACATGGAATGTAAGTGGAAGATGCCTCCTAGT | + |
|
Preference number: 6 (lower is better) Translates to: VPKLFSTMSTPT*DMECKWKMPPS Trigger: ACTAGGAGGCATCTTCCACTTACATTCCATGTCTCAGGTGGGGGTACTCATGGTTGAAAATAATTTGGGCAC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000112979.4 |
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| CDS TCA 72 bp | ATCTGGCCTGAATTGGAGGACACCAATATACTTTTCTaGTTCCAGAGGACCATAAACCCCCTCTGGTATGGT | + |
|
Preference number: 6 (lower is better) Translates to: IWPELEDTNILF*FQRTINPLWYG Trigger: ACCATACCAGAGGGGGTTTATGGTCCTCTGGAATCAGAAAAGTATATTGGTGTCCTCCAATTCAGGCCAGAT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000112979.4 |
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| CDS TCA 72 bp | CAACAATTTTCTTTGTCATGTCACAGCCAACTGAGATaGGCGTGGACAGAGGCTTTAGGTCCACACACGAAA | + |
|
Preference number: 6 (lower is better) Translates to: QQFSLSCHSQLR*AWTEALGPHTK Trigger: TTTCGTGTGTGGACCTAAAGCCTCTGTCCACGCTCATCTCAGTTGGCTGTGACATGACAAAGAAAATTGTTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000112979.4 ENSMUST00000233947.2 |
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| CDS CCA 72 bp | CTATCAGCCGCACGTGTTCAACAATCTGGCCTGAATTaGAGGACACCAATATACTTTTCTGATTCCAGAGGA | + |
|
Preference number: 6 (lower is better) Translates to: LSAARVQQSGLN*RTPIYFSDSRG Trigger: TCCTCTGGAATCAGAAAAGTATATTGGTGTCCTCCAATTCAGGCCAGATTGTTGAACACGTGCGGCTGATAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000112979.4 |
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| CDS CAA 72 bp | AAATGTGTTGGGGAAGGCGTAGAACAGTGGGTCCCCTaGAAGTTGTATATTGGACTTAAACACTTTCCCGGT | + |
|
Preference number: 6 (lower is better) Translates to: KCVGEGVEQWVP*KLYIGLKHFPG Trigger: ACCGGGAAAGTGTTTAAGTCCAATATACAACTTCAAGGGGACCCACTGTTCTACGCCTTCCCCAACACATTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000112979.4 |
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| CDS CAA 72 bp | TATCATGGTGCTTTCCAGAAGTTCCACATTACATGGTaGAAGCGCCAGCTTTTCATCCATGAGAGAGGACTG | + |
|
Preference number: 6 (lower is better) Translates to: YHGAFQKFHITW*KRQLFIHERGL Trigger: CAGTCCTCTCTCATGGATGAAAAGCTGGCGCTTCAACCATGTAATGTGGAACTTCTGGAAAGCACCATGATA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000112979.4 |
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| CDS CAA 72 bp | TACTTAGAGTTGCCATCAAACGTATTGCCAAACTCATaGAGGTTTGCCTTAAACCCCAGGGCATGGGGATTG | + |
|
Preference number: 6 (lower is better) Translates to: YLELPSNVLPNS*RFALNPRAWGL Trigger: CAATCCCCATGCCCTGGGGTTTAAGGCAAACCTCAATGAGTTTGGCAATACGTTTGATGGCAACTCTAAGTA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000112979.4 ENSMUST00000233947.2 |
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| CDS CAA 90 bp | TTCATGAGCTGGAATGAAAATCCTCCATTGTCAGAGAAATATATGTaGGTCCCAGGGATCTGGCCACCACGGAGATATGCAAACAGGTTA | + |
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Preference number: 6 (lower is better) Translates to: FMSWNENPPLSEKYM*VPGIWPPRRYANRL Trigger: TAACCTGTTTGCATATCTCCGTGGTGGCCAGATCCCTGGGACCAACATATATTTCTCTGACAATGGAGGATTTTCATTCCAGCTCATGAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000112979.4 |
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| CDS TCA 72 bp | ATGCTGGCAGTGAAGTTGAAATCTGAGTTGCCCCAGTaGTGCTGCTGTTTGAGTTCAATATCCAGTTTGTAC | + |
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Preference number: 6 (lower is better) Translates to: MLAVKLKSELPQ*CCCLSSISSLY Trigger: GTACAAACTGGATATTGAACTCAAACAGCAGCATCACTGGGGCAACTCAGATTTCAACTTCACTGCCAGCAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000112979.4 ENSMUST00000233947.2 |
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| CDS GCA 72 bp | TTCAGGATTCCCATGGTGCAGGCGGAGATCTTGTTTTaGACAACAATTTTCTTTGTCATGTCACAGCCAACT | + |
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Preference number: 6 (lower is better) Translates to: FRIPMVQAEILF*TTIFFVMSQPT Trigger: AGTTGGCTGTGACATGACAAAGAAAATTGTTGTGCAAAACAAGATCTCCGCCTGCACCATGGGAATCCTGAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000112979.4 ENSMUST00000233947.2 |
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| CDS CAA 90 bp | TTGAGTTCAATATCCAGTTTGTACTTAGAGTTGCCATCAAACGTATaGCCAAACTCATTGAGGTTTGCCTTAAACCCCAGGGCATGGGGA | + |
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Preference number: 6 (lower is better) Translates to: LSSISSLYLELPSNV*PNSLRFALNPRAWG Trigger: TCCCCATGCCCTGGGGTTTAAGGCAAACCTCAATGAGTTTGGCAATACGTTTGATGGCAACTCTAAGTACAAACTGGATATTGAACTCAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000112979.4 ENSMUST00000233947.2 |
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| CDS TCA 72 bp | TGTTCTCATAGTAATCGTAACTGTAGCCTTTTCCACTaGTCACAAACAGTACTAGTGAGCCGGAGACAAAGT | + |
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Preference number: 6 (lower is better) Translates to: CSHSNRNCSLFH*SQTVLVSRRQS Trigger: ACTTTGTCTCCGGCTCACTAGTACTGTTTGTGATCAGTGGAAAAGGCTACAGTTACGATTACTATGAGAACA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000112979.4 |
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| CDS TCA 72 bp | ACAACAAACGTCACCACTAATGTGAGAGACAGGTTCTaGTATACCTTCCAATTTACGCCAGGTGTTCTCATA | + |
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Preference number: 6 (lower is better) Translates to: TTNVTTNVRDRF*YTFQFTPGVLI Trigger: TATGAGAACACCTGGCGTAAATTGGAAGGTATATCAGAACCTGTCTCTCACATTAGTGGTGACGTTTGTTGT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000112979.4 |
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| CDS TCA 72 bp | AAGGAGCCTTTGAAACAACAAACGTCACCACTAATGTaGGAGACAGGTTCTGATATACCTTCCAATTTACGC | + |
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Preference number: 6 (lower is better) Translates to: KEPLKQQTSPLM*ETGSDIPSNLR Trigger: GCGTAAATTGGAAGGTATATCAGAACCTGTCTCTCACATTAGTGGTGACGTTTGTTGTTTCAAAGGCTCCTT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000112979.4 |
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| CDS TCA 72 bp | GTGTTCCTGTCAGGTGACTCAGTTTGTCAGTATTCATaGGCTGGAATGAAAATCCTCCATTGTCAGAGAAAT | + |
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Preference number: 6 (lower is better) Translates to: VFLSGDSVCQYS*AGMKILHCQRN Trigger: ATTTCTCTGACAATGGAGGATTTTCATTCCAGCTCATGAATACTGACAAACTGAGTCACCTGACAGGAACAC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000112979.4 |
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| CDS TCA 72 bp | CCATGTAATGAAATGTGCCCAAATTATTTTCAACCATaGGTACCCCCACCTGAGACATGGAATGTAAGTGGA | + |
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Preference number: 6 (lower is better) Translates to: PCNEMCPNYFQP*VPPPETWNVSG Trigger: TCCACTTACATTCCATGTCTCAGGTGGGGGTACTCATGGTTGAAAATAATTTGGGCACATTTCATTACATGG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000112979.4 |
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| CDS CAA 72 bp | TTGTCAGTATTCATGAGCTGGAATGAAAATCCTCCATaGTCAGAGAAATATATGTTGGTCCCAGGGATCTGG | + |
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Preference number: 6 (lower is better) Translates to: LSVFMSWNENPP*SEKYMLVPGIW Trigger: CCAGATCCCTGGGACCAACATATATTTCTCTGACAATGGAGGATTTTCATTCCAGCTCATGAATACTGACAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000112979.4 |
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| CDS CAA 72 bp | CCCTTCCGGGGTATCATGAGGGCAGACAGTTTCAGCTaGCTATTCATGTCTATTGTAAACATTGTATTTATC | + |
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Preference number: 6 (lower is better) Translates to: PFRGIMRADSFS*LFMSIVNIVFI Trigger: GATAAATACAATGTTTACAATAGACATGAATAGCAAGCTGAAACTGTCTGCCCTCATGATACCCCGGAAGGG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000112979.4 |
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| CDS CAA 72 bp | ATATCCAGTTTGTACTTAGAGTTGCCATCAAACGTATaGCCAAACTCATTGAGGTTTGCCTTAAACCCCAGG | + |
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Preference number: 6 (lower is better) Translates to: ISSLYLELPSNV*PNSLRFALNPR Trigger: CCTGGGGTTTAAGGCAAACCTCAATGAGTTTGGCAATACGTTTGATGGCAACTCTAAGTACAAACTGGATAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000112979.4 ENSMUST00000233947.2 |
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| CDS CAA 72 bp | TACCACAGACAGATGGAAGGTATAGATCCCATTTCTTaGGCCAAAAATAATCTTGTTGTTTGTCTGGCCACC | + |
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Preference number: 6 (lower is better) Translates to: YHRQMEGIDPIS*AKNNLVVCLAT Trigger: GGTGGCCAGACAAACAACAAGATTATTTTTGGCCAAAGAAATGGGATCTATACCTTCCATCTGTCTGTGGTA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000112979.4 ENSMUST00000233947.2 |
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| CDS TCA 72 bp | GTATGGTTTCATAATGACTTCAAGGAGATTCTTGTATaGAAAGGCTATCCCCATACTATGGTTCAGGGGGTA | + |
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Preference number: 6 (lower is better) Translates to: VWFHNDFKEILV*KGYPHTMVQGV Trigger: TACCCCCTGAACCATAGTATGGGGATAGCCTTTTCATACAAGAATCTCCTTGAAGTCATTATGAAACCATAC 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000112979.4 |
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| CDS CAA 72 bp | CTCTGGTATGGTTTCATAATGACTTCAAGGAGATTCTaGTATGAAAAGGCTATCCCCATACTATGGTTCAGG | + |
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Preference number: 6 (lower is better) Translates to: LWYGFIMTSRRF*YEKAIPILWFR Trigger: CCTGAACCATAGTATGGGGATAGCCTTTTCATACAAGAATCTCCTTGAAGTCATTATGAAACCATACCAGAG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000112979.4 |
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