Pregenerated sensors for CATSPER4 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000048003Ensembl transcript IDs: ENSMUST00000055892.10, ENSMUST00000105878.3, ENSMUST00000169381.8
Found 95 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | TTTCCAGCCCCATGGCCTCTGCCGCCCGGGTGTAAGGGAGAGGGATaGGCTCCAGTCTGGGATGCAGCAGCTGGCCCAGTGTGTGCAGGC | + |
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Preference number: 1 (lower is better) Translates to: FPAPWPLPPGCKGEG*APVWDAAAGPVCAG Trigger: GCCTGCACACACTGGGCCAGCTGCTGCATCCCAGACTGGAGCCCATCCCTCTCCCTTACACCCGGGCGGCAGAGGCCATGGGGCTGGAAA 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000055892.10 ENSMUST00000169381.8 |
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| 3UTR GCA 90 bp | TTTTTGGTGCACACGGTCTCACTGGCCTGGCTCTTCTCTTTCTGGTaGTTGGGCCCAGGCAGGCCTCATCCAGCTCTGGCTGATGCAGAC | + |
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Preference number: 1 (lower is better) Translates to: FLVHTVSLAWLFSFW*LGPGRPHPALADAD Trigger: GTCTGCATCAGCCAGAGCTGGATGAGGCCTGCCTGGGCCCAAGCACCAGAAAGAGAAGAGCCAGGCCAGTGAGACCGTGTGCACCAAAAA 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000055892.10 ENSMUST00000169381.8 |
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| 3UTR-3UTR CCA 90 bp | CCTGGCTCTTCTCTTTCTGGTGCTTGGGCCCAGGCAGGCCTCATCCAGCTCTGGACCTTTCCAGCCCCATaGCCTCTGCCGCCCGGGTGT | + |
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Preference number: 2 (lower is better) Translates to: PGSSLSGAWAQAGLIQLWTFPAP*PLPPGC Trigger: ACACCCGGGCGGCAGAGGCCATGGGGCTGGAAAGGT...CCAGAGCTGGATGAGGCCTGCCTGGGCCCAAGCACCAGAAAGAGAAGAGCCAGG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000055892.10 ENSMUST00000169381.8 |
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| 3UTR-3UTR CCA 90 bp | ACGGTCTCACTGGCCTGGCTCTTCTCTTTCTGGTGCTTGGGCCCAGGCAGGCCTACCTTTCCAGCCCCATaGCCTCTGCCGCCCGGGTGT | + |
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Preference number: 2 (lower is better) Translates to: TVSLAWLFSFWCLGPGRPTFPAP*PLPPGC Trigger: ACACCCGGGCGGCAGAGGCCATGGGGCTGGAAAGGT...AGGCCTGCCTGGGCCCAAGCACCAGAAAGAGAAGAGCCAGGCCAGTGAGACCGT 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000055892.10 ENSMUST00000169381.8 |
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| 3UTR-3UTR GCA 90 bp | GCCTGGCTCTTCTCTTTCTGGTGCTTGGGCCCAGGCAGGCCTCATCCAGCTCTGGGCTCCAGTCTGGGATaGAGCAGCTGGCCCAGTGTG | + |
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Preference number: 2 (lower is better) Translates to: AWLFSFWCLGPGRPHPALGSSLG*SSWPSV Trigger: CACACTGGGCCAGCTGCTGCATCCCAGACTGGAGCC...CAGAGCTGGATGAGGCCTGCCTGGGCCCAAGCACCAGAAAGAGAAGAGCCAGGC 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000055892.10 ENSMUST00000169381.8 |
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| 3UTR-3UTR GCA 90 bp | CCTGGCTCTTCTCTTTCTGGTGCTTGGGCCCAGGCAGGCCTCATCCAGCTCTGGAGCTGGCCCAGTGTGTaGAGGCCCTCCAGTTCCCAT | + |
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Preference number: 2 (lower is better) Translates to: PGSSLSGAWAQAGLIQLWSWPSV*RPSSSH Trigger: ATGGGAACTGGAGGGCCTGCACACACTGGGCCAGCT...CCAGAGCTGGATGAGGCCTGCCTGGGCCCAAGCACCAGAAAGAGAAGAGCCAGG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000055892.10 ENSMUST00000169381.8 |
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| 3UTR-3UTR GCA 90 bp | GCCTGGCTCTTCTCTTTCTGGTGCTTGGGCCCAGGCAGGCCTCATCCAGCTCTGAAGCCCTGCAGATGCTaGCACCTTTCCAGCCCCATG | + |
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Preference number: 2 (lower is better) Translates to: AWLFSFWCLGPGRPHPALKPCRC*HLSSPM Trigger: CATGGGGCTGGAAAGGTGGCAGCATCTGCAGGGCTT...CAGAGCTGGATGAGGCCTGCCTGGGCCCAAGCACCAGAAAGAGAAGAGCCAGGC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000055892.10 ENSMUST00000169381.8 |
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| 3UTR-3UTR CCA 90 bp | CTCACTGGCCTGGCTCTTCTCTTTCTGGTGCTTGGGCCCAGGCAGGCCTCATCCTGTAAGGGAGAGGGATaGGCTCCAGTCTGGGATGCA | + |
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Preference number: 2 (lower is better) Translates to: LTGLALLFLVLGPRQASSCKGEG*APVWDA Trigger: TGCATCCCAGACTGGAGCCCATCCCTCTCCCTTACA...GGATGAGGCCTGCCTGGGCCCAAGCACCAGAAAGAGAAGAGCCAGGCCAGTGAG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000055892.10 ENSMUST00000169381.8 |
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| 3UTR-3UTR CCA 90 bp | TGCACACGGTCTCACTGGCCTGGCTCTTCTCTTTCTGGTGCTTGGGCCCAGGCAGGCCTCATCCAGCTCTaGCTGATGCAGACAGAGGTC | + |
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Preference number: 2 (lower is better) Translates to: CTRSHWPGSSLSGAWAQAGLIQL*LMQTEV Trigger: GACCTCTGTCTGCATCAGCCAGAGCTGGATGAGGCC...TGCCTGGGCCCAAGCACCAGAAAGAGAAGAGCCAGGCCAGTGAGACCGTGTGCA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000055892.10 ENSMUST00000169381.8 |
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| 3UTR CCA 72 bp | CCGCCCGGGTGTAAGGGAGAGGGATGGGCTCCAGTCTaGGATGCAGCAGCTGGCCCAGTGTGTGCAGGCCCT | + |
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Preference number: 3 (lower is better) Translates to: PPGCKGEGWAPV*DAAAGPVCAGP Trigger: AGGGCCTGCACACACTGGGCCAGCTGCTGCATCCCAGACTGGAGCCCATCCCTCTCCCTTACACCCGGGCGG 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000055892.10 ENSMUST00000169381.8 |
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| 3UTR CCA 72 bp | CGGTCTCACTGGCCTGGCTCTTCTCTTTCTGGTGCTTaGGCCCAGGCAGGCCTCATCCAGCTCTGGCTGATG | + |
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Preference number: 3 (lower is better) Translates to: RSHWPGSSLSGA*AQAGLIQLWLM Trigger: CATCAGCCAGAGCTGGATGAGGCCTGCCTGGGCCCAAGCACCAGAAAGAGAAGAGCCAGGCCAGTGAGACCG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000055892.10 ENSMUST00000169381.8 |
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| 3UTR-3UTR CAA 90 bp | TTCTCTTTCTGGTGCTTGGGCCCAGGCAGGCCTCATCCAGCTCTGGCTGATGCACCGACTCCTCCGGACTaGAGGCTCCTGGGCATAAGC | + |
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Preference number: 3 (lower is better) Translates to: FSFWCLGPGRPHPALADAPTPPD*RLLGIS Trigger: GCTTATGCCCAGGAGCCTCAAGTCCGGAGGAGTCGG...TGCATCAGCCAGAGCTGGATGAGGCCTGCCTGGGCCCAAGCACCAGAAAGAGAA 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000055892.10 ENSMUST00000169381.8 |
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| 3UTR CCA 72 bp | AAAAGTTTATTTTTGGTGCACACGGTCTCACTGGCCTaGCTCTTCTCTTTCTGGTGCTTGGGCCCAGGCAGG | + |
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Preference number: 3 (lower is better) Translates to: KSLFLVHTVSLA*LFSFWCLGPGR Trigger: CCTGCCTGGGCCCAAGCACCAGAAAGAGAAGAGCCAGGCCAGTGAGACCGTGTGCACCAAAAATAAACTTTT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000055892.10 ENSMUST00000169381.8 |
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| 3UTR-3UTR CAA 90 bp | TGCCCTCTTCTGGTGTGTCTGAGGAGAGCAACAGTTTTCACATACATAAAACCTTGGTCTCTGCCCACTTaGAGGCAGGGTCTTGTCTTG | + |
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Preference number: 3 (lower is better) Translates to: CPLLVCLRRATVFTYIKPWSLPT*RQGLVL Trigger: CAAGACAAGACCCTGCCTCAAAGTGGGCAGAGACCA...AGGTTTTATGTATGTGAAAACTGTTGCTCTCCTCAGACACACCAGAAGAGGGCA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000105878.3 |
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| 3UTR-3UTR CAA 90 bp | TGCCCTCTTCTGGTGTGTCTGAGGAGAGCAACAGTTTTCACATACATAAAACCTGGTCTTGTCTTGCTGTaGGCCACCCTGGTGAATACT | + |
|
Preference number: 3 (lower is better) Translates to: CPLLVCLRRATVFTYIKPGLVLL*ATLVNT Trigger: AGTATTCACCAGGGTGGCCAACAGCAAGACAAGACC...AGGTTTTATGTATGTGAAAACTGTTGCTCTCCTCAGACACACCAGAAGAGGGCA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000105878.3 |
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| CDS-3UTR CCA 90 bp | CGGTCTCACTGGCCTGGCTCTTCTCTTTCTGGTGCTTGGGCCCAGGCAGGCCTCAAGGCCAGCAGCAGCTaGAAGGCCGGATGGCGGAGC | + |
|
Preference number: 4 (lower is better) Translates to: RSHWPGSSLSGAWAQAGLKASSS*KAGWRS Trigger: GCTCCGCCATCCGGCCTTCCAGCTGCTGCTGGCCTT...GAGGCCTGCCTGGGCCCAAGCACCAGAAAGAGAAGAGCCAGGCCAGTGAGACCG 66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000055892.10 ENSMUST00000169381.8 |
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| CDS-3UTR GCA 90 bp | CTCTGCCGCCCGGGTGTAAGGGAGAGGGATGGGCTCCAGTCTGGGATGCAGCAGCGGGCCTCTGTACAATaGACCAGTGGCAGCTCGTCG | + |
|
Preference number: 4 (lower is better) Translates to: LCRPGVRERDGLQSGMQQRASVQ*TSGSSS Trigger: CGACGAGCTGCCACTGGTGCATTGTACAGAGGCCCG...CTGCTGCATCCCAGACTGGAGCCCATCCCTCTCCCTTACACCCGGGCGGCAGAG 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000055892.10 ENSMUST00000169381.8 |
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| CDS-3UTR GCA 90 bp | AGAGGGATGGGCTCCAGTCTGGGATGCAGCAGCTGGCCCAGTGTGTGCAGGCCCCGGGCCTCTGTACAATaGACCAGTGGCAGCTCGTCG | + |
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Preference number: 4 (lower is better) Translates to: RGMGSSLGCSSWPSVCRPRASVQ*TSGSSS Trigger: CGACGAGCTGCCACTGGTGCATTGTACAGAGGCCCG...GGGCCTGCACACACTGGGCCAGCTGCTGCATCCCAGACTGGAGCCCATCCCTCT 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000055892.10 ENSMUST00000169381.8 |
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| CDS-3UTR CCA 90 bp | GTGCACACGGTCTCACTGGCCTGGCTCTTCTCTTTCTGGTGCTTGGGCCCAGGCAAGGCCAGCAGCAGCTaGAAGGCCGGATGGCGGAGC | + |
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Preference number: 4 (lower is better) Translates to: VHTVSLAWLFSFWCLGPGKASSS*KAGWRS Trigger: GCTCCGCCATCCGGCCTTCCAGCTGCTGCTGGCCTT...GCCTGGGCCCAAGCACCAGAAAGAGAAGAGCCAGGCCAGTGAGACCGTGTGCAC 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000055892.10 ENSMUST00000169381.8 |
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| 3UTR CAA 72 bp | CGCCCACTCACAGCCAGAATCCCGACTCCTCCGGACTaGAGGCTCCTGGGCATAAGCCCTGCAGATGCTGCC | + |
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Preference number: 4 (lower is better) Translates to: RPLTARIPTPPD*RLLGISPADAA Trigger: GGCAGCATCTGCAGGGCTTATGCCCAGGAGCCTCAAGTCCGGAGGAGTCGGGATTCTGGCTGTGAGTGGGCG 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000055892.10 ENSMUST00000169381.8 |
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| CDS-3UTR TCA 90 bp | CACTGGCCTGGCTCTTCTCTTTCTGGTGCTTGGGCCCAGGCAGGCCTCATCCAGCGCAGGTCTTTTCTGTaGGGTTACTCAGGGGGCCCC | + |
|
Preference number: 4 (lower is better) Translates to: HWPGSSLSGAWAQAGLIQRRSFL*GYSGGP Trigger: GGGGCCCCCTGAGTAACCTCACAGAAAAGACCTGCG...CTGGATGAGGCCTGCCTGGGCCCAAGCACCAGAAAGAGAAGAGCCAGGCCAGTG 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000055892.10 ENSMUST00000169381.8 |
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| CDS-3UTR TCA 90 bp | TCCGGACTTGAGGCTCCTGGGCATAAGCCCTGCAGATGCTGCCACCTTTCCAGCCGCAGGTCTTTTCTGTaGGGTTACTCAGGGGGCCCC | + |
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Preference number: 4 (lower is better) Translates to: SGLEAPGHKPCRCCHLSSRRSFL*GYSGGP Trigger: GGGGCCCCCTGAGTAACCTCACAGAAAAGACCTGCG...GCTGGAAAGGTGGCAGCATCTGCAGGGCTTATGCCCAGGAGCCTCAAGTCCGGA 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000055892.10 ENSMUST00000169381.8 |
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| CDS-3UTR GCA 90 bp | CACTGGCCTGGCTCTTCTCTTTCTGGTGCTTGGGCCCAGGCAGGCCTCATCCAGCGGTTGATGAGCACTTaGTCCTCATGCCGACCCAGG | + |
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Preference number: 4 (lower is better) Translates to: HWPGSSLSGAWAQAGLIQRLMST*SSCRPR Trigger: CCTGGGTCGGCATGAGGAGCAAGTGCTCATCAACCG...CTGGATGAGGCCTGCCTGGGCCCAAGCACCAGAAAGAGAAGAGCCAGGCCAGTG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000055892.10 ENSMUST00000169381.8 |
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| CDS-3UTR GCA 90 bp | ACCTTTCCAGCCCCATGGCCTCTGCCGCCCGGGTGTAAGGGAGAGGGATGGGCTCCCATGTTCTGGAAATaGTTGGGCACAAATGCACCG | + |
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Preference number: 4 (lower is better) Translates to: TFPAPWPLPPGCKGEGWAPMFWK*LGTNAP Trigger: CGGTGCATTTGTGCCCAAGCATTTCCAGAACATGGG...AGCCCATCCCTCTCCCTTACACCCGGGCGGCAGAGGCCATGGGGCTGGAAAGGT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000055892.10 ENSMUST00000169381.8 |
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| CDS-3UTR CCA 90 bp | TCTCTGCCCACTTTGAGGCAGGGTCTTGTCTTGCTGTTGGCCACCCTGGTGAATAAGGCCAGCAGCAGCTaGAAGGCCGGATGGCGGAGC | + |
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Preference number: 4 (lower is better) Translates to: SLPTLRQGLVLLLATLVNKASSS*KAGWRS Trigger: GCTCCGCCATCCGGCCTTCCAGCTGCTGCTGGCCTT...ATTCACCAGGGTGGCCAACAGCAAGACAAGACCCTGCCTCAAAGTGGGCAGAGA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000105878.3 |
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| CDS-3UTR CCA 90 bp | GGGATGCAGCAGCTGGCCCAGTGTGTGCAGGCCCTCCAGTTCCCATACTGCCTTTGTACAATGCACCAGTaGCAGCTCGTCGGTCCAGTC | + |
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Preference number: 4 (lower is better) Translates to: GMQQLAQCVQALQFPYCLCTMHQ*QLVGPV Trigger: GACTGGACCGACGAGCTGCCACTGGTGCATTGTACA...AAGGCAGTATGGGAACTGGAGGGCCTGCACACACTGGGCCAGCTGCTGCATCCC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000055892.10 ENSMUST00000169381.8 |
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| CDS-3UTR CCA 90 bp | GCCTGGCTCTTCTCTTTCTGGTGCTTGGGCCCAGGCAGGCCTCATCCAGCTCTGTGTACAATGCACCAGTaGCAGCTCGTCGGTCCAGTC | + |
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Preference number: 4 (lower is better) Translates to: AWLFSFWCLGPGRPHPALCTMHQ*QLVGPV Trigger: GACTGGACCGACGAGCTGCCACTGGTGCATTGTACA...CAGAGCTGGATGAGGCCTGCCTGGGCCCAAGCACCAGAAAGAGAAGAGCCAGGC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000055892.10 ENSMUST00000169381.8 |
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| CDS-3UTR CCA 90 bp | AGAGGGATGGGCTCCAGTCTGGGATGCAGCAGCTGGCCCAGTGTGTGCAGGCCCTTTGTTCCAGGTTTGTaGTCACCACGACGACGAACA | + |
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Preference number: 4 (lower is better) Translates to: RGMGSSLGCSSWPSVCRPFVPGL*SPRRRT Trigger: TGTTCGTCGTCGTGGTGACCACAAACCTGGAACAAA...GGGCCTGCACACACTGGGCCAGCTGCTGCATCCCAGACTGGAGCCCATCCCTCT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000055892.10 ENSMUST00000169381.8 |
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| CDS-3UTR TCA 90 bp | GTGCACACGGTCTCACTGGCCTGGCTCTTCTCTTTCTGGTGCTTGGGCCCAGGCATGCACCGAAGAGCGTaGCCCCAAACACAGAGAATA | + |
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Preference number: 4 (lower is better) Translates to: VHTVSLAWLFSFWCLGPGMHRRA*PQTQRI Trigger: TATTCTCTGTGTTTGGGGTCACGCTCTTCGGTGCAT...GCCTGGGCCCAAGCACCAGAAAGAGAAGAGCCAGGCCAGTGAGACCGTGTGCAC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000055892.10 ENSMUST00000169381.8 |
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| CDS-3UTR GCA 90 bp | GAGGGATGGGCTCCAGTCTGGGATGCAGCAGCTGGCCCAGTGTGTGCAGGCCCTATGTTCTCCACCTGCTaGCACCACTTGTGTTTTTCA | + |
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Preference number: 4 (lower is better) Translates to: EGWAPVWDAAAGPVCAGPMFSTC*HHLCFS Trigger: TGAAAAACACAAGTGGTGGCAGCAGGTGGAGAACAT...AGGGCCTGCACACACTGGGCCAGCTGCTGCATCCCAGACTGGAGCCCATCCCTC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000055892.10 ENSMUST00000169381.8 |
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| CDS-3UTR GCA 90 bp | CCTGGCTCTTCTCTTTCTGGTGCTTGGGCCCAGGCAGGCCTCATCCAGCTCTGGCCCATGTTCTGGAAATaGTTGGGCACAAATGCACCG | + |
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Preference number: 4 (lower is better) Translates to: PGSSLSGAWAQAGLIQLWPMFWK*LGTNAP Trigger: CGGTGCATTTGTGCCCAAGCATTTCCAGAACATGGG...CCAGAGCTGGATGAGGCCTGCCTGGGCCCAAGCACCAGAAAGAGAAGAGCCAGG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000055892.10 ENSMUST00000169381.8 |
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| CDS-3UTR CCA 90 bp | GGGATGCAGCAGCTGGCCCAGTGTGTGCAGGCCCTCCAGTTCCCATACTGCCTTCAACCAGTGGTTCCTTaGGGACAGTGGAAGTATCCT | + |
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Preference number: 4 (lower is better) Translates to: GMQQLAQCVQALQFPYCLQPVVP*GQWKYP Trigger: AGGATACTTCCACTGTCCCCAAGGAACCACTGGTTG...AAGGCAGTATGGGAACTGGAGGGCCTGCACACACTGGGCCAGCTGCTGCATCCC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000055892.10 ENSMUST00000169381.8 |
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| CDS-3UTR GCA 90 bp | CTCTGCCGCCCGGGTGTAAGGGAGAGGGATGGGCTCCAGTCTGGGATGCAGCAGCAAGTTCTCCTGTATTaGTTCAAGCACCAAGCAGAA | + |
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Preference number: 4 (lower is better) Translates to: LCRPGVRERDGLQSGMQQQVLLY*FKHQAE Trigger: TTCTGCTTGGTGCTTGAAGCAATACAGGAGAACTTG...CTGCTGCATCCCAGACTGGAGCCCATCCCTCTCCCTTACACCCGGGCGGCAGAG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000055892.10 ENSMUST00000169381.8 |
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| CDS-3UTR GCA 90 bp | GCCTGGCTCTTCTCTTTCTGGTGCTTGGGCCCAGGCAGGCCTCATCCAGCTCTGAGGATCACATTTTGCTaGTCCTGGTTGAACCGGATG | + |
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Preference number: 4 (lower is better) Translates to: AWLFSFWCLGPGRPHPALRITFC*SWLNRM Trigger: CATCCGGTTCAACCAGGAGCAGCAAAATGTGATCCT...CAGAGCTGGATGAGGCCTGCCTGGGCCCAAGCACCAGAAAGAGAAGAGCCAGGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000055892.10 ENSMUST00000169381.8 |
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| CDS-3UTR CCA 90 bp | CGGTCTCACTGGCCTGGCTCTTCTCTTTCTGGTGCTTGGGCCCAGGCAGGCCTCTGTTCTGGAAATGCTTaGGCACAAATGCACCGAAGA | + |
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Preference number: 4 (lower is better) Translates to: RSHWPGSSLSGAWAQAGLCSGNA*AQMHRR Trigger: TCTTCGGTGCATTTGTGCCCAAGCATTTCCAGAACA...GAGGCCTGCCTGGGCCCAAGCACCAGAAAGAGAAGAGCCAGGCCAGTGAGACCG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000055892.10 ENSMUST00000169381.8 |
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| CDS-3UTR CCA 90 bp | ACGGTCTCACTGGCCTGGCTCTTCTCTTTCTGGTGCTTGGGCCCAGGCAGGCCTTTTGTTCCAGGTTTGTaGTCACCACGACGACGAACA | + |
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Preference number: 4 (lower is better) Translates to: TVSLAWLFSFWCLGPGRPFVPGL*SPRRRT Trigger: TGTTCGTCGTCGTGGTGACCACAAACCTGGAACAAA...AGGCCTGCCTGGGCCCAAGCACCAGAAAGAGAAGAGCCAGGCCAGTGAGACCGT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000055892.10 ENSMUST00000169381.8 |
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| CDS-3UTR CCA 90 bp | CTCACTGGCCTGGCTCTTCTCTTTCTGGTGCTTGGGCCCAGGCAGGCCTCATCCTGTTCTGGAAATGCTTaGGCACAAATGCACCGAAGA | + |
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Preference number: 4 (lower is better) Translates to: LTGLALLFLVLGPRQASSCSGNA*AQMHRR Trigger: TCTTCGGTGCATTTGTGCCCAAGCATTTCCAGAACA...GGATGAGGCCTGCCTGGGCCCAAGCACCAGAAAGAGAAGAGCCAGGCCAGTGAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000055892.10 ENSMUST00000169381.8 |
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| CDS-3UTR CCA 90 bp | TTCTCTTTCTGGTGCTTGGGCCCAGGCAGGCCTCATCCAGCTCTGGCTGATGCACAACCAGTGGTTCCTTaGGGACAGTGGAAGTATCCT | + |
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Preference number: 4 (lower is better) Translates to: FSFWCLGPGRPHPALADAQPVVP*GQWKYP Trigger: AGGATACTTCCACTGTCCCCAAGGAACCACTGGTTG...TGCATCAGCCAGAGCTGGATGAGGCCTGCCTGGGCCCAAGCACCAGAAAGAGAA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000055892.10 ENSMUST00000169381.8 |
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| CDS-3UTR TCA 90 bp | AACTGGTCTCTGCCCACTTTGAGGCAGGGTCTTGTCTTGCTGTTGGCCACCCTGCATGACCTCCAGCTTTaGTTTCGAATCTGGGGATCC | + |
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Preference number: 4 (lower is better) Translates to: NWSLPTLRQGLVLLLATLHDLQL*FRIWGS Trigger: GGATCCCCAGATTCGAAATCAAAGCTGGAGGTCATG...CAGGGTGGCCAACAGCAAGACAAGACCCTGCCTCAAAGTGGGCAGAGACCAGTT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000105878.3 |
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| CDS-3UTR GCA 90 bp | TCCGGACTTGAGGCTCCTGGGCATAAGCCCTGCAGATGCTGCCACCTTTCCAGCATGTTCTCCACCTGCTaGCACCACTTGTGTTTTTCA | + |
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Preference number: 4 (lower is better) Translates to: SGLEAPGHKPCRCCHLSSMFSTC*HHLCFS Trigger: TGAAAAACACAAGTGGTGGCAGCAGGTGGAGAACAT...GCTGGAAAGGTGGCAGCATCTGCAGGGCTTATGCCCAGGAGCCTCAAGTCCGGA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000055892.10 ENSMUST00000169381.8 |
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| CDS-3UTR GCA 90 bp | GGGATGCAGCAGCTGGCCCAGTGTGTGCAGGCCCTCCAGTTCCCATACTGCCTTCAAGTTCTCCTGTATTaGTTCAAGCACCAAGCAGAA | + |
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Preference number: 4 (lower is better) Translates to: GMQQLAQCVQALQFPYCLQVLLY*FKHQAE Trigger: TTCTGCTTGGTGCTTGAAGCAATACAGGAGAACTTG...AAGGCAGTATGGGAACTGGAGGGCCTGCACACACTGGGCCAGCTGCTGCATCCC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000055892.10 ENSMUST00000169381.8 |
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| CDS-3UTR GCA 90 bp | TTCTCTTTCTGGTGCTTGGGCCCAGGCAGGCCTCATCCAGCTCTGGCTGATGCAAGGATCACATTTTGCTaGTCCTGGTTGAACCGGATG | + |
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Preference number: 4 (lower is better) Translates to: FSFWCLGPGRPHPALADARITFC*SWLNRM Trigger: CATCCGGTTCAACCAGGAGCAGCAAAATGTGATCCT...TGCATCAGCCAGAGCTGGATGAGGCCTGCCTGGGCCCAAGCACCAGAAAGAGAA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000055892.10 ENSMUST00000169381.8 |
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| CDS-3UTR CCA 90 bp | CTCTGCCGCCCGGGTGTAAGGGAGAGGGATGGGCTCCAGTCTGGGATGCAGCAGACACAATGTCATCTATaGTCGAGAATAGCTCGTAAT | + |
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Preference number: 4 (lower is better) Translates to: LCRPGVRERDGLQSGMQQTQCHL*SRIARN Trigger: ATTACGAGCTATTCTCGACCATAGATGACATTGTGT...CTGCTGCATCCCAGACTGGAGCCCATCCCTCTCCCTTACACCCGGGCGGCAGAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000055892.10 ENSMUST00000169381.8 |
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| CDS-3UTR GCA 90 bp | CTCTGCCGCCCGGGTGTAAGGGAGAGGGATGGGCTCCAGTCTGGGATGCAGCAGCAAGATAAAGACAATTaGGAAGTTGAGGATATTCCA | + |
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Preference number: 4 (lower is better) Translates to: LCRPGVRERDGLQSGMQQQDKDN*EVEDIP Trigger: TGGAATATCCTCAACTTCGCAATTGTCTTTATCTTG...CTGCTGCATCCCAGACTGGAGCCCATCCCTCTCCCTTACACCCGGGCGGCAGAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000055892.10 |
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| CDS-3UTR TCA 90 bp | AGGCCTCATCCAGCTCTGGCTGATGCAGACAGAGGTCAGGGATGTTCATCTTTAATGCACCGAAGAGCGTaGCCCCAAACACAGAGAATA | + |
|
Preference number: 4 (lower is better) Translates to: RPHPALADADRGQGCSSLMHRRA*PQTQRI Trigger: TATTCTCTGTGTTTGGGGTCACGCTCTTCGGTGCAT...TAAAGATGAACATCCCTGACCTCTGTCTGCATCAGCCAGAGCTGGATGAGGCCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000055892.10 ENSMUST00000169381.8 |
||
| CDS-3UTR GCA 90 bp | AACAACTGGTCTCTGCCCACTTTGAGGCAGGGTCTTGTCTTGCTGTTGGCCACCATGTTCTCCACCTGCTaGCACCACTTGTGTTTTTCA | + |
|
Preference number: 4 (lower is better) Translates to: NNWSLPTLRQGLVLLLATMFSTC*HHLCFS Trigger: TGAAAAACACAAGTGGTGGCAGCAGGTGGAGAACAT...GGTGGCCAACAGCAAGACAAGACCCTGCCTCAAAGTGGGCAGAGACCAGTTGTT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000105878.3 |
||
| CDS-3UTR CCA 90 bp | TCCGGACTTGAGGCTCCTGGGCATAAGCCCTGCAGATGCTGCCACCTTTCCAGCACACAATGTCATCTATaGTCGAGAATAGCTCGTAAT | + |
|
Preference number: 4 (lower is better) Translates to: SGLEAPGHKPCRCCHLSSTQCHL*SRIARN Trigger: ATTACGAGCTATTCTCGACCATAGATGACATTGTGT...GCTGGAAAGGTGGCAGCATCTGCAGGGCTTATGCCCAGGAGCCTCAAGTCCGGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000055892.10 ENSMUST00000169381.8 |
||
| CDS-3UTR CCA 90 bp | AACAACTGGTCTCTGCCCACTTTGAGGCAGGGTCTTGTCTTGCTGTTGGCCACCGTTAGCTTGAGTTTCTaGGGATTTCTGCTGTCTCCA | + |
|
Preference number: 4 (lower is better) Translates to: NNWSLPTLRQGLVLLLATVSLSF*GFLLSP Trigger: TGGAGACAGCAGAAATCCCCAGAAACTCAAGCTAAC...GGTGGCCAACAGCAAGACAAGACCCTGCCTCAAAGTGGGCAGAGACCAGTTGTT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000105878.3 |
||
| CDS-3UTR GCA 90 bp | TGCCCTCTTCTGGTGTGTCTGAGGAGAGCAACAGTTTTCACATACATAAAACCTCGGTTGATGAGCACTTaGTCCTCATGCCGACCCAGG | + |
|
Preference number: 4 (lower is better) Translates to: CPLLVCLRRATVFTYIKPRLMST*SSCRPR Trigger: CCTGGGTCGGCATGAGGAGCAAGTGCTCATCAACCG...AGGTTTTATGTATGTGAAAACTGTTGCTCTCCTCAGACACACCAGAAGAGGGCA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000105878.3 |
||
| CDS-3UTR CAA 90 bp | ACCTTTCCAGCCCCATGGCCTCTGCCGCCCGGGTGTAAGGGAGAGGGATGGGCTGCGGTTGATGAGCACTaGCTCCTCATGCCGACCCAG | + |
|
Preference number: 5 (lower is better) Translates to: TFPAPWPLPPGCKGEGWAAVDEH*LLMPTQ Trigger: CTGGGTCGGCATGAGGAGCAAGTGCTCATCAACCGC...AGCCCATCCCTCTCCCTTACACCCGGGCGGCAGAGGCCATGGGGCTGGAAAGGT 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000055892.10 ENSMUST00000169381.8 |
||
| CDS-3UTR CAA 90 bp | TCCGGACTTGAGGCTCCTGGGCATAAGCCCTGCAGATGCTGCCACCTTTCCAGCGCGGTTGATGAGCACTaGCTCCTCATGCCGACCCAG | + |
|
Preference number: 5 (lower is better) Translates to: SGLEAPGHKPCRCCHLSSAVDEH*LLMPTQ Trigger: CTGGGTCGGCATGAGGAGCAAGTGCTCATCAACCGC...GCTGGAAAGGTGGCAGCATCTGCAGGGCTTATGCCCAGGAGCCTCAAGTCCGGA 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000055892.10 ENSMUST00000169381.8 |
||
| CDS-3UTR CAA 90 bp | CTCACTGGCCTGGCTCTTCTCTTTCTGGTGCTTGGGCCCAGGCAGGCCTCATCCCCAACCAGTGGTTCCTaGGGGACAGTGGAAGTATCC | + |
|
Preference number: 5 (lower is better) Translates to: LTGLALLFLVLGPRQASSPTSGS*GTVEVS Trigger: GGATACTTCCACTGTCCCCAAGGAACCACTGGTTGG...GGATGAGGCCTGCCTGGGCCCAAGCACCAGAAAGAGAAGAGCCAGGCCAGTGAG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000055892.10 ENSMUST00000169381.8 |
||
| CDS-3UTR CAA 90 bp | ACGGTCTCACTGGCCTGGCTCTTCTCTTTCTGGTGCTTGGGCCCAGGCAGGCCTCCAACCAGTGGTTCCTaGGGGACAGTGGAAGTATCC | + |
|
Preference number: 5 (lower is better) Translates to: TVSLAWLFSFWCLGPGRPPTSGS*GTVEVS Trigger: GGATACTTCCACTGTCCCCAAGGAACCACTGGTTGG...AGGCCTGCCTGGGCCCAAGCACCAGAAAGAGAAGAGCCAGGCCAGTGAGACCGT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000055892.10 ENSMUST00000169381.8 |
||
| CDS-3UTR CAA 90 bp | TGCCGCCCGGGTGTAAGGGAGAGGGATGGGCTCCAGTCTGGGATGCAGCAGCTGATGTTCTGGAAATGCTaGGGCACAAATGCACCGAAG | + |
|
Preference number: 5 (lower is better) Translates to: CRPGVRERDGLQSGMQQLMFWKC*GTNAPK Trigger: CTTCGGTGCATTTGTGCCCAAGCATTTCCAGAACAT...CAGCTGCTGCATCCCAGACTGGAGCCCATCCCTCTCCCTTACACCCGGGCGGCA 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000055892.10 ENSMUST00000169381.8 |
||
| CDS-3UTR CAA 90 bp | ACGGTCTCACTGGCCTGGCTCTTCTCTTTCTGGTGCTTGGGCCCAGGCAGGCCTACGACGACGAACAAGTaGAGACCAATGAAGGCACCG | + |
|
Preference number: 5 (lower is better) Translates to: TVSLAWLFSFWCLGPGRPTTTNK*RPMKAP Trigger: CGGTGCCTTCATTGGTCTCAACTTGTTCGTCGTCGT...AGGCCTGCCTGGGCCCAAGCACCAGAAAGAGAAGAGCCAGGCCAGTGAGACCGT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000055892.10 ENSMUST00000169381.8 |
||
| CDS-3UTR CAA 90 bp | CTCTGCCGCCCGGGTGTAAGGGAGAGGGATGGGCTCCAGTCTGGGATGCAGCAGTCCTCTCGGATCTCTTaGTACTCCATCAAGTTCTCC | + |
|
Preference number: 5 (lower is better) Translates to: LCRPGVRERDGLQSGMQQSSRIS*YSIKFS Trigger: GGAGAACTTGATGGAGTACAAAGAGATCCGAGAGGA...CTGCTGCATCCCAGACTGGAGCCCATCCCTCTCCCTTACACCCGGGCGGCAGAG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000055892.10 ENSMUST00000169381.8 |
||
| CDS-3UTR CAA 90 bp | CGGTCTCACTGGCCTGGCTCTTCTCTTTCTGGTGCTTGGGCCCAGGCAGGCCTCTCCTCCACGATCATGTaGAGTTCCTCTCGGATCTCT | + |
|
Preference number: 5 (lower is better) Translates to: RSHWPGSSLSGAWAQAGLSSTIM*SSSRIS Trigger: AGAGATCCGAGAGGAACTCAACATGATCGTGGAGGA...GAGGCCTGCCTGGGCCCAAGCACCAGAAAGAGAAGAGCCAGGCCAGTGAGACCG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000055892.10 ENSMUST00000169381.8 |
||
| CDS GCA 90 bp | GGTTCCTTGGGGACAGTGGAAGTATCCTTGCGGGCCTCTGTACAATaGACCAGTGGCAGCTCGTCGGTCCAGTCCTCATCCTCTTCTGTC | + |
|
Preference number: 5 (lower is better) Translates to: GSLGTVEVSLRASVQ*TSGSSSVQSSSSSV Trigger: GACAGAAGAGGATGAGGACTGGACCGACGAGCTGCCACTGGTGCATTGTACAGAGGCCCGCAAGGATACTTCCACTGTCCCCAAGGAACC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000055892.10 ENSMUST00000169381.8 |
||
| CDS-3UTR CAA 90 bp | AACAACTGGTCTCTGCCCACTTTGAGGCAGGGTCTTGTCTTGCTGTTGGCCACCGCGGTTGATGAGCACTaGCTCCTCATGCCGACCCAG | + |
|
Preference number: 5 (lower is better) Translates to: NNWSLPTLRQGLVLLLATAVDEH*LLMPTQ Trigger: CTGGGTCGGCATGAGGAGCAAGTGCTCATCAACCGC...GGTGGCCAACAGCAAGACAAGACCCTGCCTCAAAGTGGGCAGAGACCAGTTGTT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000105878.3 |
||
| CDS-3UTR CAA 90 bp | CTCTGCCGCCCGGGTGTAAGGGAGAGGGATGGGCTCCAGTCTGGGATGCAGCAGAAGACAATTGCGAAGTaGAGGATATTCCAGCCATCC | + |
|
Preference number: 5 (lower is better) Translates to: LCRPGVRERDGLQSGMQQKTIAK*RIFQPS Trigger: GGATGGCTGGAATATCCTCAACTTCGCAATTGTCTT...CTGCTGCATCCCAGACTGGAGCCCATCCCTCTCCCTTACACCCGGGCGGCAGAG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000055892.10 |
||
| CDS-3UTR CAA 90 bp | CTCTGCCGCCCGGGTGTAAGGGAGAGGGATGGGCTCCAGTCTGGGATGCAGCAGTCAAGTTCTCCTGTATaGCTTCAAGCACCAAGCAGA | + |
|
Preference number: 5 (lower is better) Translates to: LCRPGVRERDGLQSGMQQSSSPV*LQAPSR Trigger: TCTGCTTGGTGCTTGAAGCAATACAGGAGAACTTGA...CTGCTGCATCCCAGACTGGAGCCCATCCCTCTCCCTTACACCCGGGCGGCAGAG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000055892.10 ENSMUST00000169381.8 |
||
| CDS-3UTR CAA 90 bp | AGAGGGATGGGCTCCAGTCTGGGATGCAGCAGCTGGCCCAGTGTGTGCAGGCCCTCAAGTTCTCCTGTATaGCTTCAAGCACCAAGCAGA | + |
|
Preference number: 5 (lower is better) Translates to: RGMGSSLGCSSWPSVCRPSSSPV*LQAPSR Trigger: TCTGCTTGGTGCTTGAAGCAATACAGGAGAACTTGA...GGGCCTGCACACACTGGGCCAGCTGCTGCATCCCAGACTGGAGCCCATCCCTCT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000055892.10 ENSMUST00000169381.8 |
||
| CDS-3UTR CAA 90 bp | GGGATGCAGCAGCTGGCCCAGTGTGTGCAGGCCCTCCAGTTCCCATACTGCCTTTCCTCCACGATCATGTaGAGTTCCTCTCGGATCTCT | + |
|
Preference number: 5 (lower is better) Translates to: GMQQLAQCVQALQFPYCLSSTIM*SSSRIS Trigger: AGAGATCCGAGAGGAACTCAACATGATCGTGGAGGA...AAGGCAGTATGGGAACTGGAGGGCCTGCACACACTGGGCCAGCTGCTGCATCCC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000055892.10 ENSMUST00000169381.8 |
||
| CDS-3UTR CAA 90 bp | TGCACACGGTCTCACTGGCCTGGCTCTTCTCTTTCTGGTGCTTGGGCCCAGGCAATGACATCTCTGCGGTaGATGAGCACTTGCTCCTCA | + |
|
Preference number: 5 (lower is better) Translates to: CTRSHWPGSSLSGAWAQAMTSLR*MSTCSS Trigger: TGAGGAGCAAGTGCTCATCAACCGCAGAGATGTCAT...TGCCTGGGCCCAAGCACCAGAAAGAGAAGAGCCAGGCCAGTGAGACCGTGTGCA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000055892.10 ENSMUST00000169381.8 |
||
| CDS-3UTR CAA 90 bp | GCCTGGCTCTTCTCTTTCTGGTGCTTGGGCCCAGGCAGGCCTCATCCAGCTCTGTCCTCTCGGATCTCTTaGTACTCCATCAAGTTCTCC | + |
|
Preference number: 5 (lower is better) Translates to: AWLFSFWCLGPGRPHPALSSRIS*YSIKFS Trigger: GGAGAACTTGATGGAGTACAAAGAGATCCGAGAGGA...CAGAGCTGGATGAGGCCTGCCTGGGCCCAAGCACCAGAAAGAGAAGAGCCAGGC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000055892.10 ENSMUST00000169381.8 |
||
| CDS CCA 90 bp | GGGGACAGTGGAAGTATCCTTGCGGGCCTCTGTACAATGCACCAGTaGCAGCTCGTCGGTCCAGTCCTCATCCTCTTCTGTCTCAGTAAA | + |
|
Preference number: 5 (lower is better) Translates to: GDSGSILAGLCTMHQ*QLVGPVLILFCLSK Trigger: TTTACTGAGACAGAAGAGGATGAGGACTGGACCGACGAGCTGCCACTGGTGCATTGTACAGAGGCCCGCAAGGATACTTCCACTGTCCCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000055892.10 ENSMUST00000169381.8 |
||
| CDS-3UTR CAA 90 bp | TGCACACGGTCTCACTGGCCTGGCTCTTCTCTTTCTGGTGCTTGGGCCCAGGCAATGTTCTGGAAATGCTaGGGCACAAATGCACCGAAG | + |
|
Preference number: 5 (lower is better) Translates to: CTRSHWPGSSLSGAWAQAMFWKC*GTNAPK Trigger: CTTCGGTGCATTTGTGCCCAAGCATTTCCAGAACAT...TGCCTGGGCCCAAGCACCAGAAAGAGAAGAGCCAGGCCAGTGAGACCGTGTGCA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000055892.10 ENSMUST00000169381.8 |
||
| CDS-3UTR CAA 90 bp | TTCTCTTTCTGGTGCTTGGGCCCAGGCAGGCCTCATCCAGCTCTGGCTGATGCAGCCGGTCTTCATCATTaGTTCCAGGTTTGTGGTCAC | + |
|
Preference number: 5 (lower is better) Translates to: FSFWCLGPGRPHPALADAAGLHH*FQVCGH Trigger: GTGACCACAAACCTGGAACAAATGATGAAGACCGGC...TGCATCAGCCAGAGCTGGATGAGGCCTGCCTGGGCCCAAGCACCAGAAAGAGAA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000055892.10 ENSMUST00000169381.8 |
||
| CDS-3UTR CAA 90 bp | AACTGGTCTCTGCCCACTTTGAGGCAGGGTCTTGTCTTGCTGTTGGCCACCCTGATGACATCTCTGCGGTaGATGAGCACTTGCTCCTCA | + |
|
Preference number: 5 (lower is better) Translates to: NWSLPTLRQGLVLLLATLMTSLR*MSTCSS Trigger: TGAGGAGCAAGTGCTCATCAACCGCAGAGATGTCAT...CAGGGTGGCCAACAGCAAGACAAGACCCTGCCTCAAAGTGGGCAGAGACCAGTT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000105878.3 |
||
| CDS-3UTR CAA 90 bp | AGGCCTCATCCAGCTCTGGCTGATGCAGACAGAGGTCAGGGATGTTCATCTTTAACGACGACGAACAAGTaGAGACCAATGAAGGCACCG | + |
|
Preference number: 5 (lower is better) Translates to: RPHPALADADRGQGCSSLTTTNK*RPMKAP Trigger: CGGTGCCTTCATTGGTCTCAACTTGTTCGTCGTCGT...TAAAGATGAACATCCCTGACCTCTGTCTGCATCAGCCAGAGCTGGATGAGGCCT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000055892.10 ENSMUST00000169381.8 |
||
| CDS GCA 90 bp | AAGAAGAGGATGAGAGCCATGACATTAGCCAAGTCTGGCATCGACTaGAGGATAACCTTGATGATTCTGGCCAGGGGTTCCACCGCCATA | + |
|
Preference number: 5 (lower is better) Translates to: KKRMRAMTLAKSGID*RITLMILARGSTAI Trigger: TATGGCGGTGGAACCCCTGGCCAGAATCATCAAGGTTATCCTGCAGTCGATGCCAGACTTGGCTAATGTCATGGCTCTCATCCTCTTCTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000055892.10 |
||
| CDS GCA 90 bp | AGGAAGGTGGCGCTTTTGGAGGTATACTTGTGTAGGATCACATTTTaGTGCTCCTGGTTGAACCGGATGGAGGACACTTCCTCCACGATC | + |
|
Preference number: 5 (lower is better) Translates to: RKVALLEVYLCRITF*CSWLNRMEDTSSTI Trigger: GATCGTGGAGGAAGTGTCCTCCATCCGGTTCAACCAGGAGCAGCAAAATGTGATCCTACACAAGTATACCTCCAAAAGCGCCACCTTCCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000055892.10 ENSMUST00000169381.8 |
||
| CDS-3UTR CAA 90 bp | AGGCCTCATCCAGCTCTGGCTGATGCAGACAGAGGTCAGGGATGTTCATCTTTAGCCGGTCTTCATCATTaGTTCCAGGTTTGTGGTCAC | + |
|
Preference number: 5 (lower is better) Translates to: RPHPALADADRGQGCSSLAGLHH*FQVCGH Trigger: GTGACCACAAACCTGGAACAAATGATGAAGACCGGC...TAAAGATGAACATCCCTGACCTCTGTCTGCATCAGCCAGAGCTGGATGAGGCCT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000055892.10 ENSMUST00000169381.8 |
||
| CDS GCA 90 bp | AAGGTGGCGCTTTTGGAGGTATACTTGTGTAGGATCACATTTTGCTaGTCCTGGTTGAACCGGATGGAGGACACTTCCTCCACGATCATG | + |
|
Preference number: 5 (lower is better) Translates to: KVALLEVYLCRITFC*SWLNRMEDTSSTIM Trigger: CATGATCGTGGAGGAAGTGTCCTCCATCCGGTTCAACCAGGAGCAGCAAAATGTGATCCTACACAAGTATACCTCCAAAAGCGCCACCTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000055892.10 ENSMUST00000169381.8 |
||
| CDS GCA 90 bp | GAGTTCCTCTCGGATCTCTTTGTACTCCATCAAGTTCTCCTGTATTaGTTCAAGCACCAAGCAGAAGTTATCGCAGGTCTTTTCTGTGAG | + |
|
Preference number: 5 (lower is better) Translates to: EFLSDLFVLHQVLLY*FKHQAEVIAGLFCE Trigger: CTCACAGAAAAGACCTGCGATAACTTCTGCTTGGTGCTTGAAGCAATACAGGAGAACTTGATGGAGTACAAAGAGATCCGAGAGGAACTC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000055892.10 ENSMUST00000169381.8 |
||
| CDS CAA 72 bp | CCAACCAGTGGTTCCTTGGGGACAGTGGAAGTATCCTaGCGGGCCTCTGTACAATGCACCAGTGGCAGCTCG | + |
|
Preference number: 6 (lower is better) Translates to: PTSGSLGTVEVS*RASVQCTSGSS Trigger: CGAGCTGCCACTGGTGCATTGTACAGAGGCCCGCAAGGATACTTCCACTGTCCCCAAGGAACCACTGGTTGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000055892.10 ENSMUST00000169381.8 |
||
| CDS GCA 72 bp | CAACCAGTGGTTCCTTGGGGACAGTGGAAGTATCCTTaGGGGCCTCTGTACAATGCACCAGTGGCAGCTCGT | + |
|
Preference number: 6 (lower is better) Translates to: QPVVPWGQWKYP*GPLYNAPVAAR Trigger: ACGAGCTGCCACTGGTGCATTGTACAGAGGCCCGCAAGGATACTTCCACTGTCCCCAAGGAACCACTGGTTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000055892.10 ENSMUST00000169381.8 |
||
| CDS CAA 90 bp | AGAGCCATGACATTAGCCAAGTCTGGCATCGACTGCAGGATAACCTaGATGATTCTGGCCAGGGGTTCCACCGCCATACACACATGCACC | + |
|
Preference number: 6 (lower is better) Translates to: RAMTLAKSGIDCRIT*MILARGSTAIHTCT Trigger: GGTGCATGTGTGTATGGCGGTGGAACCCCTGGCCAGAATCATCAAGGTTATCCTGCAGTCGATGCCAGACTTGGCTAATGTCATGGCTCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000055892.10 |
||
| CDS CAA 90 bp | CCAGGCATCCTTCTTCTCCATGACATCTCTGCGGTTGATGAGCACTaGCTCCTCATGCCGACCCAGGAGTTCATAGGCTTTTCTCTTAGG | + |
|
Preference number: 6 (lower is better) Translates to: PGILLLHDISAVDEH*LLMPTQEFIGFSLR Trigger: CCTAAGAGAAAAGCCTATGAACTCCTGGGTCGGCATGAGGAGCAAGTGCTCATCAACCGCAGAGATGTCATGGAGAAGAAGGATGCCTGG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000055892.10 ENSMUST00000105878.3 ENSMUST00000169381.8 |
||
| CDS GCA 72 bp | ATGAGAGCCATGACATTAGCCAAGTCTGGCATCGACTaGAGGATAACCTTGATGATTCTGGCCAGGGGTTCC | + |
|
Preference number: 6 (lower is better) Translates to: MRAMTLAKSGID*RITLMILARGS Trigger: GGAACCCCTGGCCAGAATCATCAAGGTTATCCTGCAGTCGATGCCAGACTTGGCTAATGTCATGGCTCTCAT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000055892.10 |
||
| CDS CAA 72 bp | CTTCTTCTCCATGACATCTCTGCGGTTGATGAGCACTaGCTCCTCATGCCGACCCAGGAGTTCATAGGCTTT | + |
|
Preference number: 6 (lower is better) Translates to: LLLHDISAVDEH*LLMPTQEFIGF Trigger: AAAGCCTATGAACTCCTGGGTCGGCATGAGGAGCAAGTGCTCATCAACCGCAGAGATGTCATGGAGAAGAAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000055892.10 ENSMUST00000105878.3 ENSMUST00000169381.8 |
||
| CDS GCA 72 bp | GCGCTTTTGGAGGTATACTTGTGTAGGATCACATTTTaGTGCTCCTGGTTGAACCGGATGGAGGACACTTCC | + |
|
Preference number: 6 (lower is better) Translates to: ALLEVYLCRITF*CSWLNRMEDTS Trigger: GGAAGTGTCCTCCATCCGGTTCAACCAGGAGCAGCAAAATGTGATCCTACACAAGTATACCTCCAAAAGCGC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000055892.10 ENSMUST00000169381.8 |
||
| CDS CAA 72 bp | GGCTCGCTTAGGAAGGTGGCGCTTTTGGAGGTATACTaGTGTAGGATCACATTTTGCTGCTCCTGGTTGAAC | + |
|
Preference number: 6 (lower is better) Translates to: GSLRKVALLEVY*CRITFCCSWLN Trigger: GTTCAACCAGGAGCAGCAAAATGTGATCCTACACAAGTATACCTCCAAAAGCGCCACCTTCCTAAGCGAGCC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000055892.10 ENSMUST00000169381.8 |
||
| CDS CAA 90 bp | AAACTTTATGTTCAGGTGTCCCTCTTCCTCGCCGGTCTTCATCATTaGTTCCAGGTTTGTGGTCACCACGACGACGAACAAGTTGAGACC | + |
|
Preference number: 6 (lower is better) Translates to: KLYVQVSLFLAGLHH*FQVCGHHDDEQVET Trigger: GGTCTCAACTTGTTCGTCGTCGTGGTGACCACAAACCTGGAACAAATGATGAAGACCGGCGAGGAAGAGGGACACCTGAACATAAAGTTT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000055892.10 ENSMUST00000169381.8 |
||
| CDS GCA 72 bp | CTTTTGGAGGTATACTTGTGTAGGATCACATTTTGCTaGTCCTGGTTGAACCGGATGGAGGACACTTCCTCC | + |
|
Preference number: 6 (lower is better) Translates to: LLEVYLCRITFC*SWLNRMEDTSS Trigger: GGAGGAAGTGTCCTCCATCCGGTTCAACCAGGAGCAGCAAAATGTGATCCTACACAAGTATACCTCCAAAAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000055892.10 ENSMUST00000169381.8 |
||
| CDS CCA 72 bp | GAAGAAGAGGATGAGAGCCATGACATTAGCCAAGTCTaGCATCGACTGCAGGATAACCTTGATGATTCTGGC | + |
|
Preference number: 6 (lower is better) Translates to: EEEDESHDISQV*HRLQDNLDDSG Trigger: GCCAGAATCATCAAGGTTATCCTGCAGTCGATGCCAGACTTGGCTAATGTCATGGCTCTCATCCTCTTCTTC 49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000055892.10 |
||
| CDS CAA 72 bp | TTGAACCGGATGGAGGACACTTCCTCCACGATCATGTaGAGTTCCTCTCGGATCTCTTTGTACTCCATCAAG | + |
|
Preference number: 6 (lower is better) Translates to: LNRMEDTSSTIM*SSSRISLYSIK Trigger: CTTGATGGAGTACAAAGAGATCCGAGAGGAACTCAACATGATCGTGGAGGAAGTGTCCTCCATCCGGTTCAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000055892.10 ENSMUST00000169381.8 |
||
| CDS CAA 90 bp | GAGGACACTTCCTCCACGATCATGTTGAGTTCCTCTCGGATCTCTTaGTACTCCATCAAGTTCTCCTGTATTGCTTCAAGCACCAAGCAG | + |
|
Preference number: 6 (lower is better) Translates to: EDTSSTIMLSSSRIS*YSIKFSCIASSTKQ Trigger: CTGCTTGGTGCTTGAAGCAATACAGGAGAACTTGATGGAGTACAAAGAGATCCGAGAGGAACTCAACATGATCGTGGAGGAAGTGTCCTC 48% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000055892.10 ENSMUST00000169381.8 |
||
| CDS CAA 90 bp | CTTTTGGAGGTATACTTGTGTAGGATCACATTTTGCTGCTCCTGGTaGAACCGGATGGAGGACACTTCCTCCACGATCATGTTGAGTTCC | + |
|
Preference number: 6 (lower is better) Translates to: LLEVYLCRITFCCSW*NRMEDTSSTIMLSS Trigger: GGAACTCAACATGATCGTGGAGGAAGTGTCCTCCATCCGGTTCAACCAGGAGCAGCAAAATGTGATCCTACACAAGTATACCTCCAAAAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000055892.10 ENSMUST00000169381.8 |
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| CDS TCA 72 bp | TATACTTGTGTAGGATCACATTTTGCTGCTCCTGGTTaGACCGGATGGAGGACACTTCCTCCACGATCATGT | + |
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Preference number: 6 (lower is better) Translates to: YTCVGSHFAAPG*TGWRTLPPRSC Trigger: ACATGATCGTGGAGGAAGTGTCCTCCATCCGGTTCAACCAGGAGCAGCAAAATGTGATCCTACACAAGTATA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000055892.10 ENSMUST00000169381.8 |
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| CDS CAA 90 bp | CAGCCGGAGCACCCTGAGAGGGTAGGTGATGGCAACCATGTCAAGTaGTTTTATGAAGAACCCCATAAACAAGATAAAGACAATTGCGAA | + |
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Preference number: 6 (lower is better) Translates to: QPEHPERVGDGNHVK*FYEEPHKQDKDNCE Trigger: TTCGCAATTGTCTTTATCTTGTTTATGGGGTTCTTCATAAAACAACTTGACATGGTTGCCATCACCTACCCTCTCAGGGTGCTCCGGCTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000055892.10 |
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| CDS TCA 72 bp | GGTTACCGACATATACTGAACCATGACCTCCAGCTTTaGTTTCGAATCTGGGGATCCATACTGACCGAGATA | + |
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Preference number: 6 (lower is better) Translates to: GYRHILNHDLQL*FRIWGSILTEI Trigger: TATCTCGGTCAGTATGGATCCCCAGATTCGAAATCAAAGCTGGAGGTCATGGTTCAGTATATGTCGGTAACC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000105878.3 |
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| CDS CAA 72 bp | TCCTCCACGATCATGTTGAGTTCCTCTCGGATCTCTTaGTACTCCATCAAGTTCTCCTGTATTGCTTCAAGC | + |
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Preference number: 6 (lower is better) Translates to: SSTIMLSSSRIS*YSIKFSCIASS Trigger: GCTTGAAGCAATACAGGAGAACTTGATGGAGTACAAAGAGATCCGAGAGGAACTCAACATGATCGTGGAGGA 46% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000055892.10 ENSMUST00000169381.8 |
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| CDS GCA 72 bp | TCGGATCTCTTTGTACTCCATCAAGTTCTCCTGTATTaGTTCAAGCACCAAGCAGAAGTTATCGCAGGTCTT | + |
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Preference number: 6 (lower is better) Translates to: SDLFVLHQVLLY*FKHQAEVIAGL Trigger: AAGACCTGCGATAACTTCTGCTTGGTGCTTGAAGCAATACAGGAGAACTTGATGGAGTACAAAGAGATCCGA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000055892.10 ENSMUST00000169381.8 |
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| CDS CAA 72 bp | CACCCTGAGAGGGTAGGTGATGGCAACCATGTCAAGTaGTTTTATGAAGAACCCCATAAACAAGATAAAGAC | + |
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Preference number: 6 (lower is better) Translates to: HPERVGDGNHVK*FYEEPHKQDKD Trigger: GTCTTTATCTTGTTTATGGGGTTCTTCATAAAACAACTTGACATGGTTGCCATCACCTACCCTCTCAGGGTG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000055892.10 |
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