Pregenerated sensors for CATSPER3 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000021499Ensembl transcript IDs: ENSMUST00000021961.12, ENSMUST00000109898.3
Found 37 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS-3UTR TCA 90 bp | CACCCCTGGAGGCTTGTGTTTAATGGGACTGTCATAGTCTTCGAGGCCACGCCCTCGCGAACACAAACATaGGGAGGAAGAGCAGCGTCA | + |
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Preference number: 4 (lower is better) Translates to: HPWRLVFNGTVIVFEATPSRTQT*GGRAAS Trigger: TGACGCTGCTCTTCCTCCTCATGTTTGTGTTCGCGA...GGGCGTGGCCTCGAAGACTATGACAGTCCCATTAAACACAAGCCTCCAGGGGTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000109898.3 |
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| CDS-3UTR TCA 90 bp | CCCTGGAGGCTTGTGTTTAATGGGACTGTCATAGTCTTCGAGGCCACGCCCTCCTGTTCATCAGCCTGTTaGCCTCCTCTTGCTGGCGTT | + |
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Preference number: 4 (lower is better) Translates to: PWRLVFNGTVIVFEATPSCSSAC*PPLAGV Trigger: AACGCCAGCAAGAGGAGGTCAACAGGCTGATGAACA...GGAGGGCGTGGCCTCGAAGACTATGACAGTCCCATTAAACACAAGCCTCCAGGG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000109898.3 |
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| CDS-3UTR GCA 90 bp | CACCCCTGGAGGCTTGTGTTTAATGGGACTGTCATAGTCTTCGAGGCCACGCCCTTGTCCAGCTCTTCCTaGAGGTCAGTCCAGCCATCA | + |
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Preference number: 4 (lower is better) Translates to: HPWRLVFNGTVIVFEATPLSSSS*RSVQPS Trigger: TGATGGCTGGACTGACCTGCAGGAAGAGCTGGACAA...GGGCGTGGCCTCGAAGACTATGACAGTCCCATTAAACACAAGCCTCCAGGGGTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000109898.3 |
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| CDS-3UTR GCA 90 bp | AGAAACCACCCCTGGAGGCTTGTGTTTAATGGGACTGTCATAGTCTTCGAGGCCACCATGGGGTCTGTGTaGCGCAGGGTCTTCTTGAAG | + |
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Preference number: 4 (lower is better) Translates to: RNHPWRLVFNGTVIVFEATMGSV*RRVFLK Trigger: CTTCAAGAAGACCCTGCGGCACACAGACCCCATGGT...GGCCTCGAAGACTATGACAGTCCCATTAAACACAAGCCTCCAGGGGTGGTTTCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000109898.3 |
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| CDS-3UTR GCA 90 bp | TGGAGGCTTGTGTTTAATGGGACTGTCATAGTCTTCGAGGCCACGCCCTCCCAGTTCGTAGAGACTGGATaGCATCAGCAAAGTGGAGGT | + |
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Preference number: 4 (lower is better) Translates to: WRLVFNGTVIVFEATPSQFVETG*HQQSGG Trigger: ACCTCCACTTTGCTGATGGCATCCAGTCTCTACGAA...CTGGGAGGGCGTGGCCTCGAAGACTATGACAGTCCCATTAAACACAAGCCTCCA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000109898.3 |
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| CDS-3UTR TCA 90 bp | AACCACCCCTGGAGGCTTGTGTTTAATGGGACTGTCATAGTCTTCGAGGCCACGTGGAGGTATGCAGAATaGTTCCCCTTGATTTTGCGG | + |
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Preference number: 4 (lower is better) Translates to: NHPWRLVFNGTVIVFEATWRYAE*FPLILR Trigger: CCGCAAAATCAAGGGGAATCATTCTGCATACCTCCA...CGTGGCCTCGAAGACTATGACAGTCCCATTAAACACAAGCCTCCAGGGGTGGTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000109898.3 |
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| CDS-3UTR TCA 90 bp | CCCTGGAGGCTTGTGTTTAATGGGACTGTCATAGTCTTCGAGGCCACGCCCTCCCCTCCACCATATCAATaGAGTTCATGCTACCACTTT | + |
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Preference number: 4 (lower is better) Translates to: PWRLVFNGTVIVFEATPSPPPYQ*SSCYHF Trigger: AAAGTGGTAGCATGAACTTCATTGATATGGTGGAGG...GGAGGGCGTGGCCTCGAAGACTATGACAGTCCCATTAAACACAAGCCTCCAGGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000109898.3 |
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| CDS-3UTR GCA 90 bp | AACCACCCCTGGAGGCTTGTGTTTAATGGGACTGTCATAGTCTTCGAGGCCACGTTGCTCAGTCTTGCCTaGAATGCTTCCGATGCTGTA | + |
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Preference number: 4 (lower is better) Translates to: NHPWRLVFNGTVIVFEATLLSLA*NASDAV Trigger: TACAGCATCGGAAGCATTGCAGGCAAGACTGAGCAA...CGTGGCCTCGAAGACTATGACAGTCCCATTAAACACAAGCCTCCAGGGGTGGTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000109898.3 |
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| CDS-3UTR CCA 90 bp | AGAAACCACCCCTGGAGGCTTGTGTTTAATGGGACTGTCATAGTCTTCGAGGCCTGGACGAGCTCTCCTTaGGCATGTCTTCCAACATCA | + |
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Preference number: 4 (lower is better) Translates to: RNHPWRLVFNGTVIVFEAWTSSP*ACLPTS Trigger: TGATGTTGGAAGACATGCCCAAGGAGAGCTCGTCCA...GGCCTCGAAGACTATGACAGTCCCATTAAACACAAGCCTCCAGGGGTGGTTTCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000109898.3 |
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| CDS-3UTR TCA 90 bp | AGAAACCACCCCTGGAGGCTTGTGTTTAATGGGACTGTCATAGTCTTCGAGGCCCAGAATGATTCCCCTTaGTTTTGCGGAGGAGATAGG | + |
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Preference number: 4 (lower is better) Translates to: RNHPWRLVFNGTVIVFEAQNDSP*FCGGDR Trigger: CCTATCTCCTCCGCAAAATCAAGGGGAATCATTCTG...GGCCTCGAAGACTATGACAGTCCCATTAAACACAAGCCTCCAGGGGTGGTTTCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000109898.3 |
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| CDS-3UTR TCA 90 bp | AGAAACCACCCCTGGAGGCTTGTGTTTAATGGGACTGTCATAGTCTTCGAGGCCAATCCTCCGTGTGCATaGTCATCACACCCACAAACA | + |
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Preference number: 4 (lower is better) Translates to: RNHPWRLVFNGTVIVFEANPPCA*SSHPQT Trigger: TGTTTGTGGGTGTGATGATCATGCACACGGAGGATT...GGCCTCGAAGACTATGACAGTCCCATTAAACACAAGCCTCCAGGGGTGGTTTCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000109898.3 |
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| CDS-3UTR GCA 90 bp | AGAAACCACCCCTGGAGGCTTGTGTTTAATGGGACTGTCATAGTCTTCGAGGCCCAGTCTTGCCTGCAATaGTTCCGATGCTGTAGCAAA | + |
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Preference number: 4 (lower is better) Translates to: RNHPWRLVFNGTVIVFEAQSCLQ*FRCCSK Trigger: TTTGCTACAGCATCGGAAGCATTGCAGGCAAGACTG...GGCCTCGAAGACTATGACAGTCCCATTAAACACAAGCCTCCAGGGGTGGTTTCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000109898.3 |
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| CDS-3UTR CCA 90 bp | TGGAGGCTTGTGTTTAATGGGACTGTCATAGTCTTCGAGGCCACGCCCTCCCAGCTGACAATAACATCTTaGTTGTCCAGAGTGACCAAG | + |
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Preference number: 4 (lower is better) Translates to: WRLVFNGTVIVFEATPSQLTITS*LSRVTK Trigger: CTTGGTCACTCTGGACAACCAAGATGTTATTGTCAG...CTGGGAGGGCGTGGCCTCGAAGACTATGACAGTCCCATTAAACACAAGCCTCCA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000109898.3 |
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| CDS-3UTR CCA 90 bp | AACCACCCCTGGAGGCTTGTGTTTAATGGGACTGTCATAGTCTTCGAGGCCACGGTGATCATCACAATCTaGAAGAAAGTGCTCTTAATA | + |
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Preference number: 4 (lower is better) Translates to: NHPWRLVFNGTVIVFEATVIITI*KKVLLI Trigger: TATTAAGAGCACTTTCTTCCAGATTGTGATGATCAC...CGTGGCCTCGAAGACTATGACAGTCCCATTAAACACAAGCCTCCAGGGGTGGTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000109898.3 |
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| CDS TCA 90 bp | CCGTCACGCCAAATAGGCAGAATCCCAGGATCGCGAACACAAACATaGGGAGGAAGAGCAGCGTCAGCACCGAGGCCACAGTGTAGACCG | + |
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Preference number: 5 (lower is better) Translates to: PSRQIGRIPGSRTQT*GGRAASAPRPQCRP Trigger: CGGTCTACACTGTGGCCTCGGTGCTGACGCTGCTCTTCCTCCTCATGTTTGTGTTCGCGATCCTGGGATTCTGCCTATTTGGCGTGACGG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000021961.12 ENSMUST00000109898.3 |
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| CDS-3UTR CAA 90 bp | CCCTGGAGGCTTGTGTTTAATGGGACTGTCATAGTCTTCGAGGCCACGCCCTCCTGCCGCAGGGTCTTCTaGAAGCCCTCCACCATATCA | + |
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Preference number: 5 (lower is better) Translates to: PWRLVFNGTVIVFEATPSCRRVF*KPSTIS Trigger: TGATATGGTGGAGGGCTTCAAGAAGACCCTGCGGCA...GGAGGGCGTGGCCTCGAAGACTATGACAGTCCCATTAAACACAAGCCTCCAGGG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000109898.3 |
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| CDS-3UTR CAA 90 bp | CCCTGGAGGCTTGTGTTTAATGGGACTGTCATAGTCTTCGAGGCCACGCCCTCCACCAGTAAAAAGGAGTaGGTGGTGACCGTGGTGATC | + |
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Preference number: 5 (lower is better) Translates to: PWRLVFNGTVIVFEATPSTSKKE*VVTVVI Trigger: GATCACCACGGTCACCACCAACTCCTTTTTACTGGT...GGAGGGCGTGGCCTCGAAGACTATGACAGTCCCATTAAACACAAGCCTCCAGGG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000109898.3 |
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| CDS-3UTR CAA 90 bp | AACCACCCCTGGAGGCTTGTGTTTAATGGGACTGTCATAGTCTTCGAGGCCACGGTGTTCATCAGCCTGTaGACCTCCTCTTGCTGGCGT | + |
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Preference number: 5 (lower is better) Translates to: NHPWRLVFNGTVIVFEATVFISL*TSSCWR Trigger: ACGCCAGCAAGAGGAGGTCAACAGGCTGATGAACAC...CGTGGCCTCGAAGACTATGACAGTCCCATTAAACACAAGCCTCCAGGGGTGGTT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000109898.3 |
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| CDS GCA 90 bp | GTAAACGCCCGGCTCACAGTAAACTTCCTCTTGTCCAGCTCTTCCTaGAGGTCAGTCCAGCCATCAACCGTGGCCAAACTGAAGAGAGTA | + |
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Preference number: 5 (lower is better) Translates to: VNARLTVNFLLSSSS*RSVQPSTVAKLKRV Trigger: TACTCTCTTCAGTTTGGCCACGGTTGATGGCTGGACTGACCTGCAGGAAGAGCTGGACAAGAGGAAGTTTACTGTGAGCCGGGCGTTTAC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000021961.12 ENSMUST00000109898.3 |
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| CDS-3UTR CAA 90 bp | TGGAGGCTTGTGTTTAATGGGACTGTCATAGTCTTCGAGGCCACGCCCTCCCAGACAGTAAACTTCCTCTaGTCCAGCTCTTCCTGCAGG | + |
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Preference number: 5 (lower is better) Translates to: WRLVFNGTVIVFEATPSQTVNFL*SSSSCR Trigger: CCTGCAGGAAGAGCTGGACAAGAGGAAGTTTACTGT...CTGGGAGGGCGTGGCCTCGAAGACTATGACAGTCCCATTAAACACAAGCCTCCA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000109898.3 |
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| CDS GCA 90 bp | AAGGAGAGACTAGTGCTGAAGTCATCCAGAACCATGGGGTCTGTGTaGCGCAGGGTCTTCTTGAAGCCCTCCACCATATCAATGAAGTTC | + |
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Preference number: 5 (lower is better) Translates to: KERLVLKSSRTMGSV*RRVFLKPSTISMKF Trigger: GAACTTCATTGATATGGTGGAGGGCTTCAAGAAGACCCTGCGGCACACAGACCCCATGGTTCTGGATGACTTCAGCACTAGTCTCTCCTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000021961.12 ENSMUST00000109898.3 |
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| CDS-3UTR CAA 90 bp | AACCACCCCTGGAGGCTTGTGTTTAATGGGACTGTCATAGTCTTCGAGGCCACGACACCCACAAACATGTaGAGGAAGATGAAGGATGCA | + |
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Preference number: 5 (lower is better) Translates to: NHPWRLVFNGTVIVFEATTPTNM*RKMKDA Trigger: TGCATCCTTCATCTTCCTCAACATGTTTGTGGGTGT...CGTGGCCTCGAAGACTATGACAGTCCCATTAAACACAAGCCTCCAGGGGTGGTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000109898.3 |
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| CDS-3UTR CAA 90 bp | AGGCTTGTGTTTAATGGGACTGTCATAGTCTTCGAGGCCACGCCCTCCCAGCTAGCGTTTCAGGATTATTaGCTTCTCCTCCATAATCGC | + |
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Preference number: 5 (lower is better) Translates to: RLVFNGTVIVFEATPSQLAFQDY*LLLHNR Trigger: GCGATTATGGAGGAGAAGCAAATAATCCTGAAACGC...TAGCTGGGAGGGCGTGGCCTCGAAGACTATGACAGTCCCATTAAACACAAGCCT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000109898.3 |
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| CDS GCA 90 bp | ATGCTACCACTTTTCTGTGTGTTCATCAGCCTGTTGACCTCCTCTTaGTGGCGTTTCAGGATTATTTGCTTCTCCTCCATAATCGCAAGG | + |
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Preference number: 5 (lower is better) Translates to: MLPLFCVFISLLTSS*WRFRIICFSSIIAR Trigger: CCTTGCGATTATGGAGGAGAAGCAAATAATCCTGAAACGCCAGCAAGAGGAGGTCAACAGGCTGATGAACACACAGAAAAGTGGTAGCAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000021961.12 ENSMUST00000109898.3 |
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| CDS CCA 90 bp | CTACCACTTTTCTGTGTGTTCATCAGCCTGTTGACCTCCTCTTGCTaGCGTTTCAGGATTATTTGCTTCTCCTCCATAATCGCAAGGTTC | + |
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Preference number: 5 (lower is better) Translates to: LPLFCVFISLLTSSC*RFRIICFSSIIARF Trigger: GAACCTTGCGATTATGGAGGAGAAGCAAATAATCCTGAAACGCCAGCAAGAGGAGGTCAACAGGCTGATGAACACACAGAAAAGTGGTAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000021961.12 ENSMUST00000109898.3 |
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| CDS TCA 90 bp | CTTCATGAGGAACTCGCAGACATAGACAGATACAAAGAAAAGCTCTaGGACCTCAAAGGTTCTGAAAAACTCGAATTGTATGTCATAATT | + |
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Preference number: 5 (lower is better) Translates to: LHEELADIDRYKEKL*DLKGSEKLELYVII Trigger: AATTATGACATACAATTCGAGTTTTTCAGAACCTTTGAGGTCTCAGAGCTTTTCTTTGTATCTGTCTATGTCTGCGAGTTCCTCATGAAG 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000021961.12 |
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| CDS TCA 72 bp | CAAATAGGCAGAATCCCAGGATCGCGAACACAAACATaGGGAGGAAGAGCAGCGTCAGCACCGAGGCCACAG | + |
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Preference number: 6 (lower is better) Translates to: QIGRIPGSRTQT*GGRAASAPRPQ Trigger: CTGTGGCCTCGGTGCTGACGCTGCTCTTCCTCCTCATGTTTGTGTTCGCGATCCTGGGATTCTGCCTATTTG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000021961.12 ENSMUST00000109898.3 |
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| CDS GCA 72 bp | CGGCTCACAGTAAACTTCCTCTTGTCCAGCTCTTCCTaGAGGTCAGTCCAGCCATCAACCGTGGCCAAACTG | + |
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Preference number: 6 (lower is better) Translates to: RLTVNFLLSSSS*RSVQPSTVAKL Trigger: CAGTTTGGCCACGGTTGATGGCTGGACTGACCTGCAGGAAGAGCTGGACAAGAGGAAGTTTACTGTGAGCCG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000021961.12 ENSMUST00000109898.3 |
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| CDS GCA 72 bp | CTAGTGCTGAAGTCATCCAGAACCATGGGGTCTGTGTaGCGCAGGGTCTTCTTGAAGCCCTCCACCATATCA | + |
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Preference number: 6 (lower is better) Translates to: LVLKSSRTMGSV*RRVFLKPSTIS Trigger: TGATATGGTGGAGGGCTTCAAGAAGACCCTGCGGCACACAGACCCCATGGTTCTGGATGACTTCAGCACTAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000021961.12 ENSMUST00000109898.3 |
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| CDS CAA 90 bp | AAGATGAAGAGGATAGTAAACGCCCGGCTCACAGTAAACTTCCTCTaGTCCAGCTCTTCCTGCAGGTCAGTCCAGCCATCAACCGTGGCC | + |
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Preference number: 6 (lower is better) Translates to: KMKRIVNARLTVNFL*SSSSCRSVQPSTVA Trigger: GGCCACGGTTGATGGCTGGACTGACCTGCAGGAAGAGCTGGACAAGAGGAAGTTTACTGTGAGCCGGGCGTTTACTATCCTCTTCATCTT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000021961.12 ENSMUST00000109898.3 |
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| CDS CAA 72 bp | TCCAGAACCATGGGGTCTGTGTGCCGCAGGGTCTTCTaGAAGCCCTCCACCATATCAATGAAGTTCATGCTA | + |
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Preference number: 6 (lower is better) Translates to: SRTMGSVCRRVF*KPSTISMKFML Trigger: TAGCATGAACTTCATTGATATGGTGGAGGGCTTCAAGAAGACCCTGCGGCACACAGACCCCATGGTTCTGGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000021961.12 ENSMUST00000109898.3 |
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| CDS CAA 90 bp | CTGAAGTCATCCAGAACCATGGGGTCTGTGTGCCGCAGGGTCTTCTaGAAGCCCTCCACCATATCAATGAAGTTCATGCTACCACTTTTC | + |
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Preference number: 6 (lower is better) Translates to: LKSSRTMGSVCRRVF*KPSTISMKFMLPLF Trigger: GAAAAGTGGTAGCATGAACTTCATTGATATGGTGGAGGGCTTCAAGAAGACCCTGCGGCACACAGACCCCATGGTTCTGGATGACTTCAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000021961.12 ENSMUST00000109898.3 |
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| CDS CAA 72 bp | CCTGTTGACCTCCTCTTGCTGGCGTTTCAGGATTATTaGCTTCTCCTCCATAATCGCAAGGTTCCTCTCCAA | + |
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Preference number: 6 (lower is better) Translates to: PVDLLLLAFQDY*LLLHNRKVPLQ Trigger: TTGGAGAGGAACCTTGCGATTATGGAGGAGAAGCAAATAATCCTGAAACGCCAGCAAGAGGAGGTCAACAGG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000021961.12 ENSMUST00000109898.3 |
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| CDS CAA 90 bp | TCAATGAAGTTCATGCTACCACTTTTCTGTGTGTTCATCAGCCTGTaGACCTCCTCTTGCTGGCGTTTCAGGATTATTTGCTTCTCCTCC | + |
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Preference number: 6 (lower is better) Translates to: SMKFMLPLFCVFISL*TSSCWRFRIICFSS Trigger: GGAGGAGAAGCAAATAATCCTGAAACGCCAGCAAGAGGAGGTCAACAGGCTGATGAACACACAGAAAAGTGGTAGCATGAACTTCATTGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000021961.12 ENSMUST00000109898.3 |
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| CDS CAA 90 bp | CACAATCTCACAGTAGAGCTCCTGAAGCTTGCTGACAATAACATCTaGGTTGTCCAGAGTGACCAAGTAGATATCAATGAAGGAGAGACT | + |
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Preference number: 6 (lower is better) Translates to: HNLTVELLKLADNNI*VVQSDQVDINEGET Trigger: AGTCTCTCCTTCATTGATATCTACTTGGTCACTCTGGACAACCAAGATGTTATTGTCAGCAAGCTTCAGGAGCTCTACTGTGAGATTGTG 43% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000021961.12 ENSMUST00000109898.3 |
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| CDS CAA 72 bp | ACAGTAGAGCTCCTGAAGCTTGCTGACAATAACATCTaGGTTGTCCAGAGTGACCAAGTAGATATCAATGAA | + |
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Preference number: 6 (lower is better) Translates to: TVELLKLADNNI*VVQSDQVDINE Trigger: TTCATTGATATCTACTTGGTCACTCTGGACAACCAAGATGTTATTGTCAGCAAGCTTCAGGAGCTCTACTGT 42% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000021961.12 ENSMUST00000109898.3 |
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| CDS TCA 72 bp | GAACTCGCAGACATAGACAGATACAAAGAAAAGCTCTaGGACCTCAAAGGTTCTGAAAAACTCGAATTGTAT | + |
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Preference number: 6 (lower is better) Translates to: ELADIDRYKEKL*DLKGSEKLELY Trigger: ATACAATTCGAGTTTTTCAGAACCTTTGAGGTCTCAGAGCTTTTCTTTGTATCTGTCTATGTCTGCGAGTTC 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000021961.12 |
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