RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for CATSPER2 (Mus musculus)

Ensembl gene IDs: ENSMUSG00000033486

Ensembl transcript IDs: ENSMUST00000038073.5, ENSMUST00000154604.8

Found 39 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp GGGTCTCCCAGTCCAGGTTTTCAAGGAAAGCAGTATCGGCTGCAGTaGAGCCATGGGACGAGATTGAATGGGAAACTGGGTAGGCTTTTT +
Preference number: 1 (lower is better)
Translates to: GSPSPGFQGKQYRLQ*SHGTRLNGKLGRLF
Trigger: AAAAAGCCTACCCAGTTTCCCATTCAATCTCGTCCCATGGCTCCACTGCAGCCGATACTGCTTTCCTTGAAAACCTGGACTGGGAGACCC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000154604.8
3UTR TCA 90 bp CAGAAGAAGGCATTGAATCCCTGGAACTGGGGTTATAGGCAGTTGTaGGTCACCATGTGGGTTCTGGGAACTGAACCTGGGTCCTCTATA +
Preference number: 1 (lower is better)
Translates to: QKKALNPWNWGYRQL*VTMWVLGTEPGSSI
Trigger: TATAGAGGACCCAGGTTCAGTTCCCAGAACCCACATGGTGACTCACAACTGCCTATAACCCCAGTTCCAGGGATTCAATGCCTTCTTCTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000154604.8
3UTR TCA 90 bp CATATTTCTGTGTACCACATGCCTGAGAAGAGCAGAAGAAGGCATTaGATCCCTGGAACTGGGGTTATAGGCAGTTGTGAGTCACCATGT +
Preference number: 1 (lower is better)
Translates to: HISVYHMPEKSRRRH*IPGTGVIGSCESPC
Trigger: ACATGGTGACTCACAACTGCCTATAACCCCAGTTCCAGGGATTCAATGCCTTCTTCTGCTCTTCTCAGGCATGTGGTACACAGAAATATG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000154604.8
3UTR TCA 90 bp ACTGAACCTGGGTCCTCTATAAGAGCAGCAAGTGTACTTTACTACTaGGCCATCTCCTCAGCTCAGGTTAATAGAATTATTTGGGGTCGG +
Preference number: 1 (lower is better)
Translates to: TEPGSSIRAASVLYY*AISSAQVNRIIWGR
Trigger: CCGACCCCAAATAATTCTATTAACCTGAGCTGAGGAGATGGCTCAGTAGTAAAGTACACTTGCTGCTCTTATAGAGGACCCAGGTTCAGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000154604.8
3UTR GCA 90 bp AGACCCACCTGCTTCTGCCTCCTCAGTGCTGGGATTAAAAGCACATaGCACTGGTCAAAGATAGAATTTTTAATAATAAGCATTTCCAAA +
Preference number: 1 (lower is better)
Translates to: RPTCFCLLSAGIKST*HWSKIEFLIISISK
Trigger: TTTGGAAATGCTTATTATTAAAAATTCTATCTTTGACCAGTGGCATGTGCTTTTAATCCCAGCACTGAGGAGGCAGAAGCAGGTGGGTCT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000154604.8
3UTR-3UTR GCA 90 bp GAACCAAAGACCCCATCACTAAAACTCAACCAAAGGAGGCTCGAGTCCTTCAACGAAAGCAGTATCGGCTaGAGTGGAGCCATGGGACGA +
Preference number: 2 (lower is better)
Translates to: EPKTPSLKLNQRRLESFNESSIG*SGAMGR
Trigger: TCGTCCCATGGCTCCACTGCAGCCGATACTGCTTTC...GTTGAAGGACTCGAGCCTCCTTTGGTTGAGTTTTAGTGATGGGGTCTTTGGTTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000154604.8
3UTR-3UTR CCA 90 bp GGGGTTTCTCTGTGTAGTCCTGGCCATCCTGGAACTTGCTTTGTAGACCAGGCATTCATTAGCTTTTGCTaGGTCCAAGGACACAGCTGT +
Preference number: 2 (lower is better)
Translates to: GVSLCSPGHPGTCFVDQAFISFC*VQGHSC
Trigger: ACAGCTGTGTCCTTGGACCCAGCAAAAGCTAATGAA...TGCCTGGTCTACAAAGCAAGTTCCAGGATGGCCAGGACTACACAGAGAAACCCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000154604.8
3UTR-3UTR GCA 90 bp ATGTTTTGTGAGCATATTTCTGTGTACCACATGCCTGAGAAGAGCAGAAGAAGGCCAGGCAGGTTCTCATaGACAAGGGTCTCCCAGTCC +
Preference number: 2 (lower is better)
Translates to: MFCEHISVYHMPEKSRRRPGRFS*TRVSQS
Trigger: GGACTGGGAGACCCTTGTGCATGAGAACCTGCCTGG...CCTTCTTCTGCTCTTCTCAGGCATGTGGTACACAGAAATATGCTCACAAAACAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000154604.8
3UTR CAA 90 bp TTTTGCTGGGTCCAAGGACACAGCTGTCACCCACTGTACCTTCACTaGTCTTCAAAACTCATCAGGGCCTGGACTGCAAATTCTTGTAAC +
Preference number: 2 (lower is better)
Translates to: FCWVQGHSCHPLYLH*SSKLIRAWTANSCN
Trigger: GTTACAAGAATTTGCAGTCCAGGCCCTGATGAGTTTTGAAGACAAGTGAAGGTACAGTGGGTGACAGCTGTGTCCTTGGACCCAGCAAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000154604.8
3UTR CAA 90 bp TTTCAAGGAAAGCAGTATCGGCTGCAGTGGAGCCATGGGACGAGATaGAATGGGAAACTGGGTAGGCTTTTTCTTTTGACTCTTCAGCTT +
Preference number: 2 (lower is better)
Translates to: FQGKQYRLQWSHGTR*NGKLGRLFLLTLQL
Trigger: AAGCTGAAGAGTCAAAAGAAAAAGCCTACCCAGTTTCCCATTCAATCTCGTCCCATGGCTCCACTGCAGCCGATACTGCTTTCCTTGAAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000154604.8
3UTR-3UTR TCA 90 bp GCACTCTCAACCATCTCTGATCCAGACTGTTGGCTGGCTGTAGAACAGAAATATGTAGGCTTTTTCTTTTaGCTCTTCAGCTTCAGCTTG +
Preference number: 2 (lower is better)
Translates to: ALSTISDPDCWLAVEQKYVGFFF*LFSFSL
Trigger: CAAGCTGAAGCTGAAGAGTCAAAAGAAAAAGCCTAC...ATATTTCTGTTCTACAGCCAGCCAACAGTCTGGATCAGAGATGGTTGAGAGTGC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000154604.8
3UTR-3UTR CCA 90 bp TCCAAAGAATTAAATAATATGCTTGGCATGCAGTCCTATGACTCAGGAGGCTGCTGGAACAAACAGACATaGAAACGTCCCTGGTCAATG +
Preference number: 2 (lower is better)
Translates to: SKELNNMLGMQSYDSGGCWNKQT*KRPWSM
Trigger: CATTGACCAGGGACGTTTCCATGTCTGTTTGTTCCA...GCAGCCTCCTGAGTCATAGGACTGCATGCCAAGCATATTATTTAATTCTTTGGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000154604.8
3UTR-3UTR CCA 90 bp ACTACTGAGCCATCTCCTCAGCTCAGGTTAATAGAATTATTTGGGGTCGGGGAGAGGTCTCATAAACACTaGAACAAACAGACATGGAAA +
Preference number: 2 (lower is better)
Translates to: TTEPSPQLRLIELFGVGERSHKH*NKQTWK
Trigger: TTTCCATGTCTGTTTGTTCCAGTGTTTATGAGACCT...CTCCCCGACCCCAAATAATTCTATTAACCTGAGCTGAGGAGATGGCTCAGTAGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000154604.8
3UTR-3UTR CCA 90 bp ATGTTTTGTGAGCATATTTCTGTGTACCACATGCCTGAGAAGAGCAGAAGAAGGCAGGATAGCTTTTCTTaGCATAGTCTTTCTCAGGAT +
Preference number: 2 (lower is better)
Translates to: MFCEHISVYHMPEKSRRRQDSFS*HSLSQD
Trigger: ATCCTGAGAAAGACTATGCCAAGAAAAGCTATCCTG...CCTTCTTCTGCTCTTCTCAGGCATGTGGTACACAGAAATATGCTCACAAAACAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000154604.8
3UTR CCA 72 bp CCACTAAGCATCAGCTTCATAGTCAACCCTTCAGGATaGGGCTTCCTGCTGGGGGCTATAGCACAGTGGTGG +
Preference number: 3 (lower is better)
Translates to: PLSISFIVNPSG*GFLLGAIAQWW
Trigger: CCACCACTGTGCTATAGCCCCCAGCAGGAAGCCCCATCCTGAAGGGTTGACTATGAAGCTGATGCTTAGTGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000154604.8
3UTR TCA 72 bp GCATTGAATCCCTGGAACTGGGGTTATAGGCAGTTGTaGGTCACCATGTGGGTTCTGGGAACTGAACCTGGG +
Preference number: 3 (lower is better)
Translates to: ALNPWNWGYRQL*VTMWVLGTEPG
Trigger: CCCAGGTTCAGTTCCCAGAACCCACATGGTGACTCACAACTGCCTATAACCCCAGTTCCAGGGATTCAATGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000154604.8
3UTR GCA 72 bp AGGCAGGTTTCAAACACACAGAGACCCACCTGCTTCTaGCTCCTCAGTGCTGGGATTAAAAGCACATGCCAC +
Preference number: 3 (lower is better)
Translates to: RQVSNTQRPTCF*LLSAGIKSTCH
Trigger: GTGGCATGTGCTTTTAATCCCAGCACTGAGGAGGCAGAAGCAGGTGGGTCTCTGTGTGTTTGAAACCTGCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000154604.8
3UTR GCA 72 bp GGGGTTTCTCTGTGTAGTCCTGGCCATCCTGGAACTTaGTTTGTAGACCAGGCAGGTTTCAAACACACAGAG +
Preference number: 3 (lower is better)
Translates to: GVSLCSPGHPGT*FVDQAGFKHTE
Trigger: CTCTGTGTGTTTGAAACCTGCCTGGTCTACAAAGCAAGTTCCAGGATGGCCAGGACTACACAGAGAAACCCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000154604.8
3UTR CCA 72 bp AGTCCAGGTTTTCAAGGAAAGCAGTATCGGCTGCAGTaGAGCCATGGGACGAGATTGAATGGGAAACTGGGT +
Preference number: 3 (lower is better)
Translates to: SPGFQGKQYRLQ*SHGTRLNGKLG
Trigger: ACCCAGTTTCCCATTCAATCTCGTCCCATGGCTCCACTGCAGCCGATACTGCTTTCCTTGAAAACCTGGACT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000154604.8
3UTR TCA 72 bp AGCGCTCCAACCTTTAGGTCCAGAAGTGGGCGTGAATaGTATGTATTTGCAGTTAATAGTGCCCGGGAGCAC +
Preference number: 3 (lower is better)
Translates to: SAPTFRSRSGRE*YVFAVNSAREH
Trigger: GTGCTCCCGGGCACTATTAACTGCAAATACATATCATTCACGCCCACTTCTGGACCTAAAGGTTGGAGCGCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000154604.8
3UTR TCA 72 bp CAGTTAATAGTGCCCGGGAGCACTCTCAACCATCTCTaGTCCAGACTGTTGGCTGGCTGTAGAACAGAAATA +
Preference number: 3 (lower is better)
Translates to: QLIVPGSTLNHL*SRLLAGCRTEI
Trigger: TATTTCTGTTCTACAGCCAGCCAACAGTCTGGATCAGAGATGGTTGAGAGTGCTCCCGGGCACTATTAACTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000154604.8
3UTR CCA 72 bp GGGGGCTATAGCACAGTGGTGGGATGCATGAAGATATaGGGTTCATCACCAGTAGCATACGCAAACAAAAAG +
Preference number: 3 (lower is better)
Translates to: GGYSTVVGCMKI*GSSPVAYANKK
Trigger: CTTTTTGTTTGCGTATGCTACTGGTGATGAACCCCATATCTTCATGCATCCCACCACTGTGCTATAGCCCCC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENSMUST00000154604.8
3UTR CCA 72 bp CCGGGAGCACTCTCAACCATCTCTGATCCAGACTGTTaGCTGGCTGTAGAACAGAAATATTCATTAGCAGTA +
Preference number: 3 (lower is better)
Translates to: PGALSTISDPDC*LAVEQKYSLAV
Trigger: TACTGCTAATGAATATTTCTGTTCTACAGCCAGCCAACAGTCTGGATCAGAGATGGTTGAGAGTGCTCCCGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000154604.8
3UTR CCA 72 bp CATAAACACTGGAACAAACAGACATGGAAACGTCCCTaGTCAATGACAAGTGAGATGAAGAGCGCTCCAACC +
Preference number: 3 (lower is better)
Translates to: HKHWNKQTWKRP*SMTSEMKSAPT
Trigger: GGTTGGAGCGCTCTTCATCTCACTTGTCATTGACCAGGGACGTTTCCATGTCTGTTTGTTCCAGTGTTTATG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000154604.8
3UTR CCA 72 bp TTTCTGAGGTCTCATAAACACTGGAACAAACAGACATaGAAACGTCCCTGGTCAATGACAAGTGAGATGAAG +
Preference number: 3 (lower is better)
Translates to: FLRSHKHWNKQT*KRPWSMTSEMK
Trigger: CTTCATCTCACTTGTCATTGACCAGGGACGTTTCCATGTCTGTTTGTTCCAGTGTTTATGAGACCTCAGAAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000154604.8
3UTR TCA 72 bp GGGTCCTCTATAAGAGCAGCAAGTGTACTTTACTACTaGGCCATCTCCTCAGCTCAGGTTAATAGAATTATT +
Preference number: 3 (lower is better)
Translates to: GSSIRAASVLYY*AISSAQVNRII
Trigger: AATAATTCTATTAACCTGAGCTGAGGAGATGGCTCAGTAGTAAAGTACACTTGCTGCTCTTATAGAGGACCC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000154604.8
3UTR GCA 72 bp TGCTTCTGCCTCCTCAGTGCTGGGATTAAAAGCACATaGCACTGGTCAAAGATAGAATTTTTAATAATAAGC +
Preference number: 3 (lower is better)
Translates to: CFCLLSAGIKST*HWSKIEFLIIS
Trigger: GCTTATTATTAAAAATTCTATCTTTGACCAGTGGCATGTGCTTTTAATCCCAGCACTGAGGAGGCAGAAGCA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000154604.8
CDS-3UTR TCA 90 bp GTTCAGGGCCAGCTTGCGCTACACAGTAAGTCTGAGGCCAGCCTCAGGGAGAACCCTGATCTCCTGACATaGGTTTCTGCTGGTAAGAAG +
Preference number: 4 (lower is better)
Translates to: VQGQLALHSKSEASLRENPDLLT*VSAGKK
Trigger: CTTCTTACCAGCAGAAACTCATGTCAGGAGATCAGG...GTTCTCCCTGAGGCTGGCCTCAGACTTACTGTGTAGCGCAAGCTGGCCCTGAAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000154604.8
3UTR CAA 72 bp GTCCAAGGACACAGCTGTCACCCACTGTACCTTCACTaGTCTTCAAAACTCATCAGGGCCTGGACTGCAAAT +
Preference number: 4 (lower is better)
Translates to: VQGHSCHPLYLH*SSKLIRAWTAN
Trigger: ATTTGCAGTCCAGGCCCTGATGAGTTTTGAAGACAAGTGAAGGTACAGTGGGTGACAGCTGTGTCCTTGGAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000154604.8
3UTR CAA 72 bp AAGCAGTATCGGCTGCAGTGGAGCCATGGGACGAGATaGAATGGGAAACTGGGTAGGCTTTTTCTTTTGACT +
Preference number: 4 (lower is better)
Translates to: KQYRLQWSHGTR*NGKLGRLFLLT
Trigger: AGTCAAAAGAAAAAGCCTACCCAGTTTCCCATTCAATCTCGTCCCATGGCTCCACTGCAGCCGATACTGCTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000154604.8
CDS-3UTR GCA 90 bp CTCAGGATCAATTTTCTCGCTCTCGCTATTCTCACTCTCACTATTCTCACTATCCTCAAGCCCTGCAAATaGTCTATGAGCGAGAAAGTG +
Preference number: 4 (lower is better)
Translates to: LRINFLALAILTLTILTILKPCK*SMSEKV
Trigger: CACTTTCTCGCTCATAGAGCATTTGCAGGGCTTGAG...GATAGTGAGAATAGTGAGAGTGAGAATAGCGAGAGCGAGAAAATTGATCCTGAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000154604.8
CDS-3UTR CCA 90 bp CTCAGGATCAATTTTCTCGCTCTCGCTATTCTCACTCTCACTATTCTCACTATCTCAGCTCTGAGCAGCTaGAAATGTCCTTGTTCTTGT +
Preference number: 4 (lower is better)
Translates to: LRINFLALAILTLTILTISALSS*KCPCSC
Trigger: ACAAGAACAAGGACATTTCCAGCTGCTCAGAGCTGA...GATAGTGAGAATAGTGAGAGTGAGAATAGCGAGAGCGAGAAAATTGATCCTGAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000154604.8
3UTR CAA 72 bp ACGAGATTGAATGGGAAACTGGGTAGGCTTTTTCTTTaGACTCTTCAGCTTCAGCTTGTTCATCATAGCTTT +
Preference number: 4 (lower is better)
Translates to: TRLNGKLGRLFL*TLQLQLVHHSF
Trigger: AAAGCTATGATGAACAAGCTGAAGCTGAAGAGTCAAAAGAAAAAGCCTACCCAGTTTCCCATTCAATCTCGT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000154604.8
CDS GCA 90 bp TCTTCGGAGACCTTTCCAAGACTGGTCCCTCTTAGTGATTCAGAGTaGTGTCTCCTCTGGATAATCTGTTGCTTGAACATGTCAGCTTTA +
Preference number: 5 (lower is better)
Translates to: SSETFPRLVPLSDSE*CLLWIICCLNMSAL
Trigger: TAAAGCTGACATGTTCAAGCAACAGATTATCCAGAGGAGACAGCACTCTGAATCACTAAGAGGGACCAGTCTTGGAAAGGTCTCCGAAGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000038073.5
CDS GCA 72 bp TATCTCTACAATGAAGCTAAGCAAGATGAACCAATCTaGCACCTCCAAAGCCAGCTTCACTGGCCACAGAGC +
Preference number: 6 (lower is better)
Translates to: YLYNEAKQDEPI*HLQSQLHWPQS
Trigger: GCTCTGTGGCCAGTGAAGCTGGCTTTGGAGGTGGCAGATTGGTTCATCTTGCTTAGCTTCATTGTAGAGATA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000038073.5
CDS TCA 72 bp CGAGAAGAACATGTTGTACTCCAGGCCCTCGATAGTTaGTCGGGAATATTCTCTGAAGAAGTAGACACCAGT +
Preference number: 6 (lower is better)
Translates to: REEHVVLQALDS*SGIFSEEVDTS
Trigger: ACTGGTGTCTACTTCTTCAGAGAATATTCCCGATCAACTATCGAGGGCCTGGAGTACAACATGTTCTTCTCG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000038073.5
CDS GCA 72 bp ACCTTTCCAAGACTGGTCCCTCTTAGTGATTCAGAGTaGTGTCTCCTCTGGATAATCTGTTGCTTGAACATG +
Preference number: 6 (lower is better)
Translates to: TFPRLVPLSDSE*CLLWIICCLNM
Trigger: CATGTTCAAGCAACAGATTATCCAGAGGAGACAGCACTCTGAATCACTAAGAGGGACCAGTCTTGGAAAGGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000038073.5
CDS CAA 72 bp GTCACCAGTGAATTTAGTAGGTCCGAGAAGAACATGTaGTACTCCAGGCCCTCGATAGTTGATCGGGAATAT +
Preference number: 6 (lower is better)
Translates to: VTSEFSRSEKNM*YSRPSIVDREY
Trigger: ATATTCCCGATCAACTATCGAGGGCCTGGAGTACAACATGTTCTTCTCGGACCTACTAAATTCACTGGTGAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000038073.5
CDS CCA 72 bp AAGTTTCTATTATGTCTTCGGAGACCTTTCCAAGACTaGTCCCTCTTAGTGATTCAGAGTGCTGTCTCCTCT +
Preference number: 6 (lower is better)
Translates to: KFLLCLRRPFQD*SLLVIQSAVSS
Trigger: AGAGGAGACAGCACTCTGAATCACTAAGAGGGACCAGTCTTGGAAAGGTCTCCGAAGACATAATAGAAACTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000038073.5